BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048269
(465 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225423476|ref|XP_002274259.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g26500-like [Vitis vinifera]
Length = 525
Score = 728 bits (1880), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/463 (72%), Positives = 396/463 (85%), Gaps = 1/463 (0%)
Query: 3 VDPGHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQY 62
V+P HL+RVCT+LYQQQ SPE RL + L +C F+LTHEFFLQ+CN FPLSWRPVY FF++
Sbjct: 36 VNPNHLLRVCTVLYQQQNSPEVRLQTHLRACEFHLTHEFFLQVCNKFPLSWRPVYKFFEF 95
Query: 63 TQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVR 122
T+ QPCF HNS+TFN+MVD+IG+SRNI LFWE LQEMGRRRL NDKTF IAL TLA +R
Sbjct: 96 TE-TQPCFHHNSVTFNKMVDVIGRSRNIKLFWEVLQEMGRRRLANDKTFVIALKTLASIR 154
Query: 123 ELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGW 182
E+KK V FFH+MN YSLE LNKVV+ LC+ KL VEAK ++LKL WI P+ + YG+
Sbjct: 155 EMKKCVEFFHLMNAHEYGYSLETLNKVVEVLCRSKLAVEAKEIVLKLKTWIPPSGVTYGY 214
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
LIKG+C+VGDLIEA+ +W+LM DEGF P ID V+KM+ET F IN+ DEAMK+FQ +R R
Sbjct: 215 LIKGFCEVGDLIEAANVWDLMVDEGFRPGIDAVEKMMETLFNINRFDEAMKLFQAVRTTR 274
Query: 243 MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
D+L LSTY +VIDWMCKRGK+SQAY + EEM KRGI+ DN T+SS+IYGLLA+GR+REA
Sbjct: 275 FDELVLSTYSLVIDWMCKRGKVSQAYMVFEEMLKRGIQPDNKTMSSLIYGLLAKGRVREA 334
Query: 303 YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
K+ E IE+PDI++YHG+IKGLLRLR+A EATQVFREMI+RGCEPTMHTYIMLLQGHLGK
Sbjct: 335 NKITEGIERPDIAVYHGVIKGLLRLRKAGEATQVFREMIRRGCEPTMHTYIMLLQGHLGK 394
Query: 363 RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEG 422
+GRKGP PLVNFD+IFVGGL+K GKSLDA+KYVER+M+ G+EVPRFDYN+FLH YSNEEG
Sbjct: 395 KGRKGPHPLVNFDSIFVGGLIKVGKSLDASKYVERMMDGGMEVPRFDYNRFLHCYSNEEG 454
Query: 423 VVMFEEVGKKLREVGLADLADIFQRYGKKMATRERRRNRAIEP 465
V MFEEVGKKLREVGL DLADIF RYG+KMATR+RRRNR EP
Sbjct: 455 VFMFEEVGKKLREVGLVDLADIFLRYGEKMATRDRRRNRVAEP 497
>gi|297738085|emb|CBI27286.3| unnamed protein product [Vitis vinifera]
Length = 523
Score = 728 bits (1879), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/463 (72%), Positives = 396/463 (85%), Gaps = 1/463 (0%)
Query: 3 VDPGHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQY 62
V+P HL+RVCT+LYQQQ SPE RL + L +C F+LTHEFFLQ+CN FPLSWRPVY FF++
Sbjct: 34 VNPNHLLRVCTVLYQQQNSPEVRLQTHLRACEFHLTHEFFLQVCNKFPLSWRPVYKFFEF 93
Query: 63 TQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVR 122
T+ QPCF HNS+TFN+MVD+IG+SRNI LFWE LQEMGRRRL NDKTF IAL TLA +R
Sbjct: 94 TE-TQPCFHHNSVTFNKMVDVIGRSRNIKLFWEVLQEMGRRRLANDKTFVIALKTLASIR 152
Query: 123 ELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGW 182
E+KK V FFH+MN YSLE LNKVV+ LC+ KL VEAK ++LKL WI P+ + YG+
Sbjct: 153 EMKKCVEFFHLMNAHEYGYSLETLNKVVEVLCRSKLAVEAKEIVLKLKTWIPPSGVTYGY 212
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
LIKG+C+VGDLIEA+ +W+LM DEGF P ID V+KM+ET F IN+ DEAMK+FQ +R R
Sbjct: 213 LIKGFCEVGDLIEAANVWDLMVDEGFRPGIDAVEKMMETLFNINRFDEAMKLFQAVRTTR 272
Query: 243 MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
D+L LSTY +VIDWMCKRGK+SQAY + EEM KRGI+ DN T+SS+IYGLLA+GR+REA
Sbjct: 273 FDELVLSTYSLVIDWMCKRGKVSQAYMVFEEMLKRGIQPDNKTMSSLIYGLLAKGRVREA 332
Query: 303 YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
K+ E IE+PDI++YHG+IKGLLRLR+A EATQVFREMI+RGCEPTMHTYIMLLQGHLGK
Sbjct: 333 NKITEGIERPDIAVYHGVIKGLLRLRKAGEATQVFREMIRRGCEPTMHTYIMLLQGHLGK 392
Query: 363 RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEG 422
+GRKGP PLVNFD+IFVGGL+K GKSLDA+KYVER+M+ G+EVPRFDYN+FLH YSNEEG
Sbjct: 393 KGRKGPHPLVNFDSIFVGGLIKVGKSLDASKYVERMMDGGMEVPRFDYNRFLHCYSNEEG 452
Query: 423 VVMFEEVGKKLREVGLADLADIFQRYGKKMATRERRRNRAIEP 465
V MFEEVGKKLREVGL DLADIF RYG+KMATR+RRRNR EP
Sbjct: 453 VFMFEEVGKKLREVGLVDLADIFLRYGEKMATRDRRRNRVAEP 495
>gi|449453031|ref|XP_004144262.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g26500-like [Cucumis sativus]
Length = 505
Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/462 (68%), Positives = 381/462 (82%), Gaps = 1/462 (0%)
Query: 2 PVDPGHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQ 61
P+D HL RVCT+LYQQQ SP+ +LH+ L +CNFNL+HEFFLQ+CN FPLSWRPVY FFQ
Sbjct: 41 PIDSTHLRRVCTVLYQQQNSPDLKLHTKLLACNFNLSHEFFLQVCNTFPLSWRPVYRFFQ 100
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEV 121
+T+ P F H +++FN+++D++GKSRNIDL W +QEMGRRRLVNDKTF +AL TLA
Sbjct: 101 FTE-THPNFTHTAVSFNKLIDVVGKSRNIDLLWGLIQEMGRRRLVNDKTFVVALRTLATA 159
Query: 122 RELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYG 181
RELKK V FFH+MN G YSL LN+VV+ LC KLV EAK+L++KL+EWIK + + Y
Sbjct: 160 RELKKCVEFFHLMNGYGFCYSLVTLNRVVEKLCGCKLVDEAKFLVMKLNEWIKADGVTYK 219
Query: 182 WLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK 241
LIKG+C+VGDLIEASK+WNLM DEGFEP ++ V++M+ FK NK DEA+K+FQ +R
Sbjct: 220 LLIKGFCNVGDLIEASKMWNLMVDEGFEPEMEAVEEMMNVLFKTNKLDEALKLFQALRSD 279
Query: 242 RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
RM+DL STY +VI W+C +GK+ QA+ + +EM KRG+E DN SS+IYGLLARGR RE
Sbjct: 280 RMNDLIPSTYSLVIRWLCNKGKVGQAFIVFDEMHKRGLEVDNSVHSSLIYGLLARGRRRE 339
Query: 302 AYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG 361
AY ++ IE PD+ +YH IKGLL+L+RA EATQVFREMI+RGCEP MHTYIMLLQGHLG
Sbjct: 340 AYNIMRRIENPDLDVYHAFIKGLLKLKRANEATQVFREMIERGCEPIMHTYIMLLQGHLG 399
Query: 362 KRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEE 421
KRGRKG DPLVNFD+IFVGGLVK GKSL+A KYVER+M RG+EVPRFDYNKFLHYYSNEE
Sbjct: 400 KRGRKGSDPLVNFDSIFVGGLVKNGKSLEATKYVERLMKRGLEVPRFDYNKFLHYYSNEE 459
Query: 422 GVVMFEEVGKKLREVGLADLADIFQRYGKKMATRERRRNRAI 463
GVVMF EVG KLREVGL DLADIFQRYG+KM TR+RRRNRA+
Sbjct: 460 GVVMFREVGNKLREVGLVDLADIFQRYGEKMTTRDRRRNRAV 501
>gi|224138618|ref|XP_002322859.1| predicted protein [Populus trichocarpa]
gi|222867489|gb|EEF04620.1| predicted protein [Populus trichocarpa]
Length = 502
Score = 682 bits (1761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/456 (69%), Positives = 378/456 (82%), Gaps = 3/456 (0%)
Query: 1 APVDPGHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFF 60
+PV+ HL+RVCT+L+QQQ S + +L + LSS +FNLTHEFFLQ+CN FP SWRPV+ FF
Sbjct: 33 SPVNEDHLLRVCTVLFQQQDSSDFKLRNKLSSIDFNLTHEFFLQVCNKFPASWRPVHRFF 92
Query: 61 QYTQKAQPC--FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTL 118
QYTQ+ PC F H S++ N+M+DI G+SRN+DL W +QEM +R LVNDKTF I L L
Sbjct: 93 QYTQQ-MPCSRFTHTSVSLNKMLDIFGRSRNLDLLWGAVQEMAKRGLVNDKTFIIVLKAL 151
Query: 119 AEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEI 178
A RELKK FFH MN+ GCEY +E LNKVV+ LC+ KLV EAK+++LKL +WI+P+ +
Sbjct: 152 ASARELKKCAEFFHFMNEHGCEYRVERLNKVVENLCKGKLVEEAKFVVLKLKDWIRPDGV 211
Query: 179 AYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
YGWL+KG+CDVG+LIEASKIWNLM DE EP I+V +KM+ET FK N+ DEA+KVFQ M
Sbjct: 212 TYGWLVKGFCDVGELIEASKIWNLMVDESIEPEIEVFEKMMETLFKRNEYDEALKVFQTM 271
Query: 239 RVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR 298
RV RMDDL LSTYR+VIDWMC++GK+ QA + +EM +RGI+ADN TL S++YGLL RGR
Sbjct: 272 RVNRMDDLALSTYRLVIDWMCRKGKVVQAQMVFDEMRQRGIQADNSTLGSLVYGLLTRGR 331
Query: 299 LREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
EA+KVVE IEK DIS+YHGLIKGL+R RRA EATQVFREMI RGCEPTMHTYIMLLQG
Sbjct: 332 HAEAHKVVERIEKTDISVYHGLIKGLVRSRRASEATQVFREMINRGCEPTMHTYIMLLQG 391
Query: 359 HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYS 418
HLGKRGRKGPDPLVNF++IFVGGL+KAGKSL+A KYVER M +EVPRFDYNKFLHYYS
Sbjct: 392 HLGKRGRKGPDPLVNFESIFVGGLIKAGKSLEATKYVERTMKGSLEVPRFDYNKFLHYYS 451
Query: 419 NEEGVVMFEEVGKKLREVGLADLADIFQRYGKKMAT 454
+EEGVVMF+EVGKKLRE G DLADI QRYG+KMAT
Sbjct: 452 SEEGVVMFKEVGKKLREAGFVDLADILQRYGEKMAT 487
>gi|357487519|ref|XP_003614047.1| hypothetical protein MTR_5g044120 [Medicago truncatula]
gi|355515382|gb|AES97005.1| hypothetical protein MTR_5g044120 [Medicago truncatula]
Length = 507
Score = 669 bits (1725), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/462 (67%), Positives = 381/462 (82%), Gaps = 1/462 (0%)
Query: 1 APVDPGHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFF 60
PV+ L++VCTILYQQQ SP+SRLHS L+S NFNLTHEFFLQ+CNNFP SWRPVY FF
Sbjct: 30 TPVNREELLKVCTILYQQQNSPDSRLHSKLTSSNFNLTHEFFLQVCNNFPYSWRPVYRFF 89
Query: 61 QYTQKAQ-PCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLA 119
+TQ+ + F H ++FN+M+D++ KSRNIDLFW + E RR LVN+KTF I L TL
Sbjct: 90 LFTQQEKNSSFTHTHVSFNKMLDVVAKSRNIDLFWSLVNETARRGLVNNKTFVIGLKTLG 149
Query: 120 EVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIA 179
RELKK V FFH+MN G YS+E LNKVV+ +C+ KLV EAK+++ K+ + IK + ++
Sbjct: 150 GARELKKCVEFFHLMNLNGYGYSVERLNKVVEEMCKVKLVEEAKFVVFKMKDLIKLDGVS 209
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
Y WLI G+C+ GDLIEASKIWNLM DEGF P +DVV+ +ETFFK+N+ E +K+FQ MR
Sbjct: 210 YKWLISGFCEKGDLIEASKIWNLMVDEGFVPDVDVVENFMETFFKVNQFGEGLKLFQTMR 269
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
+KRMD+LG+STYR+VI W+CK+G + A+ + +EM +RGI D+LTL ++YGLLA+ R+
Sbjct: 270 LKRMDELGVSTYRVVIKWLCKKGMMDNAHEVFDEMCERGIRVDSLTLGYVVYGLLAKHRV 329
Query: 300 REAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
REAY++VE+I+ DIS+YHGLIKGLL+LRRA EATQVFREMIKRGCEPTMHTYIMLLQGH
Sbjct: 330 REAYQIVEKIDVVDISVYHGLIKGLLKLRRASEATQVFREMIKRGCEPTMHTYIMLLQGH 389
Query: 360 LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN 419
LG+RGRKG DPLVNFD+IFVGG+VK G S +A KYVERVMNRG+EVPRFDYNKFLHY+SN
Sbjct: 390 LGRRGRKGTDPLVNFDSIFVGGMVKVGHSKEAIKYVERVMNRGMEVPRFDYNKFLHYFSN 449
Query: 420 EEGVVMFEEVGKKLREVGLADLADIFQRYGKKMATRERRRNR 461
EEG VMFEEV KKLREVGL DLADI +RYG+KM+TR+RRRNR
Sbjct: 450 EEGAVMFEEVAKKLREVGLVDLADILERYGQKMSTRDRRRNR 491
>gi|356497975|ref|XP_003517831.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g26500-like [Glycine max]
Length = 494
Score = 668 bits (1723), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/462 (66%), Positives = 381/462 (82%), Gaps = 1/462 (0%)
Query: 1 APVDPGHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFF 60
+PV+P HL+RVCTILYQQQ SPE RL S L+S F LTHEFFLQ+CN FP SWRPVY FF
Sbjct: 29 SPVNPDHLLRVCTILYQQQNSPEPRLTSKLASSEFQLTHEFFLQVCNKFPYSWRPVYRFF 88
Query: 61 QYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAE 120
YTQ + P F H+ ++FN+M+D++GKSRNIDLFW+ L +M RR VNDKTF IAL TL
Sbjct: 89 LYTQ-SLPHFTHSPVSFNKMLDVVGKSRNIDLFWDLLNDMARRHFVNDKTFVIALRTLGG 147
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAY 180
RELKK V FFH+MN GCEY+L LNKVV+ +C+ +LV EAK+++ KL E ++P+ + Y
Sbjct: 148 ARELKKCVEFFHLMNSNGCEYNLGTLNKVVEAMCKSRLVDEAKFVVFKLRECVRPDGVTY 207
Query: 181 GWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
LI GYCD GDL+ ASK+WNLM DEGFE +D V+KM+ETFFK+N+ EA+++F+ MR
Sbjct: 208 KNLIIGYCDKGDLVGASKVWNLMEDEGFEADVDAVEKMMETFFKVNEYGEALRLFETMRF 267
Query: 241 KRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
KRM++LG STY +VI W+CK+G +++A+ + EEM +RG+ ++ TL ++YGLL R R+R
Sbjct: 268 KRMNELGASTYGLVIRWLCKKGMMARAHEVFEEMRERGVRVNDSTLGDVVYGLLTRRRVR 327
Query: 301 EAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL 360
EAY+V E IE PD+ +YHG IKGLL+LRRA EATQVFREMI+RGCEPTMHTYIMLLQGHL
Sbjct: 328 EAYRVFEGIEVPDLCVYHGFIKGLLKLRRAGEATQVFREMIRRGCEPTMHTYIMLLQGHL 387
Query: 361 GKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE 420
G+RGRKG DPLVNFDTIFVGG+VKAGKS +A KYVERV+NRG+EVPRFDYNKFLHY+SNE
Sbjct: 388 GRRGRKGTDPLVNFDTIFVGGMVKAGKSKEATKYVERVLNRGMEVPRFDYNKFLHYFSNE 447
Query: 421 EGVVMFEEVGKKLREVGLADLADIFQRYGKKMATRERRRNRA 462
EGV MFE+VGKKLREVGL DLADI RYG+KMATR+RRR+R+
Sbjct: 448 EGVHMFEDVGKKLREVGLVDLADILDRYGQKMATRDRRRDRS 489
>gi|15222719|ref|NP_173972.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75263259|sp|Q9FZD4.1|PPR59_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g26500
gi|9797751|gb|AAF98569.1|AC013427_12 Contains similarity to a hypothetical protein T12C14_170 gi|7340718
from Arabidopsis thaliana BAC T12C14 gb|AL162507 and
contains multiple PPR PF|01535 repeats [Arabidopsis
thaliana]
gi|332192576|gb|AEE30697.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 505
Score = 630 bits (1624), Expect = e-178, Method: Compositional matrix adjust.
Identities = 294/452 (65%), Positives = 364/452 (80%)
Query: 1 APVDPGHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFF 60
P++ HL+RVCTILYQQQ SP+SRL S LSS F LTHEFFLQ+CNNFPLSWRPV+ FF
Sbjct: 39 TPINQDHLLRVCTILYQQQNSPDSRLVSKLSSTKFQLTHEFFLQVCNNFPLSWRPVHRFF 98
Query: 61 QYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAE 120
Y+Q P F H S T N+M+ IIG SRN+DLFWE QE+G+R LVNDKTF+I L TLA
Sbjct: 99 LYSQTHHPDFTHTSTTSNKMLAIIGNSRNMDLFWELAQEIGKRGLVNDKTFRIVLKTLAS 158
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAY 180
RELKK VN+FH+MN G Y++E +N+ V+TLC+ KLV EAK++ +KL E+IKP+EI Y
Sbjct: 159 ARELKKCVNYFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKLKEFIKPDEITY 218
Query: 181 GWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
+I+G+CDVGDLIEA+K+WNLM DEGF+ I+ K++ET K N+ DEA KVF +M
Sbjct: 219 RTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVS 278
Query: 241 KRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
KR DL YR++IDW+CK G+I A + +EM +RG+ DNLT +S+IYGLL + R+
Sbjct: 279 KRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKRRVV 338
Query: 301 EAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL 360
EAY +VE +E PDIS+YHGLIKGL++++RA EAT+VFR+MI+RGCEP MHTY+MLLQGHL
Sbjct: 339 EAYGLVEGVENPDISIYHGLIKGLVKIKRASEATEVFRKMIQRGCEPIMHTYLMLLQGHL 398
Query: 361 GKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE 420
G+RGRKGPDPLVNFDTIFVGG++KAGK L+ KY+ER + RG+EVPRFDY+KFLHYYSNE
Sbjct: 399 GRRGRKGPDPLVNFDTIFVGGMIKAGKRLETTKYIERTLKRGLEVPRFDYSKFLHYYSNE 458
Query: 421 EGVVMFEEVGKKLREVGLADLADIFQRYGKKM 452
EGVVMFEE+ KKLREV L DLADIFQRYG+KM
Sbjct: 459 EGVVMFEEMAKKLREVSLFDLADIFQRYGEKM 490
>gi|297851040|ref|XP_002893401.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339243|gb|EFH69660.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 500
Score = 627 bits (1617), Expect = e-177, Method: Compositional matrix adjust.
Identities = 294/452 (65%), Positives = 363/452 (80%)
Query: 1 APVDPGHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFF 60
P++ HL+RVCTILYQQQ SP+SRL S LSS F LTHEFFLQ+CNNFPLSWRPV+ FF
Sbjct: 39 TPINQDHLLRVCTILYQQQNSPDSRLVSKLSSTKFQLTHEFFLQVCNNFPLSWRPVHRFF 98
Query: 61 QYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAE 120
Y+Q P F H S T N+M+ IIG SRN+DLFWE QE+G+ LVNDKTF+I L TLA
Sbjct: 99 LYSQIHHPDFVHTSTTSNKMLAIIGNSRNMDLFWELAQEIGKHGLVNDKTFRIVLKTLAS 158
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAY 180
RELKK VNFFH+MND G Y+++ +N+ V+TLC+ KLV EAK++++KL E+IKP+EI Y
Sbjct: 159 ARELKKCVNFFHLMNDFGYLYNVQTMNRGVETLCKEKLVEEAKFVVIKLREFIKPDEITY 218
Query: 181 GWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
+IKG+CDVGDLI+A+K+WNLM D+GFE I+ K++ETF K N+ DEA KVF +M
Sbjct: 219 RTMIKGFCDVGDLIKAAKLWNLMMDDGFEVDIEAGKKIMETFLKKNQFDEASKVFHVMVS 278
Query: 241 KRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
KR DL YR++IDW+CK G+I A + +EM +RG++ DNLT +SIIYGLL + R+
Sbjct: 279 KRGCDLDGCFYRVMIDWLCKNGRIDMARKVFDEMRERGVQVDNLTWASIIYGLLVKRRVA 338
Query: 301 EAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL 360
EAYK VE +E PDIS+YH LIKGL++++RA EAT+VFR+MI+RGCEP MHTY+MLLQGHL
Sbjct: 339 EAYKTVEAVENPDISIYHALIKGLVKIKRASEATEVFRKMIQRGCEPIMHTYLMLLQGHL 398
Query: 361 GKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE 420
G+RGRKGPDPLVNFDTIFVGG++KAGK L+ KYVER + RG+EV RFDY+KFLH YSNE
Sbjct: 399 GRRGRKGPDPLVNFDTIFVGGMIKAGKRLETTKYVERTLKRGLEVSRFDYSKFLHCYSNE 458
Query: 421 EGVVMFEEVGKKLREVGLADLADIFQRYGKKM 452
EGV MFEE+ KKLREV L DLADIFQRYG+KM
Sbjct: 459 EGVFMFEEMAKKLREVSLFDLADIFQRYGEKM 490
>gi|326491941|dbj|BAJ98195.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 513
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/465 (47%), Positives = 295/465 (63%), Gaps = 13/465 (2%)
Query: 3 VDPGHLVRVCTILYQQQYSPESRLHSSLSSCNFNLT----HEFFLQICNNFPLSWRPVYL 58
DP LVR+CTILYQQQ +P++ L LS+ E FLQ FPLSWRPV
Sbjct: 27 TDPALLVRLCTILYQQQNAPDAVLQRRLSALPLPSAPADLRELFLQASARFPLSWRPVQR 86
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTL 118
+ A+ FAH+ T R +D++ KS N+DL TL + L++D + A+ L
Sbjct: 87 LLAHLT-ARHGFAHSPATAARFLDVLAKSSNVDLLHSTLLAL-PTGLLSDAALRAAIRGL 144
Query: 119 AEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE---WIKP 175
A RE+ K+ + + L + VV ++C+ V E ++K +E + P
Sbjct: 145 APAREVGKVSALLTLFPEAQRPRVLAFVVDVVCSVCKLPDVAEK---VVKQAEHRYGLAP 201
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
L+ YC G +A +WN M G EP ++++ T FK N+ +AMKVF
Sbjct: 202 CGRCCDLLVVAYCRAGMFADACSVWNGMEKRGIEPGAAAYEEIVVTLFKNNRIPDAMKVF 261
Query: 236 QMMRVKRMD-DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
MR +R+ G + Y V+ W+CK G+ A+ +L EMFKRG+ D L ++YGLL
Sbjct: 262 DGMRKRRLSAGGGGACYHAVVSWLCKEGRTWSAFMVLAEMFKRGVGVDGEVLGDLVYGLL 321
Query: 295 ARGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIM 354
AR R+RE Y V +++ DI+LYHGL+KGL+R++RA EAT+VFREM+ GCEP MHTYIM
Sbjct: 322 ARRRVREGYSVFHGVKEKDIALYHGLMKGLVRIKRAGEATEVFREMVASGCEPNMHTYIM 381
Query: 355 LLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
LLQGHLGKRGRKG DPLVNF++IFVGGLVKAG++L+A K+VER M GV+VPRFDYNKFL
Sbjct: 382 LLQGHLGKRGRKGRDPLVNFESIFVGGLVKAGRTLEATKFVERTMWGGVDVPRFDYNKFL 441
Query: 415 HYYSNEEGVVMFEEVGKKLREVGLADLADIFQRYGKKMATRERRR 459
HY+SN+EGV MFEEVG++LRE G DL DIF YG++MATR++RR
Sbjct: 442 HYFSNDEGVAMFEEVGRRLRETGHVDLGDIFLTYGERMATRDKRR 486
>gi|357116472|ref|XP_003560005.1| PREDICTED: disease resistance protein RPM1-like [Brachypodium
distachyon]
Length = 1433
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/464 (48%), Positives = 290/464 (62%), Gaps = 7/464 (1%)
Query: 1 APVDPGHLVRVCTILYQQQYSPESRLHSSLSSCNFNLT----HEFFLQICNNFPLSWRPV 56
P DP LVR+CTILYQ Q++P++ L LS+ E FLQ FPLSWRPV
Sbjct: 4 GPTDPALLVRLCTILYQHQHAPDAALQRRLSALPIPAAPADLRELFLQATARFPLSWRPV 63
Query: 57 YLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALM 116
+ + AQ FAH+ T R +D++ KS N DL TL + L + A+
Sbjct: 64 HRLLAHL-TAQHGFAHSPATAARFLDVLAKSSNFDLLHSTLLALPPGLLSA-AALRAAIR 121
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPN 176
LA RE+ K+ + + LE + VV ++C+ V E + I N
Sbjct: 122 GLAPAREVGKVSALLALFPEAQRSRVLEFITDVVCSVCKLPDVAEKVIKQAEHRHSIARN 181
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
L+ YC G +A +WN M G EP ++++ T FK N+ +AMKVF
Sbjct: 182 GRCCELLVVAYCRAGMFADACSVWNGMEKRGIEPGGAAYEEIVVTLFKNNRFADAMKVFD 241
Query: 237 MMRVKRMDDLGLST-YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
MR + + G T Y V+ W+CK G+ A+ + EM K G+E D L ++YGLL+
Sbjct: 242 GMRKRGLSARGGGTCYHAVVSWLCKEGRTWCAFMVFAEMLKIGVEVDGEVLGDLVYGLLS 301
Query: 296 RGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
R R RE Y+V +++ DI+LYHGL+KGLLR++RAREAT+VFREM+ RGCEP MHTYIML
Sbjct: 302 RRRAREGYRVFHGVKEKDIALYHGLMKGLLRIKRAREATEVFREMVARGCEPNMHTYIML 361
Query: 356 LQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
LQGHLGKRGRKG DPLVNF++IFVGGLVKAG++L+A K+VER M GV+VPRFDYNKFLH
Sbjct: 362 LQGHLGKRGRKGRDPLVNFESIFVGGLVKAGRTLEATKFVERTMWGGVDVPRFDYNKFLH 421
Query: 416 YYSNEEGVVMFEEVGKKLREVGLADLADIFQRYGKKMATRERRR 459
Y+SNEEGV MFEEVG++LREVGL DL DI YG++MATR+RRR
Sbjct: 422 YFSNEEGVPMFEEVGRRLREVGLVDLGDILLIYGERMATRDRRR 465
>gi|125600971|gb|EAZ40547.1| hypothetical protein OsJ_25002 [Oryza sativa Japonica Group]
Length = 514
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/464 (46%), Positives = 291/464 (62%), Gaps = 26/464 (5%)
Query: 2 PVDPGHLVRVCTILYQQQYSPESRLHSSLS-----SCNFNLTHEFFLQICNNFPLSWRPV 56
P DP L+R+CT+LYQ Q++PE L LS S + E FLQ FPLSWRPV
Sbjct: 43 PTDPSLLLRLCTVLYQHQHAPEDALRRRLSALPLPSAAADDLRELFLQASARFPLSWRPV 102
Query: 57 YLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALM 116
+ A FAH+ T R +D++ KSRN+DL TL L + + A+
Sbjct: 103 RRLLDHLTAAHG-FAHSPATAARFLDVLAKSRNVDLLHSTLLSF-PPALRSLAALRAAIR 160
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPN 176
LA RE+ K+ + + D +L + VV ++C+ V E + IK
Sbjct: 161 GLAPAREVGKVSSLLALFPDADRPRTLNFITDVVCSVCKLPDVAE---------KVIKQA 211
Query: 177 EIAYG---------WLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINK 227
E YG L+ GYC G L +A ++WN M G +P ++++ T FK N+
Sbjct: 212 EHRYGVSRTGRCCELLVVGYCRAGMLSDACRVWNGMERRGLDPGAAAYEEIVVTLFKNNR 271
Query: 228 DDEAMKVFQMMRVKRMDDLGLS-TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTL 286
+AMKVF MR + + D G YR V+ W+CK G++ AY + EMFKRG+E D +
Sbjct: 272 VADAMKVFDGMRRRGVSDGGRGGCYRAVVSWLCKEGRMWGAYMVFAEMFKRGVEVDGEVM 331
Query: 287 SSIIYGLLARGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
++YGLL R R+RE Y+V +++ DI+LYHGL+KGL+R++RAREAT+VFREM+ GCE
Sbjct: 332 GDLVYGLLVRRRVREGYRVFHGVKEKDIALYHGLMKGLIRIKRAREATEVFREMVATGCE 391
Query: 347 PTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
P MHTYIMLLQGHLGKRGRKG DPLVNF++IFVGGLVKAG++L+A K+VER M GV+VP
Sbjct: 392 PNMHTYIMLLQGHLGKRGRKGRDPLVNFESIFVGGLVKAGRTLEATKFVERTMWGGVDVP 451
Query: 407 RFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLADIFQRYGK 450
RFDYNKFL+Y+SNE+GV MFEEVG++L++VG DL DIF YG+
Sbjct: 452 RFDYNKFLYYFSNEDGVSMFEEVGRRLKDVGHVDLGDIFLTYGE 495
>gi|297607573|ref|NP_001060187.2| Os07g0599100 [Oryza sativa Japonica Group]
gi|22775643|dbj|BAC15497.1| putative disease resistance protein RPH8A [Oryza sativa Japonica
Group]
gi|255677948|dbj|BAF22101.2| Os07g0599100 [Oryza sativa Japonica Group]
Length = 1494
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/464 (46%), Positives = 291/464 (62%), Gaps = 26/464 (5%)
Query: 2 PVDPGHLVRVCTILYQQQYSPESRLHSSLS-----SCNFNLTHEFFLQICNNFPLSWRPV 56
P DP L+R+CT+LYQ Q++PE L LS S + E FLQ FPLSWRPV
Sbjct: 43 PTDPSLLLRLCTVLYQHQHAPEDALRRRLSALPLPSAAADDLRELFLQASARFPLSWRPV 102
Query: 57 YLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALM 116
+ A FAH+ T R +D++ KSRN+DL TL L + + A+
Sbjct: 103 RRLLDHLTAAH-GFAHSPATAARFLDVLAKSRNVDLLHSTLLSFPPA-LRSLAALRAAIR 160
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPN 176
LA RE+ K+ + + D +L + VV ++C+ V E + IK
Sbjct: 161 GLAPAREVGKVSSLLALFPDADRPRTLNFITDVVCSVCKLPDVAE---------KVIKQA 211
Query: 177 EIAYG---------WLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINK 227
E YG L+ GYC G L +A ++WN M G +P ++++ T FK N+
Sbjct: 212 EHRYGVSRTGRCCELLVVGYCRAGMLSDACRVWNGMERRGLDPGAAAYEEIVVTLFKNNR 271
Query: 228 DDEAMKVFQMMRVKRMDDLGLS-TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTL 286
+AMKVF MR + + D G YR V+ W+CK G++ AY + EMFKRG+E D +
Sbjct: 272 VADAMKVFDGMRRRGVSDGGRGGCYRAVVSWLCKEGRMWGAYMVFAEMFKRGVEVDGEVM 331
Query: 287 SSIIYGLLARGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
++YGLL R R+RE Y+V +++ DI+LYHGL+KGL+R++RAREAT+VFREM+ GCE
Sbjct: 332 GDLVYGLLVRRRVREGYRVFHGVKEKDIALYHGLMKGLIRIKRAREATEVFREMVATGCE 391
Query: 347 PTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
P MHTYIMLLQGHLGKRGRKG DPLVNF++IFVGGLVKAG++L+A K+VER M GV+VP
Sbjct: 392 PNMHTYIMLLQGHLGKRGRKGRDPLVNFESIFVGGLVKAGRTLEATKFVERTMWGGVDVP 451
Query: 407 RFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLADIFQRYGK 450
RFDYNKFL+Y+SNE+GV MFEEVG++L++VG DL DIF YG+
Sbjct: 452 RFDYNKFLYYFSNEDGVSMFEEVGRRLKDVGHVDLGDIFLTYGE 495
>gi|125559062|gb|EAZ04598.1| hypothetical protein OsI_26748 [Oryza sativa Indica Group]
Length = 514
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/464 (46%), Positives = 290/464 (62%), Gaps = 26/464 (5%)
Query: 2 PVDPGHLVRVCTILYQQQYSPESRLHSSLS-----SCNFNLTHEFFLQICNNFPLSWRPV 56
P+DP L+R+CT+LYQ Q++PE L LS S + E FLQ FPLSWRPV
Sbjct: 43 PIDPSLLLRLCTVLYQHQHAPEDALRRRLSVLPLPSVAADDLRELFLQASARFPLSWRPV 102
Query: 57 YLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALM 116
+ A FAH+ T R +D++ +SRN+DL TL L + + A+
Sbjct: 103 RRLLDHLTAAHG-FAHSPATAARFLDVLAESRNVDLLHSTLLSF-PPALRSLAALRAAIR 160
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPN 176
LA RE+ K+ + + D +L + VV ++C+ V E + IK
Sbjct: 161 GLAPAREVGKVSSLLALFPDADRPRTLNFITDVVCSVCKLPDVAE---------KVIKQA 211
Query: 177 EIAYG---------WLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINK 227
E YG L+ GYC G L +A ++WN M G +P ++++ T FK N+
Sbjct: 212 EHRYGVSQTGRCCELLVVGYCRAGMLSDACRVWNGMERRGLDPGAAAYEEIVVTLFKNNR 271
Query: 228 DDEAMKVFQMMRVKRMDDLGLS-TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTL 286
+AMKVF MR + + D G YR V+ W+CK G++ AY + EMFKRG+E D +
Sbjct: 272 VADAMKVFDGMRRRGVSDGGRGGCYRAVVSWLCKEGRMWGAYMVFAEMFKRGVEVDGEVM 331
Query: 287 SSIIYGLLARGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
++YGLL R R+RE Y+V +++ DI+LYHGL+KGL+R++RAREAT+VFREM+ GCE
Sbjct: 332 GDLVYGLLVRRRVREGYRVFHGVKEKDIALYHGLMKGLIRIKRAREATEVFREMVATGCE 391
Query: 347 PTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
P MHTYIMLLQGHLGKRGRKG DPLVNF++IFVGGLVK G++L+A K+VER M GV+VP
Sbjct: 392 PNMHTYIMLLQGHLGKRGRKGRDPLVNFESIFVGGLVKPGRTLEATKFVERTMWGGVDVP 451
Query: 407 RFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLADIFQRYGK 450
RFDYN FL+Y+SNE+GV MFEEVG++L++VG DL DIF YG+
Sbjct: 452 RFDYNTFLYYFSNEDGVSMFEEVGRRLKDVGHVDLGDIFLTYGE 495
>gi|212274435|ref|NP_001130599.1| uncharacterized protein LOC100191698 [Zea mays]
gi|194689596|gb|ACF78882.1| unknown [Zea mays]
gi|414887463|tpg|DAA63477.1| TPA: hypothetical protein ZEAMMB73_410193 [Zea mays]
Length = 519
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/481 (44%), Positives = 292/481 (60%), Gaps = 24/481 (4%)
Query: 2 PVDPGHLVRVCTILYQQQYSPESRLHSSLSSCNFNLT----HEFFLQICNNFPLSWRPVY 57
P DP ++R+CTILYQQQ+ P+ L LS+ E FLQ + FPLSWRPV+
Sbjct: 30 PTDPALMLRLCTILYQQQHDPDDALRRRLSALPLPTAPADIRELFLQASSRFPLSWRPVH 89
Query: 58 LFFQYTQKAQ------------------PCFAHNSITFNRMVDIIGKSRNIDLFWETLQE 99
+ F H+ T R++D++ KS NIDL TL
Sbjct: 90 RLLSHLSTLHRGAGAGDGDGDSDSDSGGGGFPHSPATAARLLDVLAKSGNIDLLHSTLFS 149
Query: 100 MGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKT-LCQRKL 158
+ R L++ + A+ LA RE+ K+ + +C L + V + C+
Sbjct: 150 LPRS-LLSAAALRAAVRGLAPAREVGKVAALVTLFPECHRARVLTFVTDVACSEPCRLPD 208
Query: 159 VVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKM 218
V E + + L+ YC G L +A ++WN M G EP ++
Sbjct: 209 VAEKAIKRAEHRHGVARTGRCCDLLVVAYCRAGSLADACRVWNGMERRGLEPGAAAYQEI 268
Query: 219 IETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRG 278
+ T FK N+ +AMK+F MR + D G R V+ W+CK G++ AY +L EM KRG
Sbjct: 269 VVTMFKNNRVADAMKLFDGMRRSGVRDNGGGCCRAVVSWLCKEGRVWGAYMVLAEMVKRG 328
Query: 279 IEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFR 338
+E D L ++YGL++R R+REAY+V +++ +I+LYHGL+KGLLR++RA EAT+VFR
Sbjct: 329 LEVDGEVLGDLVYGLMSRRRVREAYRVFHGVKEKEIALYHGLMKGLLRIKRAGEATEVFR 388
Query: 339 EMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERV 398
EMI RGCEP MHTYIMLLQGHLGKRGRKG DPLVNF++IFVGGLVKAG++L+A K+VER
Sbjct: 389 EMITRGCEPNMHTYIMLLQGHLGKRGRKGRDPLVNFESIFVGGLVKAGRTLEATKFVERT 448
Query: 399 MNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLADIFQRYGKKMATRERR 458
M GV+VPRFDYNKFL+Y+SN+EG VMFEEV K+L+EVG+ DLADI YG++M TR+RR
Sbjct: 449 MWGGVDVPRFDYNKFLYYFSNDEGAVMFEEVSKRLKEVGVIDLADILSAYGERMTTRDRR 508
Query: 459 R 459
R
Sbjct: 509 R 509
>gi|242050794|ref|XP_002463141.1| hypothetical protein SORBIDRAFT_02g038430 [Sorghum bicolor]
gi|241926518|gb|EER99662.1| hypothetical protein SORBIDRAFT_02g038430 [Sorghum bicolor]
Length = 514
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/463 (45%), Positives = 279/463 (60%), Gaps = 16/463 (3%)
Query: 3 VDPGHLVRVCTILYQQQYSPESRLHSSLSSCNFNLT----HEFFLQICNNFPLSWRPVYL 58
DP L+R+CTILYQQQ+ P+ L LS+ E FLQ FPLSWRPV+
Sbjct: 34 TDPALLLRLCTILYQQQHDPDDSLRRRLSALPLPTAPADIRELFLQASARFPLSWRPVHR 93
Query: 59 FFQYTQKAQ----------PCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND 108
+ F H+ T R++D++ KS NIDL TL + R L++
Sbjct: 94 LLAHLSTLHHGDGDGDGGGGGFPHSPATAARLLDVLAKSGNIDLLHSTLFSLPRS-LLSA 152
Query: 109 KTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKT-LCQRKLVVEAKYLIL 167
+ A+ LA RE+ K+ + +C L + V + C+ V E
Sbjct: 153 AALRAAVRGLAPAREVGKVAKLVTLFPECHRARVLTFVTDVACSEPCRLPDVAEKAIKRA 212
Query: 168 KLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINK 227
+ ++ L+ YC G L +A ++WN M G EP +++ T FK N+
Sbjct: 213 EHRHGVERTGRCCDLLVVAYCRAGSLADACRVWNGMERRGLEPGAAAYQEIVVTMFKNNR 272
Query: 228 DDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLS 287
+AMK+F MR + D V+ W+CK G++ AY +L EM KRG+E D L
Sbjct: 273 VADAMKMFDGMRRNGVPDNEGGCCCAVVSWLCKDGRVWGAYMVLAEMVKRGLEVDGELLG 332
Query: 288 SIIYGLLARGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
++YGL+ R R REAY+V +++ DI+LYHGL+KGLLR++RA EAT+VFREMI RGCEP
Sbjct: 333 DLVYGLMVRRRAREAYRVFHGVKEKDIALYHGLMKGLLRIKRAGEATEVFREMITRGCEP 392
Query: 348 TMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPR 407
MHTYIMLLQGHLGKRGRKG DPLVNF++IFVGGLVKAG++L+ K+VER M GV+VPR
Sbjct: 393 NMHTYIMLLQGHLGKRGRKGRDPLVNFESIFVGGLVKAGRTLEVTKFVERTMWGGVDVPR 452
Query: 408 FDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLADIFQRYGK 450
FDYNKFL+Y+SNEEG VMFEEVGK+LREVG+ DLADI YG+
Sbjct: 453 FDYNKFLYYFSNEEGAVMFEEVGKRLREVGVIDLADILSAYGE 495
>gi|224128340|ref|XP_002320305.1| predicted protein [Populus trichocarpa]
gi|222861078|gb|EEE98620.1| predicted protein [Populus trichocarpa]
Length = 540
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 142/475 (29%), Positives = 260/475 (54%), Gaps = 19/475 (4%)
Query: 1 APVDPGHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFF 60
+ DP + +VC ++ + ++ + + + L C NL+H+ +++ F + +P + FF
Sbjct: 69 STADPAEVHKVCKVI-DELFALDHNMEAVLDECGINLSHDLVIEVLERFRHARKPAFRFF 127
Query: 61 QYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAE 120
+ + +P F H+S T++ M+ I+ K+R + L+EMG +RL+ TF IA+ A
Sbjct: 128 CWAAE-KPGFVHDSRTYHSMMIILAKARQFETMMSMLEEMGEKRLLTLDTFSIAMRAFAA 186
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAY 180
+E KK V F +M + +E +N ++ +L + KL EA+ L KL PN Y
Sbjct: 187 AKERKKAVGIFELMKNHKYRVGVETINALLDSLGRAKLGKEAQALFGKLEGRFTPNLRTY 246
Query: 181 GWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
L+ G+C V +L+EA +IWN M DEGF+P I + M+E + K +A+K F++M+
Sbjct: 247 TVLLNGWCRVKNLMEAGRIWNEMLDEGFKPDIVTHNIMLEGLLRSKKRSDAIKFFEVMKA 306
Query: 241 KRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
K + +Y I+I +CK+ K+ +A EM G D + ++ G R+
Sbjct: 307 KG-PSPDVRSYTILIRDLCKQTKMKEAVGYFYEMVDSGCHPDAAVYTCLMTGYGNHKRMD 365
Query: 301 EAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
Y++++E+++ PD Y+ LIK + R +A +++++MI+ G EP++H+Y M++
Sbjct: 366 MVYELLKEMKEKGCPPDGKTYNALIKLMTSQRMPDDAVRIYKKMIQNGIEPSIHSYNMIM 425
Query: 357 QGHLGKR------------GRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVE 404
+ + R +KG P N T+F+GGL+ G+S +A KY+E ++ +G++
Sbjct: 426 KSYFRIRNYEMGHAVWDEMSKKGFCPDDNSYTVFIGGLISQGRSEEACKYLEEMIEKGMK 485
Query: 405 VPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLADIFQRYGKKMATRERRR 459
P+ DYNKF +S + EE+ +K++ G +++++F R+ + M R +RR
Sbjct: 486 APQLDYNKFAADFSRAGKPDILEELAQKMKFSGKFEVSNVFARWAEMMKKRVKRR 540
>gi|255548471|ref|XP_002515292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545772|gb|EEF47276.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 139/478 (29%), Positives = 255/478 (53%), Gaps = 19/478 (3%)
Query: 1 APVDPGHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFF 60
+ DP + RVC ++ + ++ + + + L C NL+H+ + + F + +P + FF
Sbjct: 58 SSADPVEVDRVCKVI-DELFALDRNMEAVLDECGINLSHDLVIDVLERFCHARKPAFRFF 116
Query: 61 QYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAE 120
+ + Q F H+S T+N M+ I+ K+R + L+EMG + ++ TF IA+ A
Sbjct: 117 CWAGEKQG-FEHDSRTYNSMMSILAKTRQFETVVSMLEEMGGKGVLTMDTFSIAMRAFAA 175
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAY 180
+E KK V F +M + +E +N ++ +L + KL EA+ L L PN Y
Sbjct: 176 AKERKKAVAMFELMKKYNYKVGVETINHLLDSLGRAKLGKEAQALFENLKGRFTPNLRTY 235
Query: 181 GWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
L+ G+C V +L+EA +WN M D+GF+P I + M+E + + +A+K+F +M+
Sbjct: 236 TVLLNGWCKVKNLMEAGSVWNEMIDKGFKPDIVAHNIMLEGLLRSKQRSDAIKLFMVMKA 295
Query: 241 KRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
K + +Y I+I ++C++ K+ +A +EM G + D + +I G R R+
Sbjct: 296 KG-PSPDVRSYTILIRYLCRQSKMEEAVEYFQEMIDSGCKPDAAVYTCLITGFGNRKRMD 354
Query: 301 EAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
Y +++E+++ PD Y+ LIK + RL+ +A +++++M + G EPT+HTY M++
Sbjct: 355 MVYDLLKEMKEEGCPPDGLTYNALIKLMTRLKMPDDAARIYKKMTQSGIEPTIHTYNMIM 414
Query: 357 QGHLGKR------------GRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVE 404
+ + R RKG P N T+ +GGL+ G+S +A KY+E ++ +G++
Sbjct: 415 KSYFQTRNYEMGRAVWDEMSRKGFCPDDNSYTVLIGGLISQGRSGEACKYLEEMLEKGMK 474
Query: 405 VPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLADIFQRYGKKMATRERRRNRA 462
P+ DYNKF S + EE+ ++L+ G ++++ + + R +RR+ A
Sbjct: 475 APQLDYNKFGADLSRGGNPDILEELAQRLKFSGKFGVSNVLASWAGMIQKRVKRRDLA 532
>gi|449454008|ref|XP_004144748.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Cucumis sativus]
gi|449490811|ref|XP_004158714.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Cucumis sativus]
Length = 621
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 140/474 (29%), Positives = 249/474 (52%), Gaps = 19/474 (4%)
Query: 3 VDPGHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQY 62
D + RVC ++ + ++ + + + L C L+H+ L++ F + +P + FF +
Sbjct: 140 CDSTEVNRVCKVI-DELFALDRNMEAVLDECGVKLSHDLVLEVLARFKQARKPAFRFFCW 198
Query: 63 TQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVR 122
+ +P FAH+S T+N M+ I+GK+R + L+EM + L+ +TF + A +
Sbjct: 199 AAQ-KPGFAHDSKTYNTMMTILGKTRQFETMVSLLEEMAEKELLTMETFTVCFKAFAAAK 257
Query: 123 ELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGW 182
E KK V +M + +E +N ++ +L + KL EA + KL PN Y
Sbjct: 258 ERKKAVGVLELMKKYKYKVGVETINCLLDSLGRAKLGKEALTIFEKLHGRFTPNLQTYTV 317
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
L+ G+C V +L+EA KIWN M DE F+P I + M+E + K +A+K+F++M+ K
Sbjct: 318 LLNGWCRVRNLMEAGKIWNQMIDEDFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKG 377
Query: 243 MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
+ +Y I++ CK+ K+ +A EEM G D + +I G + R+
Sbjct: 378 -PSPDVKSYTILVRDFCKQAKMKEAVQYFEEMQGAGCRPDAAIYTCLITGFGNQKRMDTV 436
Query: 303 YKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
Y +++E++ PD Y+ LIK + R +A +++++MI+ G +PT HTY M+++
Sbjct: 437 YGLLKEMKANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMIENGIKPTTHTYSMMMKS 496
Query: 359 HLGKRGR------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
+ R KG P N T+F+GGL+ G+ +A KY+E ++ +G++ P
Sbjct: 497 YFQTRNYEMGVAAWDEMKLKGCCPDDNSYTVFIGGLISLGRCAEAGKYLEEMIEKGMKAP 556
Query: 407 RFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLADIFQRYGKKMATRERRRN 460
+ DYNKF +S + EE+ +K++ G + +++ R+ + M R +RRN
Sbjct: 557 QLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASNVIARWAEMMRKRVKRRN 610
>gi|147862837|emb|CAN78368.1| hypothetical protein VITISV_028672 [Vitis vinifera]
Length = 927
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 142/475 (29%), Positives = 261/475 (54%), Gaps = 21/475 (4%)
Query: 3 VDPGHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQY 62
DP + RVC ++ + ++ + + + L CN +L+H + + F + +P + FF +
Sbjct: 200 ADPEEVSRVCRVI-DELFALDRNMEAVLDECNVDLSHALVVGVLERFKHARKPAFRFFCW 258
Query: 63 T-QKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEV 121
QKA F HNS T+N M+ ++G++R + L EMG + L+ +TF IA+ A
Sbjct: 259 AGQKAG--FTHNSRTYNAMMSVLGRTRQFESMMGMLGEMGEKGLLTMETFSIAIKAFAAA 316
Query: 122 RELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYG 181
+E KK V F +M + ++ +N ++ L + KL EA+ L KL + PN Y
Sbjct: 317 KERKKAVGVFELMKRYNFDAGVDTINCLLDNLGRAKLGKEAQALFEKLEDRFTPNLRTYT 376
Query: 182 WLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK 241
L+ G+C + +L+EA + WN M D+GF+P I M+E K K +A+K+F++M+ K
Sbjct: 377 VLLNGWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAK 436
Query: 242 RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
+ TY I+I +CK+ K+ +A +EM G + D + +I G + ++ +
Sbjct: 437 GPSP-NVRTYTILIRDLCKQMKMKEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDK 495
Query: 302 AYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
Y +++E+++ D Y+ LIK + + +A +++++MI+ G +PT+HTY M+++
Sbjct: 496 VYALLKEMKEKGCPADGRTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQPTLHTYNMMMK 555
Query: 358 GHLGKR------------GRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEV 405
+ R GRKG P N +F+GGL++ G+S +A +Y+E ++ +G++
Sbjct: 556 SYFYTRNYEMGCAVWKEMGRKGCCPDDNSYIVFIGGLIRHGRSEEACRYLEEMIEKGMKA 615
Query: 406 PRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLADIFQRYGKKMATRERRRN 460
P+ DYNKF +S + EE+ +K++ G +++++F R+ + M R +RR+
Sbjct: 616 PQLDYNKFAADFSRAGKPDILEELARKMKFEGKFEVSNVFARWAEMMKKRVKRRD 670
>gi|225447826|ref|XP_002268129.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Vitis vinifera]
Length = 679
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 141/475 (29%), Positives = 260/475 (54%), Gaps = 21/475 (4%)
Query: 3 VDPGHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQY 62
DP + RVC ++ + ++ + + + L CN +L+H + + F + +P + FF +
Sbjct: 200 ADPEEVSRVCRVI-DELFALDRNMEAVLDECNVDLSHALVVGVLERFKHARKPAFRFFCW 258
Query: 63 T-QKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEV 121
QKA F HNS T+N M+ ++G++R + L EMG + L+ +TF IA+ A
Sbjct: 259 AGQKAG--FTHNSRTYNAMMSVLGRTRQFESMMGMLGEMGEKGLLTMETFSIAIKAFAAA 316
Query: 122 RELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYG 181
+E KK V F +M + ++ +N ++ L + KL EA+ L KL + PN Y
Sbjct: 317 KERKKAVGVFELMKRYNFDAGVDTINCLLDNLGRAKLGKEAQALFEKLEDRFTPNLRTYT 376
Query: 182 WLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK 241
L+ G+C + +L+EA + WN M D+GF+P I M+E K K +A+K+F++M+ K
Sbjct: 377 VLLNGWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAK 436
Query: 242 RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
+ TY I+I +CK+ K+ +A +EM G + D + +I G + ++ +
Sbjct: 437 G-PSPNVRTYTILIRDLCKQMKMQEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDK 495
Query: 302 AYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
Y +++E+++ D Y+ LIK + + +A +++++MI+ G + T+HTY M+++
Sbjct: 496 VYALLKEMKEKGCPADGRTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQSTLHTYNMMMK 555
Query: 358 GHLGKR------------GRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEV 405
+ R GRKG P N +F+GGL++ G+S +A +Y+E ++ +G++
Sbjct: 556 SYFYTRNYEMGCAVWEEMGRKGCCPDDNSYIVFIGGLIRHGRSEEACRYLEEMIEKGMKA 615
Query: 406 PRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLADIFQRYGKKMATRERRRN 460
P+ DYNKF +S + EE+ +K++ G +++++F R+ + M R +RR+
Sbjct: 616 PQLDYNKFAADFSRAGKPDILEELARKMKFEGKFEVSNVFARWAEMMKKRVKRRD 670
>gi|356549210|ref|XP_003542990.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Glycine max]
Length = 648
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 132/473 (27%), Positives = 253/473 (53%), Gaps = 19/473 (4%)
Query: 3 VDPGHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQY 62
DP + RVC ++ + ++ + + L C L+H+ + + F + +P + FF +
Sbjct: 169 ADPVEVERVCKVI-DELFALDRNMEVVLDECGVRLSHDLVVDVLQRFKHARKPAFRFFCW 227
Query: 63 TQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVR 122
K +P FAH+S T+N M+ ++G++R + L+EMG + L+ +TF IA+ AE +
Sbjct: 228 AGK-RPGFAHDSRTYNFMMCVLGRTRQFETMVAMLEEMGEKGLLTMETFSIAIKAFAEAK 286
Query: 123 ELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGW 182
+ KK V F +M G + ++++N ++ +L KL EA+ + KL + P+ Y
Sbjct: 287 QRKKAVGIFDLMKKYGFKVGVDVINFLLDSLSTAKLGKEAQAVFEKLKDRFTPSLQTYTI 346
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
L+ G+C + +L+EA ++WN M D GF P + + M+E K K +A+K+F++M+ K
Sbjct: 347 LLSGWCRLKNLLEAGRVWNEMIDRGFNPDVVAHNVMLEGLLKCKKKSDAIKLFEIMKAKG 406
Query: 243 MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
+ +Y I+I CK+ + +A + M RG + D + +I G + ++
Sbjct: 407 PSP-NVRSYTIMIQDFCKQKLMGEAIEYFDVMVDRGCQPDAALYTCLITGFGRQKKMDMV 465
Query: 303 YKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
Y +++E+ + PD Y+ LIK + +A +++++MI+ G +PT+HTY M+++
Sbjct: 466 YSLLKEMRERGCPPDGRTYNALIKLMTSQHMPDDAVRIYKKMIQSGIKPTIHTYNMIMKS 525
Query: 359 HLGKRG------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
+ + +KG P N +++GGL++ +S +A KY+E ++ +G++ P
Sbjct: 526 YFVTKNYEMGHEIWDEMHQKGCCPDDNSYIVYIGGLIRQDRSGEACKYLEEMLEKGMKAP 585
Query: 407 RFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLADIFQRYGKKMATRERRR 459
+ DYNKF S V+ EE+ +K+ VG +++++ + M +RR
Sbjct: 586 KLDYNKFASDISKTGNAVILEELARKMNFVGKFEVSNVLASWADMMKKSAKRR 638
>gi|15228767|ref|NP_191806.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181319|sp|Q9LZP3.1|PP293_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g62470, mitochondrial; Flags: Precursor
gi|7340718|emb|CAB82961.1| putative protein [Arabidopsis thaliana]
gi|34365579|gb|AAQ65101.1| At3g62470 [Arabidopsis thaliana]
gi|332646835|gb|AEE80356.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 599
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 139/480 (28%), Positives = 257/480 (53%), Gaps = 21/480 (4%)
Query: 1 APVDPGHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFF 60
+ +P + RVC ++ + ++ + + + L +L+H+ +++ F + +P + FF
Sbjct: 124 SSTNPEEVERVCKVI-DELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFF 182
Query: 61 QYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAE 120
+ + Q FAH+S T+N M+ I+ K+R + L+EMG + L+ +TF IA+ A
Sbjct: 183 CWAAERQG-FAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAA 241
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAY 180
+E KK V F +M + +E +N ++ +L + KL EA+ L KL E PN + Y
Sbjct: 242 AKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTY 301
Query: 181 GWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
L+ G+C V +LIEA++IWN M D+G +P I + M+E + K +A+K+F +M+
Sbjct: 302 TVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKS 361
Query: 241 KRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
K + +Y I+I CK+ + A ++M G++ D + +I G + +L
Sbjct: 362 KG-PCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLD 420
Query: 301 EAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
Y++++E+++ PD Y+ LIK + + AT+++ +MI+ EP++HT+ M++
Sbjct: 421 TVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIM 480
Query: 357 QGHLGKRG------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVE 404
+ + R +KG P N T+ + GL+ GKS +A +Y+E ++++G++
Sbjct: 481 KSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMK 540
Query: 405 VPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLADIFQRYGKKMATRERRRNRAIE 464
P DYNKF + +FEE+ ++ + G A+IF R+ + TR R + R +E
Sbjct: 541 TPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEIFARWAQ--MTRRRFKQRFME 598
>gi|297821162|ref|XP_002878464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324302|gb|EFH54723.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 628
Score = 237 bits (605), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 139/480 (28%), Positives = 256/480 (53%), Gaps = 21/480 (4%)
Query: 1 APVDPGHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFF 60
+ +P + RVC ++ + ++ + + + L L+H+ +++ F + +P + FF
Sbjct: 133 SSTNPEEVERVCKVI-DELFALDRNMEAVLDEMKVELSHDLIVKVLERFRHARKPAFRFF 191
Query: 61 QYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAE 120
+ + Q FAH+S T+N M+ I+ K+R + L+EMG + L+ +TF IA+ A
Sbjct: 192 CWAAEKQG-FAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAA 250
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAY 180
+E KK V F +M + +E +N ++ +L + KL EA+ L KL E PN + Y
Sbjct: 251 AKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTY 310
Query: 181 GWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
L+ G+C V +LIEA++IWN M D+G +P I + M+E + K +A+K+F +M+
Sbjct: 311 TVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKS 370
Query: 241 KRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
K + +Y I+I CK+ + A ++M G++ D + +I G + +L
Sbjct: 371 KG-PCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLD 429
Query: 301 EAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
Y++++E+++ PD Y+ LIK + + AT+++ +MI+ EP++HT+ M++
Sbjct: 430 TVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIM 489
Query: 357 QGHLGKRG------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVE 404
+ + R +KG P N T+ + GL+ GKS +A +Y+E ++++G++
Sbjct: 490 KSYFMARNYEMGSAVWDEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMK 549
Query: 405 VPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLADIFQRYGKKMATRERRRNRAIE 464
P DYNKF + +FEE+ ++ + G A+IF R+ + TR R + R +E
Sbjct: 550 TPLIDYNKFAADFHKGGQPEIFEELAQRAKFSGKFAAAEIFARWAQ--MTRRRCKQRFME 607
>gi|15241508|ref|NP_196986.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173968|sp|Q9LEQ7.1|PP382_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g14820, mitochondrial; Flags: Precursor
gi|9755750|emb|CAC01881.1| putative protein [Arabidopsis thaliana]
gi|332004697|gb|AED92080.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 138/480 (28%), Positives = 255/480 (53%), Gaps = 21/480 (4%)
Query: 1 APVDPGHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFF 60
+ +P + RVC ++ + ++ + + + L +L+H+ +++ F + +P + FF
Sbjct: 123 SSTNPEEVERVCKVI-DELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFF 181
Query: 61 QYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAE 120
+ + Q FAH+S T+N M+ I+ K+R + L+EMG + L+ +TF IA+ A
Sbjct: 182 CWAAERQG-FAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAA 240
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAY 180
+E KK V F +M + +E +N ++ +L + KL EA+ L KL E PN + Y
Sbjct: 241 AKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTY 300
Query: 181 GWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
L+ G+C V +LIEA++IWN M D G +P I + M+E + K +A+K+F +M+
Sbjct: 301 TVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKS 360
Query: 241 KRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
K + +Y I+I CK+ + A ++M G++ D + +I G + +L
Sbjct: 361 KG-PCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLD 419
Query: 301 EAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
Y++++E+++ PD Y+ LIK + + T+++ +MI+ EP++HT+ M++
Sbjct: 420 TVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIM 479
Query: 357 QGHLGKRG------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVE 404
+ + R +KG P N T+ + GL+ GKS +A +Y+E ++++G++
Sbjct: 480 KSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMK 539
Query: 405 VPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLADIFQRYGKKMATRERRRNRAIE 464
P DYNKF + +FEE+ ++ + G A+IF R+ + TR R + R +E
Sbjct: 540 TPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEIFARWAQ--MTRRRCKQRFME 597
>gi|15228788|ref|NP_191813.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122214682|sp|Q3EAF8.1|PP294_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g62540, mitochondrial; Flags: Precursor
gi|332646841|gb|AEE80362.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 599
Score = 234 bits (598), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 138/480 (28%), Positives = 254/480 (52%), Gaps = 21/480 (4%)
Query: 1 APVDPGHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFF 60
+ +P + RVC ++ + ++ + + + L +L+H+ +++ F + +P + FF
Sbjct: 124 SSTNPEEVERVCKVI-DELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFF 182
Query: 61 QYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAE 120
+ + Q FAH S T+N M+ I+ K+R + L+EMG + L+ +TF IA+ A
Sbjct: 183 CWAAERQG-FAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAA 241
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAY 180
+E KK V F +M + +E +N ++ +L + KL EA+ L KL E PN + Y
Sbjct: 242 AKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTY 301
Query: 181 GWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
L+ G+C V +LIEA++IWN M D G +P I + M+E + K +A+K+F +M+
Sbjct: 302 TVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKS 361
Query: 241 KRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
K + +Y I+I CK+ + A ++M G++ D + +I G + +L
Sbjct: 362 KG-PCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLD 420
Query: 301 EAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
Y++++E+++ PD Y+ LIK + + T+++ +MI+ EP++HT+ M++
Sbjct: 421 TVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIM 480
Query: 357 QGHLGKRG------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVE 404
+ + R +KG P N T+ + GL+ GKS +A +Y+E ++++G++
Sbjct: 481 KSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMK 540
Query: 405 VPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLADIFQRYGKKMATRERRRNRAIE 464
P DYNKF + +FEE+ ++ + G A+IF R+ + TR R + R +E
Sbjct: 541 TPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEIFARWAQ--MTRRRCKQRFME 598
>gi|242087579|ref|XP_002439622.1| hypothetical protein SORBIDRAFT_09g017100 [Sorghum bicolor]
gi|241944907|gb|EES18052.1| hypothetical protein SORBIDRAFT_09g017100 [Sorghum bicolor]
Length = 657
Score = 234 bits (596), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 141/476 (29%), Positives = 252/476 (52%), Gaps = 20/476 (4%)
Query: 1 APVDPGHLVRVCT-ILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLF 59
A +P + RVC I ++ L ++LS+ + L L + + F + RP Y F
Sbjct: 157 ATSNPEVVGRVCAAIADVVAAGADANLEAALSALSPPLCEAVVLAVLHRFKHAHRPSYRF 216
Query: 60 FQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLA 119
F++ A F H +IT+ +M+ I+GK+R ++ +QEMG+ ++ FK+A+ + A
Sbjct: 217 FRWAT-ASGGFTHTTITYCKMLHILGKTRQFEMMVAIIQEMGKVGALSMDAFKVAIKSFA 275
Query: 120 EVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIA 179
E+K V F +M G + +E N ++ L L EA+ + K+ P+ +
Sbjct: 276 AAGEIKNAVGVFELMKKNGFDDGVESFNCLLVALANEGLGREARQVFDKMHGQYSPDLRS 335
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
Y L+ +C+ +L+EA ++WN M ++G +P + V + MIE + + EA+K+F++M+
Sbjct: 336 YTALMLAWCNARNLVEAGRVWNEMLEKGMKPDVVVHNTMIEGLLRGQRRPEALKMFELMK 395
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
K + TY ++I CKRGK+ A EEM + + D T + ++ G R+
Sbjct: 396 AKG-PPPNVWTYTMLIRDHCKRGKMDMAMECFEEMQEARCQPDVATYTCLLVGYGNAKRM 454
Query: 300 REAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
V+EE+ + PD Y+ LIK L + +A +++++MIK+G EPT+HTY M+
Sbjct: 455 DRVTAVLEEMTQKGCPPDARTYNALIKLLTNRKMPDDAARIYKKMIKKGLEPTIHTYNMM 514
Query: 356 LQGH-LGKRG------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
++ + LG R R+G P VN T+F+ G ++ G+ +A KY+E ++N+G
Sbjct: 515 MKSYFLGDRNYAMGCAVWEEMHRRGICPDVNSYTVFINGHIRHGRPEEAYKYIEEMINKG 574
Query: 403 VEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLADIFQRYGKKMATRERR 458
+ P+ DYNKF +S + E+ K++ G D +++F ++ +M +R +R
Sbjct: 575 MTAPQIDYNKFAADFSKAGKPDILYELALKVKFAGKCDASNVFFQWADRMKSRVKR 630
>gi|356561933|ref|XP_003549231.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g62470, mitochondrial-like [Glycine max]
Length = 510
Score = 234 bits (596), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 131/473 (27%), Positives = 250/473 (52%), Gaps = 19/473 (4%)
Query: 3 VDPGHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQY 62
DP + RVC ++ + ++ + + L C L+H+ + + F + +P + FF
Sbjct: 31 ADPVEVERVCKVI-DELFALDRNMEVVLDECGVRLSHDLVVDVLQRFKHARKPAFRFFCX 89
Query: 63 TQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVR 122
K +P FAH+S T+N M+ ++G++R + L+EMG + L+ +TF IA+ AE +
Sbjct: 90 AGK-RPGFAHDSRTYNFMMCVLGRTRQFETMVAKLEEMGEKGLLTMETFSIAIKAFAEAK 148
Query: 123 ELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGW 182
+ KK V F +M G + ++++N ++ +L KL EA+ + KL + P+ Y
Sbjct: 149 QRKKEVGIFDLMKKYGFKVGVDVINFLLDSLSTAKLGKEAQAVFEKLKDRFTPSLQTYTI 208
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
L+ G+C + +L+EA ++WN M D GF P I + M+E K K +A+K+F++M+ K
Sbjct: 209 LLSGWCRLKNLLEAGRVWNEMIDRGFNPDIVAHNVMLEGLLKCKKKSDAIKLFEIMKAKG 268
Query: 243 MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
+ +Y I+I CK+ + +A + M RG + D + +I G + ++
Sbjct: 269 -PSPNVRSYTIMIQDFCKQKLMGEAIEYFDVMVDRGCQPDAALYTCLITGFGRQKKMDMV 327
Query: 303 YKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
Y +++E+ + PD Y+ LIK + +A +++++MI+ G +PT+HTY M+++
Sbjct: 328 YSLLKEMRERGCPPDGRTYNALIKLMTSQHMPDDAVRIYKKMIQSGIKPTIHTYNMIMKS 387
Query: 359 HLGKRG------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
+ + KG P N +++GGL++ +S +A KY+E ++ +G++
Sbjct: 388 YFVTKNYEMGHEIWDEMHPKGCCPDDNSYIVYIGGLIRQDRSGEACKYLEEMLEKGMKAL 447
Query: 407 RFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLADIFQRYGKKMATRERRR 459
+ DYNKF S V+ EE+ +K+ VG +++++ + M +R+
Sbjct: 448 KLDYNKFASDISKTGNAVILEELARKMNFVGKFEVSNVLASWADMMKKSAKRK 500
>gi|115463377|ref|NP_001055288.1| Os05g0355200 [Oryza sativa Japonica Group]
gi|55168028|gb|AAV43896.1| unknown protein [Oryza sativa Japonica Group]
gi|55168069|gb|AAV43937.1| unknown protein [Oryza sativa Japonica Group]
gi|113578839|dbj|BAF17202.1| Os05g0355200 [Oryza sativa Japonica Group]
Length = 632
Score = 231 bits (589), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 141/479 (29%), Positives = 249/479 (51%), Gaps = 26/479 (5%)
Query: 5 PGHLVRVCTILYQQQYSPES-----RLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLF 59
P H+ RVC + + L ++L++ + L+ L + + F + RP + F
Sbjct: 144 PEHVGRVCAAIADVVAAGAGAGADASLEAALTALSPPLSETLVLAVLDRFKHAHRPSHRF 203
Query: 60 FQYTQKA---QPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALM 116
F++ A FAH +IT+ +MV I+GK+R +QEMG+ + FKIA+
Sbjct: 204 FRWAAAAAAASGGFAHTTITYCKMVHILGKARQFQSMVALIQEMGKEGALCMDAFKIAIK 263
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPN 176
+ A E+K V F +M G + +E N ++ L Q L EA + ++ + P+
Sbjct: 264 SFAAAGEIKNAVGVFEMMRTHGFDDGVESFNCLLVALAQEGLGREANQVFDRMRDRYAPD 323
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
+Y L+ +C+ +L+EA ++WN M + G +P + V + MIE + + EA+K+F+
Sbjct: 324 LRSYTALMLAWCNARNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFE 383
Query: 237 MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR 296
+M+ K + TY ++I CKRGK+ A EEM G + D T + ++ G
Sbjct: 384 LMKAKG-PAPNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNA 442
Query: 297 GRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
R+ ++EE+ + PD Y+ LIK L +A +++++MIK+G EPT+HTY
Sbjct: 443 KRMDRVTALLEEMTQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTY 502
Query: 353 IMLLQGH-LGKRG------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVM 399
M+++ + LG R RKG P VN T+F+ G ++ G+ +A KY+E ++
Sbjct: 503 NMMMKSYFLGGRNYMMGCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPEEACKYIEEMI 562
Query: 400 NRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLADIFQRYGKKMATRERR 458
+G++ P+ DYNKF +S + E+ +K++ G D +++F ++ ++M R +R
Sbjct: 563 QKGMKTPQIDYNKFAADFSKAGKPDILYELAQKVKFTGKFDASNVFHQWAERMKKRVKR 621
>gi|413949009|gb|AFW81658.1| hypothetical protein ZEAMMB73_233967 [Zea mays]
Length = 637
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 139/476 (29%), Positives = 252/476 (52%), Gaps = 20/476 (4%)
Query: 1 APVDPGHLVRVCTILYQQ-QYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLF 59
A +P + RVC + ++ L ++LS+ + L L + + F + RP Y F
Sbjct: 153 ATSNPEGVGRVCAAIADVIAAGADANLEAALSALSPPLCEAVVLAVLHRFKHAHRPSYRF 212
Query: 60 FQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLA 119
F++ A F H +IT+ +M+ I+GK+R + LQEMG+ ++ FK+A+ + A
Sbjct: 213 FRWAT-ASGGFTHTTITYCKMLLILGKTRQFESMVALLQEMGKAGTLSMDAFKVAIKSFA 271
Query: 120 EVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIA 179
E+K V F +M G + +E N ++ L L EA+ + K+ P+ +
Sbjct: 272 AAGEIKNAVGVFELMRKNGFDDGVESFNCLLVALANEGLGREARQVFDKMLGQYSPDLRS 331
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
Y L+ +C+ +L+EA ++WN M ++G +P + V + MIE + + EA+K+F++M+
Sbjct: 332 YTALMLAWCNARNLVEAGRVWNEMLEKGMKPDVVVHNTMIEGLLRGQRQHEAVKMFELMK 391
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
K + TY ++I CKRGK+ A EEM + + D T + ++ G R+
Sbjct: 392 AKG-PPPNVWTYTMLICNHCKRGKMDMAMECFEEMQEARCQPDVATYTCLLVGYGNAKRM 450
Query: 300 REAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
V+EE+ + PD Y+ LIK L + +A +++++MIK+G +PT+HTY M+
Sbjct: 451 DRVTAVLEEMTQKGCPPDARTYNALIKLLTNRKMPDDAARIYKKMIKKGLDPTIHTYNMM 510
Query: 356 LQGH-LGKRG------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
++ + LG R R+G P VN T+F+ G ++ G+ +A KY+E ++N+G
Sbjct: 511 MKSYFLGDRNYAMGCAVWEEMHRRGICPDVNSYTVFISGHIRHGRPEEAYKYIEEMINKG 570
Query: 403 VEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLADIFQRYGKKMATRERR 458
++ P+ D NKF S + M E+ +K++ G D+++ F ++ +M ++ +R
Sbjct: 571 MKAPQIDCNKFAADLSKAGKLDMLYELAQKVKFAGKFDVSNAFYQWADRMKSQVKR 626
>gi|413945076|gb|AFW77725.1| ATP binding protein isoform 1 [Zea mays]
gi|413945077|gb|AFW77726.1| ATP binding protein isoform 2 [Zea mays]
gi|413945078|gb|AFW77727.1| ATP binding protein isoform 3 [Zea mays]
Length = 634
Score = 227 bits (579), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 135/476 (28%), Positives = 254/476 (53%), Gaps = 20/476 (4%)
Query: 1 APVDPGHLVRVCTILYQQQYS-PESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLF 59
A +P + RVC + S ++ L ++LS+ + L L + + F + RP Y F
Sbjct: 155 AASNPEGVDRVCAAIADVVASGADANLEAALSALSPPLCEAVVLAVLHRFKHAHRPSYRF 214
Query: 60 FQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLA 119
F++ + F H +IT+ +M+ I+GK+R + +QEMG+ ++ FK+A+ + A
Sbjct: 215 FRWATVSG-GFTHTTITYCKMLHILGKTRQFESMVAMIQEMGKAGALSMDAFKVAIKSFA 273
Query: 120 EVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIA 179
E+K V F +M G + +E N ++ L + L EA+ + K+ P+ +
Sbjct: 274 AAGEIKNAVGVFELMRKNGFDDGVESFNCLLVALAKEGLGREARQVFDKMHGQYSPDLRS 333
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
Y L+ +C+ +L+EA ++WN M ++G +P + V + MIE + + EA+K+F++M+
Sbjct: 334 YTALMLAWCNARNLVEAGRVWNEMLEKGMDPDVVVHNTMIEGLLRGQRRPEAVKMFELMK 393
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
K + TY ++I CK+GK+ A EEM + + D T + ++ G ++
Sbjct: 394 AKG-PPPNVWTYTMLIRDHCKQGKMDMAMECFEEMQEAKCQPDVATYTCLLVGYGNAKQM 452
Query: 300 REAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
V+EE+ + PD Y+ LIK L +A +++++MIK+G EPT+HTY M+
Sbjct: 453 DRVTAVLEEMTQKGCPPDARTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMM 512
Query: 356 LQGH-LGKRG------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
++ + +G ++G P VN T+F+ G ++ G+ +A KY+E ++N+G
Sbjct: 513 MKSYFVGDSNYAMGCAVWEEMHQRGICPDVNSYTVFINGHIRHGRPEEAYKYIEEMINKG 572
Query: 403 VEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLADIFQRYGKKMATRERR 458
++ P+ DYNKF +S + E+ +K++ G D++++F ++ +M +R +R
Sbjct: 573 MKAPQIDYNKFAADFSKAGKPDILFELAQKVKFAGKLDVSNVFYQWADRMKSRVKR 628
>gi|357129397|ref|XP_003566348.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Brachypodium distachyon]
Length = 649
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 134/476 (28%), Positives = 250/476 (52%), Gaps = 20/476 (4%)
Query: 1 APVDPGHLVRVCTILYQ-QQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLF 59
A P H+ RVC + ++ L ++LS+ + L+ L + + F + RP F
Sbjct: 165 ASSHPEHVGRVCAAIADVMAAGADANLEATLSALSPPLSEALVLAVLDRFKHAHRPSRRF 224
Query: 60 FQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLA 119
FQ+ + F H +T+ +M+ I+GK+R + +QEMG+ + FKIA+ + A
Sbjct: 225 FQWAAASDE-FEHTPVTYCKMLHILGKARQFETMVALVQEMGKAGALCMDAFKIAIKSFA 283
Query: 120 EVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIA 179
E+K V F +M G + +E N ++ L Q L EA + ++ + P+ +
Sbjct: 284 AAGEIKNAVGVFEMMRVHGFDDGVESFNCLLVALAQEGLGKEAARVFDRMRDQYTPDLRS 343
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
Y L+ +C+ +L+EA ++WN M ++G +P + V + MI+ + + EA+K+F++M+
Sbjct: 344 YTALMLAWCNARNLVEAGRVWNDMLEKGMKPDVVVHNTMIDGLLRGQRRPEAVKMFELMK 403
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
K + TY ++I CK+GK+ A EEM G + + T + ++ G R+
Sbjct: 404 AKG-PPPNVWTYTMLIRDHCKQGKLDMAMRCFEEMQVAGCQPEVATYTCLLVGYGNAKRM 462
Query: 300 REAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
++EE+ + PD Y+ LIK L +A +++++MI +G EPT+HTY M+
Sbjct: 463 DRVTAMLEEMAQKGCPPDGRTYNALIKLLTNRNMPDDAVRIYKKMITKGLEPTIHTYNMM 522
Query: 356 LQGH-LGKRG------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
++ + LG R RKG P VN T+F+ G ++ G+ +A K++E ++ +G
Sbjct: 523 MKSYFLGGRNYAMGCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPAEACKFLEEMIQKG 582
Query: 403 VEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLADIFQRYGKKMATRERR 458
++ P+ DYNKF +S + E+ +K++ G D++++F ++ ++M R ++
Sbjct: 583 MKAPQIDYNKFAADFSKAGKPDILYELAQKVKFTGKFDVSNVFHQWAERMKNRVKK 638
>gi|226509960|ref|NP_001150456.1| LOC100284086 [Zea mays]
gi|195639404|gb|ACG39170.1| ATP binding protein [Zea mays]
Length = 634
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 134/476 (28%), Positives = 253/476 (53%), Gaps = 20/476 (4%)
Query: 1 APVDPGHLVRVCTILYQQQYS-PESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLF 59
A +P + RVC + S ++ L ++LS+ + L L + + F + RP Y F
Sbjct: 155 AASNPEGVDRVCAAIADVVASGADANLEAALSALSPPLCEAVVLAVLHRFKHAHRPSYRF 214
Query: 60 FQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLA 119
F++ + F H +IT+ +M+ I+GK+R + +QEMG+ ++ FK+A+ + A
Sbjct: 215 FRWATVSG-GFTHTTITYCKMLHILGKTRQFESMVAMIQEMGKAGALSMDAFKVAIKSFA 273
Query: 120 EVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIA 179
E+K V F +M G + +E N ++ L + L EA+ + K+ P+ +
Sbjct: 274 AAGEIKNAVGVFELMRKNGFDDGVESFNCLLVALAKEGLGREARQVFDKMHGQYSPDLRS 333
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
Y L+ +C+ +L+EA ++WN M ++G +P + V + MIE + + EA+K+F++M+
Sbjct: 334 YTALMLAWCNARNLVEAGRVWNEMLEKGMDPDVVVHNTMIEGLLRGQRRPEAVKMFELMK 393
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
K + TY ++I CK+GK+ A EEM + + D T + ++ G ++
Sbjct: 394 AKG-PPPNVWTYTMLIRDHCKQGKMDMAMECFEEMQEAKCQPDVATYTCLLVGYGNAKQM 452
Query: 300 REAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
V+EE+ + PD Y+ LIK L +A +++++MIK+G EPT+HTY M+
Sbjct: 453 DRVTAVLEEMTQKGCPPDARTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMM 512
Query: 356 LQGH-LGKRG------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
++ + +G ++G P VN T+F+ ++ G+ +A KY+E ++N+G
Sbjct: 513 MKSYFVGDSNYAMGCAVWEEMHQRGICPDVNSYTVFINRHIRHGRPEEAYKYIEEMINKG 572
Query: 403 VEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLADIFQRYGKKMATRERR 458
++ P+ DYNKF +S + E+ +K++ G D++++F ++ +M +R +R
Sbjct: 573 MKAPQIDYNKFAADFSKAGKPDILFELAQKVKFAGKLDVSNVFYQWADRMKSRVKR 628
>gi|125551971|gb|EAY97680.1| hypothetical protein OsI_19602 [Oryza sativa Indica Group]
Length = 586
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 133/439 (30%), Positives = 228/439 (51%), Gaps = 26/439 (5%)
Query: 5 PGHLVRVCTILYQQQYSPES-----RLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLF 59
P H+ RVC + + L ++L++ + L+ L + + F + RP + F
Sbjct: 144 PEHVGRVCAAIADVVAAGAGAGADASLEAALTALSPPLSETLVLAVLDRFKHAHRPSHRF 203
Query: 60 FQYTQKA---QPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALM 116
F++ A FAH +IT+ +MV I+GK+R +QEMG+ + FKIA+
Sbjct: 204 FRWAAAAAAASGGFAHTTITYCKMVHILGKARQFQSMVALIQEMGKEGALCMDAFKIAIK 263
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPN 176
+ A E+K V F +M G + +E N ++ L Q L EA + ++ + P+
Sbjct: 264 SFAAAGEIKNAVGVFEMMRTHGFDDGVESFNCLLVALAQEGLGREANQVFDRMRDRYAPD 323
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
+Y L+ +C+ +L+EA ++WN M + G +P + V + MIE + + EA+K+F+
Sbjct: 324 LRSYTALMLAWCNARNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFE 383
Query: 237 MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR 296
+M+ K + TY ++I CKRGK+ A EEM G + D T + ++ G
Sbjct: 384 LMKAKG-PAPNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNA 442
Query: 297 GRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
R+ ++EE+ + PD Y+ LIK L +A +++++MIK+G EPT+HTY
Sbjct: 443 KRMDRVTALLEEMTQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTY 502
Query: 353 IMLLQGH-LGKRG------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVM 399
M+++ + LG R RKG P VN T+F+ G ++ G+ +A KY+E ++
Sbjct: 503 NMMMKSYFLGGRNYMMGCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPEEACKYIEEMI 562
Query: 400 NRGVEVPRFDYNKFLHYYS 418
+G++ P+ DYNKF +S
Sbjct: 563 QKGMKTPQIDYNKFAADFS 581
>gi|296081511|emb|CBI20034.3| unnamed protein product [Vitis vinifera]
Length = 596
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 129/463 (27%), Positives = 243/463 (52%), Gaps = 35/463 (7%)
Query: 3 VDPGHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQY 62
DP + RVC ++ + ++ + + + L CN +L+H + + F + +P + FF +
Sbjct: 155 ADPEEVSRVCRVI-DELFALDRNMEAVLDECNVDLSHALVVGVLERFKHARKPAFRFFCW 213
Query: 63 T-QKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEV 121
QKA F HNS T+N M+ ++G++R + L EMG + L+ +TF IA+ A
Sbjct: 214 AGQKAG--FTHNSRTYNAMMSVLGRTRQFESMMGMLGEMGEKGLLTMETFSIAIKAFAAA 271
Query: 122 RELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYG 181
+E KK V F +M + ++ +N ++ L + KL EA+ L KL + PN Y
Sbjct: 272 KERKKAVGVFELMKRYNFDAGVDTINCLLDNLGRAKLGKEAQALFEKLEDRFTPNLRTYT 331
Query: 182 WLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK 241
L+ G+C + +L+EA + WN M D+GF+P I M+E K K +A+K+F++M+ K
Sbjct: 332 VLLNGWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAK 391
Query: 242 RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
+ TY I+I +CK+ K+ +A +EM G + D + +I G + ++ +
Sbjct: 392 G-PSPNVRTYTILIRDLCKQMKMQEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDK 450
Query: 302 AYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
Y +++E+++ D Y+ LIK + + +A +++++MI+ G + T+HTY M+++
Sbjct: 451 VYALLKEMKEKGCPADGRTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQSTLHTYNMMMK 510
Query: 358 GHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
+ R N++ + A+ +E +G++ P+ DYNKF +
Sbjct: 511 SYFYTR---------NYE-------------MGCAEMIE----KGMKAPQLDYNKFAADF 544
Query: 418 SNEEGVVMFEEVGKKLREVGLADLADIFQRYGKKMATRERRRN 460
S + EE+ +K++ G +++++F R+ + M R +RR+
Sbjct: 545 SRAGKPDILEELARKMKFEGKFEVSNVFARWAEMMKKRVKRRD 587
>gi|222631252|gb|EEE63384.1| hypothetical protein OsJ_18196 [Oryza sativa Japonica Group]
Length = 378
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 196/366 (53%), Gaps = 18/366 (4%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
FKIA+ + A E+K V F +M G + +E N ++ L Q L EA + ++
Sbjct: 3 AFKIAIKSFAAAGEIKNAVGVFEMMRTHGFDDGVESFNCLLVALAQEGLGREANQVFDRM 62
Query: 170 SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD 229
+ P+ +Y L+ +C+ +L+EA ++WN M + G +P + V + MIE + +
Sbjct: 63 RDRYAPDLRSYTALMLAWCNARNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQRRP 122
Query: 230 EAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSI 289
EA+K+F++M+ K + TY ++I CKRGK+ A EEM G + D T + +
Sbjct: 123 EAVKMFELMKAKG-PAPNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCL 181
Query: 290 IYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGC 345
+ G R+ ++EE+ + PD Y+ LIK L +A +++++MIK+G
Sbjct: 182 LVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGL 241
Query: 346 EPTMHTYIMLLQGH-LGKRG------------RKGPDPLVNFDTIFVGGLVKAGKSLDAA 392
EPT+HTY M+++ + LG R RKG P VN T+F+ G ++ G+ +A
Sbjct: 242 EPTIHTYNMMMKSYFLGGRNYMMGCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPEEAC 301
Query: 393 KYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLADIFQRYGKKM 452
KY+E ++ +G++ P+ DYNKF +S + E+ +K++ G D +++F ++ ++M
Sbjct: 302 KYIEEMIQKGMKTPQIDYNKFAADFSKAGKPDILYELAQKVKFTGKFDASNVFHQWAERM 361
Query: 453 ATRERR 458
R +R
Sbjct: 362 KKRVKR 367
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 107/244 (43%), Gaps = 20/244 (8%)
Query: 212 IDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTML 271
+D I++F + A+ VF+MMR DD G+ ++ ++ + + G +A +
Sbjct: 1 MDAFKIAIKSFAAAGEIKNAVGVFEMMRTHGFDD-GVESFNCLLVALAQEGLGREANQVF 59
Query: 272 EEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRL 327
+ M R D + ++++ L EA +V E+ KPD+ +++ +I+GLLR
Sbjct: 60 DRMRDR-YAPDLRSYTALMLAWCNARNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLRG 118
Query: 328 RRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK-------------GPDPLVNF 374
+R EA ++F M +G P + TY ML++ H KRG+ G P V
Sbjct: 119 QRRPEAVKMFELMKAKGPAPNVWTYTMLIRDHC-KRGKMDMAMRCFEEMQDVGCQPDVAT 177
Query: 375 DTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLR 434
T + G A + +E + +G YN + +N + KK+
Sbjct: 178 YTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMI 237
Query: 435 EVGL 438
+ GL
Sbjct: 238 KKGL 241
>gi|356557763|ref|XP_003547180.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g14820, mitochondrial-like [Glycine max]
Length = 492
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/473 (23%), Positives = 221/473 (46%), Gaps = 67/473 (14%)
Query: 3 VDPGHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQY 62
DP + RVC ++ + ++ + + + L C L+H+ + + F + P + FF +
Sbjct: 61 ADPAEVERVCKVI-DELFALDRNMEAVLDECGVRLSHDLVVDMLQRFKHA-XPAFRFFCW 118
Query: 63 TQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVR 122
K +P F H+S T+N M+ ++G++R + L+EMG L+ +TF +A+ T AE
Sbjct: 119 AGK-RPGFDHDSRTYNCMMCVLGRTRQFETMVAMLEEMGEMGLLTMETFSVAIKTFAEAN 177
Query: 123 ELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGW 182
+ KK F +M + ++++N ++ +L KL EA+ + K
Sbjct: 178 QRKKAAGIFDLMKKYEFKVGVDVINFLLDSLSAAKLGKEAQAVFEK-------------- 223
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
++WN M D GF+P I + M+E K K D A K+F++M+ K
Sbjct: 224 ---------------RVWNEMIDRGFKPDIVAHNVMLEGLLKCKKSD-AXKLFEIMKAK- 266
Query: 243 MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
+ +Y I+I CK+ + + ++EM R + D + +I G + ++
Sbjct: 267 CPSPNVRSYTIMIQDFCKQKMMGEVVEYIDEMVDRECQPDAALYTCLITGFGXKKKMDMV 326
Query: 303 YKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
Y +++E+ K PD Y+ LIK + +A +++++M + G +PT+HTY M+++
Sbjct: 327 YNLLKEMRKRGCSPDGGTYNALIKLXTSQQMPDDAVRIYKKMSQSGIKPTIHTYNMIMRS 386
Query: 359 HLGKRG------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
+ + +KG P N ++++G ++ +G++ P
Sbjct: 387 YFVTKNYEIGHAIWDXMHQKGCCPDDNSYSVYIG-----------------MLEKGMKAP 429
Query: 407 RFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLADIFQRYGKKMATRERRR 459
+ DYNK S V+ EE+ +K+ VG ++++++ + M +RR
Sbjct: 430 QLDYNKCASDISKIGNAVILEELARKMNFVGKSEVSNVLASWADMMKKSAKRR 482
>gi|7340725|emb|CAB82968.1| putative protein [Arabidopsis thaliana]
Length = 308
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 164/310 (52%), Gaps = 19/310 (6%)
Query: 171 EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDE 230
E PN + Y L+ G+C V +LIEA++IWN M D G +P I + M+E + K +
Sbjct: 1 ERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSD 60
Query: 231 AMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
A+K+F +M+ K + +Y I+I CK+ + A ++M G++ D + +I
Sbjct: 61 AIKLFHVMKSKG-PCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLI 119
Query: 291 YGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
G + +L Y++++E+++ PD Y+ LIK + + T+++ +MI+ E
Sbjct: 120 TGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIE 179
Query: 347 PTMHTYIMLLQGHLGKRG------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKY 394
P++HT+ M+++ + R +KG P N T+ + GL+ GKS +A +Y
Sbjct: 180 PSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRY 239
Query: 395 VERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLADIFQRYGKKMAT 454
+E ++++G++ P DYNKF + +FEE+ ++ + G A+IF R+ + T
Sbjct: 240 LEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEIFARWAQ--MT 297
Query: 455 RERRRNRAIE 464
R R + R +E
Sbjct: 298 RRRCKQRFME 307
>gi|357444525|ref|XP_003592540.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481588|gb|AES62791.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 507
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 111/459 (24%), Positives = 215/459 (46%), Gaps = 28/459 (6%)
Query: 2 PVDPGHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQ 61
P +P H +C IL +PES + SL + ++ E + + N + FF+
Sbjct: 53 PNNP-HAETICRIL---STTPESPVDVSLRNFPVEVSPELVVAVLNKLSNAGILALSFFR 108
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEV 121
+ +K Q F HN+ F+ +++ +GK R + W + EM +R+L+N TF +
Sbjct: 109 WAEKQQ-GFNHNTEIFHALIEALGKIRQFKMIWNLVDEMKQRKLLNGDTFSLIARRYVRA 167
Query: 122 RELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVE-AKYLILKLSEW-IKPNEIA 179
+ +K+ + F M G + + NK++ LC+ K VE A+ L K+ +W ++PN +
Sbjct: 168 KVIKEALKTFERMEKYGLKPQISDFNKLIDVLCKSKFHVEKAQELFDKMRQWNLEPNLKS 227
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
Y LI+G+ +L++ ++ M D+GF+P + +I + K K DEA+ ++ M
Sbjct: 228 YTILIEGWSQQQNLLKVDEVCREMKDDGFQPDVVTYGIIINAYCKAKKYDEAIGIYHDML 287
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
K ++ Y I + ++ +A+ E+ G + T ++++ R+
Sbjct: 288 SKNVNP-SPHIYCTFITGLGNGSRMDEAFEFFEKSKASGFPPEAPTYNAVVSAYCWSMRI 346
Query: 300 REAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKR-GCEPTMHTYIM 354
+AY++V E+++ P+ Y ++ L++ R +EA VF+ M GCEP++ TY +
Sbjct: 347 DDAYRIVGEMKELGIGPNARTYDIILVHLIKGGRTKEAYSVFQRMSSETGCEPSVSTYAI 406
Query: 355 LLQGHLGKR------------GRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
+++ + KG P ++ + + L K DA +Y +++++ G
Sbjct: 407 MVRMFCNENQLDMAMVVWNEMKDKGILPGIHMFSTLIISLCHENKLDDACRYFQQMLDVG 466
Query: 403 VEVPRFDYNKF---LHYYSNEEGVVMFEEVGKKLREVGL 438
+ ++ F L E V+ F + KLR L
Sbjct: 467 IRPTANMFSAFKRALMAAGMENTVIHFAKKVDKLRNTPL 505
>gi|116791998|gb|ABK26193.1| unknown [Picea sitchensis]
Length = 262
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/258 (34%), Positives = 144/258 (55%), Gaps = 17/258 (6%)
Query: 218 MIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKR 277
M+ FK K DEA+K+F +M++ S Y IVI + K K+ +A EM +
Sbjct: 1 MLGGLFKGRKKDEALKLFGLMKINGPYPDSKS-YTIVIRALSKLQKMEEASKFFAEMQEH 59
Query: 278 GIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP----DISLYHGLIKGLLRLRRAREA 333
G D + +I G +L +AY +++E+++ D Y+ LIK ++ L + EA
Sbjct: 60 GSPLDAAVYTCMITGYGNTKKLDKAYVLLQEMKEKGIPHDCRTYNALIKVMMVLHKPDEA 119
Query: 334 TQVFREMIKRGCEPTMHTYIMLLQGHLGKR------------GRKGPDPLVNFDTIFVGG 381
T++F +M + G +PT+HTY ML++ + R R G P VN T+F+GG
Sbjct: 120 TKLFEKMSQCGFQPTIHTYNMLMKLYFRARNPEMGFAIWDQMARNGCCPDVNSYTVFIGG 179
Query: 382 LVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADL 441
L++ G+S +A Y+E ++++G++ PRFDYNKFL +S +FEE+ K++ G D+
Sbjct: 180 LIREGRSEEACAYIESMIDKGMKAPRFDYNKFLADFSRAGRPDIFEELAAKMKHAGKLDI 239
Query: 442 ADIFQRYGKKMATRERRR 459
+D+F R +KM TR + R
Sbjct: 240 SDVFLRRSQKMKTRVKIR 257
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 74/166 (44%), Gaps = 10/166 (6%)
Query: 149 VVKTLCQRKLVVEAKYLILKLSEWIKPNEIA-YGWLIKGYCDVGDLIEASKIWNLMTDEG 207
V++ L + + + EA ++ E P + A Y +I GY + L +A + M ++G
Sbjct: 36 VIRALSKLQKMEEASKFFAEMQEHGSPLDAAVYTCMITGYGNTKKLDKAYVLLQEMKEKG 95
Query: 208 FEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG----LSTYRIVIDWMCKRGK 263
+ +I+ ++K DEA K+F+ +M G + TY +++ +
Sbjct: 96 IPHDCRTYNALIKVMMVLHKPDEATKLFE-----KMSQCGFQPTIHTYNMLMKLYFRARN 150
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
+ + ++M + G D + + I GL+ GR EA +E +
Sbjct: 151 PEMGFAIWDQMARNGCCPDVNSYTVFIGGLIREGRSEEACAYIESM 196
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 174/375 (46%), Gaps = 24/375 (6%)
Query: 68 PCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKT-FKIALMTLAEVRELKK 126
P N T+ ++ + KS ++D E L+EM V D + + L + R K
Sbjct: 53 PGITPNVFTYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAK 112
Query: 127 MVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIK 185
+++F M CE ++ ++ LC+ + EA K+ + PNE Y LI
Sbjct: 113 ALDYFRSME---CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLIN 169
Query: 186 GYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD 245
G+C V + A + M + G P++ +I F + K D A K+F+ M V+
Sbjct: 170 GFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQM-VENGCM 228
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
L TY ++ +C+ G + +AY +L+EM +RG++ D + +++ GL G++ A KV
Sbjct: 229 PNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKV 288
Query: 306 VEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG 361
E+ PD+ Y LI GL + R EA ++F +M + CEP + T+ L+ G L
Sbjct: 289 FEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDG-LC 347
Query: 362 KRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRF 408
K R + P V + + GL K G+ DA + +R++ RG+E
Sbjct: 348 KGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVV 407
Query: 409 DYNKFLHYYSNEEGV 423
YN +H + GV
Sbjct: 408 TYNSLIHGFCMTNGV 422
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 184/440 (41%), Gaps = 65/440 (14%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
N T+N +++ K + + L+EM L N T+ + ++ F
Sbjct: 160 NEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLF 219
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
M + GC +L N ++ LC+ L+ EA L+ ++ E ++P++ +Y L+ G C
Sbjct: 220 RQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKT 279
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR----------- 239
G + A K++ ++ P + +I K + DEA K+F+ MR
Sbjct: 280 GKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTF 339
Query: 240 -------------------VKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFK 276
++ M+D + TY +ID +CK G++ A + + M
Sbjct: 340 TALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIV 399
Query: 277 RGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRARE 332
RGIE + +T +S+I+G + A ++EE+ PDI Y+ LI GL + RA E
Sbjct: 400 RGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPE 459
Query: 333 ATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKG---------------PDPLVNFDTI 377
A ++F +M + C P + TY L+ G K R PD +V F T+
Sbjct: 460 ANRLFGDMKAKFCNPDVITYSCLIGGFC-KLERIDMARTLFDDMLKQAVLPD-VVTFSTL 517
Query: 378 FVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVG 437
V G AG DA + +E ++ + Y + + +V V K++ + G
Sbjct: 518 -VEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRG 576
Query: 438 L-------ADLADIFQRYGK 450
L D F R GK
Sbjct: 577 CQPNVVTYTALIDAFCRAGK 596
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 163/379 (43%), Gaps = 28/379 (7%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHI 133
+TF ++D + K + + L+ M R N T+ + L + +++ F
Sbjct: 337 VTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKR 396
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M G E ++ N ++ C V A L+ +++ P+ I Y LI G C G
Sbjct: 397 MIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGR 456
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ-MMRVKRMDDLGLSTY 251
EA++++ M + P + +I F K+ + D A +F M++ + D+ T+
Sbjct: 457 APEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDV--VTF 514
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK 311
+++ C G + A +LEEM D T +S++ G GR+ EA +V++ + K
Sbjct: 515 STLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAK 574
Query: 312 ----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG----KR 363
P++ Y LI R + A ++ EM+ G +P + TY L+ G G +
Sbjct: 575 RGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEE 634
Query: 364 GRKGPDPLVNFDT---------IFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
RK + L + + + GL + G+ A + +E + G PR D
Sbjct: 635 ARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTP-PRHDI---- 689
Query: 415 HYYSNEEGVVMFEEVGKKL 433
Y + G+ +E+GK +
Sbjct: 690 -YVALIRGLCQGKELGKAM 707
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 120/274 (43%), Gaps = 7/274 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
IT++ ++ K ID+ +M ++ ++ D TF + +
Sbjct: 477 ITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEE 536
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M C + +V C+ +VEA+ ++ ++++ +PN + Y LI +C G
Sbjct: 537 MVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGK 596
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
A ++ M G +P++ +I F +EA K+ + + + YR
Sbjct: 597 PTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYR 656
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI--- 309
+++D +C+ G++S A +LE + + G + ++I GL L +A +V+EE+
Sbjct: 657 VMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLS 716
Query: 310 --EKPDISLYHGLIKGLLRLRRAREATQVFREMI 341
+P+ Y +I+ L R R EA + E++
Sbjct: 717 RKSRPNAEAYEAVIQELAREGRHEEANALADELL 750
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 170/372 (45%), Gaps = 32/372 (8%)
Query: 58 LFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALM 116
L F+ K P +S+T+N M++ + KS +D L+EM N ++ L
Sbjct: 31 LHFREMSKTCP---PDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLH 87
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKP 175
+ ++ + M GC + V+ LC+ V EA ++ K+ + +P
Sbjct: 88 GFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQP 147
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
N I YG L+ G+C VGDL A ++ MT+ G+ P+ + ++ K D A+++F
Sbjct: 148 NVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLF 207
Query: 236 QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
+ M + TY ++D + K GK+ A ++E M +G + +T SS+++GL
Sbjct: 208 KEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCK 267
Query: 296 RGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
G+L EA +++ + + P+I Y+ +I G +L R EA + EM+ GC+P + T
Sbjct: 268 AGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVT 327
Query: 352 YIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
Y +LL K GK+ DA VE ++ +G F YN
Sbjct: 328 YTVLLD-----------------------AFCKCGKAEDAIGLVEVMVEKGYVPNLFTYN 364
Query: 412 KFLHYYSNEEGV 423
L + ++ V
Sbjct: 365 SLLDMFCKKDEV 376
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 150/307 (48%), Gaps = 9/307 (2%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMT 117
F+ +++ C + T++ +VD + KS +D ++ M + N T+ L
Sbjct: 206 LFKEMEESGSC-PPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHG 264
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPN 176
L + +L + M GC ++ N ++ C+ + EA +L+ ++ + +PN
Sbjct: 265 LCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPN 324
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
+ Y L+ +C G +A + +M ++G+ P++ + +++ F K ++ + A ++
Sbjct: 325 VVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLS 384
Query: 237 MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR 296
M +++ + +Y VI +CK K+ + +LE+M D +T ++II +
Sbjct: 385 SM-IQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKT 443
Query: 297 GRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMI-KRGCEPTMHT 351
R+ AY++ I++ P++ Y+ L+ GL + RR +A + REM K+GC P + T
Sbjct: 444 YRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIIT 503
Query: 352 YIMLLQG 358
Y ++ G
Sbjct: 504 YNTVIDG 510
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 151/328 (46%), Gaps = 27/328 (8%)
Query: 148 KVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEG 207
+++ LC +A ++S+ P+ + Y +I G L +A ++ M D G
Sbjct: 15 SILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNG 74
Query: 208 FEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQA 267
F P++ + ++ F K N+ + A+ + + M V R + +Y VI+ +CK ++ +A
Sbjct: 75 FAPNVFSYNTVLHGFCKANRVENALWLLEQM-VMRGCPPDVVSYTTVINGLCKLDQVDEA 133
Query: 268 YTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKG 323
++++M +RG + + +T +++ G G L A ++V ++ +P+ Y+ ++ G
Sbjct: 134 CRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHG 193
Query: 324 LLRLRRAREATQVFREMIKRG-CEPTMHTYIMLLQGHLGKRGR-------------KGPD 369
L R+ A Q+F+EM + G C P + TY ++ L K G+ KG
Sbjct: 194 LCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDS-LVKSGKVDDACRLVEAMVSKGCS 252
Query: 370 PLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN----EEGVVM 425
P V + + GL KAGK +A ++R+ G YN + + +E +
Sbjct: 253 PNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHL 312
Query: 426 FEEV---GKKLREVGLADLADIFQRYGK 450
EE+ G + V L D F + GK
Sbjct: 313 LEEMVDGGCQPNVVTYTVLLDAFCKCGK 340
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 166/389 (42%), Gaps = 29/389 (7%)
Query: 73 NSITFNRMVDI---IGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
N +T+ ++D GK+ + E + E G + N T+ L + E+++
Sbjct: 324 NVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGY--VPNLFTYNSLLDMFCKKDEVERACQ 381
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYC 188
M GC ++ N V+ LC+ V E L+ + LS P+ + + +I C
Sbjct: 382 LLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMC 441
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
+ A +++NL+ + G P++ + ++ K + D+A + + M K+ +
Sbjct: 442 KTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDI 501
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY VID +CK ++ +AY + +M G+ D++T S +I L + EA V+E
Sbjct: 502 ITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLEL 561
Query: 309 IEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
+ K P Y LI G + +A ++ + ++ +G P + T+ + + L KRG
Sbjct: 562 MLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFID-WLSKRG 620
Query: 365 R---KG------------PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFD 409
R G PD V ++T+ G A ++ DA E + G E
Sbjct: 621 RLRQAGELLETMLRAGLVPDT-VTYNTLL-KGFCDASRTEDAVDLFEVMRQCGCEPDNAT 678
Query: 410 YNKFL-HYYSNEEGVVMFEEVGKKLREVG 437
Y + H + + EV K + + G
Sbjct: 679 YTTLVGHLVDKKSYKDLLAEVSKSMVDTG 707
>gi|449465535|ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Cucumis sativus]
Length = 542
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 99/440 (22%), Positives = 212/440 (48%), Gaps = 25/440 (5%)
Query: 21 SPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRM 80
+P S + S L L+ +++ + FF++ +K Q F H + ++N +
Sbjct: 104 NPNSCIESLLDGAPMELSPALIVEVLKKLSNAGFLALSFFRWAEK-QKGFKHTTESYNLL 162
Query: 81 VDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCE 140
++ +GK + ++ W + +M R+ +++ +TF + A R++K+ V F M G +
Sbjct: 163 IEALGKIKQFNVIWNLVSDMKRKGILSRETFALITRRYARARKVKEAVESFEKMEKFGFQ 222
Query: 141 YSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKI 199
+ N+++ TLC+ + V +A+ + K+ KP+ +Y L++G+ +L++ +++
Sbjct: 223 MGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTILLEGWGQDQNLLKLNEV 282
Query: 200 WNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMC 259
+ M DEGFEP + +I K K DEA+++F M K + + +I+ +
Sbjct: 283 YREMRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKP-SPHVFCTLINGLG 341
Query: 260 KRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDIS 315
++ +A E++ G + T ++++ ++ AY++V+E+ K P+
Sbjct: 342 SEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSR 401
Query: 316 LYHGLIKGLLRLRRAREATQVFREMIKR-GCEPTMHTYIMLLQGHLGKR----------- 363
Y ++ L++ R+++EA VF+ M + GCEPT+ TY ++++ +
Sbjct: 402 TYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDE 461
Query: 364 -GRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNK----FLHYYS 418
KG P ++ + + L K DA Y + +++ G+ P ++ L
Sbjct: 462 MKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRPPATMFSNLKQALLDDGR 521
Query: 419 NEEGVVMFEEVGKKLREVGL 438
+ ++M E++ KKLR+ L
Sbjct: 522 KDTALLMAEKI-KKLRKAPL 540
>gi|357128238|ref|XP_003565781.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Brachypodium distachyon]
Length = 547
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 196/416 (47%), Gaps = 25/416 (6%)
Query: 10 RVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPC 69
RVC ++ Q PE R+ S+L + N++ E ++ N + FF++ ++ Q
Sbjct: 101 RVCRVVSSQ---PEPRIASALDALGVNMSPELVAEVLRNLSNAGILALAFFRWAERQQG- 156
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
F + + +F+ +++ +GK + L W ++ M R L++ TF++ + A R++K+ V
Sbjct: 157 FRYTAESFHNLIEALGKIKQFRLVWSLVEAMRCRGLLSKDTFRLIVRRYARARKVKEAVE 216
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI--LKLSEWIKPNEIAYGWLIKGY 187
F M+ G + L N ++ L + K V +A + +K + P+ Y L++G+
Sbjct: 217 TFEKMSSFGLKADLSDYNWLIDVLSKSKQVKKAHAIFKEMKRNGRFVPDLKTYTVLMEGW 276
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
DL+ ++ M D G +P + +I +F K K DEA+KVF+ M
Sbjct: 277 GHEKDLLMLKSVYQEMLDAGIKPDVVAYGTLISSFCKSGKCDEAIKVFREMEANGCMP-S 335
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
Y ++I+ + ++ +A E G + T ++++ + + A+K+V+
Sbjct: 336 PHVYCMLINGLGSEERLDEALKYFELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVD 395
Query: 308 EIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
E+ K P+ Y +++ L++ ++ EA VF+ M GCEP ++TY M++ G
Sbjct: 396 EMRKTGIGPNARTYDIILQYLIKSQKIEEAYNVFQRMGMEGCEPQLNTYTMMV-GMFCSN 454
Query: 364 GR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
R KG P ++ + + GL + +A Y + ++++G+ P
Sbjct: 455 ERVDMALKVWKQMKEKGVLPCMHMFSSLINGLCFENRLEEACVYFQEMLDKGIRPP 510
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 96/230 (41%), Gaps = 3/230 (1%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALMTLAEVRELKKMVNFFHI 133
+ + ++ KS D + +EM + + + + + L L + + +F +
Sbjct: 302 VAYGTLISSFCKSGKCDEAIKVFREMEANGCMPSPHVYCMLINGLGSEERLDEALKYFEL 361
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
G + N VV C+ A ++ ++ + I PN Y +++
Sbjct: 362 SKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKTGIGPNARTYDIILQYLIKSQK 421
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ EA ++ M EG EP ++ M+ F + D A+KV++ M+ K + + +
Sbjct: 422 IEEAYNVFQRMGMEGCEPQLNTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPC-MHMFS 480
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
+I+ +C ++ +A +EM +GI S++ L+ GR+ A
Sbjct: 481 SLINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALIEGGRISLA 530
>gi|449503427|ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g71060, mitochondrial-like [Cucumis sativus]
Length = 542
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 91/404 (22%), Positives = 196/404 (48%), Gaps = 20/404 (4%)
Query: 21 SPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRM 80
+P S + S L L+ +++ + FF++ +K Q F H + ++N +
Sbjct: 104 NPNSCIESLLDGAPMELSPALIVEVLKKLSNAGFLALSFFRWAEK-QKGFKHTTESYNLL 162
Query: 81 VDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCE 140
++ +GK + ++ W + +M R+ +++ +TF + A R++K+ V F M G +
Sbjct: 163 IEALGKIKQFNVIWNLVSDMKRKGILSRETFALITRRYARARKVKEAVESFEKMEKFGFQ 222
Query: 141 YSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKI 199
+ N+++ TLC+ + V +A+ + K+ KP+ +Y L++G+ +L++ +++
Sbjct: 223 MGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTILLEGWGQDQNLLKLNEV 282
Query: 200 WNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMC 259
+ M DEGFEP + +I K K DEA+++F M K + + +I+ +
Sbjct: 283 YREMRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKP-SPHVFCTLINGLG 341
Query: 260 KRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDIS 315
++ +A E++ G + T ++++ ++ AY++V+E+ K P+
Sbjct: 342 SEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSR 401
Query: 316 LYHGLIKGLLRLRRAREATQVFREMIKR-GCEPTMHTYIMLLQGHLGKR----------- 363
Y ++ L++ R+++EA VF+ M + GCEPT+ TY ++++ +
Sbjct: 402 TYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDE 461
Query: 364 -GRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
KG P ++ + + L K DA Y + +++ G+ P
Sbjct: 462 MKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRPP 505
>gi|357480939|ref|XP_003610755.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512090|gb|AES93713.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 596
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 102/410 (24%), Positives = 188/410 (45%), Gaps = 19/410 (4%)
Query: 10 RVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPC 69
++ T L +Q++S + +L F +++ +Q+ F W Y FF + +K P
Sbjct: 148 KISTFLKEQRHSSHDHVVQALDGSGFRVSNSLVMQVLKRFGNDWVAAYGFFIWAKKQTP- 206
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGR-RRLVNDKTFKIALMTLAEVRELKKMV 128
+ H+ +N MVDI+GK++ DL W+ ++EM R V T + A+ + + V
Sbjct: 207 YVHSPEVYNLMVDILGKAKEFDLMWKLVKEMKRIEGYVCLDTMSKVMRRFAKAQRHEDAV 266
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYC 188
F M G E LNK++ L + + + A ++ + + + ++ LI G+C
Sbjct: 267 EAFRGMGKYGVEKDTAALNKLLDALVKGQSIEIAHNVLDEFKSSVPLSSPSFNILINGWC 326
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
V + +A K+ + GFEP + + IE++ + +V + MR +
Sbjct: 327 KVRNFEKARKVMEERKEHGFEPDVFTYNNFIESYCHDKDFRKVDEVLEEMRGNGCPPNAV 386
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY I++ K G++S+A E M K GI D SS++Y L GRL++A +V ++
Sbjct: 387 -TYTILLLGYGKAGQLSKALEEYERMKKDGIVPDTPFYSSLMYILGKAGRLKDACEVFDD 445
Query: 309 IEKP----DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH----- 359
+ K D+ Y+ +I + A ++ +EM + C+P + TY LL+
Sbjct: 446 MPKQGVVRDVVTYNTMISTACAHSKEETALRLLKEMEETSCKPDLQTYHPLLKMCCKKKR 505
Query: 360 -------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
L + P T+ V L +GK ++A + E ++++G
Sbjct: 506 MKVLKFLLDHMFKHDLCPDRGTYTLLVQSLSNSGKLVEACTFFEEMVSKG 555
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 58/290 (20%), Positives = 113/290 (38%), Gaps = 37/290 (12%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
++ N+++D + K ++I++ L E ++ +F I + +VR +K
Sbjct: 280 DTAALNKLLDALVKGQSIEIAHNVLDEFKSSVPLSSPSFNILINGWCKVRNFEKARKVME 339
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVG 191
+ G E + N +++ C K + ++ ++ PN + Y L+ GY G
Sbjct: 340 ERKEHGFEPDVFTYNNFIESYCHDKDFRKVDEVLEEMRGNGCPPNAVTYTILLLGYGKAG 399
Query: 192 DLIEASKIWNLMTDEGFEPSI---------------------------------DVV--D 216
L +A + + M +G P DVV +
Sbjct: 400 QLSKALEEYERMKKDGIVPDTPFYSSLMYILGKAGRLKDACEVFDDMPKQGVVRDVVTYN 459
Query: 217 KMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFK 276
MI T +K++ A+++ + M L TY ++ CK+ ++ +L+ MFK
Sbjct: 460 TMISTACAHSKEETALRLLKEMEETSCKP-DLQTYHPLLKMCCKKKRMKVLKFLLDHMFK 518
Query: 277 RGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISLYHGLIKGLLR 326
+ D T + ++ L G+L EA EE+ + +K L R
Sbjct: 519 HDLCPDRGTYTLLVQSLSNSGKLVEACTFFEEMVSKGFTPMETTVKLLTR 568
>gi|449431996|ref|XP_004133786.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Cucumis sativus]
gi|449477985|ref|XP_004155184.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Cucumis sativus]
Length = 485
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 173/390 (44%), Gaps = 25/390 (6%)
Query: 25 RLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDII 84
++ + L C ++ E + + + W + FF + K QP +AH+ ++ M+ I+
Sbjct: 29 QVRNKLEHCFIKVSGELVVAVLSRIRNDWEAAFTFFVWAGK-QPGYAHSVREYHSMISIL 87
Query: 85 GKSRNIDLFWETLQEM----GRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCE 140
GK R D W + EM LV +T I + V ++ K +N F+ G
Sbjct: 88 GKMRKFDTAWALIDEMRGGTPGSSLVTPQTLLIMIRRYCAVHDVAKAINTFYAHKRFGFN 147
Query: 141 YSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIW 200
LE ++ LC+ K V +A+YL+ + N ++ ++ G+C +G L + ++W
Sbjct: 148 IGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPFNTKSFNIILNGWCVIGSLRDTERVW 207
Query: 201 NLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCK 260
MT G I + K+ + +++F+ M+ ++D Y VI + K
Sbjct: 208 KEMTRRGISHDAVSYASCISCYSKVRNLHKVLRLFEDMKRMKIDP-DRKVYNAVIHSLAK 266
Query: 261 RGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISL 316
+ +A +++ M ++GI A+ +T +S+I L R EA V EE+ + P I
Sbjct: 267 GRCLKEAADLIKTMEEKGIIANVVTYNSVIKPLCKARRFDEARAVFEELLQRGLCPTIQT 326
Query: 317 YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR------------G 364
YH ++ LR E ++ ++M GC PT TYIML++ R
Sbjct: 327 YHAFLRF---LRTEEEIFELLKKMRTMGCNPTTDTYIMLIRKFCRWRQLDNVSRIWHEMS 383
Query: 365 RKGPDPLVNFDTIFVGGLVKAGKSLDAAKY 394
G P + + + GL GK DA KY
Sbjct: 384 ENGISPDRSSYIVLIHGLFLNGKLEDAHKY 413
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 124/254 (48%), Gaps = 20/254 (7%)
Query: 70 FAHNSITFNRMVD---IIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELK 125
F N+ +FN +++ +IG R+ + W +EM RR + +D ++ + ++VR L
Sbjct: 180 FPFNTKSFNIILNGWCVIGSLRDTERVW---KEMTRRGISHDAVSYASCISCYSKVRNLH 236
Query: 126 KMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLI 184
K++ F M + ++ N V+ +L + + + EA LI + E I N + Y +I
Sbjct: 237 KVLRLFEDMKRMKIDPDRKVYNAVIHSLAKGRCLKEAADLIKTMEEKGIIANVVTYNSVI 296
Query: 185 KGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD 244
K C EA ++ + G P+I + F + + +E ++F+++ K+M
Sbjct: 297 KPLCKARRFDEARAVFEELLQRGLCPTI----QTYHAFLRFLRTEE--EIFELL--KKMR 348
Query: 245 DLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
+G + TY ++I C+ ++ + EM + GI D + +I+GL G+L
Sbjct: 349 TMGCNPTTDTYIMLIRKFCRWRQLDNVSRIWHEMSENGISPDRSSYIVLIHGLFLNGKLE 408
Query: 301 EAYKVVEEIEKPDI 314
+A+K E+++ D+
Sbjct: 409 DAHKYYLEMKEKDL 422
>gi|242092396|ref|XP_002436688.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
gi|241914911|gb|EER88055.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
Length = 551
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 192/415 (46%), Gaps = 25/415 (6%)
Query: 11 VCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCF 70
VC I+ Q PE R+ S+L + ++ E ++ N + FF++ ++ Q F
Sbjct: 106 VCRIVSTQ---PEPRIASTLDALGVAMSPELVAEVLKNLSNAGMLALAFFRWAER-QEGF 161
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNF 130
++ + F+ +++ +GK + L W ++ M R L++ TFK+ + A R++K+ V
Sbjct: 162 SYTAEGFHNLIEALGKIKQFKLVWSLVETMRCRGLLSKDTFKLIVRRYARARKVKEAVET 221
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLV--VEAKYLILKLSEWIKPNEIAYGWLIKGYC 188
F M+ G + L N ++ TL + K V +A Y +K P+ Y L++G+
Sbjct: 222 FEKMSIFGLKTELSDYNWLIDTLSKSKQVKKAQAIYKEMKRKGKFVPDLKTYTVLMEGWG 281
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
DL+ ++ M D G P + +I F K K DEA+KVF M
Sbjct: 282 HEKDLLMVKTMYQEMIDAGIRPDVVAYGMLISAFCKSGKCDEAIKVFYEMEASGCMP-SP 340
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
Y ++I+ + ++ +A E+ K G + T ++++ + A+K+V+E
Sbjct: 341 HVYCMLINGLGSEERLDEALKYFEQYKKSGFPMEVPTCNAVVGAYCRASKFEHAFKMVDE 400
Query: 309 IEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
+ + P+ Y ++ L++ ++ EA VF+ M GCEP ++TY M++ G G
Sbjct: 401 MRECKIGPNSRTYDVILHYLIKSQKFEEAYNVFQRMGMDGCEPQLNTYTMMV-GMFCSNG 459
Query: 365 R-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
R +G P ++ + + GL + +A Y + ++++G+ P
Sbjct: 460 RVDMALNVWKQMGERGVLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRPP 514
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 45/242 (18%), Positives = 96/242 (39%), Gaps = 11/242 (4%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALMTLAEVRELKKMVNFFHI 133
+ + ++ KS D + EM + + + + + L L + + +F
Sbjct: 306 VAYGMLISAFCKSGKCDEAIKVFYEMEASGCMPSPHVYCMLINGLGSEERLDEALKYFEQ 365
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGD 192
G + N VV C+ A ++ ++ E I PN Y ++
Sbjct: 366 YKKSGFPMEVPTCNAVVGAYCRASKFEHAFKMVDEMRECKIGPNSRTYDVILHYLIKSQK 425
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG----L 248
EA ++ M +G EP ++ M+ F + D A+ V+ K+M + G +
Sbjct: 426 FEEAYNVFQRMGMDGCEPQLNTYTMMVGMFCSNGRVDMALNVW-----KQMGERGVLPCM 480
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
+ +I+ +C ++ +A +EM +GI S++ L+ GR+ A ++ +
Sbjct: 481 HMFSALINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVEGGRISLAQEMASK 540
Query: 309 IE 310
++
Sbjct: 541 LD 542
>gi|226505250|ref|NP_001147833.1| GTP binding protein [Zea mays]
gi|195614010|gb|ACG28835.1| GTP binding protein [Zea mays]
gi|413952711|gb|AFW85360.1| GTP binding protein [Zea mays]
Length = 547
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/445 (23%), Positives = 203/445 (45%), Gaps = 25/445 (5%)
Query: 11 VCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCF 70
VC I+ Q PE ++ S+L + ++ E ++ N + FF++ ++ Q F
Sbjct: 102 VCRIVSTQ---PEPKIASTLDALGVAVSPELVAEVLKNLSNAGMLALAFFRWAER-QEGF 157
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNF 130
++ + F+ +++ +GK + L W ++ M R L++ TFK+ + A R++K+ V
Sbjct: 158 SYTAEGFHNLIEALGKIKQFRLVWSLVETMRCRGLLSKDTFKLIVRRYARARKVKEAVET 217
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAK--YLILKLSEWIKPNEIAYGWLIKGYC 188
F M+ G + L N ++ TL + K V +A+ Y +K P+ Y L++G+
Sbjct: 218 FEKMSIFGLKTELSDYNWLIDTLSKSKQVKKAQAIYKEMKRKGKFVPDLKTYTVLMEGWG 277
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
DL+ ++ M D G P + +I F K K DEA+KVF M
Sbjct: 278 HEKDLLMVKTMYQEMIDAGIRPDVVAYGMLISAFCKSGKCDEAIKVFYEMEASGCMP-SP 336
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
Y ++I+ + ++ +A E K G + T ++++ + + A+K+V+E
Sbjct: 337 HVYCMLINGLGSEERLDEALKYFEHYKKSGFPMEVPTCNAVVGAYCRASKFQHAFKMVDE 396
Query: 309 IEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
+ K P+ Y ++ L++ ++ EA +F+ M GCEP ++TY M++ G G
Sbjct: 397 MRKCKVGPNSRTYDVILHYLIKSQKFEEAYNIFQRMGIDGCEPQLNTYTMMV-GMFCSNG 455
Query: 365 R-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
R KG P ++ + + GL + +A Y + ++++G+ P ++
Sbjct: 456 RVDMALKVWKQMGEKGVLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRPPGQLFS 515
Query: 412 KFLHYYSNEEGVVMFEEVGKKLREV 436
+ + +EV KL +
Sbjct: 516 NLKEALVQGGRISLAQEVALKLDAI 540
>gi|15228825|ref|NP_188906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274241|sp|Q9LUJ4.1|PP248_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22670, mitochondrial; Flags: Precursor
gi|9279685|dbj|BAB01242.1| unnamed protein product [Arabidopsis thaliana]
gi|332643142|gb|AEE76663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 562
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 113/431 (26%), Positives = 197/431 (45%), Gaps = 33/431 (7%)
Query: 10 RVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPC 69
+VC L ++ S E + LS C+ +T LQ+ F W Y FF + +Q
Sbjct: 104 KVCDFLNKKDTSHEDVV-KELSKCDVVVTESLVLQVLRRFSNGWNQAYGFFIWAN-SQTG 161
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRR---RLVNDKTFKIALMTLAEVRELKK 126
+ H+ T+N MVD++GK RN DL WE + EM + +LV T + LA+ + K
Sbjct: 162 YVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNK 221
Query: 127 MVN-FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIK 185
V+ F + G + +N ++ L + + A + LKL + IKP+ + LI
Sbjct: 222 AVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIH 281
Query: 186 GYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD- 244
G+C +A + +LM F P + +E + K+ + +V +M+ R +
Sbjct: 282 GFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYC---KEGDFRRVNEMLEEMRENG 338
Query: 245 -DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
+ + TY IV+ + K ++++A + E+M + G D SS+I+ L GR ++A
Sbjct: 339 CNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAA 398
Query: 304 KVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIK---RGCEPTMHTYIMLL 356
++ E++ + D+ +Y+ +I L R A ++ + M C P + TY LL
Sbjct: 399 EIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLL 458
Query: 357 Q-----------GHLGKRGRKGPDPLVNFDT--IFVGGLVKAGKSLDAAKYVERVMNRGV 403
+ G L K D ++ T + + GL +GK +A + E + +G+
Sbjct: 459 KMCCHKKKMKLLGILLHHMVKN-DVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGM 517
Query: 404 EVPRFDYNKFL 414
VPR K L
Sbjct: 518 -VPRDSTCKML 527
>gi|115455297|ref|NP_001051249.1| Os03g0746400 [Oryza sativa Japonica Group]
gi|113549720|dbj|BAF13163.1| Os03g0746400, partial [Oryza sativa Japonica Group]
Length = 613
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/409 (24%), Positives = 187/409 (45%), Gaps = 20/409 (4%)
Query: 11 VCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCF 70
V IL + SPE+ + ++ C+ +T +I F W + FF + Q +
Sbjct: 164 VSRILSARFASPEA-IMIAMDCCSVRVTGCLVDKILTRFSNDWVAAFGFFMWV-GTQGGY 221
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGR-RRLVNDKTFKIALMTLAEVRELKKMVN 129
H + +++ MVDI+GK + DL W + +M L++ T + LA + ++
Sbjct: 222 CHCADSYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAID 281
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCD 189
FH M+ G + +N ++ TLC+ + V A+ + +L I P+E ++ L+ G+C
Sbjct: 282 AFHKMDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELRGTIPPDENSFNTLVHGWCK 341
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
L EA M GF PS+ ++E + + MR +R +
Sbjct: 342 ARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPP-NVV 400
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
TY I++ + K G+ +A +++ + G+ D +S+IY L GRL +AY VVEE+
Sbjct: 401 TYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEM 460
Query: 310 E----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG- 364
P+++ ++ LI +A A ++ +M ++ C P + TY LL+ ++
Sbjct: 461 RTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQWV 520
Query: 365 -----------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
RK P + T+ V L + GK + ++E ++++G
Sbjct: 521 KILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKG 569
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 111/254 (43%), Gaps = 10/254 (3%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMV 128
F+ + +T+ +V+ ++ + L EM +RR N T+ I + L + ++ +
Sbjct: 360 FSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREAL 419
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGY 187
+ F + + G N ++ L + + +A ++ ++ + I PN + LI
Sbjct: 420 DTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAA 479
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV--FQMMRVKRMD- 244
CD A K+ M ++ P I K K+ + +K+ F + + R D
Sbjct: 480 CDHSQAENALKLLVKMEEQSCNPDI----KTYTPLLKLCCKRQWVKILLFLVCHMFRKDI 535
Query: 245 DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK 304
STY +++ W+C+ GK++Q+ LEEM +G T ++ L R L+ YK
Sbjct: 536 SPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAPKQETFDLVMEKLEKRN-LQSVYK 594
Query: 305 VVEEIEKPDISLYH 318
++ + +L H
Sbjct: 595 KIQVLRTQVTNLKH 608
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 109/260 (41%), Gaps = 20/260 (7%)
Query: 204 TDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLSTYRIVIDWMCKRG 262
T G+ D D M++ K + D + QM+ V + + L T V+ +
Sbjct: 217 TQGGYCHCADSYDLMVDILGKFKQFDLMWGLINQMVEVGGL--MSLMTMTKVMRRLAGAS 274
Query: 263 KISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE---KPDISLYHG 319
+ ++A +M + G+ D ++ ++ L ++ A V +E+ PD + ++
Sbjct: 275 RWTEAIDAFHKMDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELRGTIPPDENSFNT 334
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK-------------RGRK 366
L+ G + R +EA EM + G P++ TY L++ + + R R+
Sbjct: 335 LVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRR 394
Query: 367 GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMF 426
P +V + TI + L KAG++ +A +++ GV YN ++ +
Sbjct: 395 CPPNVVTY-TILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDA 453
Query: 427 EEVGKKLREVGLADLADIFQ 446
V +++R G+A F
Sbjct: 454 YSVVEEMRTTGIAPNVTTFN 473
>gi|108711050|gb|ABF98845.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215693326|dbj|BAG88708.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625789|gb|EEE59921.1| hypothetical protein OsJ_12549 [Oryza sativa Japonica Group]
Length = 554
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 101/409 (24%), Positives = 187/409 (45%), Gaps = 20/409 (4%)
Query: 11 VCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCF 70
V IL + SPE+ + ++ C+ +T +I F W + FF + Q +
Sbjct: 105 VSRILSARFASPEA-IMIAMDCCSVRVTGCLVDKILTRFSNDWVAAFGFFMWV-GTQGGY 162
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGR-RRLVNDKTFKIALMTLAEVRELKKMVN 129
H + +++ MVDI+GK + DL W + +M L++ T + LA + ++
Sbjct: 163 CHCADSYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAID 222
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCD 189
FH M+ G + +N ++ TLC+ + V A+ + +L I P+E ++ L+ G+C
Sbjct: 223 AFHKMDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELRGTIPPDENSFNTLVHGWCK 282
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
L EA M GF PS+ ++E + + MR +R +
Sbjct: 283 ARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPP-NVV 341
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
TY I++ + K G+ +A +++ + G+ D +S+IY L GRL +AY VVEE+
Sbjct: 342 TYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEM 401
Query: 310 E----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG- 364
P+++ ++ LI +A A ++ +M ++ C P + TY LL+ ++
Sbjct: 402 RTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQWV 461
Query: 365 -----------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
RK P + T+ V L + GK + ++E ++++G
Sbjct: 462 KILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKG 510
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 112/257 (43%), Gaps = 10/257 (3%)
Query: 67 QPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELK 125
Q F+ + +T+ +V+ ++ + L EM +RR N T+ I + L + +
Sbjct: 298 QHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTR 357
Query: 126 KMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLI 184
+ ++ F + + G N ++ L + + +A ++ ++ + I PN + LI
Sbjct: 358 EALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLI 417
Query: 185 KGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV--FQMMRVKR 242
CD A K+ M ++ P I K K+ + +K+ F + + R
Sbjct: 418 SAACDHSQAENALKLLVKMEEQSCNPDI----KTYTPLLKLCCKRQWVKILLFLVCHMFR 473
Query: 243 MD-DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
D STY +++ W+C+ GK++Q+ LEEM +G T ++ L R L+
Sbjct: 474 KDISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAPKQETFDLVMEKLEKRN-LQS 532
Query: 302 AYKVVEEIEKPDISLYH 318
YK ++ + +L H
Sbjct: 533 VYKKIQVLRTQVTNLKH 549
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 108/253 (42%), Gaps = 20/253 (7%)
Query: 204 TDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLSTYRIVIDWMCKRG 262
T G+ D D M++ K + D + QM+ V + + L T V+ +
Sbjct: 158 TQGGYCHCADSYDLMVDILGKFKQFDLMWGLINQMVEVGGL--MSLMTMTKVMRRLAGAS 215
Query: 263 KISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE---KPDISLYHG 319
+ ++A +M + G+ D ++ ++ L ++ A V +E+ PD + ++
Sbjct: 216 RWTEAIDAFHKMDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELRGTIPPDENSFNT 275
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK-------------RGRK 366
L+ G + R +EA EM + G P++ TY L++ + + R R+
Sbjct: 276 LVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRR 335
Query: 367 GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMF 426
P +V + TI + L KAG++ +A +++ GV YN ++ +
Sbjct: 336 CPPNVVTY-TILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDA 394
Query: 427 EEVGKKLREVGLA 439
V +++R G+A
Sbjct: 395 YSVVEEMRTTGIA 407
>gi|449444202|ref|XP_004139864.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Cucumis sativus]
gi|449502917|ref|XP_004161779.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Cucumis sativus]
Length = 532
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 104/425 (24%), Positives = 201/425 (47%), Gaps = 29/425 (6%)
Query: 2 PVDPGHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQ 61
P DP V V +LY +++ P + +LS C+ LT +F L++ W P ++FF
Sbjct: 87 PDDPS-AVYVQNVLYFRRHKPVEDIERALSLCDLVLTDDFVLKVLRRHRSDWNPAFIFFN 145
Query: 62 YTQK---AQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRR-LVNDKTFKIALMT 117
+ K + F S+ +N ++ I+GK R + + L EM +R+ LVN++T+ + L
Sbjct: 146 WVLKRGTNEEKFTPGSVIYNEILVILGKFRRFEEVDKVLVEMSKRKELVNEETYSVLLNR 205
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNE 177
A ++++ ++ F+ + G E +L ++ LC+ K V A+ L +
Sbjct: 206 YAAAHKVEEAISIFYRRQEFGLEMNLIAFQSLLMWLCRYKHVEAAETLFHSKKHEFVTDI 265
Query: 178 IAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQM 237
++ G+C +G++ EA + W + + EP I +I + K K A+K+F+
Sbjct: 266 KTSNIILNGWCVLGNVHEAKRFWREIIESKCEPDIYTYGTLINSLTKKGKLGTALKLFRA 325
Query: 238 MRVKRMDDLGLSTYRI----VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
M + GL+T + +ID +C + +I +A + +EM +RG A+ T +++I L
Sbjct: 326 MW-----ERGLTTDVVICNCIIDALCFKKRIPEALEIFKEMNERGCAANVATYNTLIKHL 380
Query: 294 LARGRLREAYKVVEEIEKPDISLYHG---LIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
R+ + +++ E+E+ S + I L +R E +F+ M + GC+ T
Sbjct: 381 CKIRRMEKVNELLNEMEERKGSCWPNSVTFIYLLGSVRGPEEVPVLFQRMERSGCKMTSD 440
Query: 351 TYIMLLQGHL------------GKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERV 398
Y ++L+ ++ + G P TI + GL + G++ D +Y +
Sbjct: 441 IYNLILRLYMDWDIQERVKSTWNEMKEMGLGPDRRSYTIMIHGLYEKGRTKDGLRYFNEM 500
Query: 399 MNRGV 403
+G+
Sbjct: 501 TLKGI 505
>gi|218193742|gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
Length = 1874
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 101/409 (24%), Positives = 187/409 (45%), Gaps = 20/409 (4%)
Query: 11 VCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCF 70
V IL + SPE+ + ++ C+ +T +I F W + FF + Q +
Sbjct: 1425 VSRILSARFASPEA-IMIAMDCCSVRVTGCLVDKILTRFSNDWVAAFGFFMWV-GTQGGY 1482
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGR-RRLVNDKTFKIALMTLAEVRELKKMVN 129
H + +++ MVDI+GK + DL W + +M L++ T + LA + ++
Sbjct: 1483 CHCADSYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAID 1542
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCD 189
FH M+ G + +N ++ TLC+ + V A+ + +L I P+E ++ L+ G+C
Sbjct: 1543 AFHKMDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELRGTIPPDENSFNTLVHGWCK 1602
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
L EA M GF PS+ ++E + + MR +R +
Sbjct: 1603 ARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPP-NVV 1661
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
TY I++ + K G+ +A +++ + G+ D +S+IY L GRL +AY VVEE+
Sbjct: 1662 TYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEM 1721
Query: 310 E----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG- 364
P+++ ++ LI +A A ++ +M ++ C P + TY LL+ ++
Sbjct: 1722 RTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQWV 1781
Query: 365 -----------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
RK P + T+ V L + GK + ++E ++++G
Sbjct: 1782 KILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKG 1830
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 112/257 (43%), Gaps = 10/257 (3%)
Query: 67 QPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELK 125
Q F+ + +T+ +V+ ++ + L EM +RR N T+ I + L + +
Sbjct: 1618 QHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTR 1677
Query: 126 KMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLI 184
+ ++ F + + G N ++ L + + +A ++ ++ + I PN + LI
Sbjct: 1678 EALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLI 1737
Query: 185 KGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV--FQMMRVKR 242
CD A K+ M ++ P I K K+ + +K+ F + + R
Sbjct: 1738 SAACDHSQAENALKLLVKMEEQSCNPDI----KTYTPLLKLCCKRQWVKILLFLVCHMFR 1793
Query: 243 MD-DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
D STY +++ W+C+ GK++Q+ LEEM +G T ++ L R L+
Sbjct: 1794 KDISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAPKQETFDLVMEKLEKRN-LQS 1852
Query: 302 AYKVVEEIEKPDISLYH 318
YK ++ + +L H
Sbjct: 1853 VYKKIQVLRTQVTNLKH 1869
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 109/260 (41%), Gaps = 20/260 (7%)
Query: 204 TDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLSTYRIVIDWMCKRG 262
T G+ D D M++ K + D + QM+ V + + L T V+ +
Sbjct: 1478 TQGGYCHCADSYDLMVDILGKFKQFDLMWGLINQMVEVGGL--MSLMTMTKVMRRLAGAS 1535
Query: 263 KISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE---KPDISLYHG 319
+ ++A +M + G+ D ++ ++ L ++ A V +E+ PD + ++
Sbjct: 1536 RWTEAIDAFHKMDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELRGTIPPDENSFNT 1595
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK-------------RGRK 366
L+ G + R +EA EM + G P++ TY L++ + + R R+
Sbjct: 1596 LVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRR 1655
Query: 367 GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMF 426
P +V + TI + L KAG++ +A +++ GV YN ++ +
Sbjct: 1656 CPPNVVTY-TILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDA 1714
Query: 427 EEVGKKLREVGLADLADIFQ 446
V +++R G+A F
Sbjct: 1715 YSVVEEMRTTGIAPNVTTFN 1734
>gi|21686921|gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1833
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 189/409 (46%), Gaps = 20/409 (4%)
Query: 11 VCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCF 70
V IL + SPE+ + ++ C+ +T +I F W + FF + Q +
Sbjct: 1384 VSRILSARFASPEA-IMIAMDCCSVRVTGCLVDKILTRFSNDWVAAFGFFMWV-GTQGGY 1441
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGR-RRLVNDKTFKIALMTLAEVRELKKMVN 129
H + +++ MVDI+GK + DL W + +M L++ T + LA + ++
Sbjct: 1442 CHCADSYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAID 1501
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCD 189
FH M+ G + +N ++ TLC+ + V A+ + +L I P+E ++ L+ G+C
Sbjct: 1502 AFHKMDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELRGTIPPDENSFNTLVHGWCK 1561
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
L EA M GF PS+ ++E + + KD + + KR +
Sbjct: 1562 ARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYC-MEKDFQTVYALLDEMRKRRCPPNVV 1620
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
TY I++ + K G+ +A +++ + G+ D +S+IY L GRL +AY VVEE+
Sbjct: 1621 TYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEM 1680
Query: 310 E----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG- 364
P+++ ++ LI +A A ++ +M ++ C P + TY LL+ ++
Sbjct: 1681 RTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQWV 1740
Query: 365 -----------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
RK P + T+ V L + GK + ++E ++++G
Sbjct: 1741 KILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKG 1789
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 112/255 (43%), Gaps = 6/255 (2%)
Query: 67 QPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELK 125
Q F+ + +T+ +V+ ++ + L EM +RR N T+ I + L + +
Sbjct: 1577 QHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTR 1636
Query: 126 KMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLI 184
+ ++ F + + G N ++ L + + +A ++ ++ + I PN + LI
Sbjct: 1637 EALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLI 1696
Query: 185 KGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD 244
CD A K+ M ++ P I +++ K + + +F + + R D
Sbjct: 1697 SAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCK--RQWVKILLFLVCHMFRKD 1754
Query: 245 -DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
STY +++ W+C+ GK++Q+ LEEM +G T ++ L R L+ Y
Sbjct: 1755 ISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAPKQETFDLVMEKLEKRN-LQSVY 1813
Query: 304 KVVEEIEKPDISLYH 318
K ++ + +L H
Sbjct: 1814 KKIQVLRTQVTNLKH 1828
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 109/260 (41%), Gaps = 20/260 (7%)
Query: 204 TDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLSTYRIVIDWMCKRG 262
T G+ D D M++ K + D + QM+ V + + L T V+ +
Sbjct: 1437 TQGGYCHCADSYDLMVDILGKFKQFDLMWGLINQMVEVGGL--MSLMTMTKVMRRLAGAS 1494
Query: 263 KISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE---KPDISLYHG 319
+ ++A +M + G+ D ++ ++ L ++ A V +E+ PD + ++
Sbjct: 1495 RWTEAIDAFHKMDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELRGTIPPDENSFNT 1554
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK-------------RGRK 366
L+ G + R +EA EM + G P++ TY L++ + + R R+
Sbjct: 1555 LVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRR 1614
Query: 367 GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMF 426
P +V + TI + L KAG++ +A +++ GV YN ++ +
Sbjct: 1615 CPPNVVTY-TILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDA 1673
Query: 427 EEVGKKLREVGLADLADIFQ 446
V +++R G+A F
Sbjct: 1674 YSVVEEMRTTGIAPNVTTFN 1693
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 119/454 (26%), Positives = 206/454 (45%), Gaps = 43/454 (9%)
Query: 49 FP-LSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVN 107
FP L + P +LFF F N + S N + L R +N
Sbjct: 29 FPFLPYFPSFLFFHRHHITTSTFTKNPSLPKKNGGFASNSSNTISVDDALASFYRMARMN 88
Query: 108 DKT----FKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAK 163
+ F L ++A++++ +V + M+ G +++ LN ++ LC+ V A
Sbjct: 89 PRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLNHVDFAV 148
Query: 164 YLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETF 222
+ K+ + I+P+ I + LI G C+ G + A +++N M G EP + + +I
Sbjct: 149 SVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGL 208
Query: 223 FKINKDDEAMKVFQMMRVKRMDDLG----LSTYRIVIDWMCKRGKISQAYTMLEEMFKRG 278
+ A+ VF K+M+ G + TY +ID +CK ++ A L EM RG
Sbjct: 209 CNSGNTNMAVHVF-----KKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRG 263
Query: 279 IEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREAT 334
I D +T +SI++GL G+L EA ++ + +E KPD+ Y+ +I L + R +A
Sbjct: 264 IPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAA 323
Query: 335 QVFREMIKRGCEPTMHTYIMLLQG--HLG----------KRGRKGPDP-LVNFDTIFVGG 381
EM+ +G P + TY +L G +LG K +KG P +V ++TI +
Sbjct: 324 DFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTI-IDS 382
Query: 382 LVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN----EEGVVMFEE-VGKKL--R 434
L K DA +++ +++RG+ Y+ LH + N +E +F+E VG+ +
Sbjct: 383 LCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPN 442
Query: 435 EVGLADLADIFQRYGKKMATR---ERRRNRAIEP 465
+ + L D + G R E + +EP
Sbjct: 443 TLTFSILVDGLCQEGMVSEARWVFETMTEKGVEP 476
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 175/378 (46%), Gaps = 65/378 (17%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+T+N ++D + K R ++ + L EM + + D T+ L L + +L + + F
Sbjct: 304 VTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKK 363
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDVGD 192
M GC+ + N ++ +LC+ +LV +A ++L + I PN + Y ++ G+C++G
Sbjct: 364 MEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQ 423
Query: 193 LIEASK-----------------------------------IWNLMTDEGFEPSIDVVDK 217
L EA++ ++ MT++G EP+I +
Sbjct: 424 LDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNA 483
Query: 218 MIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKR 277
++ + K +EA KVF++M V + L +Y I+I+ C ++ +A +L +M +
Sbjct: 484 LMNGYCLRCKMNEARKVFEIM-VGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVK 542
Query: 278 GIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREA 333
+ + +T ++I+ GL GRL +A ++ +++ P + Y L+ GL + EA
Sbjct: 543 KLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEA 602
Query: 334 TQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAK 393
++F+ M ++ EP + Y +L++G +F+GG ++ K L
Sbjct: 603 LKLFKSMKEKKLEPDIILYTILIEG------------------MFIGGKLEVAKGL---- 640
Query: 394 YVERVMNRGVEVPRFDYN 411
++ G++ P YN
Sbjct: 641 -FSKLSADGIQPPGRTYN 657
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 164/365 (44%), Gaps = 21/365 (5%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
ITF +++ + I + E EM R D ++ + L V+ F
Sbjct: 164 ITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKK 223
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDVGD 192
M GC+ ++ N ++ +LC+ +LV +A +L + I P+ I Y ++ G C +G
Sbjct: 224 MEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQ 283
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
L EA++++ M G +P + + +I++ +K ++A M V + + TY
Sbjct: 284 LNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEM-VDQGIPPDVVTYT 342
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
++ +C G++++A + ++M ++G + D + ++II L + +A + + E+
Sbjct: 343 TILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDR 402
Query: 311 --KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG---- 364
P+ Y ++ G L + EATQ+F+EM+ R P T+ +L+ G L + G
Sbjct: 403 GIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDG-LCQEGMVSE 461
Query: 365 ---------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
KG +P + + G K +A K E ++ +G YN ++
Sbjct: 462 ARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILIN 521
Query: 416 YYSNE 420
Y N
Sbjct: 522 GYCNS 526
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 140/292 (47%), Gaps = 7/292 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHI 133
+ +N ++D + K R ++ E L EM R + N T+ L + +L + F
Sbjct: 374 VAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKE 433
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M + + +V LCQ +V EA+++ ++E ++PN Y L+ GYC
Sbjct: 434 MVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCK 493
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ EA K++ +M +G P + + +I + + D+A + M VK++ TY
Sbjct: 494 MNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTP-NTVTYN 552
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK- 311
++ +C G++ A + ++M G+ +T S ++ GL G L EA K+ + +++
Sbjct: 553 TIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEK 612
Query: 312 ---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL 360
PDI LY LI+G+ + A +F ++ G +P TY ++++G L
Sbjct: 613 KLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLL 664
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 120/238 (50%), Gaps = 9/238 (3%)
Query: 73 NSITFNRMVDII---GKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVR-ELKKMV 128
N++TF+ +VD + G +ET+ E G N T+ ALM +R ++ +
Sbjct: 442 NTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEP--NIYTYN-ALMNGYCLRCKMNEAR 498
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGY 187
F IM GC L N ++ C + + +AK L+ ++S + + PN + Y ++KG
Sbjct: 499 KVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGL 558
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C VG L++A +++ M G P++ ++ K DEA+K+F+ M+ K+++
Sbjct: 559 CYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEP-D 617
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
+ Y I+I+ M GK+ A + ++ GI+ T + +I GLL G EAY++
Sbjct: 618 IILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYEL 675
>gi|326524964|dbj|BAK04418.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 565
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 101/446 (22%), Positives = 205/446 (45%), Gaps = 25/446 (5%)
Query: 10 RVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPC 69
RVC +L PE R+ ++L + +++ + ++ N + FF++ ++ Q
Sbjct: 119 RVCRVL---STLPEPRVPAALDALGASVSPQLVAEVLKNLSNAGILALAFFRWAERQQG- 174
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
F + + +F+ +++ +GK + L W ++ M R L++ TF++ + A R++K+ V
Sbjct: 175 FVYTADSFHNLIEALGKIKQFRLVWSLVEAMRCRGLLSKDTFRLIVRRYARARKVKEAVE 234
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI--LKLSEWIKPNEIAYGWLIKGY 187
F M G + L N ++ L + K V +A + +K + P+ Y L++G+
Sbjct: 235 TFEKMAGFGLKADLSDYNWLIDVLSKSKQVKKAHAIFKEMKRNGRFVPDLKTYTVLMEGW 294
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
DL+ ++ M D G +P + +I +F K K DEA+KVF+ M
Sbjct: 295 GHEKDLLMLKSVYQEMLDAGLQPDVVAYGMLISSFCKSGKCDEAIKVFREMETNGCMP-S 353
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
Y ++I+ + ++ +A E G + T ++++ + + A+K+V+
Sbjct: 354 PHVYCMLINGLGSEERLDEALKYFELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVD 413
Query: 308 EIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
E+ K P+ Y ++ L++ ++ EA VF+ M K GCEP ++TY M++ G
Sbjct: 414 EMRKSGIGPNSRTYDIILHHLIKSQKIEEAYNVFQGMSKDGCEPQLNTYTMMV-GMFCSN 472
Query: 364 GR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY 410
R KG P ++ + + GL + +A Y + +++RG+ P +
Sbjct: 473 ERVDVALKVWNQMKEKGVLPCMHMFSALINGLCFENRLEEACAYFQEMLDRGIRPPGQLF 532
Query: 411 NKFLHYYSNEEGVVMFEEVGKKLREV 436
+ + + +E+ KL E+
Sbjct: 533 SNLKEALIEGGRISLAQEMALKLDEL 558
>gi|225461528|ref|XP_002282646.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Vitis vinifera]
Length = 546
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 185/419 (44%), Gaps = 24/419 (5%)
Query: 9 VRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKA-- 66
+ V +L + S S + +L C +LT + L + WRP Y+FF + +
Sbjct: 88 LEVQNLLKTYRDSSVSEIEGALHQCRLSLTDDLVLDVLKRHRSDWRPAYVFFNWASRCGI 147
Query: 67 QPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRR-LVNDKTFKIALMTLAEVRELK 125
+ ++ N ++DI+G+ R + EM +R+ LVN++TF + L A + +
Sbjct: 148 ESGYSPGCGVHNEILDILGRMRRFHEMTQLFDEMSKRKGLVNERTFGVLLNRYAAAHKTE 207
Query: 126 KMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIK 185
+ V F+ G E L ++ +LC+ K V A++L P+ + ++
Sbjct: 208 EAVKIFNKRKGLGFELDLIAFQTLLMSLCRYKHVEMAEFLFHSKKNEFPPDIKSMNVILN 267
Query: 186 GYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD 245
G+C +G L EA + WN + +P I + K K A+K+FQ M K +
Sbjct: 268 GWCVLGSLREAKRFWNDIITSKCKPDKFTYGIFINSLTKAGKLSTAVKLFQAMWEKGCNP 327
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
++ +ID +C + +I +A +L EM +R + D T +S+I L R + Y++
Sbjct: 328 -DVAICNCIIDALCFKKRIPEALEVLREMNERDCQPDVATYNSLIKHLCKIQRFEKVYEL 386
Query: 306 VEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ---- 357
++++E+ P+ Y L+K ++ E + M + GC Y ++L+
Sbjct: 387 LDDMEQKGCLPNARTYGYLLKS---TKKPEEVPGILERMERNGCRMNSDCYNLILKLYMD 443
Query: 358 --------GHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG-VEVPR 407
L + R G P TI + GL G+ DA Y +++ G V PR
Sbjct: 444 WGYELKLRSTLDEMERNGMGPDQRTYTIMIHGLYDKGRMDDALSYFKQMTLMGMVPEPR 502
>gi|147793827|emb|CAN62355.1| hypothetical protein VITISV_022418 [Vitis vinifera]
Length = 546
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 184/419 (43%), Gaps = 24/419 (5%)
Query: 9 VRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKA-- 66
+ V +L + S S + +L C +LT + L + WRP Y+FF + +
Sbjct: 88 LEVQNLLKTYRDSSVSEIEGALHQCRLSLTDDLVLDVLKRHRSDWRPAYVFFNWASRCGX 147
Query: 67 QPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRR-LVNDKTFKIALMTLAEVRELK 125
+ ++ N ++DI+G+ R + EM +R+ L N++TF + L A + +
Sbjct: 148 ESGYSPGCGVHNEILDILGRMRRFHEMTQLFDEMSKRKGLXNERTFGVLLNRYAAAHKTE 207
Query: 126 KMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIK 185
+ V F+ G E L ++ +LC+ K V A++L P+ + ++
Sbjct: 208 EAVKIFYKRKGLGFELDLIAFQTLLMSLCRYKHVEMAEFLFHSKKNEFPPDIKSMNVILN 267
Query: 186 GYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD 245
G+C +G L EA + WN + +P I + K K A+K+FQ M K +
Sbjct: 268 GWCVLGSLREAKRFWNDIITSKCKPDKFTYGIFINSLTKAGKLSTAVKLFQAMWEKGCNP 327
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
++ +ID +C + +I +A +L EM +R + D T +S+I L R + Y++
Sbjct: 328 -DVAICNCIIDALCFKKRIPEALEVLREMNERDCQPDVATYNSLIKHLCKIQRFEKVYEL 386
Query: 306 VEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ---- 357
++++E+ P+ Y L+K ++ E + M + GC Y ++L+
Sbjct: 387 LDDMEQKGCLPNARTYGYLLKS---TKKPEEVPGILERMERNGCRMNSDCYNLILKLYMD 443
Query: 358 --------GHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG-VEVPR 407
L + R G P TI + GL G+ DA Y +++ G V PR
Sbjct: 444 WGYELKLRSTLDEMERNGMGPDQRTYTIMIHGLYDKGRMDDALSYFKQMTLMGMVPEPR 502
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 180/402 (44%), Gaps = 53/402 (13%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVN 129
A + T+N ++D + K+ D E L EM R + D TF + L + + ++ +
Sbjct: 258 APDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHS 317
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYC 188
+M + C S N ++ LC+++ V AK L+ + +S P+ + Y L G C
Sbjct: 318 LLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLC 377
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
G + EA ++ M+ +G P++ + +I+ K +K ++A ++ + + V +
Sbjct: 378 KRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESL-VSSGFVPDV 436
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY I++D +CK G++ +A M+E M KRG +T ++++ GL GR+ EA+ + +E
Sbjct: 437 VTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKE 496
Query: 309 IEKPD------------------------------------ISLYHGLIKGLLRLRRARE 332
+ D I +Y+ L+ G + R E
Sbjct: 497 MVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDE 556
Query: 333 ATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFV 379
VF +M RGC P + TY +++ G L K G+ G P V I +
Sbjct: 557 IPNVFEDMACRGCVPNIKTYNIVMDG-LCKHGKVDEAFPFLESMHSAGCVPDVVSYNIII 615
Query: 380 GGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEE 421
GL KA K +A + +++++ G+ YN + + EE
Sbjct: 616 DGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEE 657
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 167/369 (45%), Gaps = 27/369 (7%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N +T+N ++D + K+ + +E L+ + V D T+ I + L + L K +
Sbjct: 400 NLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMV 459
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
M GC S+ +++ LC+ V EA ++ ++ S+ + +AY L+ GYC
Sbjct: 460 EGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKS 519
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
EA K+ + + P IDV + +++ + K + DE VF+ M + + T
Sbjct: 520 SRTKEAQKVVDGIRGT---PYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVP-NIKT 575
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y IV+D +CK GK+ +A+ LE M G D ++ + II GL + +EA +V++++
Sbjct: 576 YNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMI 635
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK 366
+ PD Y+ L+ + R +A + + MIK G +P TY L+ G L + R
Sbjct: 636 QAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISG-LSQTNRL 694
Query: 367 GP---------------DPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
G ++TI + L K G A ++ + GVE YN
Sbjct: 695 GDAYELMHEMLRNGCVVSACTTYNTI-IDRLCKEGCLKQALLLMDHMTGHGVEANTVTYN 753
Query: 412 KFLHYYSNE 420
F+ E
Sbjct: 754 IFIDRLCKE 762
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 172/414 (41%), Gaps = 31/414 (7%)
Query: 70 FAHNSITFNRMVDII---GKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKK 126
F H++ T N + + G S I +E + + G + T+ + + +L ++ ++ K
Sbjct: 121 FKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAP--DSYTYHLVIKSLCQMNQIDK 178
Query: 127 MVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKG 186
G + + + + + C+ + +A + + P+ IAY +I G
Sbjct: 179 AFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPS---PDAIAYNAIIHG 235
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
+C D A + M + P + + +I+ K +K D+A ++ M V R
Sbjct: 236 HCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEM-VDRGVTP 294
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
T+ ++D +CK GK +A+++L M +R T +++I GL + + A +V
Sbjct: 295 DTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLV 354
Query: 307 EEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
+E PD+ Y L GL + R EA ++ +EM +GC P + TY L+ G L K
Sbjct: 355 DEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDG-LCK 413
Query: 363 RGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFD 409
+ G P V TI V GL K G+ A K VE ++ RG
Sbjct: 414 ASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVIT 473
Query: 410 YNKFLHYYSN----EEGVVMFEEVGKKLREVGLADLADIFQRYGKKMATRERRR 459
Y + +E +F+E+ K + Y K T+E ++
Sbjct: 474 YTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQK 527
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 124/247 (50%), Gaps = 6/247 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK--TFKIALMTLAEVRELKKMVNF 130
+++T+N ++ + ++ + +E + EM R V T+ + L + LK+ +
Sbjct: 677 DNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLL 736
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDV 190
M G E + N + LC+ + EA L+ ++ +E++Y +I G C
Sbjct: 737 MDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTL--RDEVSYTTVIIGLCKA 794
Query: 191 GDLIEASKIWNLMTD-EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
L ASK+ M +G + + +I+ F K + DEA+ + +M V+R +
Sbjct: 795 EQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLM-VQRGCSPSVI 853
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
TY +VI +CK K+ +A+ + +EM RGI A +++ + +IYGL +GR +EA +V+EE+
Sbjct: 854 TYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEM 913
Query: 310 EKPDISL 316
D +
Sbjct: 914 ASSDCEI 920
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 138/320 (43%), Gaps = 41/320 (12%)
Query: 77 FNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHIMN 135
+N ++D K +D ++M R V N KT+ I + L + ++ + F M+
Sbjct: 541 YNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMH 600
Query: 136 DCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLI 194
GC + N ++ L + EA+ ++ ++ + I P+ + Y L+ +C
Sbjct: 601 SAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFD 660
Query: 195 EASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIV 254
+A I M G +P + +I + N+ +A ++ M +TY +
Sbjct: 661 DAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTI 720
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE--KP 312
ID +CK G + QA +++ M G+EA+ +T + I L GRL EA ++ E++ +
Sbjct: 721 IDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRD 780
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMI------------------------------- 341
++S Y +I GL + + A+++ REM+
Sbjct: 781 EVS-YTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTL 839
Query: 342 -----KRGCEPTMHTYIMLL 356
+RGC P++ TY M++
Sbjct: 840 LGLMVQRGCSPSVITYNMVI 859
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 92/214 (42%), Gaps = 32/214 (14%)
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCK 260
D GF+ S + ++T + D +F+ RM D G + TY +VI +C+
Sbjct: 118 DRGFKHSTFTRNCFLQTLLENGSSDRIPAMFE-----RMLDAGYAPDSYTYHLVIKSLCQ 172
Query: 261 RGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISLYHGL 320
+I +A+TML++ RG + + + + GRL++A ++ I PD Y+ +
Sbjct: 173 MNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPSPDAIAYNAI 232
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVG 380
I G R A + +EM +R P + TY I +
Sbjct: 233 IHGHCRKNDCDGALEFLKEMNERKVAPDVFTY-----------------------NILID 269
Query: 381 GLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
GL KA K+ A++ + +++RGV +N +
Sbjct: 270 GLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIM 303
>gi|255552099|ref|XP_002517094.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543729|gb|EEF45257.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 549
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 110/418 (26%), Positives = 185/418 (44%), Gaps = 27/418 (6%)
Query: 10 RVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPC 69
RV IL ++ Y + +L+ C N T+ Q+ N F W P F + K Q
Sbjct: 103 RVSEIL-KKHYPCTDSVVQALNDCGVNPTNNLISQLLNRFCNDWVPALGLFTWA-KHQTG 160
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEM----GRRRLVNDKTFKIALMTLAEVRELK 125
+ H ++ MVDI+G+ + WE ++EM G LV T K + LA +
Sbjct: 161 YVHPPDLYDLMVDILGRRKKFSFMWELVKEMENLEGYVSLV---TMKKVMRRLARAGNFQ 217
Query: 126 KMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIK 185
V F + G +E LN ++ L + V A ++ + I + ++ L+
Sbjct: 218 DAVEAFRGIEKLGVRKDIEALNVLMDALVKEGSVEHAYSAFMEFKDSIHVDFQSFNILLH 277
Query: 186 GYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD 245
GYC L +A KI + M +GF+P++ IE + K+ +F M+ K
Sbjct: 278 GYCKARKLDDARKIMDEMDKQGFQPNVVSYTCFIELYCKLKDFRNVEAIFSEMQEKSCKP 337
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
+ TY I + + K ++++A + E M D SS+I+ L GRL++A+ V
Sbjct: 338 -NVITYTIFMHALGKAKQVNKALEVYEMMKSNCCVPDASFYSSLIFVLTQSGRLKDAWDV 396
Query: 306 VEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG 361
E+++K PD+ Y+ +I A ++ R M + C+P + TY LL+
Sbjct: 397 FEDMKKQGVSPDLLTYNTMITSACTHLEEENALKLLRRMEEDSCKPDIQTYAPLLKMCCR 456
Query: 362 KRGRKGPDPLVNF------------DTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPR 407
K+ K L+N + VGGL K+GK A + E ++ +G+ +PR
Sbjct: 457 KKRIKVLKFLLNHMFKNNISIDLGTYVLLVGGLCKSGKLELACSFFEEMVMKGL-IPR 513
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/244 (18%), Positives = 107/244 (43%), Gaps = 8/244 (3%)
Query: 70 FAHNSITFNRMVDIIGKS---RNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKK 126
F N +++ +++ K RN++ + +QE + N T+ I + L + +++ K
Sbjct: 300 FQPNVVSYTCFIELYCKLKDFRNVEAIFSEMQEKSCKP--NVITYTIFMHALGKAKQVNK 357
Query: 127 MVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIK 185
+ + +M C + ++ L Q + +A + + + + P+ + Y +I
Sbjct: 358 ALEVYEMMKSNCCVPDASFYSSLIFVLTQSGRLKDAWDVFEDMKKQGVSPDLLTYNTMIT 417
Query: 186 GYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD 245
C + A K+ M ++ +P I +++ + K + +K K
Sbjct: 418 SACTHLEEENALKLLRRMEEDSCKPDIQTYAPLLKMCCR-KKRIKVLKFLLNHMFKNNIS 476
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
+ L TY +++ +CK GK+ A + EEM +G+ + T ++ L + L EA +
Sbjct: 477 IDLGTYVLLVGGLCKSGKLELACSFFEEMVMKGLIPRDRTYKMLVEE-LEQNNLTEAKEK 535
Query: 306 VEEI 309
++++
Sbjct: 536 IQKL 539
>gi|255558584|ref|XP_002520317.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540536|gb|EEF42103.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 439
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 172/375 (45%), Gaps = 38/375 (10%)
Query: 21 SPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRM 80
SP LH++L ++ E + F + Y FF++ +K Q + H+ ++ M
Sbjct: 4 SPAVTLHTALDQNGIRVSPEIVEDVLRRFENAGMVAYRFFEWAEK-QLHYTHSVRAYHTM 62
Query: 81 VDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCE 140
++ + K R + W+ + M R+R++N +TF I + A ++L++ V F++M
Sbjct: 63 IESLAKIRQYQIMWDLINAMKRKRMLNVETFCIIMRKYARAQKLEEAVYTFNVMEKYDVP 122
Query: 141 YSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIW 200
+L N + LC+ K V +A+ + + P+ Y L++G+ +L +A +I+
Sbjct: 123 PNLAAFNGLFSALCKSKNVRKAQEIFDSSKDRFVPDSKTYTILLEGWGKTPNLPKAREIF 182
Query: 201 NLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV-------------------- 240
M D G P I M++ K + DEA+ + + M +
Sbjct: 183 REMVDVGCSPDIVTYGIMVDILCKAGRVDEALDIVKEMDLTICKPTSFIYSVLIHTYGIE 242
Query: 241 KRMDD-----LGL---------STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTL 286
R++D LG+ + Y +I CK K Y +L EM +G++ ++ TL
Sbjct: 243 NRIEDAVDTFLGMEKNGVKADVAAYNALIGAFCKVNKFKNVYRVLNEMDYKGMQPNSRTL 302
Query: 287 SSIIYGLLARGRLREAYKVVEEIEK---PDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
+ I+ L+ARG EA++V + K PD Y +IK A +V++ M K+
Sbjct: 303 NIILNNLIARGETDEAFRVFRRMIKVCEPDADTYTMMIKMFCERNELEMALKVWKYMKKK 362
Query: 344 GCEPTMHTYIMLLQG 358
P+MHT+ +L+ G
Sbjct: 363 HFVPSMHTFSVLING 377
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 178/387 (45%), Gaps = 23/387 (5%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
FA ++ T ++ + + ++D + L+ MG N T+ + A ++L++ +
Sbjct: 21 FAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDP--NVVTYTALIAAFARAKKLEEAMK 78
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYC 188
M + GC +L N +V LC+ +V A+ ++ K+ E PN + + L+ G+C
Sbjct: 79 LLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFC 138
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
G++ +A K+ +M +G P++ +I+ K K EA +V + M+ +
Sbjct: 139 KRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAF 198
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY +I +CK KI +A ML M G D + SSII+ G+L EA K ++E
Sbjct: 199 -TYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQE 257
Query: 309 IEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG-CEPTMHTYIMLLQG----- 358
+ K PD+ Y+ +I GL +L + EA + +M + G P + TY ++ G
Sbjct: 258 MRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSD 317
Query: 359 -------HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPR-FDY 410
L + + G +P V T + GL K G+ L+ A+Y+ + M R P Y
Sbjct: 318 MLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGR-LEEAEYLLQGMKRAGCAPNVVTY 376
Query: 411 NKFLHYYSNEEGVVMFEEVGKKLREVG 437
+ V E V +++R G
Sbjct: 377 TTLISGLCKARKVDEAERVMEEMRNAG 403
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 139/295 (47%), Gaps = 6/295 (2%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMV 128
FA N +TFN +VD K N+D + L M + + N T+ + L + ++ +
Sbjct: 123 FAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAK 182
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGY 187
M G + ++ LC+ + EA+ ++ +++ P+ + Y +I +
Sbjct: 183 EVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAF 242
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C G L+EA K M + P + + +I+ K+ K EA + M+
Sbjct: 243 CKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPD 302
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
+ TY VI+ +CK + +A +L+ M K G D +T ++II GL GRL EA +++
Sbjct: 303 VVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQ 362
Query: 308 EIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+++ P++ Y LI GL + R+ EA +V EM GC P + TY ++ G
Sbjct: 363 GMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNG 417
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 102/202 (50%), Gaps = 9/202 (4%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLSEW--IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
N V+ LC+ + EA+ ++ ++ E + P+ + Y +I G C L+EA K+ + M
Sbjct: 271 NTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMC 330
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
G P + +I+ K + +EA + Q M+ + + TY +I +CK K+
Sbjct: 331 KAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMK-RAGCAPNVVTYTTLISGLCKARKV 389
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE------KPDISLYH 318
+A ++EEM G + +T ++++ GL GR++EA ++V+ ++ PD + Y
Sbjct: 390 DEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYR 449
Query: 319 GLIKGLLRLRRAREATQVFREM 340
++ L+ +EA Q+ +M
Sbjct: 450 TIVNALMSSDLVQEAEQLLEQM 471
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 122/303 (40%), Gaps = 86/303 (28%)
Query: 188 CDVGDLIEASKIWNLMTDEGF--------------------------------EPSIDVV 215
C+ GDL A ++ M GF +P++
Sbjct: 1 CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTY 60
Query: 216 DKMIETFFKINKDDEAMKVFQMMR------------------------------VKRMDD 245
+I F + K +EAMK+ + MR VK+M +
Sbjct: 61 TALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIE 120
Query: 246 LGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
G + T+ ++D CKRG + A +L M +G+ + +T S++I GL + E
Sbjct: 121 GGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLE 180
Query: 302 AYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
A +V+EE++ PD Y LI GL + + EA Q+ R M GC P + Y ++
Sbjct: 181 AKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIH 240
Query: 358 GHL--GK------------RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
GK + RK PD +V ++T+ + GL K GK +A ++++ G
Sbjct: 241 AFCKSGKLLEAQKTLQEMRKQRKSPD-VVTYNTV-IDGLCKLGKIAEAQVILDQMQESGD 298
Query: 404 EVP 406
+P
Sbjct: 299 VLP 301
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 179/402 (44%), Gaps = 53/402 (13%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVN 129
A + T+N ++D + K+ D E L EM R + D TF + L + + ++ +
Sbjct: 7 APDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHS 66
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYC 188
+M + C S N ++ LC+++ V AK L+ + +S P+ + Y L G C
Sbjct: 67 LLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLC 126
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
G + EA ++ M+ G P++ + +I+ K +K ++A ++ + + V +
Sbjct: 127 KRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETL-VSSGFVPDV 185
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY I++D +CK G++ +A M+E M KRG +T ++++ GL GR+ EA+ + +E
Sbjct: 186 VTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKE 245
Query: 309 IEKPD------------------------------------ISLYHGLIKGLLRLRRARE 332
+ D I +Y+ L+ G + R E
Sbjct: 246 MVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDE 305
Query: 333 ATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFV 379
VF +M RGC P + TY +++ G L K G+ G P V I +
Sbjct: 306 IPNVFEDMACRGCVPNIKTYNIVMDG-LCKHGKVDEAFPFLESMHSAGCVPDVVSYNIII 364
Query: 380 GGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEE 421
GL KA K +A + +++++ G+ YN + + EE
Sbjct: 365 DGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEE 406
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 167/369 (45%), Gaps = 27/369 (7%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N +T+N ++D + K+ + +E L+ + V D T+ I + L + L K +
Sbjct: 149 NLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMV 208
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
M GC S+ +++ LC+ V EA ++ ++ S+ + +AY L+ GYC
Sbjct: 209 EGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKS 268
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
EA K+ + + P IDV + +++ + K + DE VF+ M + + T
Sbjct: 269 SRTKEAQKVVDGIRGT---PYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVP-NIKT 324
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y IV+D +CK GK+ +A+ LE M G D ++ + II GL + +EA +V++++
Sbjct: 325 YNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMI 384
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK 366
+ PD Y+ L+ + R +A + + MIK G +P TY L+ G L + R
Sbjct: 385 QAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISG-LSQTNRL 443
Query: 367 GP---------------DPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
G ++TI + L K G A ++ + GVE YN
Sbjct: 444 GDAYELMHEMLRNGCVVSACTTYNTI-IDRLCKEGCLKQALLLMDHMTGHGVEANTVTYN 502
Query: 412 KFLHYYSNE 420
F+ E
Sbjct: 503 IFIDRLCKE 511
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 138/278 (49%), Gaps = 10/278 (3%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK--TFKIALMTLAEVRELKKMVNF 130
+++T+N ++ + ++ + +E + EM R V T+ + L + LK+ +
Sbjct: 426 DNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLL 485
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDV 190
M G E + N + LC+ + EA L+ ++ +E++Y +I G C
Sbjct: 486 MDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTL--RDEVSYTTVIIGLCKA 543
Query: 191 GDLIEASKIWNLMTD-EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
L ASK+ M +G + + +I+ F K + DEA+ + ++M V+R +
Sbjct: 544 EQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELM-VQRGCSPSVI 602
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
TY +VI +CK K+ +A+ + +EM RGI A +++ + +IYGL +GR +EA +V+EE+
Sbjct: 603 TYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEM 662
Query: 310 EKPDISLYHGLIKGL-LRLR---RAREATQVFREMIKR 343
D + + L L LR R EA ++ R M +
Sbjct: 663 ASSDCEIDDLKCRKLYLALRGQGRGEEAAELLRRMTTK 700
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 120/262 (45%), Gaps = 19/262 (7%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
+ P+ Y LI G C +AS++ + M D G P + +++ K K + A
Sbjct: 6 VAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAH 65
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
+ +M +R TY +I +CK+ + +A T+++E G D +T S + G
Sbjct: 66 SLLAVM-AERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADG 124
Query: 293 LLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
L RGR+ EA+++V+E+ P++ Y+ LI GL + + +A ++ ++ G P
Sbjct: 125 LCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPD 184
Query: 349 MHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYV 395
+ TY +++ G L K GR +G P V T + GL + G+ +A
Sbjct: 185 VVTYTIIVDG-LCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIF 243
Query: 396 ERVMNRGVEVPRFDYNKFLHYY 417
+ ++++ Y ++ Y
Sbjct: 244 KEMVSKDCTADALAYVSLVNGY 265
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 138/320 (43%), Gaps = 41/320 (12%)
Query: 77 FNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHIMN 135
+N ++D K +D ++M R V N KT+ I + L + ++ + F M+
Sbjct: 290 YNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMH 349
Query: 136 DCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLI 194
GC + N ++ L + EA+ ++ ++ + I P+ + Y L+ +C
Sbjct: 350 SAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFD 409
Query: 195 EASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIV 254
+A I M G +P + +I + N+ +A ++ M +TY +
Sbjct: 410 DAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTI 469
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE--KP 312
ID +CK G + QA +++ M G+EA+ +T + I L GRL EA ++ E++ +
Sbjct: 470 IDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRD 529
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMI------------------------------- 341
++S Y +I GL + + A+++ REM+
Sbjct: 530 EVS-YTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTL 588
Query: 342 -----KRGCEPTMHTYIMLL 356
+RGC P++ TY M++
Sbjct: 589 LELMVQRGCSPSVITYNMVI 608
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 153/292 (52%), Gaps = 7/292 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVNFF 131
N + +N ++D + K + ++ ++ EM + + D AL++ + +L + F
Sbjct: 195 NVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLF 254
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAK-YLILKLSEWIKPNEIAYGWLIKGYCDV 190
+ M + + +V C+ V EAK L + + + IKP+ + Y L+ GYC V
Sbjct: 255 NKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLV 314
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
+ +A I+N M G ++ + MI F KI K DEAM +F+ M K + + T
Sbjct: 315 KQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIP-DVVT 373
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y +ID +CK GKIS A +++EM RG+ D +T +SI+ L ++ +A ++ +++
Sbjct: 374 YNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMK 433
Query: 311 ----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+PD+ Y LI GL + R ++A +F +++ +G T++TY +++QG
Sbjct: 434 DEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQG 485
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 149/324 (45%), Gaps = 22/324 (6%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
TF I + +++ + F + G E + L ++K LC + + +A + K+
Sbjct: 93 TFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKV 152
Query: 170 -SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
+ N++ YG LI G C VG A ++ + + +P++ + + +I++ K+
Sbjct: 153 VALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLV 212
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
+EA ++ M K + + TY +I C GK++ A + +M I D T S
Sbjct: 213 NEAFDLYSEMVSKGISP-DVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSI 271
Query: 289 IIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
++ G GR++EA V+ + K PD+ Y L+ G +++ +A +F M + G
Sbjct: 272 LVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGG 331
Query: 345 CEPTMHTYIMLLQGHLG-KRGRKG-------------PDPLVNFDTIFVGGLVKAGKSLD 390
+ +Y +++ G K+ + PD +V ++++ + GL K+GK
Sbjct: 332 VTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPD-VVTYNSL-IDGLCKSGKISY 389
Query: 391 AAKYVERVMNRGVEVPRFDYNKFL 414
A K V+ + +RGV + YN L
Sbjct: 390 ALKLVDEMHDRGVPHDKITYNSIL 413
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 124/275 (45%), Gaps = 7/275 (2%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVNFFHIM 134
TF+ +VD K + L M ++ + D +LM V+++ K + F+ M
Sbjct: 268 TFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTM 327
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDL 193
G +++ N ++ C+ K V EA L ++ + I P+ + Y LI G C G +
Sbjct: 328 AQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKI 387
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
A K+ + M D G + +++ K ++ D+A+ + M+ + + + TY I
Sbjct: 388 SYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQP-DMYTYTI 446
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK-- 311
+ID +CK G++ A + E++ +G T + +I G +A ++ ++E
Sbjct: 447 LIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNG 506
Query: 312 --PDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
P+ Y +I L A ++ REMI RG
Sbjct: 507 CIPNAKTYEIIILSLFEKDENDMAEKLLREMIARG 541
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 109/259 (42%), Gaps = 52/259 (20%)
Query: 210 PSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYT 269
P I K++ + KIN A+ + + M + L T+ I+I+ + G +++
Sbjct: 54 PPIFEFGKILGSLVKINCYQTAISLHREMEFNGIAS-DLVTFNILINCFSQLGHTHFSFS 112
Query: 270 MLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY----KVVE------------------ 307
+ + K+G E + +TL+++I GL +G++ +A KVV
Sbjct: 113 VFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLC 172
Query: 308 -----------------EIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
++ +P++ +Y+ +I + +++ EA ++ EM+ +G P +
Sbjct: 173 KVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVV 232
Query: 351 TYIMLLQGH--LGKRG----------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERV 398
TY L+ G LGK + +P V +I V G K G+ +A + +
Sbjct: 233 TYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMM 292
Query: 399 MNRGVEVPRFDYNKFLHYY 417
M +G++ Y + Y
Sbjct: 293 MKQGIKPDVVTYCSLMDGY 311
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 102/224 (45%), Gaps = 11/224 (4%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAE 120
+ AQ N ++N M++ K + +D +EM + ++ D T+ + L +
Sbjct: 324 FNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCK 383
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIA 179
++ + M+D G + N ++ LC+ V +A L+ K+ E I+P+
Sbjct: 384 SGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYT 443
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
Y LI G C G L +A I+ + +G+ ++ MI+ F + D+A+ +
Sbjct: 444 YTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALAL----- 498
Query: 240 VKRMDDLGL----STYRIVIDWMCKRGKISQAYTMLEEMFKRGI 279
+ +M+D G TY I+I + ++ + A +L EM RG+
Sbjct: 499 LSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGL 542
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 185/394 (46%), Gaps = 26/394 (6%)
Query: 58 LFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALM 116
LF ++ P + +T+N M+D K ++ + +++M V D T+ +
Sbjct: 67 LFADMNRRGCP---PSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMD 123
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKP 175
L + +++ + F+ M GC + N ++ LCQ+ + +A + ++ ++ I P
Sbjct: 124 GLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPP 183
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
+ +YG LI G G L EA K++ M D G PS + +I DEA+++F
Sbjct: 184 DSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELF 243
Query: 236 QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
+ MR K T+ I+ID CKRGK+ +A+ +L+ M G D +T S++I GL +
Sbjct: 244 KSMRSKGCRPSRF-TFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCS 302
Query: 296 RGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
R+ +A ++E++ KP + + LI GL + R +EA +V M+ G P + T
Sbjct: 303 IARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVT 362
Query: 352 YIMLLQGHL----GKRGR--------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVM 399
Y L+ GH +R R +G P V T V GL KA + +A ++
Sbjct: 363 YNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMK 422
Query: 400 NRGVEVPRFDYNKFLHYYSN----EEGVVMFEEV 429
+ G F Y + + + + G+ +F E+
Sbjct: 423 SSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEM 456
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 122/268 (45%), Gaps = 32/268 (11%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
+ P+ +YG LI G G L +A ++ + G PS +I N D+A
Sbjct: 6 VSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAR 65
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
++F M +R TY ++ID CKRG + +A ++++M + G D +T ++++ G
Sbjct: 66 ELFADMN-RRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDG 124
Query: 293 LLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
L R+ EA + E+E+ P+ ++ +I GL + + +A QVF EM + P
Sbjct: 125 LCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPD 184
Query: 349 MHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRF 408
+Y I + GL KAGK +A K +R+++ G+
Sbjct: 185 SWSY-----------------------GILIDGLAKAGKLNEAYKLFQRMLDSGITPSAV 221
Query: 409 DYNKFLH----YYSNEEGVVMFEEVGKK 432
YN +H Y+ +E + +F+ + K
Sbjct: 222 TYNVVIHGMCLAYTLDEALELFKSMRSK 249
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 141/339 (41%), Gaps = 14/339 (4%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIM 134
TFN ++D K +D + L+ M V D T+ + L + + + M
Sbjct: 257 TFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDM 316
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGDL 193
C+ ++ N ++ LC+ + EA+ ++ +S P+ + Y L+ G+C G
Sbjct: 317 VKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQT 376
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
A ++ + M G P++ ++ K N+ EA VF M+ L TY
Sbjct: 377 ERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAP-NLFTYTA 435
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE----- 308
+I C G++ + EM GI D++ ++ L GR A +++ E
Sbjct: 436 LILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESL 495
Query: 309 -IEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKG 367
E +Y + GLL + A R+M++ G P L+ G L K G+ G
Sbjct: 496 RSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAG-LCKSGQGG 554
Query: 368 PDPLVNFDTIFVGGLVKAGKSLD-AAKYVERVMNRGVEV 405
V + I L GK+ AAK+VE ++ +G E+
Sbjct: 555 EARAV-LEEIM--DLAYGGKARGKAAKFVEEMVGKGYEI 590
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 8/204 (3%)
Query: 161 EAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMI 219
+A+ L KL + P+ +AY LI G C +A +++ M G PS + MI
Sbjct: 28 DARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMI 87
Query: 220 ETFFKINKDDEAMKVF-QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRG 278
+ K +EA + +M+ + D + TY V+D +CK ++ +A + EM + G
Sbjct: 88 DASCKRGMLEEACDLIKKMIEDGHVPD--VVTYNTVMDGLCKSSRVEEALLLFNEMERLG 145
Query: 279 IEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREAT 334
+ + ++II GL + ++ +A +V E+E PD Y LI GL + + EA
Sbjct: 146 CTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAY 205
Query: 335 QVFREMIKRGCEPTMHTYIMLLQG 358
++F+ M+ G P+ TY +++ G
Sbjct: 206 KLFQRMLDSGITPSAVTYNVVIHG 229
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/313 (20%), Positives = 120/313 (38%), Gaps = 55/313 (17%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRR----LVNDKTFKIALMTLAEVRELKKMVNF 130
+T++ ++ + +D L++M +R+ +V T L ++E +++++
Sbjct: 291 VTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLD- 349
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCD 189
M G + N +V C+ A+ L+ + + + PN + Y L+ G C
Sbjct: 350 --AMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCK 407
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK-------- 241
L EA ++ M G P++ +I F + D +K+F M
Sbjct: 408 ANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVV 467
Query: 242 ----------------------------RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEE 273
R + G YR +D + + GK+ A + +
Sbjct: 468 YGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRD 527
Query: 274 MFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREA 333
M + G +S++ GL G+ EA V+EEI D++ Y G +G +A
Sbjct: 528 MVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIM--DLA-YGGKARG--------KA 576
Query: 334 TQVFREMIKRGCE 346
+ EM+ +G E
Sbjct: 577 AKFVEEMVGKGYE 589
>gi|225432738|ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial [Vitis vinifera]
Length = 535
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/410 (25%), Positives = 183/410 (44%), Gaps = 20/410 (4%)
Query: 15 LYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNS 74
L + ++S + +L C +++ Q+ F W P + FF++ KAQ + H+
Sbjct: 95 LLKFRHSSADAVVQALGGCGVSVSESLVEQVLKRFSNDWIPAFGFFKWA-KAQTGYRHSM 153
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGR-RRLVNDKTFKIALMTLAEVRELKKMVNFFHI 133
++N MVDI+GK + DL WE ++EM R V+ T + LA K + F
Sbjct: 154 NSYNSMVDILGKLKKFDLMWELVEEMDRLGGYVSLATMTKVMRRLARASRWKDAIEAFRG 213
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDL 193
M G + +N ++ L + V A + ++ + I N + LI G+C +
Sbjct: 214 MERFGVKKDTLAMNTLMDALVKENSVEHANDVFVEFKDSILLNPHTFNVLIHGWCKARKM 273
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
A K M + GF P + ++E + + + V M K + TY I
Sbjct: 274 DNALKSMAEMKEHGFCPDVISYTSIVEAYCREKDFRKVNSVLNEMEEKGCPP-NVVTYTI 332
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK-- 311
V+ + K +IS+A + E+M D SS+IY L GRL++A V E++ K
Sbjct: 333 VMHALGKGKEISKALEVYEKMKGSSCVPDTSFYSSLIYILSKAGRLKDARDVFEDMTKQG 392
Query: 312 --PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPD 369
PD+ Y+ +I + +A ++ +M + C+P ++TY LL+ K
Sbjct: 393 AIPDVLTYNTMISAACMHSQEEDALKLLLKMEESSCKPDLNTYSPLLKMCCRNNRMKVLS 452
Query: 370 PLVNFD------------TIFVGGLVKAGKSLDAAKYVERVMNRGVEVPR 407
L+N ++ V GL K+GK A + E ++++G+ VP+
Sbjct: 453 ALLNHMFKNDISLEVGTYSLLVHGLCKSGKLEHACLFFEEMVSKGL-VPK 501
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 172/400 (43%), Gaps = 58/400 (14%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
FA ++ T ++ + + ++D + L+ MG N T+ + A ++L++ +
Sbjct: 143 FAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDP--NVVTYTALIAAFARAKKLEEAMK 200
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYC 188
M + GC +L N +V LC+ +V A+ ++ K+ E PN + + L+ G+C
Sbjct: 201 LLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFC 260
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
G++ +A K+ +M +G P++ +I+ K K EA +V + M+ + +
Sbjct: 261 KRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAF 320
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY +I +CK KI +A ML M G D + SSII+ G+L EA K ++E
Sbjct: 321 -TYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQE 379
Query: 309 IEK----PDISLYHGLIKGLLRLRRAREATQVFREM------------------------ 340
+ K PD+ Y+ +I GL +L + EA + +M
Sbjct: 380 MRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSD 439
Query: 341 ------------IKRGCEPTMHTYIMLLQGHLGKRGR-------------KGPDPLVNFD 375
K GC P + TY ++ G L K GR G P V
Sbjct: 440 MLVEAQKLLDRMCKAGCNPDVVTYTTIIDG-LCKCGRLEEAEYLLQGMKRAGCAPNVVTY 498
Query: 376 TIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
T + GL KA K +A + +E + N G YN ++
Sbjct: 499 TTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVN 538
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 140/295 (47%), Gaps = 6/295 (2%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMV 128
FA N +TFN +VD K N+D + L M + + N T+ + L + ++ +
Sbjct: 245 FAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAK 304
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGY 187
M G + ++ LC+ + EA+ ++ +++ P+ + Y +I +
Sbjct: 305 EVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAF 364
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C G L+EA K M + P + + +I+ K+ K EA + + M+
Sbjct: 365 CKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPD 424
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
+ TY VI+ +CK + +A +L+ M K G D +T ++II GL GRL EA +++
Sbjct: 425 VVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQ 484
Query: 308 EIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+++ P++ Y LI GL + R+ EA +V EM GC P + TY ++ G
Sbjct: 485 GMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNG 539
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/412 (22%), Positives = 176/412 (42%), Gaps = 62/412 (15%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNI----DLF--------------------- 93
FF++ + P F+H + ++N ++ ++ + + DLF
Sbjct: 62 FFRWAPASIPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISG 121
Query: 94 ----------WETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVNFFHIMNDCGCEYS 142
E L+EM D ++T +A +L ++ M GC+ +
Sbjct: 122 FCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPN 178
Query: 143 LEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWN 201
+ ++ + K + EA L+ ++ E PN + Y L+ C + + A +
Sbjct: 179 VVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVK 238
Query: 202 LMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKR 261
M + GF P++ + +++ F K D+A K+ +M K M + TY +ID +CK
Sbjct: 239 KMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRP-NVVTYSALIDGLCKS 297
Query: 262 GKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLY 317
K +A +LEEM RG+ D T S++I+GL ++ EA +++ + PD+ +Y
Sbjct: 298 QKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVY 357
Query: 318 HGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG--HLGK------------- 362
+I + + EA + +EM K+ P + TY ++ G LGK
Sbjct: 358 SSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQE 417
Query: 363 RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
G PD +V + T+ + GL K+ ++A K ++R+ G Y +
Sbjct: 418 SGDVLPD-VVTYSTV-INGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTII 467
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 139/312 (44%), Gaps = 45/312 (14%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N +T++ ++D + KS+ E L+EM R + D T+ + L + ++++
Sbjct: 283 NVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQML 342
Query: 132 HIMNDCGC-----------------------EYSLEML------------NKVVKTLCQR 156
M GC + +L+ + N V+ LC+
Sbjct: 343 RRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKL 402
Query: 157 KLVVEAKYLILKLSEW--IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDV 214
+ EA+ ++ ++ E + P+ + Y +I G C L+EA K+ + M G P +
Sbjct: 403 GKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVT 462
Query: 215 VDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEM 274
+I+ K + +EA + Q M+ + + TY +I +CK K+ +A ++EEM
Sbjct: 463 YTTIIDGLCKCGRLEEAEYLLQGMK-RAGCAPNVVTYTTLISGLCKARKVDEAERVMEEM 521
Query: 275 FKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE------KPDISLYHGLIKGLLRLR 328
G + +T ++++ GL GR++EA ++V+ ++ PD + Y ++ L+
Sbjct: 522 RNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSD 581
Query: 329 RAREATQVFREM 340
+EA Q+ +M
Sbjct: 582 LVQEAEQLLEQM 593
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 111/286 (38%), Gaps = 49/286 (17%)
Query: 200 WNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMC 259
W + GF + + +++ + K EA +F+ + + + +Y IVI C
Sbjct: 65 WAPASIPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEP-DVCSYNIVISGFC 123
Query: 260 KRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-KPDISLYH 318
G + A +LEEM G D T + II + G L A + + P++ Y
Sbjct: 124 NAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTYT 183
Query: 319 GLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML--------------------LQG 358
LI R ++ EA ++ EM +RGC P + TY +L ++G
Sbjct: 184 ALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEG 243
Query: 359 HLG--------------KRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDA 391
KRG KG P V + + GL K+ K L+A
Sbjct: 244 GFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEA 303
Query: 392 AKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVG 437
+ +E + RGV F Y+ +H + + E++ +++ G
Sbjct: 304 KEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSG 349
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 53/138 (38%), Gaps = 9/138 (6%)
Query: 311 KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT--MHTYIML-------LQGHLG 361
+PD+ Y+ +I G A ++ EM G P HT I+ L G +
Sbjct: 109 EPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMD 168
Query: 362 KRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEE 421
G DP V T + +A K +A K +E + RG YN +
Sbjct: 169 HLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLS 228
Query: 422 GVVMFEEVGKKLREVGLA 439
V ++V KK+ E G A
Sbjct: 229 MVGAAQDVVKKMIEGGFA 246
>gi|224077524|ref|XP_002305285.1| predicted protein [Populus trichocarpa]
gi|222848249|gb|EEE85796.1| predicted protein [Populus trichocarpa]
Length = 523
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 112/476 (23%), Positives = 213/476 (44%), Gaps = 55/476 (11%)
Query: 2 PVDPGHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQI---CNNFPLSWRPVYL 58
P PG + + IL Q+ +P L +SL++ + ++ Q+ C N S +
Sbjct: 42 PPLPGLVNEISRILSDQR-NPHHDLETSLNAFSSEISTNLVEQVLKRCKNLGFS---AHR 97
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRR--LVNDKTFKIALM 116
FF + ++ P F H+ +++ +V+I+G SR + W+ L EM +N + +
Sbjct: 98 FFLWAKRI-PGFEHSEESYHILVNILGTSRQFAILWDFLIEMRESHDFEINQEIIWLVFR 156
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPN 176
+ + + F M + G S++ L+K++ LC+ K V A+ ++ +
Sbjct: 157 SYSRANLPSDAIRAFDRMAEFGLRPSVDDLDKLLYVLCKCKHVKCAQQFFDRVKHKFEAK 216
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
Y L++G+ D+G+ +EA K+++ M G + + ++E K DEA K+F+
Sbjct: 217 AKTYSILVRGWGDIGEAVEARKVFDEMRGRGCALDVLAYNSLLEALCKGGNVDEAYKMFR 276
Query: 237 ---------------------------------MMRVKRMDDL-GLSTYRIVIDWMCKRG 262
+ R+KR D + + TY +I +CK G
Sbjct: 277 EIGSHGVEPDACSYAIFIRAYCEANNIHSVFSVLDRMKRYDLVPNVFTYNCIIKKLCKNG 336
Query: 263 KISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYH 318
K+ AY +L EM +RG+ D + ++I+ + A K++ + K PD Y+
Sbjct: 337 KVEDAYQLLHEMMERGVSPDAWSYNTILAYHCEHSEVNRATKLISIMVKDNCLPDRHSYN 396
Query: 319 GLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIF 378
L+K L+R+ R AT+++ M +RG P++ TY +++ G K+G K + F+T+
Sbjct: 397 MLLKLLVRVGRFDRATEIWESMGERGFYPSVSTYSVMIHGLCKKKG-KLEEACRYFETMI 455
Query: 379 VGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLR 434
G+ A +E + NR + D+ + L +E+ K++R
Sbjct: 456 DEGIPP------YASTIEMLRNRLIGFGLLDHIEILACKMERGTSCSIQELAKEMR 505
>gi|297807523|ref|XP_002871645.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317482|gb|EFH47904.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 524
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 195/420 (46%), Gaps = 29/420 (6%)
Query: 4 DPGHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYT 63
D G +V+ L + S L + L C+ ++E ++I + W + FF +
Sbjct: 45 DVGTIVK----LLKNCGSDRKELRNKLEECDVKPSNELVVEILSQVRNDWETAFTFFVWA 100
Query: 64 QKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGR--RRLVNDKTFKIALMTLAEV 121
K Q + + ++ M+ I+GK R D W + EM + LVN +T I + V
Sbjct: 101 GKQQG-YVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAV 159
Query: 122 RELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYG 181
++ K +N FH E ++ ++ LC+ K V +A++LI + + ++
Sbjct: 160 HDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAEHLIFCNKDTYPFDAKSFN 219
Query: 182 WLIKGYCDV-GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
++ G+C+V G EA ++W M + G + + MI + K ++ +K+F M+
Sbjct: 220 IVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKK 279
Query: 241 KRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEM-FKRGIEADNLTLSSIIYGLLARGRL 299
+ ++ Y VI + K +S+A +++ M ++G+E + +T +S+I L +
Sbjct: 280 ESIEP-DRKVYNAVIHALAKASFVSEARNLMKTMEEEKGMEPNVVTYNSLIKPLCKARKT 338
Query: 300 REAYKVVEE-IEK---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
EA +V +E +EK P I YH ++ LR E ++ +M K GC+PT+ TYIML
Sbjct: 339 EEAKQVFDEMLEKGLFPTIRTYHAFMR---ILRTGEEVFELLAKMRKMGCQPTVDTYIML 395
Query: 356 LQGHLGKRG------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
++ R KG P ++ + + GL GK +A Y + + +G+
Sbjct: 396 IRKLCRWRDFDNVLLLWNEMKEKGVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKEKGM 455
>gi|115436822|ref|NP_001043145.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|56201654|dbj|BAD73118.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113532676|dbj|BAF05059.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|125570544|gb|EAZ12059.1| hypothetical protein OsJ_01942 [Oryza sativa Japonica Group]
Length = 540
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 176/390 (45%), Gaps = 46/390 (11%)
Query: 10 RVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPC 69
RVC ++ Q PE R+ L + ++ + ++ N + FF++ ++ Q
Sbjct: 94 RVCRVVSAQ---PEHRIAPVLDALGVTVSPQLVAEVLKNLSNAGILALAFFRWAERQQG- 149
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
F +++ F+ +++ +GK + L W ++ M R ++ TFKI + A R++K+ V
Sbjct: 150 FRYSAEGFHNLIEALGKIKQFRLVWSLVEAMRCRSCLSKDTFKIIVRRYARARKVKEAVE 209
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAK-------------------------- 163
F M+ G + L N ++ L + K V +A
Sbjct: 210 TFEKMSSFGLKTDLSDYNWLIDILSKSKQVKKAHAIFKEMKRKGRFIPDLKTYTVLMEGW 269
Query: 164 -----YLILK------LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSI 212
L+LK L IKP+ +AYG LI +C G EA K+++ M + G PS
Sbjct: 270 GHEKDLLMLKAVYQEMLDAGIKPDVVAYGMLISAFCKSGKCDEAIKVFHEMEESGCMPSP 329
Query: 213 DVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLE 272
V +I + + DEA+K FQ+ + + + T VI C+ + A+ M++
Sbjct: 330 HVYCMLINGLGSMERLDEALKYFQLSKESGF-PMEVPTCNAVIGAYCRALEFHHAFKMVD 388
Query: 273 EMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLR 328
EM K GI + T I+ L+ ++ EAY + + +E+ P+++ Y ++
Sbjct: 389 EMRKSGIGPNTRTYDIILNHLIKSEKIEEAYNLFQRMERDGCEPELNTYTMMVGMFCSNE 448
Query: 329 RAREATQVFREMIKRGCEPTMHTYIMLLQG 358
R A +V+++M ++G P MH + L+ G
Sbjct: 449 RVDMALKVWKQMKEKGVLPCMHMFSALING 478
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/238 (18%), Positives = 100/238 (42%), Gaps = 3/238 (1%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRR-LVNDKTFKIALMTLAEVRELKKMVNFFHI 133
+ + ++ KS D + EM + + + + + L + L + + +F +
Sbjct: 295 VAYGMLISAFCKSGKCDEAIKVFHEMEESGCMPSPHVYCMLINGLGSMERLDEALKYFQL 354
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGD 192
+ G + N V+ C+ A ++ ++ I PN Y ++
Sbjct: 355 SKESGFPMEVPTCNAVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYDIILNHLIKSEK 414
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ EA ++ M +G EP ++ M+ F + D A+KV++ M+ K + + +
Sbjct: 415 IEEAYNLFQRMERDGCEPELNTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPC-MHMFS 473
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
+I+ +C ++ +A +EM +GI S++ L+ GR+ A +V + +E
Sbjct: 474 ALINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVEGGRITLAQEVTQRLE 531
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 78/186 (41%), Gaps = 4/186 (2%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMT 117
+FQ ++++ F T N ++ ++ ++ + EM + + N +T+ I L
Sbjct: 351 YFQLSKESG--FPMEVPTCNAVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYDIILNH 408
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPN 176
L + ++++ N F M GCE L +V C + V A + ++ E + P
Sbjct: 409 LIKSEKIEEAYNLFQRMERDGCEPELNTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPC 468
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
+ LI G C L EA + M D+G P + + E + + A +V Q
Sbjct: 469 MHMFSALINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVEGGRITLAQEVTQ 528
Query: 237 MMRVKR 242
+ + R
Sbjct: 529 RLEMLR 534
>gi|125526112|gb|EAY74226.1| hypothetical protein OsI_02107 [Oryza sativa Indica Group]
Length = 540
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 176/390 (45%), Gaps = 46/390 (11%)
Query: 10 RVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPC 69
RVC ++ Q PE R+ L + ++ + ++ N + FF++ ++ Q
Sbjct: 94 RVCRVVSAQ---PEHRIAPVLDALGVTVSPQLVAEVLKNLSNAGILALAFFRWAERQQG- 149
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
F +++ F+ +++ +GK + L W ++ M R ++ TFKI + A R++K+ V
Sbjct: 150 FRYSAEGFHNLIEALGKIKQFRLVWSLVEAMRCRSCLSKDTFKIIVRRYARARKVKEAVE 209
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAK-------------------------- 163
F M+ G + L N ++ L + K V +A
Sbjct: 210 TFEKMSSFGLKTDLSDYNWLIDILSKSKQVKKAHAIFKEMKRKGRFIPDLKTYTVLMEGW 269
Query: 164 -----YLILK------LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSI 212
L+LK L IKP+ +AYG LI +C G EA K+++ M + G PS
Sbjct: 270 GHEKDLLMLKAVYQEMLDAGIKPDVVAYGMLISAFCKSGKCDEAIKVFHEMEESGCMPSP 329
Query: 213 DVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLE 272
V +I + + DEA+K FQ+ + + + T VI C+ + A+ M++
Sbjct: 330 HVYCMLINGLGSMERLDEALKYFQLSKESGF-PMEVPTCNAVIGAYCRALEFHHAFKMVD 388
Query: 273 EMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLR 328
EM K GI + T I+ L+ ++ EAY + + +E+ P+++ Y ++
Sbjct: 389 EMRKSGIGPNTRTYDIILNHLIKSEKIEEAYNLFQRMERDGCEPELNTYTMMVGMFCSNE 448
Query: 329 RAREATQVFREMIKRGCEPTMHTYIMLLQG 358
R A +V+++M ++G P MH + L+ G
Sbjct: 449 RVDMALKVWKQMKEKGVLPCMHMFSALING 478
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/238 (18%), Positives = 100/238 (42%), Gaps = 3/238 (1%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRR-LVNDKTFKIALMTLAEVRELKKMVNFFHI 133
+ + ++ KS D + EM + + + + + L + L + + +F +
Sbjct: 295 VAYGMLISAFCKSGKCDEAIKVFHEMEESGCMPSPHVYCMLINGLGSMERLDEALKYFQL 354
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGD 192
+ G + N V+ C+ A ++ ++ I PN Y ++
Sbjct: 355 SKESGFPMEVPTCNAVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYDIILNHLIKSEK 414
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ EA ++ M +G EP ++ M+ F + D A+KV++ M+ K + + +
Sbjct: 415 IEEAYNLFQRMERDGCEPELNTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPC-MHMFS 473
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
+I+ +C ++ +A +EM +GI S++ L+ GR+ A +V + +E
Sbjct: 474 ALINGLCFDNRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVEGGRITLAQEVTQRLE 531
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 78/186 (41%), Gaps = 4/186 (2%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMT 117
+FQ ++++ F T N ++ ++ ++ + EM + + N +T+ I L
Sbjct: 351 YFQLSKESG--FPMEVPTCNAVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYDIILNH 408
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPN 176
L + ++++ N F M GCE L +V C + V A + ++ E + P
Sbjct: 409 LIKSEKIEEAYNLFQRMERDGCEPELNTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPC 468
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
+ LI G C L EA + M D+G P + + E + + A +V Q
Sbjct: 469 MHMFSALINGLCFDNRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVEGGRITLAQEVTQ 528
Query: 237 MMRVKR 242
+ + R
Sbjct: 529 RLEMLR 534
>gi|449463822|ref|XP_004149630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 641
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 158/347 (45%), Gaps = 43/347 (12%)
Query: 57 YLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRR--LVNDKTFKIA 114
Y FF + K QP + H+ + M+ +GK R W ++EM + ++ + F +
Sbjct: 125 YRFFVWASK-QPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFIVL 183
Query: 115 LMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIK 174
+ A VR +KK V M GCE + ++ LC+ V EA L +
Sbjct: 184 MRRFASVRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVRFN 243
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDK----------------- 217
PN + L+ G+C G ++EA + + + GFEP I V +
Sbjct: 244 PNLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDL 303
Query: 218 ------------------MIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMC 259
+I++F K K DEAM++F M+ + + TY +I C
Sbjct: 304 LAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGC-EADVVTYTTLISGFC 362
Query: 260 KRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDIS 315
K G +AY +L++M ++G + L+ I+ + L E +++EE+ K PD++
Sbjct: 363 KWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLN 422
Query: 316 LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
+Y+ +I+ + +L +EA +++ EM G P + TYI+++ G L +
Sbjct: 423 IYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQ 469
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 109/248 (43%), Gaps = 10/248 (4%)
Query: 119 AEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNE 177
A+ +++ + M C + ++++ C+ + + EA + ++ + +
Sbjct: 292 AQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADV 351
Query: 178 IAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQM 237
+ Y LI G+C G+ +A +I + M +G +PS ++ K + +E M++ +
Sbjct: 352 VTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEE 411
Query: 238 MR-VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR 296
MR + + DL + Y +I +CK G + +A + EM G+ T +++G L++
Sbjct: 412 MRKIGCVPDLNI--YNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQ 469
Query: 297 GRLREAYKVVEE------IEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
G L EA +E + P L LLR + A ++ M +GCE +
Sbjct: 470 GCLVEACDYFKEMVERGLLSAPQYGTLKELTNALLRAEKLEMAKNMWSCMTTKGCELNVS 529
Query: 351 TYIMLLQG 358
+ + +
Sbjct: 530 AWTIWIHA 537
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/317 (19%), Positives = 123/317 (38%), Gaps = 47/317 (14%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMV 128
F + + +N ++ ++ + ++ L EM + N +F I + + + ++ + +
Sbjct: 277 FEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAM 336
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-----------------KYLILKLSE 171
F M GCE + ++ C+ +A YL + ++
Sbjct: 337 RIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAH 396
Query: 172 WIK-------------------PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSI 212
K P+ Y +I+ C +GDL EA ++W M G P +
Sbjct: 397 EKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGL 456
Query: 213 DVVDKMIETFFKINKDDEAMKVFQMMRVKR--MDDLGLSTYRIVIDWMCKRGKISQAYTM 270
D M+ F EA F+ M V+R + T + + + + + K+ A M
Sbjct: 457 DTYILMVHGFLSQGCLVEACDYFKEM-VERGLLSAPQYGTLKELTNALLRAEKLEMAKNM 515
Query: 271 LEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDI----SLYHGLIKGLLR 326
M +G E + + I+ L + G ++EA ++ D+ + L++GL +
Sbjct: 516 WSCMTTKGCELNVSAWTIWIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKK 575
Query: 327 L---RRAREATQVFREM 340
L + A E T+ R+M
Sbjct: 576 LFHRQLAVEITEKVRKM 592
>gi|356546852|ref|XP_003541836.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Glycine max]
Length = 481
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 190/408 (46%), Gaps = 31/408 (7%)
Query: 22 PESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMV 81
P +L+ +L C F+L H+ L + WRP ++FF + K + +S N +V
Sbjct: 50 PTEQLYRALDQCGFDLNHDLVLDVLRRHRSDWRPAHVFFNWASKTTTGYQPSSDVCNEIV 109
Query: 82 DIIGKSRNIDLFWETLQEMGRR-RLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCE 140
DI+GK + + L EM +R L+++ F + ++ + + F+ + G E
Sbjct: 110 DILGKMQRFQELHQVLDEMSKREELLDEAVFATLVRRFVGAHKVDEAIQLFYRRKEFGLE 169
Query: 141 YSLEMLNKVVKTLCQRKLVVEAKYLIL-KLSEWIKPNEIAYGWLIKGYCDVGDLIEASKI 199
+ E ++ LC+ K V +A+ L + + ++ + + ++ G+C +G+ EA ++
Sbjct: 170 LNSEAFRTLLMWLCRYKHVEDAEALFHNSVKKGLRADIKMWNVILNGWCVLGNSHEAKRV 229
Query: 200 WNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI---VID 256
W + +P I I+ K K A+K+F+ M D G I +ID
Sbjct: 230 WRDIVASPCKPDIFTYATFIKALTKKGKLGTALKLFRGM----WDKGGKPDVVICNCIID 285
Query: 257 WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----- 311
+C + +I +A + +M +RG E + T +S+I + R+++ Y++V+E+E+
Sbjct: 286 ALCFKKRIPEALEIFCDMSERGCEPNVATYNSLIKYMCKIQRMKKVYELVDEMERKKGSC 345
Query: 312 -PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL------GKRG 364
P+ Y L+K L+ E +V M + GC Y M+L+ ++ G R
Sbjct: 346 LPNAVTYCYLLKS---LKEPGEVCRVLERMERNGCGMNDDVYNMVLRLYMKWDDGDGVRK 402
Query: 365 ------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
R G P TI + + G+ DA +Y+E ++++G+ VP
Sbjct: 403 TWEEMERNGWGPDRRSYTIMIHENFEKGRVKDAVRYLEEMISKGM-VP 449
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 84/186 (45%), Gaps = 10/186 (5%)
Query: 122 RELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE---WIKPNEI 178
+ + + + F M++ GCE ++ N ++K +C+ + + + L+ ++ PN +
Sbjct: 291 KRIPEALEIFCDMSERGCEPNVATYNSLIKYMCKIQRMKKVYELVDEMERKKGSCLPNAV 350
Query: 179 AYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
Y +L+K + G E ++ M G + DV + ++ + K + D K ++ M
Sbjct: 351 TYCYLLKSLKEPG---EVCRVLERMERNGCGMNDDVYNMVLRLYMKWDDGDGVRKTWEEM 407
Query: 239 RVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT---LSSIIYGLLA 295
+Y I+I ++G++ A LEEM +G+ + T +SS+ L
Sbjct: 408 ERNGWGP-DRRSYTIMIHENFEKGRVKDAVRYLEEMISKGMVPERRTEKLVSSMNIRLKG 466
Query: 296 RGRLRE 301
R +E
Sbjct: 467 RSEKQE 472
>gi|449494638|ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 664
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 158/347 (45%), Gaps = 43/347 (12%)
Query: 57 YLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRR--LVNDKTFKIA 114
Y FF + K QP + H+ + M+ +GK R W ++EM + ++ + F +
Sbjct: 148 YRFFVWASK-QPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFIVL 206
Query: 115 LMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIK 174
+ A VR +KK V M GCE + ++ LC+ V EA L +
Sbjct: 207 MRRFASVRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVRFN 266
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDK----------------- 217
PN + L+ G+C G ++EA + + + GFEP I V +
Sbjct: 267 PNLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDL 326
Query: 218 ------------------MIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMC 259
+I++F K K DEAM++F M+ + + TY +I C
Sbjct: 327 LAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGC-EADVVTYTTLISGFC 385
Query: 260 KRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDIS 315
K G +AY +L++M ++G + L+ I+ + L E +++EE+ K PD++
Sbjct: 386 KWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLN 445
Query: 316 LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
+Y+ +I+ + +L +EA +++ EM G P + TYI+++ G L +
Sbjct: 446 IYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQ 492
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 109/248 (43%), Gaps = 10/248 (4%)
Query: 119 AEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNE 177
A+ +++ + M C + ++++ C+ + + EA + ++ + +
Sbjct: 315 AQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADV 374
Query: 178 IAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQM 237
+ Y LI G+C G+ +A +I + M +G +PS ++ K + +E M++ +
Sbjct: 375 VTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEE 434
Query: 238 MR-VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR 296
MR + + DL + Y +I +CK G + +A + EM G+ T +++G L++
Sbjct: 435 MRKIGCVPDLNI--YNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQ 492
Query: 297 GRLREAYKVVEE------IEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
G L EA +E + P L LLR + A ++ M +GCE +
Sbjct: 493 GCLVEACDYFKEMVERGLLSAPQYGTLKELTNALLRAEKLEMAKNMWSCMTTKGCELNVS 552
Query: 351 TYIMLLQG 358
+ + +
Sbjct: 553 AWTIWIHA 560
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/317 (19%), Positives = 123/317 (38%), Gaps = 47/317 (14%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMV 128
F + + +N ++ ++ + ++ L EM + N +F I + + + ++ + +
Sbjct: 300 FEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAM 359
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-----------------KYLILKLSE 171
F M GCE + ++ C+ +A YL + ++
Sbjct: 360 RIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAH 419
Query: 172 WIK-------------------PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSI 212
K P+ Y +I+ C +GDL EA ++W M G P +
Sbjct: 420 EKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGL 479
Query: 213 DVVDKMIETFFKINKDDEAMKVFQMMRVKR--MDDLGLSTYRIVIDWMCKRGKISQAYTM 270
D M+ F EA F+ M V+R + T + + + + + K+ A M
Sbjct: 480 DTYILMVHGFLSQGCLVEACDYFKEM-VERGLLSAPQYGTLKELTNALLRAEKLEMAKNM 538
Query: 271 LEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDI----SLYHGLIKGLLR 326
M +G E + + I+ L + G ++EA ++ D+ + L++GL +
Sbjct: 539 WSCMTTKGCELNVSAWTIWIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKK 598
Query: 327 L---RRAREATQVFREM 340
L + A E T+ R+M
Sbjct: 599 LFHRQLAVEITEKVRKM 615
>gi|225443015|ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Vitis vinifera]
Length = 624
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 170/366 (46%), Gaps = 44/366 (12%)
Query: 40 EFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQE 99
E L+ C N S + FF + ++ P F H+ +++ +VDI+G S+ L W+ L +
Sbjct: 84 EQVLKRCKNLGFS---AHRFFLWAKRL-PGFEHSKESYHILVDILGSSKQFPLIWDFLSD 139
Query: 100 MGRRRL--VNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRK 157
M R + + F + + FH M D G + + +++++ LC+RK
Sbjct: 140 MRETRCCEICPEIFWLIFRAYCRANLPGDAIRAFHQMGDFGVKAGVGDVDQLLYVLCKRK 199
Query: 158 LVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDK 217
V +A+ K++ + PN Y L++G+ DVGD EA K++ M + G + +
Sbjct: 200 HVKQAQEFFDKVNVEVMPNAKTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNS 259
Query: 218 MIETFFKINKDDEAMKVFQMM---------------------------------RVKRMD 244
++E K DEA K+F+ M R++R +
Sbjct: 260 LLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYN 319
Query: 245 DL-GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
+ + TY ++ +CK K+ +AY +L+EM +RG+ D + ++I + +A
Sbjct: 320 LVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQAFHCDHCEVNKAL 379
Query: 304 KVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
+++ +EK PD Y+ ++K LLR+ R T V+ M +RG P TY +++ G
Sbjct: 380 RLISRMEKENCMPDRHTYNMVLKMLLRVGRFDRVTDVWGGMEERGFYPAASTYAVMVHGF 439
Query: 360 LGKRGR 365
K+G+
Sbjct: 440 CKKKGK 445
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 121/301 (40%), Gaps = 48/301 (15%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVN 129
A + + +N +++ + K N+D ++ +EMG L D ++ I + EV ++
Sbjct: 251 AVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQ 310
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYC 188
M ++ N +VK LC+ + V EA L+ ++ E + P+ +Y + +C
Sbjct: 311 VLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQAFHC 370
Query: 189 D-----------------------------------VGDLIEASKIWNLMTDEGFEPSID 213
D VG + +W M + GF P+
Sbjct: 371 DHCEVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRFDRVTDVWGGMEERGFYPAAS 430
Query: 214 VVDKMIETFFKI-NKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRG---KISQAYT 269
M+ F K K +EA K F+MM +DD G+ Y ++ + R S+
Sbjct: 431 TYAVMVHGFCKKKGKLEEACKYFEMM----IDD-GIPPYSCTVELLRNRVIGLGFSEQID 485
Query: 270 MLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISLYHGLIKG--LLRL 327
+L +R LSS++ G A GRLR + + E+ + Y L +G L R+
Sbjct: 486 VLAGKMERSTSCVIQELSSVMRGEKASGRLRSEEQNLPSEERGEGYEYTWLTEGSSLSRM 545
Query: 328 R 328
R
Sbjct: 546 R 546
>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
Length = 465
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 164/366 (44%), Gaps = 27/366 (7%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+T++ ++ K+ ++ E L+E+ R L D + + +L + L + +
Sbjct: 83 VTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEE 142
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGD 192
M GC +L N ++ C+ K + A L+ K++ +K + + Y L+ G C G
Sbjct: 143 MIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGR 202
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
L EA ++ M G P + + K K +A +V + MR D + TY
Sbjct: 203 LQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDP-NVVTYN 261
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKR-GIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK 311
++D +CK GKI A M+E+M G + + S+++ GL GR +EA V+E + +
Sbjct: 262 TILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMAR 321
Query: 312 ----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKG 367
PD+ Y L+ GL + + EA + REM GC+P TY L+ G L GR
Sbjct: 322 AGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHG-LCSCGRLA 380
Query: 368 P------------------DPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFD 409
P V+ +GGL KAG+ DA K+ +R+ ++G +
Sbjct: 381 EAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVS 440
Query: 410 YNKFLH 415
Y+ +
Sbjct: 441 YSTIVE 446
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 145/306 (47%), Gaps = 26/306 (8%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
TF + + L+ + M G + + N ++ LC+ + EA+ L+ ++
Sbjct: 154 TFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERM 213
Query: 170 -SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
+ P+ +AY + G C G +++A ++ M D +P++ + +++ K K
Sbjct: 214 KASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKI 273
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
D A+++ + M L + Y V+D +CK G+ +A +++E M + G D +T SS
Sbjct: 274 DTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSS 333
Query: 289 IIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREM---- 340
++ GL G++ EA + V E+ KP+ Y L+ GL R EA ++ EM
Sbjct: 334 LVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGG 393
Query: 341 -IKRGCEPTMHTYIMLLQGHLGKRGR-------------KGPDP-LVNFDTIFVGGLVKA 385
C P++ TY L+ G L K GR +G DP V++ TI V GL ++
Sbjct: 394 GGGHHCPPSVSTYNALI-GGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTI-VEGLARS 451
Query: 386 GKSLDA 391
G++L A
Sbjct: 452 GRALQA 457
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 135/307 (43%), Gaps = 27/307 (8%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK- 233
PN + + L+ G+ G + ++ M +P++ + ++E K+ + EA +
Sbjct: 8 PNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEEL 67
Query: 234 VFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
V M+ + TY ++ CK GK+ ++ +L+E+ RG+ D L + ++ L
Sbjct: 68 VRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASL 127
Query: 294 LARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
RL EA +++EE+ + P + ++ LI G R + A + ++M G + +
Sbjct: 128 CKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADV 187
Query: 350 HTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVE 396
TY L+ G L K GR G P V + FV GL K+GK LDA + +E
Sbjct: 188 VTYNTLMDG-LCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLE 246
Query: 397 RVMNRGVEVPRFDYNKFLHYYSN----EEGVVMFEEV----GKKLREVGLADLADIFQRY 448
++ + + YN L + + M E++ G L VG + + D +
Sbjct: 247 QMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKL 306
Query: 449 GKKMATR 455
G+ R
Sbjct: 307 GRTQEAR 313
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 129/298 (43%), Gaps = 57/298 (19%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVV--DKMIETFFKINKDDE 230
I+PN ++Y L++G C + EA ++ M G + D+V ++ + K K +E
Sbjct: 41 IQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEE 100
Query: 231 AMKVFQ--MMRVKRMDDL--------------------------------GLSTYRIVID 256
+ ++ + + R R D L L T+ +I
Sbjct: 101 SRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLIS 160
Query: 257 WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KP 312
C+ + A ++L++M G++AD +T ++++ GL GRL+EA +++E ++ P
Sbjct: 161 GCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAP 220
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR------- 365
D+ Y + GL + + +A QV +M +P + TY +L G L K G+
Sbjct: 221 DVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDG-LCKSGKIDTALEM 279
Query: 366 ----KGPDP----LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
D +V + T+ V GL K G++ +A +E + G Y+ ++
Sbjct: 280 MEQMASSDGCGLNVVGYSTV-VDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVN 336
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 74/145 (51%), Gaps = 25/145 (17%)
Query: 274 MFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRR 329
M + G +++T ++++ G +GR + +++E + +P++ Y+GL++GL +L R
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60
Query: 330 AREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSL 389
EA ++ R+MI RG GR PD +V + T+ G KAGK
Sbjct: 61 WHEAEELVRDMISRG-------------------GRSTPD-MVTYSTLL-SGYCKAGKVE 99
Query: 390 DAAKYVERVMNRGVEVPRFDYNKFL 414
++ + ++ V++RG+ Y K +
Sbjct: 100 ESRELLKEVISRGLRPDALMYTKVV 124
>gi|47848296|dbj|BAD22160.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 454
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 150/323 (46%), Gaps = 9/323 (2%)
Query: 49 FPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND 108
F W+ FFQ+ Q + H + NRMVD++GK R ID WE L +M R LV
Sbjct: 46 FGDDWKSALGFFQWAQSRDD-YRHTAYACNRMVDLLGKMRQIDQMWELLSDMHGRGLVTV 104
Query: 109 KTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK 168
+T ++ LA R K +V F + D G E + E +N ++ LC+ + + A+ +
Sbjct: 105 ETVAKSIRRLAGARRWKDVVLLFDKLEDMGLERNTETMNVLLDVLCKERKIEVAREVFAV 164
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
LS I P+ + + G+C + + EA M GF PS+ ++E + K
Sbjct: 165 LSPHIPPDAYTFNIFVHGWCSIRRIDEAMWTIEEMKRRGFPPSVITYTTVLEAYCKQRNF 224
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
+V M + + TY +++ + K + +A ++ M G + D L +S
Sbjct: 225 RRVYEVLDSMGSQGCHP-NVITYTMIMTSLAKCERFEEALSVSHRMKSSGCKPDTLFYNS 283
Query: 289 IIYGLLARGRLREAYKVVEEIEKP------DISLYHGLIKGLLRLRRAREATQVFREMIK 342
+I L G L EA +V +E P +++ Y+ +I R +A V +EM
Sbjct: 284 LINLLGKSGHLFEASQVF-RVEMPMNGVSHNLATYNTMISIFCYYGRDDDALNVLKEMEA 342
Query: 343 RGCEPTMHTYIMLLQGHLGKRGR 365
+ C+P + +Y LL+ L +RG+
Sbjct: 343 QSCKPDIQSYRPLLRLFLSRRGQ 365
>gi|297599556|ref|NP_001047351.2| Os02g0601600 [Oryza sativa Japonica Group]
gi|255671066|dbj|BAF09265.2| Os02g0601600 [Oryza sativa Japonica Group]
Length = 466
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 150/323 (46%), Gaps = 9/323 (2%)
Query: 49 FPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND 108
F W+ FFQ+ Q + H + NRMVD++GK R ID WE L +M R LV
Sbjct: 58 FGDDWKSALGFFQWAQSRDD-YRHTAYACNRMVDLLGKMRQIDQMWELLSDMHGRGLVTV 116
Query: 109 KTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK 168
+T ++ LA R K +V F + D G E + E +N ++ LC+ + + A+ +
Sbjct: 117 ETVAKSIRRLAGARRWKDVVLLFDKLEDMGLERNTETMNVLLDVLCKERKIEVAREVFAV 176
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
LS I P+ + + G+C + + EA M GF PS+ ++E + K
Sbjct: 177 LSPHIPPDAYTFNIFVHGWCSIRRIDEAMWTIEEMKRRGFPPSVITYTTVLEAYCKQRNF 236
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
+V M + + TY +++ + K + +A ++ M G + D L +S
Sbjct: 237 RRVYEVLDSMGSQGCHP-NVITYTMIMTSLAKCERFEEALSVSHRMKSSGCKPDTLFYNS 295
Query: 289 IIYGLLARGRLREAYKVVEEIEKP------DISLYHGLIKGLLRLRRAREATQVFREMIK 342
+I L G L EA +V +E P +++ Y+ +I R +A V +EM
Sbjct: 296 LINLLGKSGHLFEASQVF-RVEMPMNGVSHNLATYNTMISIFCYYGRDDDALNVLKEMEA 354
Query: 343 RGCEPTMHTYIMLLQGHLGKRGR 365
+ C+P + +Y LL+ L +RG+
Sbjct: 355 QSCKPDIQSYRPLLRLFLSRRGQ 377
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 155/296 (52%), Gaps = 7/296 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
N + ++ ++D + K ++++ ++ EM + + N T+ + V +LK ++ F
Sbjct: 196 NVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLF 255
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDV 190
+ M + + N +V C+ + E K + + + + IKPN + Y L+ GYC V
Sbjct: 256 NKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLV 315
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
++ +A I M+ G P I + +I+ F KI K DEAM +F+ M K + + T
Sbjct: 316 KEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIP-DVVT 374
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y +ID +CK GKIS A +++EM RG+ D +T SSI+ L ++ +A ++ +++
Sbjct: 375 YNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLK 434
Query: 311 ----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
+P++ Y LI GL + R +A +F +++ +G T++TY +++ G K
Sbjct: 435 DQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNK 490
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 131/301 (43%), Gaps = 52/301 (17%)
Query: 171 EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDE 230
++PN + Y +I G C + +A +++ M +G P++ +I FF + + +
Sbjct: 191 NLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKD 250
Query: 231 AMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT----- 285
A+ +F M ++ + + T+ I++D CK GK+ + T+ M K+GI+ + +T
Sbjct: 251 AIDLFNKMILENIKP-DVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLM 309
Query: 286 -----------LSSIIYGLLARG-------------------RLREAYKVVEEIEK---- 311
SI+Y + RG ++ EA + +E+
Sbjct: 310 DGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHII 369
Query: 312 PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL----QGH-------- 359
PD+ Y+ LI GL +L + A ++ EM RG P + TY +L + H
Sbjct: 370 PDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIAL 429
Query: 360 LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN 419
L K +G P + TI + GL K G+ DA E ++ +G + Y +H + N
Sbjct: 430 LTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCN 489
Query: 420 E 420
+
Sbjct: 490 K 490
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 113/229 (49%), Gaps = 7/229 (3%)
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIA 179
V+E+ K + + M+ G ++ N ++ C+ K V EA L ++ + I P+ +
Sbjct: 315 VKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVT 374
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
Y LI G C +G + A K+ + M D G P I +++ K ++ D+A+ + ++
Sbjct: 375 YNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLK 434
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
+ + + TY I+ID +CK G++ A+ + E++ +G T + +I+G +G
Sbjct: 435 DQGIRP-NMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLF 493
Query: 300 REAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
EA ++ +++ PD Y +I+ L + + + REMI RG
Sbjct: 494 DEALALLSKMKDNSCIPDAVTYEIIIRSLFD-KDENDKAEKLREMITRG 541
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/289 (19%), Positives = 118/289 (40%), Gaps = 37/289 (12%)
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
K N I Y + + + D+++A +++ + + P +K++ + K +
Sbjct: 38 KINFIPYSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLS 97
Query: 234 VFQMMRVKRMDDL---------------GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRG 278
+ Q M + ++ + T+ +I +C +G+I QA + + G
Sbjct: 98 LSQQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMG 157
Query: 279 IEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREAT 334
+ D + ++I+GL G R A ++ ++ +P++ +Y +I G+ + + +A
Sbjct: 158 FQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAF 217
Query: 335 QVFREMIKRGCEPTMHTYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGL 382
++ EM+ +G P + TY L+ G K + P V I V G
Sbjct: 218 DLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGF 277
Query: 383 VKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGK 431
K GK + +M +G++ + Y S +G + +EV K
Sbjct: 278 CKDGKMKEGKTVFAMMMKQGIK------PNVVTYCSLMDGYCLVKEVNK 320
>gi|125540181|gb|EAY86576.1| hypothetical protein OsI_07956 [Oryza sativa Indica Group]
gi|125582780|gb|EAZ23711.1| hypothetical protein OsJ_07414 [Oryza sativa Japonica Group]
gi|215768726|dbj|BAH00955.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 500
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 153/325 (47%), Gaps = 13/325 (4%)
Query: 49 FPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND 108
F W+ FFQ+ Q + H + NRMVD++GK R ID WE L +M R LV
Sbjct: 92 FGDDWKSALGFFQWAQSRDD-YRHTAYACNRMVDLLGKMRQIDQMWELLSDMHGRGLVTV 150
Query: 109 KTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK 168
+T ++ LA R K +V F + D G E + E +N ++ LC+ + + A+ +
Sbjct: 151 ETVAKSIRRLAGARRWKDVVLLFDKLEDMGLERNTETMNVLLDVLCKERKIEVAREVFAV 210
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNL--MTDEGFEPSIDVVDKMIETFFKIN 226
LS I P+ + + G+C + + EA +W + M GF PS+ ++E + K
Sbjct: 211 LSPHIPPDAYTFNIFVHGWCSIRRIDEA--MWTIEEMKRRGFPPSVITYTTVLEAYCKQR 268
Query: 227 KDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTL 286
+V M + + TY +++ + K + +A ++ M G + D L
Sbjct: 269 NFRRVYEVLDSMGSQGCHP-NVITYTMIMTSLAKCERFEEALSVSHRMKSSGCKPDTLFY 327
Query: 287 SSIIYGLLARGRLREAYKVVEEIEKP------DISLYHGLIKGLLRLRRAREATQVFREM 340
+S+I L G L EA +V +E P +++ Y+ +I R +A V +EM
Sbjct: 328 NSLINLLGKSGHLFEASQVF-RVEMPMNGVSHNLATYNTMISIFCYYGRDDDALNVLKEM 386
Query: 341 IKRGCEPTMHTYIMLLQGHLGKRGR 365
+ C+P + +Y LL+ L +RG+
Sbjct: 387 EAQSCKPDIQSYRPLLRLFLSRRGQ 411
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 144/303 (47%), Gaps = 20/303 (6%)
Query: 139 CEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEAS 197
CE ++ ++ LC+ + EA K+ + PNE Y LI G+C V + A
Sbjct: 3 CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 62
Query: 198 KIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDW 257
+ M + G P++ +I F + K D A K+F+ M V+ L TY ++
Sbjct: 63 LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQM-VENGCMPNLVTYNTLLSG 121
Query: 258 MCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PD 313
+C+ G + +AY +L+EM +RG++ D + +++ GL G++ A KV E+ PD
Sbjct: 122 LCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPD 181
Query: 314 ISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR-------- 365
+ Y LI GL + R EA ++F +M + CEP + T+ L+ G L K R
Sbjct: 182 VVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDG-LCKGDRLQEAQQVL 240
Query: 366 -----KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE 420
+ P V + + GL K G+ DA + +R++ RG+E YN +H +
Sbjct: 241 ETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMT 300
Query: 421 EGV 423
GV
Sbjct: 301 NGV 303
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 184/440 (41%), Gaps = 65/440 (14%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
N T+N +++ K + + L+EM L N T+ + ++ F
Sbjct: 41 NEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLF 100
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
M + GC +L N ++ LC+ L+ EA L+ ++ E ++P++ +Y L+ G C
Sbjct: 101 RQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKT 160
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR----------- 239
G + A K++ ++ P + +I K + DEA K+F+ MR
Sbjct: 161 GKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTF 220
Query: 240 -------------------VKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFK 276
++ M+D + TY +ID +CK G++ A + + M
Sbjct: 221 TALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIV 280
Query: 277 RGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRARE 332
RGIE + +T +S+I+G + A ++EE+ PDI Y+ LI GL + RA E
Sbjct: 281 RGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPE 340
Query: 333 ATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKG---------------PDPLVNFDTI 377
A ++F +M + C P + TY L+ G K R PD +V F T+
Sbjct: 341 ANRLFGDMKAKFCNPDVITYSCLIGGFC-KLERIDMARTLFDDMLKQAVLPD-VVTFSTL 398
Query: 378 FVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVG 437
V G AG DA + +E ++ + Y + + +V V K++ + G
Sbjct: 399 -VEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRG 457
Query: 438 L-------ADLADIFQRYGK 450
L D F R GK
Sbjct: 458 CQPNVVTYTALIDAFCRAGK 477
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 163/379 (43%), Gaps = 28/379 (7%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHI 133
+TF ++D + K + + L+ M R N T+ + L + +++ F
Sbjct: 218 VTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKR 277
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M G E ++ N ++ C V A L+ +++ P+ I Y LI G C G
Sbjct: 278 MIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGR 337
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ-MMRVKRMDDLGLSTY 251
EA++++ M + P + +I F K+ + D A +F M++ + D+ T+
Sbjct: 338 APEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDV--VTF 395
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK 311
+++ C G + A +LEEM D T +S++ G GR+ EA +V++ + K
Sbjct: 396 STLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAK 455
Query: 312 ----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG----KR 363
P++ Y LI R + A ++ EM+ G +P + TY L+ G G +
Sbjct: 456 RGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEE 515
Query: 364 GRKGPDPLVNFDT---------IFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
RK + L + + + GL + G+ A + +E + G PR D
Sbjct: 516 ARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTP-PRHDI---- 570
Query: 415 HYYSNEEGVVMFEEVGKKL 433
Y + G+ +E+GK +
Sbjct: 571 -YVALIRGLCQGKELGKAM 588
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 120/274 (43%), Gaps = 7/274 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
IT++ ++ K ID+ +M ++ ++ D TF + +
Sbjct: 358 ITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEE 417
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M C + +V C+ +VEA+ ++ ++++ +PN + Y LI +C G
Sbjct: 418 MVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGK 477
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
A K+ M G +P++ +I F +EA K+ + + + YR
Sbjct: 478 PTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYR 537
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI--- 309
+++D +C+ G++S A +LE + + G + ++I GL L +A +V+EE+
Sbjct: 538 VMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLS 597
Query: 310 --EKPDISLYHGLIKGLLRLRRAREATQVFREMI 341
+P+ Y +I+ L R R EA + E++
Sbjct: 598 RKSRPNAEAYEAVIQELAREGRHEEANALADELL 631
>gi|255580124|ref|XP_002530894.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529547|gb|EEF31500.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 195/418 (46%), Gaps = 27/418 (6%)
Query: 8 LVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQI---CNNFPLSWRPVYLFFQYTQ 64
LV + + +P L SL++ + +++ Q+ C N S + +L+
Sbjct: 43 LVNEISRILSDHRNPHHDLELSLTTYSSHISTTLVEQVLKRCKNLGFSAQRFFLW----A 98
Query: 65 KAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRR--LVNDKTFKIALMTLAEVR 122
K P F H+ +++ +VDI+G S+ L W+ L E+ + ++ + F + +
Sbjct: 99 KRIPGFDHSKESYHILVDILGSSKQFALLWDFLIEIRESQDFEISPQVFWLVFRAYSRAN 158
Query: 123 ELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGW 182
+ F M + G + +++ L++++ LC+RK A+ + ++ + Y
Sbjct: 159 LPSDAIRAFDRMVEFGLKPTIDDLDQLLYVLCKRKHAKHAQQIFDRVKHQFQTRAKTYSI 218
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
L++G+ D+G+ + A K+++ M ++ + + ++E F K K EA K+F+ M
Sbjct: 219 LVRGWGDIGESVSACKVFDEMREQQCAVDVLAYNSLLEAFCKGGKVSEAYKMFREMGSNG 278
Query: 243 MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
+ T+ I I C+ I AY +L+EM + + + T + +I L + ++ EA
Sbjct: 279 IKP-DACTFSIFIRAYCEANDIHLAYRVLDEMKRYDLVPNVFTYNCMIKKLCKKEKVEEA 337
Query: 303 YKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ- 357
Y+++ EI +PD Y+ ++ AT++ M+K C P H+Y MLL+
Sbjct: 338 YQLLNEIIERSGQPDAWSYNAILAYHCEHSEVNSATRLISRMVKDNCLPDKHSYNMLLKL 397
Query: 358 ----GHLGKR-------GRKGPDPLVNFDTIFVGGLV-KAGKSLDAAKYVERVMNRGV 403
G + G KG P V+ ++ V GL K GK +A KY E +++ G+
Sbjct: 398 LIRVGRFDRAIEVWESMGEKGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMIDEGI 455
>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 908
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 164/334 (49%), Gaps = 24/334 (7%)
Query: 73 NSITFNRMVDII---GKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
N +N M++ + GK +L + + E G ND T+ I + +L
Sbjct: 364 NLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNP--NDVTYTILIDGFGRRAKLDVAFY 421
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYC 188
+F+ M +CG ++ N ++ C+ + A+ L ++ + +KP Y LI GYC
Sbjct: 422 YFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYC 481
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLG 247
G + +A K+++ MT +G P+ +I +INK EA K+F +M+ +K + +
Sbjct: 482 KDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNE- 540
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
TY ++I+ C+ G ++A+ +L+EM K+G+ D T +I GL + GR+ EA + +
Sbjct: 541 -VTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFIN 599
Query: 308 EI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
++ ++ D Y L++G + R +EA +EM+ RG + + +Y +L+ G L +
Sbjct: 600 DLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQN 659
Query: 364 GR-----------KGPDPLVNFDTIFVGGLVKAG 386
R KG P TI + G +K+G
Sbjct: 660 DRILFELLREMHGKGMQPDNVIYTILIDGFIKSG 693
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 143/308 (46%), Gaps = 28/308 (9%)
Query: 142 SLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIW 200
+L + N ++ +LC+ + EA+ L ++E + PN++ Y LI G+ L A +
Sbjct: 364 NLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYF 423
Query: 201 NLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL----STYRIVID 256
N M + G ++ + MI K K MK+ +++ K M D GL +TY +I
Sbjct: 424 NKMIECGISATVYSYNSMINCQCKFGK----MKMAELL-FKEMVDKGLKPTVATYTSLIS 478
Query: 257 WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----P 312
CK G + +A+ + EM +GI + +T +++I GL ++ EA K+ +E+ + P
Sbjct: 479 GYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILP 538
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLV 372
+ Y+ LI+G R A ++ EMIK+G P +TY L+ G L GR
Sbjct: 539 NEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAG-LCSTGRVSEAKEF 597
Query: 373 NFD-------------TIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN 419
D T + G K G+ +A + ++ RG+++ Y + N
Sbjct: 598 INDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALN 657
Query: 420 EEGVVMFE 427
+ ++FE
Sbjct: 658 QNDRILFE 665
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/385 (21%), Positives = 163/385 (42%), Gaps = 57/385 (14%)
Query: 109 KTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-- 166
+T L LA +R+ ++++ F + + G + + VVK LC+ K +AK +I
Sbjct: 191 RTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQ 250
Query: 167 -----LKLS-----------------------------EWIKPNEIAYGWLIKGYCDVGD 192
LS + +K + + Y L+ G C + +
Sbjct: 251 AEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQE 310
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL-GLSTY 251
++ + M + G+ PS V +IE K+ + A ++ +V ++ + L Y
Sbjct: 311 FEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLN--KVGKLGVVPNLFVY 368
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY----KVVE 307
+I+ +CK GK+ +A + M +RG+ +++T + +I G R +L A+ K++E
Sbjct: 369 NSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIE 428
Query: 308 EIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG--- 364
+ Y+ +I + + + A +F+EM+ +G +PT+ TY L+ G+ K G
Sbjct: 429 CGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYC-KDGLVP 487
Query: 365 ----------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
KG P T + GL + K +A+K + ++ + YN +
Sbjct: 488 KAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLI 547
Query: 415 HYYSNEEGVVMFEEVGKKLREVGLA 439
+ E E+ ++ + GL+
Sbjct: 548 EGHCREGNTTRAFELLDEMIKKGLS 572
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 97/230 (42%), Gaps = 38/230 (16%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
++P+ + Y LI G+ G+L +A + W +M EG+ P+ ++ FK +EA
Sbjct: 675 MQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAK 734
Query: 233 KVFQMMRVKR-----------MDDL----------------------GLSTYRIVIDWMC 259
+F+ M V +D L TY I+I C
Sbjct: 735 LLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGSFANTVTYNILIRGYC 794
Query: 260 KRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDIS 315
+ GK +A +L+ M G+ D +T S+ IY RG + A + E + KPD
Sbjct: 795 QIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRV 854
Query: 316 LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
+++ LI A Q+ +M+ RG +PT TY L+ L +R R
Sbjct: 855 VFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMV-QLAQRAR 903
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 119/258 (46%), Gaps = 15/258 (5%)
Query: 87 SRNIDLFWETLQEM-GRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEM 145
++N + +E L+EM G+ ++ + I + + LKK F++IM G +
Sbjct: 657 NQNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVT 716
Query: 146 LNKVVKTLCQRKLVVEAKYLILKL--SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLM 203
+V L + V EAK L ++ E I PN I YG + G++ A ++ N M
Sbjct: 717 YTALVNGLFKAGYVNEAKLLFKRMLVGEAI-PNHITYGCFLDHLTKEGNMENALQLHNAM 775
Query: 204 TDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ-MMRVKRMDDLGLSTYRIVIDWMCKRG 262
F ++ + +I + +I K EA K+ M+ + + D TY I CKRG
Sbjct: 776 LQGSFANTV-TYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDC--ITYSTFIYEYCKRG 832
Query: 263 KISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYH 318
+ A M E M +RG++ D + + +I+ G L A ++ ++ KP S YH
Sbjct: 833 NVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYH 892
Query: 319 GLIKGLLRLRRAREATQV 336
L+ L +RAR TQV
Sbjct: 893 SLMVQL--AQRAR-LTQV 907
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/311 (18%), Positives = 128/311 (41%), Gaps = 52/311 (16%)
Query: 179 AYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
+ LI+ Y +++ + NLM D G P + + ++ +I K + +++F +
Sbjct: 157 GFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTL 216
Query: 239 --------------------------RVKRMDD--------LGLSTYRIVIDWMCKRGKI 264
+ K + + L + TY + I+ +CK ++
Sbjct: 217 VNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRV 276
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGL 320
+A + + ++G++AD +T +++ GL ++++E+ + P + GL
Sbjct: 277 WEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGL 336
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR-------------KG 367
I+GL+++ A ++ ++ K G P + Y ++ L K G+ +G
Sbjct: 337 IEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINS-LCKTGKLEEAELLFSVMAERG 395
Query: 368 PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFE 427
+P TI + G + K A Y +++ G+ + YN ++ + M E
Sbjct: 396 LNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAE 455
Query: 428 EVGKKLREVGL 438
+ K++ + GL
Sbjct: 456 LLFKEMVDKGL 466
>gi|357115308|ref|XP_003559432.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Brachypodium distachyon]
Length = 570
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 99/409 (24%), Positives = 186/409 (45%), Gaps = 20/409 (4%)
Query: 11 VCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCF 70
V IL SPE+ + ++ C ++ +I F W + FF + AQ +
Sbjct: 99 VSRILSSHFASPEA-IVIAMDCCPVRVSGRMVDKILRRFGSDWVAAFGFFMWA-GAQEGY 156
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGR-RRLVNDKTFKIALMTLAEVRELKKMVN 129
H++ +N MVDI+GK + DL W +++M LV+ T + LA ++
Sbjct: 157 CHHADLYNLMVDILGKFKQFDLLWGLIRQMDEIGCLVSLATMTKVMRRLAGANRWTDAID 216
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCD 189
F+ M+ G + +N ++ TLC+ K V A+ + +L + P+E ++ L+ G+C
Sbjct: 217 AFNKMDQFGVVRDTKAMNALLDTLCKEKSVKRARGVFQELRGVVPPDESSFNTLVHGWCQ 276
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
L EA M + GF PS+ +IE + + KD + + + +
Sbjct: 277 ARMLNEARDTMKEMEEHGFSPSVITYTSLIEAYC-MEKDFQTVYAILNEMCSKGCRPNVI 335
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
TY IV+ + K G+ +A + +++ + G D +SIIY L GRL +A V +E+
Sbjct: 336 TYTIVMHALGKAGRTQEALDVFDKVKRDGCVPDASFYNSIIYILGRAGRLEDANSVFDEM 395
Query: 310 EK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG- 364
+ P +++++ +I +A A ++ +M ++ C+P + TY LL+ ++
Sbjct: 396 CRTGIPPTVAIFNTMISAACDHSQAENALKILVKMEEQSCKPDIKTYTPLLKLCCKRQWM 455
Query: 365 -----------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
RK P + + V L + GK + ++E ++ +G
Sbjct: 456 KILPFLICHMFRKDISPDFSTYILLVTWLCRNGKPAQSCLFLEEMVLKG 504
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 107/254 (42%), Gaps = 10/254 (3%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMV 128
F+ + IT+ +++ ++ + L EM + N T+ I + L + ++ +
Sbjct: 295 FSPSVITYTSLIEAYCMEKDFQTVYAILNEMCSKGCRPNVITYTIVMHALGKAGRTQEAL 354
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGY 187
+ F + GC N ++ L + + +A + ++ I P + +I
Sbjct: 355 DVFDKVKRDGCVPDASFYNSIIYILGRAGRLEDANSVFDEMCRTGIPPTVAIFNTMISAA 414
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV--FQMMRVKRMD- 244
CD A KI M ++ +P I K K+ + MK+ F + + R D
Sbjct: 415 CDHSQAENALKILVKMEEQSCKPDI----KTYTPLLKLCCKRQWMKILPFLICHMFRKDI 470
Query: 245 DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK 304
STY +++ W+C+ GK +Q+ LEEM +G T ++ L +G L A K
Sbjct: 471 SPDFSTYILLVTWLCRNGKPAQSCLFLEEMVLKGFMPKQETF-DLVMEKLDKGNLHSAKK 529
Query: 305 VVEEIEKPDISLYH 318
++ ++ +L H
Sbjct: 530 KIQHLKLRAAALKH 543
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 115/272 (42%), Gaps = 58/272 (21%)
Query: 170 SEWIKPNEIAYGWLI-----KGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFK 224
S+W+ A+G+ + +GYC DL +NLM +D++ K
Sbjct: 138 SDWVA----AFGFFMWAGAQEGYCHHADL------YNLM--------VDILGKF------ 173
Query: 225 INKDDEAMKVFQMM--RVKRMDDLG----LSTYRIVIDWMCKRGKISQAYTMLEEMFKRG 278
K F ++ +++MD++G L+T V+ + + + A +M + G
Sbjct: 174 --------KQFDLLWGLIRQMDEIGCLVSLATMTKVMRRLAGANRWTDAIDAFNKMDQFG 225
Query: 279 IEADNLTLSSIIYGLLARGRLREAYKVVEEIE---KPDISLYHGLIKGLLRLRRAREATQ 335
+ D +++++ L ++ A V +E+ PD S ++ L+ G + R EA
Sbjct: 226 VVRDTKAMNALLDTLCKEKSVKRARGVFQELRGVVPPDESSFNTLVHGWCQARMLNEARD 285
Query: 336 VFREMIKRGCEPTMHTYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGLV 383
+EM + G P++ TY L++ + L + KG P V TI + L
Sbjct: 286 TMKEMEEHGFSPSVITYTSLIEAYCMEKDFQTVYAILNEMCSKGCRPNVITYTIVMHALG 345
Query: 384 KAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
KAG++ +A ++V G YN ++
Sbjct: 346 KAGRTQEALDVFDKVKRDGCVPDASFYNSIIY 377
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 178/394 (45%), Gaps = 32/394 (8%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALMTLAEVRELKKMVNFFHI 133
+T+N ++D K +D L++M GRR T+ + + L
Sbjct: 268 VTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMED 327
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGD 192
M G L N ++ LC+ + EA L+ + E P+ + Y L+ G C +G
Sbjct: 328 MFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGK 387
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR-VKRMDDLGLSTY 251
+ +A + +M + G +P++ + MI+ F K K DE KV ++M+ V D+ TY
Sbjct: 388 VDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDV--VTY 445
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK 311
+ID CK ++ A+ +L GI D + SS++ GL + G++ EA +V++ + K
Sbjct: 446 STLIDGYCKANRMQDAFAIL------GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTK 499
Query: 312 ----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR-- 365
P S Y +I GL + R EA ++ + M +RGCEP ++TY +L+ G L K R
Sbjct: 500 QGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILING-LCKTKRVE 558
Query: 366 -----------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVM-NRGVEVPRFDYNKF 413
KG P V T + G K K +DAA + M + G E + YN
Sbjct: 559 DAINVLDVMLEKGCVPDVATYTSLIDGFCKINK-MDAAYQCFKTMRDSGCEPDKLAYNIL 617
Query: 414 LHYYSNEEGVVMFEEVGKKLREVGL-ADLADIFQ 446
+ + V EV + + E G D A F
Sbjct: 618 ISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFS 651
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 147/318 (46%), Gaps = 36/318 (11%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+T+N ++D + K+ ++ E L+ M + D T+ I + L ++ ++ +
Sbjct: 338 VTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEM 397
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE---------------------- 171
M + GC+ +L N ++ C+ V E ++ + E
Sbjct: 398 MLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANR 457
Query: 172 --------WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFF 223
I P++ +Y +++G C G + EA ++ +LMT +G P+ +I
Sbjct: 458 MQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLC 517
Query: 224 KINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADN 283
+ + DEA+K+ Q+M +R + L TY I+I+ +CK ++ A +L+ M ++G D
Sbjct: 518 DVERGDEALKMLQVMS-ERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDV 576
Query: 284 LTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFRE 339
T +S+I G ++ AY+ + + +PD Y+ LI G + +A +V +
Sbjct: 577 ATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQL 636
Query: 340 MIKRGCEPTMHTYIMLLQ 357
M+++GC P TY L++
Sbjct: 637 MLEKGCNPDAATYFSLMR 654
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 152/346 (43%), Gaps = 22/346 (6%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LK 168
T+ I + L + + + + M C + N ++ LC+ + A+ ++ +
Sbjct: 94 TYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMM 153
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
L P+ I Y LI G C L EA K+ M + G P + ++ K N+
Sbjct: 154 LERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQL 213
Query: 229 DEAMKVF-QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLS 287
+E K+ +M+ R D +Y V+ +C+ GK +A +LE+M ++ D +T +
Sbjct: 214 EEVSKLLEEMVEAGREPD--TFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYN 271
Query: 288 SIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
S++ G ++ EA +++E++ P + Y LI G R R +A +V +M K
Sbjct: 272 SLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKA 331
Query: 344 GCEPTMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLD 390
G P + TY LL G L K G+ K P V +I V GL K GK D
Sbjct: 332 GISPDLVTYNCLLDG-LCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDD 390
Query: 391 AAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREV 436
A +E ++ RG + +N + + V +V + ++EV
Sbjct: 391 ARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEV 436
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 166/361 (45%), Gaps = 25/361 (6%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRR-RLVNDKTFKIALMTLAEVRELKKMVNFF 131
+++ +N +++ + K ++ + L+EM R + ++ + L E + ++
Sbjct: 196 DTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKIL 255
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
M + C + N ++ C+ + EA+ L+ + P I Y LI G+
Sbjct: 256 EKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRA 315
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
L +A ++ M G P + + +++ K K +EA ++ ++M V++ + T
Sbjct: 316 DRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVM-VEKDCAPDVVT 374
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y I+++ +CK GK+ A +LE M +RG + + +T +++I G G++ E +KV+E ++
Sbjct: 375 YSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMK 434
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG--HLGK-- 362
+ PD+ Y LI G + R ++A + G P +Y +L+G GK
Sbjct: 435 EVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------GISPDKASYSSMLEGLCSTGKVE 488
Query: 363 --------RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
++G P + + +GGL + +A K ++ + RG E + Y+ +
Sbjct: 489 EAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILI 548
Query: 415 H 415
+
Sbjct: 549 N 549
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 123/273 (45%), Gaps = 33/273 (12%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEA-----SKIWNLMTDEGFEPSIDVVDKMIETFF 223
L+ P+ I + ++K YC +GDL A K+W P+ +I
Sbjct: 51 LARRFSPDVITHNTILKAYCQIGDLDRALSHFRGKMW-------CSPTAFTYCILIHGLC 103
Query: 224 KINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADN 283
+ + DEA ++ M +++ + Y +I +CK GKI A +L+ M +R D
Sbjct: 104 QCQRIDEAYQLLDEM-IQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDV 162
Query: 284 LTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFRE 339
+T +S+I G L EA K++E++++ PD Y+ L+ GL + + E +++ E
Sbjct: 163 ITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEE 222
Query: 340 MIKRGCEPTMHTY-----IMLLQGHLGKRG---------RKGPDPLVNFDTIFVGGLVKA 385
M++ G EP +Y + G + G + GPD +V ++++ + G K
Sbjct: 223 MVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPD-VVTYNSL-MDGFCKV 280
Query: 386 GKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYS 418
K +A + +E ++ R Y + +S
Sbjct: 281 SKMDEAERLLEDMVGRRCAPTVITYTTLIGGFS 313
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 119/269 (44%), Gaps = 25/269 (9%)
Query: 168 KLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINK 227
+ S+ KP+ YG LI G+ G+ +I N M F P + + +++ + +I
Sbjct: 15 RFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGD 74
Query: 228 DDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLS 287
D A+ F R K TY I+I +C+ +I +AY +L+EM ++ D +
Sbjct: 75 LDRALSHF---RGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYN 131
Query: 288 SIIYGLLARGRLREAYKV----VEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
+I GL G++ A V +E PD+ Y LI G + EA ++ +M +
Sbjct: 132 CLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKES 191
Query: 344 GCEPTMHTYIMLLQG---------------HLGKRGRKGPDPLVNFDTIFVGGLVKAGKS 388
G P Y LL G + + GR+ PD +++T+ V L ++GK
Sbjct: 192 GLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGRE-PDTF-SYNTV-VACLCESGKY 248
Query: 389 LDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
+A K +E+++ + YN + +
Sbjct: 249 EEAGKILEKMIEKKCGPDVVTYNSLMDGF 277
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 103/252 (40%), Gaps = 32/252 (12%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND------------------------ 108
N +TFN M+D K+ +D + L+ M D
Sbjct: 406 NLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL 465
Query: 109 ------KTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA 162
++ L L ++++ +M GC + ++ LC + EA
Sbjct: 466 GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEA 525
Query: 163 KYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIET 221
++ +SE +PN Y LI G C + +A + ++M ++G P + +I+
Sbjct: 526 LKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDG 585
Query: 222 FFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEA 281
F KINK D A + F+ MR + L+ Y I+I C+ G + +A +++ M ++G
Sbjct: 586 FCKINKMDAAYQCFKTMRDSGCEPDKLA-YNILISGFCQSGNVEKAIEVMQLMLEKGCNP 644
Query: 282 DNLTLSSIIYGL 293
D T S++ L
Sbjct: 645 DAATYFSLMRSL 656
>gi|326517954|dbj|BAK07229.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 549
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 183/406 (45%), Gaps = 20/406 (4%)
Query: 14 ILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHN 73
IL SPE+ + ++ C ++ +I F W + FF + AQ + H+
Sbjct: 102 ILTSCFASPEA-IVIAMDCCPVRVSDRMVDKILRRFGSDWVAAFGFFMWA-GAQEGYRHS 159
Query: 74 SITFNRMVDIIGKSRNIDLFWETLQEMGR-RRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
+ ++N MVDI+GK + DL W + +M LV+ T + LA ++ F+
Sbjct: 160 ADSYNSMVDILGKFKQFDLMWGLISQMDEIGGLVSLATMTKVMRRLAGASRWTDAIDAFN 219
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGD 192
M+ G +N ++ TLC+ + V A+ +L + P+E ++ L+ G+C
Sbjct: 220 KMDQFGVVKDTTAMNVLLDTLCKERSVKRARGAFQELRGSVPPDESSFNTLVHGWCKARM 279
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ EA + M + GF+PS+ +IE + + MR K + TY
Sbjct: 280 MNEARDMMKEMEEHGFKPSVITYTSLIEAYCMEKDFQTVYAILNEMRSKGCPP-NVITYT 338
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
IV+ + K G+ +A + +++ G D +S+IY L GRL +A VV+++
Sbjct: 339 IVMHALGKAGRTQEALDIFDKVRGDGCAPDASFYNSLIYILGRAGRLEDANSVVDKMRMT 398
Query: 311 --KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG---- 364
+P ++ ++ LI +A A ++ +M ++ C+P + TY LL+ ++
Sbjct: 399 GVRPTVATFNTLISAACDHSQAENALKMLVKMEEQSCKPDIKTYTPLLKLCCKRQWIKVL 458
Query: 365 --------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
RK P + T+ V L + GK + ++E ++ +G
Sbjct: 459 RFLICHMFRKDITPDFSTYTLLVTWLCRNGKPAQSCLFLEEMVLKG 504
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 107/254 (42%), Gaps = 28/254 (11%)
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM--RVKRMDDLG----LSTYRIVIDWMC 259
EG+ S D + M++ K K F +M + +MD++G L+T V+ +
Sbjct: 154 EGYRHSADSYNSMVDILGKF-------KQFDLMWGLISQMDEIGGLVSLATMTKVMRRLA 206
Query: 260 KRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE---KPDISL 316
+ + A +M + G+ D ++ ++ L ++ A +E+ PD S
Sbjct: 207 GASRWTDAIDAFNKMDQFGVVKDTTAMNVLLDTLCKERSVKRARGAFQELRGSVPPDESS 266
Query: 317 YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------------LGKRG 364
++ L+ G + R EA + +EM + G +P++ TY L++ + L +
Sbjct: 267 FNTLVHGWCKARMMNEARDMMKEMEEHGFKPSVITYTSLIEAYCMEKDFQTVYAILNEMR 326
Query: 365 RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVV 424
KG P V TI + L KAG++ +A ++V G YN ++ +
Sbjct: 327 SKGCPPNVITYTIVMHALGKAGRTQEALDIFDKVRGDGCAPDASFYNSLIYILGRAGRLE 386
Query: 425 MFEEVGKKLREVGL 438
V K+R G+
Sbjct: 387 DANSVVDKMRMTGV 400
>gi|11079489|gb|AAG29201.1|AC078898_11 hypothetical protein [Arabidopsis thaliana]
Length = 481
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 92/417 (22%), Positives = 190/417 (45%), Gaps = 19/417 (4%)
Query: 21 SPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRM 80
SP+ L S+L ++ E + N F + Y FFQ+++K Q + H+ ++ M
Sbjct: 46 SPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEK-QRHYEHSVRAYHMM 104
Query: 81 VDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCE 140
++ K R L W+ + M +++++N +TF I + A +++ + + F++M
Sbjct: 105 IESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLP 164
Query: 141 YSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIW 200
+L N ++ LC+ K V +A+ + + + P+ Y L++G+ +L +A +++
Sbjct: 165 PNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVF 224
Query: 201 NLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCK 260
M D G P I M++ K + DEA+ + + M Y +++
Sbjct: 225 REMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTF-IYSVLVHTYGT 283
Query: 261 RGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISL 316
++ +A EM + G++AD +S+I R++ Y+V++E++ P+
Sbjct: 284 ENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKS 343
Query: 317 YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG------------ 364
+ +++ L+ EA VFR+MIK CEP TY M+++ K+
Sbjct: 344 CNIILRHLIERGEKDEAFDVFRKMIK-VCEPDADTYTMVIKMFCEKKEMETADKVWKYMR 402
Query: 365 RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEE 421
+KG P ++ ++ + GL + + A +E ++ G+ + + EE
Sbjct: 403 KKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEE 459
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 172/348 (49%), Gaps = 21/348 (6%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+ +N ++D + K + + + EM + + D T+ + V +LK+ + +
Sbjct: 200 VMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNE 259
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAK-YLILKLSEWIKPNEIAYGWLIKGYCDVGD 192
M ++ N +V LC+ V EAK L + L +KP+ I Y L+ GY V +
Sbjct: 260 MVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYE 319
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ +A ++N M+ G P + +I F K DEA+ +F+ M K M G+ TY
Sbjct: 320 VKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVP-GIVTYS 378
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
+ID +CK G+IS + +++EM RG AD +T SS+I GL G L A + +++
Sbjct: 379 SLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQ 438
Query: 311 --KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH--------- 359
+P+I + L+ GL + R ++A +VF++++ +G ++TY +++ GH
Sbjct: 439 EIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEA 498
Query: 360 ---LGKRGRKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
L K G P F+TI + L K ++ A K + +++ RG+
Sbjct: 499 LTMLSKMEDNGCIPNAFTFETIII-ALFKKDENDKAEKLLRQMIARGL 545
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 139/313 (44%), Gaps = 19/313 (6%)
Query: 111 FKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-L 169
F L + A+++ V+ H + G + L LN ++ C + ++ K L
Sbjct: 62 FNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKIL 121
Query: 170 SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD 229
P+ + LIKG C G + +A + + +GF+ + +I KI
Sbjct: 122 KRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTR 181
Query: 230 EAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSI 289
A+K + + R+ + Y +ID MCK +S+AY + EM +GI AD +T +++
Sbjct: 182 AAIKFLRKID-GRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTL 240
Query: 290 IYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGC 345
IYG G+L+EA ++ E+ P++ Y+ L+ L + + +EA V M+K
Sbjct: 241 IYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACV 300
Query: 346 EPTMHTYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAK 393
+P + TY L+ G+ G P V+ TI + G K K +D A
Sbjct: 301 KPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCK-NKMVDEAL 359
Query: 394 YVERVMNRGVEVP 406
+ + M++ VP
Sbjct: 360 NLFKEMHQKNMVP 372
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/406 (20%), Positives = 173/406 (42%), Gaps = 71/406 (17%)
Query: 70 FAHNSITFNRMVD---IIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKK 126
+ +++T N ++ + G+ + F + L G + +N ++ + + ++ + +
Sbjct: 125 YPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQ--LNQVSYATLINGVCKIGDTRA 182
Query: 127 MVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIK 185
+ F ++ + + M N ++ +C+ +LV EA L +++ + I + + Y LI
Sbjct: 183 AIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIY 242
Query: 186 GYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM------- 238
G+C VG L EA + N M + P++ + +++ K K EA V +M
Sbjct: 243 GFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKP 302
Query: 239 ----------------RVKR-------MDDLGLS----TYRIVIDWMCKRGKISQAYTML 271
VK+ M +G++ TY I+I+ CK + +A +
Sbjct: 303 DVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLF 362
Query: 272 EEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRL 327
+EM ++ + +T SS+I GL GR+ + +++E+ + D+ Y LI GL +
Sbjct: 363 KEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKN 422
Query: 328 RRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGK 387
A +F +M + P + T+ TI + GL K G+
Sbjct: 423 GHLDRAIALFNKMKDQEIRPNIFTF-----------------------TILLDGLCKGGR 459
Query: 388 SLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN----EEGVVMFEEV 429
DA + + ++ +G + + YN ++ + EE + M ++
Sbjct: 460 LKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKM 505
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 173/355 (48%), Gaps = 19/355 (5%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVNFF 131
N + +N ++D + K + ++ ++ EM + + D AL++ + +LK ++ F
Sbjct: 224 NVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLF 283
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDV 190
+ M + + N +V C+ + E K + + + + IKPN + Y L+ GYC V
Sbjct: 284 NKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLV 343
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
++ +A I+N M G P I MI F KI K DEAM +F+ M K + + T
Sbjct: 344 KEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIP-DVVT 402
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y +ID + K G+IS A ++++M RG+ + T +SI+ L ++ +A ++ + +
Sbjct: 403 YSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFK 462
Query: 311 ----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------- 359
+PDIS Y LIKGL + + +A +VF +++ +G ++ Y +++QG
Sbjct: 463 DKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFN 522
Query: 360 -----LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFD 409
L K G P I + L K ++ A K + ++ RG+ + +D
Sbjct: 523 EALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLPLNFYD 577
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 190/418 (45%), Gaps = 32/418 (7%)
Query: 13 TILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAH 72
T+LY Q + +L +CN + N F + F + + + +
Sbjct: 103 TVLYLSQKMEFRGIKPNLVNCNI---------LINCFCQLGLIPFAFSVFAKILKMGYVP 153
Query: 73 NSITFNRM---VDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
++ITF + + + G+ + LF + + +G + ++ + L +V E + ++
Sbjct: 154 DTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFH--FDQISYGTLIHGLCKVGETRAALD 211
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYC 188
++ + ++ M N ++ ++C+ KLV EA L ++ S+ I P+ + Y LI G+C
Sbjct: 212 LLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFC 271
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
+G L +A ++N M E +P + + ++ F K K E VF MM +K+
Sbjct: 272 ILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMM-MKQGIKPNF 330
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY ++D C ++++A ++ M + G+ D + S +I G + EA + +E
Sbjct: 331 VTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKE 390
Query: 309 IEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG----H- 359
+ + PD+ Y LI GL + R A Q+ +M RG P + TY +L H
Sbjct: 391 MHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQ 450
Query: 360 -------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY 410
L K KG P ++ +I + GL ++GK DA K E ++ +G + + Y
Sbjct: 451 VDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAY 508
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 115/255 (45%), Gaps = 17/255 (6%)
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
++I+YG LI G C VG+ A + + +P++ + + +I++ K+ +EA +F
Sbjct: 189 DQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLF 248
Query: 236 QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
M K + + TY +I C GK+ A + +M I+ D T + ++
Sbjct: 249 SEMVSKGISP-DVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCK 307
Query: 296 RGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
G+++E V + + KP+ Y+ L+ G ++ +A +F M + G P + +
Sbjct: 308 DGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQS 367
Query: 352 YIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVM 399
Y +++ G + RK P V + + GL K+G+ A + V+++
Sbjct: 368 YSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMH 427
Query: 400 NRGVEVPRFDYNKFL 414
+RGV YN L
Sbjct: 428 DRGVPPNICTYNSIL 442
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 125/303 (41%), Gaps = 59/303 (19%)
Query: 146 LNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
NK++ +L + K YL K+ IKPN + LI +C +G + A ++ +
Sbjct: 88 FNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKIL 147
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
G+ P D + T+ + +C +G+I
Sbjct: 148 KMGYVP--DTI----------------------------------TFTTLSKGLCLKGQI 171
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGL 320
QA+ +++ G D ++ ++I+GL G R A +++ ++ +P++ +Y+ +
Sbjct: 172 QQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTI 231
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH--LGKRGR----------KGP 368
I + +++ EA +F EM+ +G P + TY L+ G LGK +
Sbjct: 232 IDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENI 291
Query: 369 DPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEE 428
P V I V K GK + + +M +G++ F+ Y S +G + +E
Sbjct: 292 KPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIK------PNFVTYNSLMDGYCLVKE 345
Query: 429 VGK 431
V K
Sbjct: 346 VNK 348
>gi|413937640|gb|AFW72191.1| hypothetical protein ZEAMMB73_762171 [Zea mays]
Length = 503
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 147/308 (47%), Gaps = 12/308 (3%)
Query: 53 WRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFK 112
W+P FF + Q ++H +RMVD++GK+R ID W+ L EM R LV T
Sbjct: 98 WKPALGFFLWAQSRGGGYSHTPYACSRMVDLLGKTRQIDRMWDLLSEMHCRGLVTVDTVA 157
Query: 113 IALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW 172
++ LA R+ + + F + D G E + E +N ++ LC+ K V A+ + + LS
Sbjct: 158 KSIRRLAAARKWRDAILLFDQLEDLGLERNTETMNVLLDALCKEKKVELAREVFVMLSPH 217
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNL--MTDEGFEPSIDVVDKMIETFFKINKDDE 230
I P+ + + G+C V + EA +W + M GF P + ++E + K
Sbjct: 218 IAPDAYTFNIFVHGWCSVRRIDEA--LWTIEEMKTRGFPPIVITYTAVLEAYCKQRNFRR 275
Query: 231 AMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
+V M + + TY +++ + K + +A ++ + M G + D L +++I
Sbjct: 276 VYEVLDSMGSQGCHP-NVITYTMIMTSLTKCERFEEALSVSDRMKSSGCKPDTLFYNALI 334
Query: 291 YGLLARGRLREAYKVVEEIEKP------DISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
L G L EA +V +E P +++ Y+ +I L + R +A V +EM +
Sbjct: 335 NLLGRAGHLFEANQVF-RVEMPRNGVLRNVATYNTMISILCQYGRDDDALGVLKEMEAQS 393
Query: 345 CEPTMHTY 352
C+P + TY
Sbjct: 394 CKPDLQTY 401
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 94/247 (38%), Gaps = 39/247 (15%)
Query: 67 QPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELK 125
P A ++ TFN V R ID T++EM R T+ L + R +
Sbjct: 215 SPHIAPDAYTFNIFVHGWCSVRRIDEALWTIEEMKTRGFPPIVITYTAVLEAYCKQRNFR 274
Query: 126 KMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLI 184
++ M GC ++ ++ +L + + EA + ++ S KP+ + Y LI
Sbjct: 275 RVYEVLDSMGSQGCHPNVITYTMIMTSLTKCERFEEALSVSDRMKSSGCKPDTLFYNALI 334
Query: 185 KGYCDVGDLIEASKIWNL-MTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM 243
G L EA++++ + M G ++ + MI + +DD+A+ V + M +
Sbjct: 335 NLLGRAGHLFEANQVFRVEMPRNGVLRNVATYNTMISILCQYGRDDDALGVLKEMEAQSC 394
Query: 244 D------------------------------------DLGLSTYRIVIDWMCKRGKISQA 267
L L TY ++I +CK G+ A
Sbjct: 395 KPDLQTYQPLLRLLLGRRGQAAAVHRLLSELRDRNGLGLDLDTYTLLIHGLCKVGETDWA 454
Query: 268 YTMLEEM 274
Y + +EM
Sbjct: 455 YLLYDEM 461
>gi|334183972|ref|NP_177860.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806398|sp|Q9FVX2.2|PP129_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g77360, mitochondrial; Flags: Precursor
gi|332197848|gb|AEE35969.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 517
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 92/417 (22%), Positives = 190/417 (45%), Gaps = 19/417 (4%)
Query: 21 SPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRM 80
SP+ L S+L ++ E + N F + Y FFQ+++K Q + H+ ++ M
Sbjct: 82 SPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEK-QRHYEHSVRAYHMM 140
Query: 81 VDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCE 140
++ K R L W+ + M +++++N +TF I + A +++ + + F++M
Sbjct: 141 IESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLP 200
Query: 141 YSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIW 200
+L N ++ LC+ K V +A+ + + + P+ Y L++G+ +L +A +++
Sbjct: 201 PNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVF 260
Query: 201 NLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCK 260
M D G P I M++ K + DEA+ + + M Y +++
Sbjct: 261 REMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTF-IYSVLVHTYGT 319
Query: 261 RGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISL 316
++ +A EM + G++AD +S+I R++ Y+V++E++ P+
Sbjct: 320 ENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKS 379
Query: 317 YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG------------ 364
+ +++ L+ EA VFR+MIK CEP TY M+++ K+
Sbjct: 380 CNIILRHLIERGEKDEAFDVFRKMIK-VCEPDADTYTMVIKMFCEKKEMETADKVWKYMR 438
Query: 365 RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEE 421
+KG P ++ ++ + GL + + A +E ++ G+ + + EE
Sbjct: 439 KKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEE 495
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 184/394 (46%), Gaps = 26/394 (6%)
Query: 58 LFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALM 116
LF ++ P + +T+N ++D K ++ + +++M V D T+ +
Sbjct: 67 LFADMNRRGCP---PSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMD 123
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKP 175
L + +++ + F+ M GC + N ++ LCQ+ + +A + ++ + I P
Sbjct: 124 GLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPP 183
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
+ +YG LI G G L EA K++ M D G PS + +I DEA+++F
Sbjct: 184 DSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELF 243
Query: 236 QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
+ MR K T+ I+ID CKRGK+ +A+ +L+ M G D +T S++I GL +
Sbjct: 244 KSMRSKGCRPSRF-TFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCS 302
Query: 296 RGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
R+ +A ++E++ KP + + LI GL + R +EA +V M+ G P + T
Sbjct: 303 IARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVT 362
Query: 352 YIMLLQGHL----GKRGR--------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVM 399
Y L+ GH +R R +G P V T V GL KA + +A ++
Sbjct: 363 YNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMK 422
Query: 400 NRGVEVPRFDYNKFLHYYSN----EEGVVMFEEV 429
+ G F Y + + + + G+ +F E+
Sbjct: 423 SSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEM 456
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 122/268 (45%), Gaps = 32/268 (11%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
+ P+ +YG LI G G L +A ++ + G PS +I N D+A
Sbjct: 6 VSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAR 65
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
++F M +R TY ++ID CKRG + +A ++++M + G D +T ++++ G
Sbjct: 66 ELFADMN-RRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDG 124
Query: 293 LLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
L GR+ EA + E+E+ P+ ++ +I GL + + +A QVF EM R P
Sbjct: 125 LCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPD 184
Query: 349 MHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRF 408
+Y I + GL KAGK +A K R+++ G+
Sbjct: 185 SWSY-----------------------GILIDGLAKAGKLNEAYKLFRRMLDSGITPSAV 221
Query: 409 DYNKFLH----YYSNEEGVVMFEEVGKK 432
YN +H Y+ +E + +F+ + K
Sbjct: 222 TYNVVIHGMCLAYTLDEALELFKSMRSK 249
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 97/195 (49%), Gaps = 7/195 (3%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
L + P+ +AY LI G C +A +++ M G PS + +I+ K
Sbjct: 37 LHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVIIDASCKRGML 96
Query: 229 DEAMKVF-QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLS 287
+EA + +M+ + D + TY V+D +CK G++ +A + EM + G + + +
Sbjct: 97 EEACDLIKKMIEDGHVPD--VVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHN 154
Query: 288 SIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
+II GL + ++ +A +V E+E PD Y LI GL + + EA ++FR M+
Sbjct: 155 TIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDS 214
Query: 344 GCEPTMHTYIMLLQG 358
G P+ TY +++ G
Sbjct: 215 GITPSAVTYNVVIHG 229
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 141/339 (41%), Gaps = 14/339 (4%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIM 134
TFN ++D K +D + L+ M V D T+ + L + + + M
Sbjct: 257 TFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDM 316
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGDL 193
C+ ++ N ++ LC+ + EA+ ++ +S P+ + Y L+ G+C G
Sbjct: 317 VKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQT 376
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
A ++ + M G P++ ++ K N+ EA VF M+ L TY
Sbjct: 377 ERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAP-NLFTYTA 435
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE----- 308
+I C G++ + EM GI D++ ++ L GR A +++ E
Sbjct: 436 LILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESL 495
Query: 309 -IEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKG 367
E +Y + GLL + A R+M++ G P L+ G L K G+ G
Sbjct: 496 RSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAG-LCKSGQGG 554
Query: 368 PDPLVNFDTIFVGGLVKAGKSLD-AAKYVERVMNRGVEV 405
V + + L GK+ AAK+VE ++ +G E+
Sbjct: 555 EARAVLEEIM---DLAYGGKARGKAAKFVEEMVGKGYEI 590
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/313 (20%), Positives = 119/313 (38%), Gaps = 55/313 (17%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRR----LVNDKTFKIALMTLAEVRELKKMVNF 130
+T++ ++ + +D L++M +R+ +V T L ++E +++++
Sbjct: 291 VTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLD- 349
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCD 189
M G + N +V C+ A+ L+ + + + PN + Y L+ G C
Sbjct: 350 --AMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCK 407
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK-------- 241
L EA ++ M G P++ +I F + D +K+F M
Sbjct: 408 ANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVV 467
Query: 242 ----------------------------RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEE 273
R + G YR +D + GK+ A + +
Sbjct: 468 YGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRD 527
Query: 274 MFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREA 333
M + G +S++ GL G+ EA V+EEI D++ Y G +G +A
Sbjct: 528 MVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIM--DLA-YGGKARG--------KA 576
Query: 334 TQVFREMIKRGCE 346
+ EM+ +G E
Sbjct: 577 AKFVEEMVGKGYE 589
>gi|242062226|ref|XP_002452402.1| hypothetical protein SORBIDRAFT_04g025130 [Sorghum bicolor]
gi|241932233|gb|EES05378.1| hypothetical protein SORBIDRAFT_04g025130 [Sorghum bicolor]
Length = 506
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 151/321 (47%), Gaps = 8/321 (2%)
Query: 53 WRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFK 112
W+ FF + Q ++H NRMVD++GK R ID W+ L EM R LV T
Sbjct: 101 WKSALGFFLWAQSRGGGYSHTPCACNRMVDLLGKMRQIDRMWDLLSEMHCRGLVTVDTIA 160
Query: 113 IALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW 172
++ LA R + + F + D G E + E +N ++ LC+ + V A+ + + LS
Sbjct: 161 KSIRRLAAARRWRDAILLFDQLEDLGLERNTETMNVLLDALCKERKVELAREVFVMLSPH 220
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
I P+ + + G+C V + EA M + GF P + ++E + K
Sbjct: 221 IAPDAYTFNIFVHGWCSVRRIDEAMWTIEEMKNRGFPPIVITYTAVLEAYCKQRNFRRVY 280
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
++ M + + TY +++ + K + +A ++ + M G + D L +++I
Sbjct: 281 EILDSMSSQGCHP-NVITYTMIMTSLTKCERFEEALSVSDRMKSSGCKPDTLFYNALINL 339
Query: 293 LLARGRLREAYKVVEEIEKP------DISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
L G L EA +V +E P +++ Y+ +I L + R +A V +EM + C+
Sbjct: 340 LGRAGHLFEANQVF-RVEMPRNVVPRNVATYNTMISILCQYGRDDDALDVLKEMEAQSCK 398
Query: 347 PTMHTYIMLLQGHLGKRGRKG 367
P + TY LL+ G+RG+ G
Sbjct: 399 PDLQTYQPLLRLLFGRRGQTG 419
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 114/255 (44%), Gaps = 10/255 (3%)
Query: 67 QPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELK 125
P A ++ TFN V R ID T++EM R T+ L + R +
Sbjct: 218 SPHIAPDAYTFNIFVHGWCSVRRIDEAMWTIEEMKNRGFPPIVITYTAVLEAYCKQRNFR 277
Query: 126 KMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLI 184
++ M+ GC ++ ++ +L + + EA + ++ S KP+ + Y LI
Sbjct: 278 RVYEILDSMSSQGCHPNVITYTMIMTSLTKCERFEEALSVSDRMKSSGCKPDTLFYNALI 337
Query: 185 KGYCDVGDLIEASKIWNLMTDEGFEP-SIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM 243
G L EA++++ + P ++ + MI + +DD+A+ V + M +
Sbjct: 338 NLLGRAGHLFEANQVFRVEMPRNVVPRNVATYNTMISILCQYGRDDDALDVLKEMEAQSC 397
Query: 244 DDLGLSTYRIVIDWM-CKRGKISQAYTMLEEMFKR---GIEADNLTLSSIIYGLLARGRL 299
L TY+ ++ + +RG+ + +L E+ R G++ D TL +I+GL G
Sbjct: 398 KP-DLQTYQPLLRLLFGRRGQTGAIHHLLSELRDRNGLGLDLDTYTL--LIHGLCRVGET 454
Query: 300 REAYKVVEEIEKPDI 314
AY++ +E+ +I
Sbjct: 455 DWAYQLYDEMVGSEI 469
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 158/294 (53%), Gaps = 7/294 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+ +N ++D + K ++++ ++ E +R+ D T+ + V +LK ++ F+
Sbjct: 334 VMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNK 393
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAK-YLILKLSEWIKPNEIAYGWLIKGYCDVGD 192
M + + +V C+ + EAK L + + + IKP+ + Y L+ GYC V +
Sbjct: 394 MTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNE 453
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ +A I+N M+ G ++ + MI F KI DEAMK+F+ M K++ + TY
Sbjct: 454 VNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFP-DVITYS 512
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
+ID +CK G+IS A +++EM RG + D +T +SI+ L + + +A ++ +++
Sbjct: 513 SLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQ 572
Query: 311 --KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
+PD++ Y L+KGL + + +A +VF +++ +G ++ Y +++QG K
Sbjct: 573 GIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDK 626
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 130/275 (47%), Gaps = 7/275 (2%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVNFFHIM 134
TF+ +VD K NI L M ++ + D +LM V E+ K + F+ M
Sbjct: 405 TFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTM 464
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDL 193
+ G +++ N ++ C+ K+V EA L ++ + I P+ I Y LI G C G +
Sbjct: 465 SHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRI 524
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
A ++ + M G +P I + +++ K + D+A+ + ++ + + ++TY I
Sbjct: 525 SYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRP-DMNTYTI 583
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK-- 311
++ +C+ GK+ A + E++ +G D + +I G +G EA ++ ++E+
Sbjct: 584 LVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENG 643
Query: 312 --PDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
PD Y +I L A ++ REMI RG
Sbjct: 644 CIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRG 678
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 110/255 (43%), Gaps = 17/255 (6%)
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
++++YG LI G C VG+ A ++ + +P + + + +I+ K ++A ++
Sbjct: 297 DQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLY 356
Query: 236 QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
KR+ + TY +I C GK+ A + +M + I D T S ++ G
Sbjct: 357 SEKVSKRIFP-DVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCK 415
Query: 296 RGRLREAYKVV----EEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
G ++EA V+ ++ KPD+ Y L+ G + +A +F M RG + +
Sbjct: 416 DGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQS 475
Query: 352 YIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVM 399
Y +++ G + K P V + + GL K+G+ A + V+ +
Sbjct: 476 YNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMH 535
Query: 400 NRGVEVPRFDYNKFL 414
RG + YN L
Sbjct: 536 YRGQQPDIITYNSIL 550
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 86/190 (45%), Gaps = 5/190 (2%)
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
+P+ I IKG+C G + +A + + GF +I K+ + A++
Sbjct: 260 EPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALE 319
Query: 234 VFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
+ + K + + Y +ID MCK ++ A+ + E + I D T +++I G
Sbjct: 320 LLRRNDGKLVQP-DVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGF 378
Query: 294 LARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
G+L++A + ++ PD+ + L+ G + +EA V M+K+ +P +
Sbjct: 379 CIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDV 438
Query: 350 HTYIMLLQGH 359
TY L+ G+
Sbjct: 439 VTYSSLMDGY 448
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 88/204 (43%), Gaps = 25/204 (12%)
Query: 244 DDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
D + L+T+ I C +G+I QA +++ G D ++ ++I GL G + A
Sbjct: 262 DTITLTTF---IKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAAL 318
Query: 304 KVVE----EIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
+++ ++ +PD+ +Y+ +I G+ + + +A ++ E + + P + TY L+ G
Sbjct: 319 ELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGF 378
Query: 360 ------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPR 407
K K P V +I V G K G +A + +M + ++
Sbjct: 379 CIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDV 438
Query: 408 FDYNKFLHYYSNEEGVVMFEEVGK 431
Y+ + +G + EV K
Sbjct: 439 VTYSSLM------DGYCLVNEVNK 456
>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 680
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 152/290 (52%), Gaps = 7/290 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHI 133
+ ++ ++D + K +N++ ++ EM RR+ N T+ + V +LK + F+
Sbjct: 211 VMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNK 270
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKY-LILKLSEWIKPNEIAYGWLIKGYCDVGD 192
M + N +V C+ V EAK L + + + IKP+ + Y L+ GYC V +
Sbjct: 271 MTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNE 330
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ A I N M+ G ++ + +I F KI D+AMK+F+ M K++ + TY
Sbjct: 331 VNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFP-NVITYN 389
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
+ID +CK G+IS A +++ M RG + D +T SSI+ L + +A ++ +++
Sbjct: 390 SLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQ 449
Query: 311 --KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+P++ Y LI GL + R +A +F +++ +G T++TY +++QG
Sbjct: 450 GIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQG 499
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 142/318 (44%), Gaps = 19/318 (5%)
Query: 50 PLSWRPVYLFFQYTQKAQPCFAHN---SITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV 106
P + P FQ+ + F H+ S TF+ D++ + LF L++
Sbjct: 19 PKKFHP----FQFPENTHFYFIHSFSTSTTFHNNNDVVDA---VSLFNCLLRQ---NPTP 68
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
D F L +L + + +++ F M G + + N ++ CQ L+ A ++
Sbjct: 69 PDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVL 128
Query: 167 LK-LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI 225
K L +P+ I IKG+C G + +A + + GF +I K+
Sbjct: 129 AKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKV 188
Query: 226 NKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
+ A+++ + + K + L + Y +ID MCK ++ A+ + EM R I ++ +T
Sbjct: 189 GETRAALELLRRVDGKLVQ-LDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVT 247
Query: 286 LSSIIYGLLARGRLREAY----KVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMI 341
S++I G G+L++A K+ E PD+ ++ L+ + R +EA M+
Sbjct: 248 YSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMM 307
Query: 342 KRGCEPTMHTYIMLLQGH 359
K+G +P + TY L+ G+
Sbjct: 308 KQGIKPDIVTYNSLMDGY 325
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 127/275 (46%), Gaps = 7/275 (2%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVNFFHIM 134
TFN +VD K + L M ++ + D +LM V E+ + + M
Sbjct: 282 TFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTM 341
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDL 193
+ G ++ N V+ C+ K+V +A L ++ + I PN I Y LI G C G +
Sbjct: 342 SHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRI 401
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
A ++ +LM D G +P I +++ K + D+A+ + ++ + + + TY I
Sbjct: 402 SYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRP-NMYTYTI 460
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK-- 311
+ID +CK G++ A + E++ +G T + +I G + G EA ++ +++
Sbjct: 461 LIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNS 520
Query: 312 --PDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
PD Y +I L +A ++ REMI RG
Sbjct: 521 CIPDAITYEIIICSLFDKDENDKAEKLLREMITRG 555
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 99/206 (48%), Gaps = 3/206 (1%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHIM 134
++N +++ K + +D + +EM +++ N T+ + L + + + +M
Sbjct: 352 SYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLM 411
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDL 193
+D G + + + ++ LC+ LV +A L++KL + I+PN Y LI G C G L
Sbjct: 412 HDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRL 471
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
+A I+ + +G+ +++ MI+ F DEA+ + M+ + TY I
Sbjct: 472 EDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAI-TYEI 530
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGI 279
+I + + + +A +L EM RG+
Sbjct: 531 IICSLFDKDENDKAEKLLREMITRGL 556
>gi|357134597|ref|XP_003568903.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Brachypodium distachyon]
Length = 537
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 171/371 (46%), Gaps = 24/371 (6%)
Query: 52 SWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRR---LVND 108
+W+ LFF + P +AH T+ M+DI+G+ + + L + E+ R +V +
Sbjct: 125 NWQVALLFFNWAA-GLPAYAHGPRTYTEMLDILGRMKKVKLMTQLFDEIPEERRGLVVTN 183
Query: 109 KTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK 168
+TF + L A ++++ + F+ D G E L ++ +LC+ K V EA+ L L+
Sbjct: 184 RTFAVLLNRYAGAHKVQEAIEMFYKRKDYGFEVDLVGFQILLMSLCRYKHVEEAEALFLQ 243
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
+ P ++ ++ G+C G L +A +IWN + +P + I + K K
Sbjct: 244 KKDEFPPVIKSWNIILNGWCVKGSLPDAKRIWNQIIASKLKPDLFTYGTFINSLTKAGKL 303
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
A+K+F M K ++ ++ +ID +C + KI +A + EM RG +AD T ++
Sbjct: 304 STAVKLFTSMWEKGINP-DVAICNCIIDQLCFKKKIPEALDIFREMTDRGCQADVATYNT 362
Query: 289 IIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+I R + Y++++++E P+ Y ++K + ++ + + M K G
Sbjct: 363 LIKYFCKIRRTEKVYELLDDMENKGCSPNNMTYSYILK---TTEKPKDVIHLLQRMEKSG 419
Query: 345 CEPTMHTYIMLLQGHLGKR------------GRKGPDPLVNFDTIFVGGLVKAGKSLDAA 392
C TY ++L ++ + R G P TI V GL G+ A
Sbjct: 420 CRLDSDTYNLILNLYVSMKYENGVQQVWDEMERNGSGPDQRSFTIMVHGLHSQGRLDQAL 479
Query: 393 KYVERVMNRGV 403
+Y + +RG+
Sbjct: 480 QYYTTMKSRGM 490
>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
Length = 457
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 162/366 (44%), Gaps = 27/366 (7%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALM-TLAEVRELKKMVNFFHI 133
+T++ ++ K+ ++ E L+E+ R L D +M +L + L + +
Sbjct: 83 VTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEE 142
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGD 192
M GC +L N ++ C+ K + A L+ ++ +K + + Y L+ G C G
Sbjct: 143 MIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGR 202
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
L EA ++ M G P + + K K A +V + MR D + TY
Sbjct: 203 LQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDP-NVVTYN 261
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKR-GIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK 311
++D +CK GKI A M+E+M G + + S+++ GL GR +EA V+E + +
Sbjct: 262 TILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMAR 321
Query: 312 ----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKG 367
PD+ Y L+ GL + + EA + REM GC+P TY L+ G L GR
Sbjct: 322 AGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHG-LCSCGRLA 380
Query: 368 P------------------DPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFD 409
P V+ +GGL KAG+ DA K+ +R+ ++G +
Sbjct: 381 EAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVS 440
Query: 410 YNKFLH 415
Y+ +
Sbjct: 441 YSTIVE 446
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 145/306 (47%), Gaps = 26/306 (8%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
TF + + L+ + M G + + N ++ LC+ + EA+ L+ ++
Sbjct: 154 TFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERM 213
Query: 170 -SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
+ P+ +AY + G C G ++ A ++ M D +P++ + +++ K K
Sbjct: 214 KASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKI 273
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
D A+++ + M L + Y V+D +CK G+ +A +++E M + G D +T SS
Sbjct: 274 DTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSS 333
Query: 289 IIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
++ GL G++ EA + V E+ KP+ Y L+ GL R EA ++ EM G
Sbjct: 334 LVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGG 393
Query: 345 -----CEPTMHTYIMLLQGHLGKRGR-------------KGPDP-LVNFDTIFVGGLVKA 385
C P++ TY L+ G L K GR +G DP V++ TI V GL ++
Sbjct: 394 GGGDHCPPSVSTYNALI-GGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTI-VEGLARS 451
Query: 386 GKSLDA 391
G++L A
Sbjct: 452 GRALQA 457
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 135/307 (43%), Gaps = 27/307 (8%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK- 233
PN + + L+ G+ G + ++ M G +P++ + ++E K+ + EA +
Sbjct: 8 PNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEEL 67
Query: 234 VFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
V M+ L TY ++ CK GK+ ++ +L+E+ RG+ D L + ++ L
Sbjct: 68 VRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASL 127
Query: 294 LARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
RL EA +++EE+ + P + ++ LI G R + A + + M G + +
Sbjct: 128 CKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADV 187
Query: 350 HTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVE 396
TY L+ G L K GR G P V + FV GL K+GK L+A + +E
Sbjct: 188 VTYNTLMDG-LCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLE 246
Query: 397 RVMNRGVEVPRFDYNKFLHYYSN----EEGVVMFEEV----GKKLREVGLADLADIFQRY 448
++ + + YN L + + M E++ G L VG + + D +
Sbjct: 247 QMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKL 306
Query: 449 GKKMATR 455
G+ R
Sbjct: 307 GRTQEAR 313
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 143/338 (42%), Gaps = 58/338 (17%)
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M+ GC + N +V ++ + + L+ ++ I+PN ++Y L++G C +
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60
Query: 193 LIEASKIWNLMTDEGFEPSIDVV--DKMIETFFKINKDDEAMKVFQ-----------MMR 239
EA ++ M G + D+V ++ + K K +E+ ++ + +M
Sbjct: 61 WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120
Query: 240 VKRMDDLGLS-----------------------TYRIVIDWMCKRGKISQAYTMLEEMFK 276
K M L S T+ +I C+ + A ++L+ M
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180
Query: 277 RGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRARE 332
G++AD +T ++++ GL GRL+EA +++E ++ PD+ Y + GL + +
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240
Query: 333 ATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR-----------KGPDP----LVNFDTI 377
A QV +M +P + TY +L G L K G+ D +V + T+
Sbjct: 241 AHQVLEQMRDSDHDPNVVTYNTILDG-LCKSGKIDTALEMMEQMASSDGCGLNVVGYSTV 299
Query: 378 FVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
V GL K G++ +A +E + G Y+ ++
Sbjct: 300 -VDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVN 336
>gi|225436259|ref|XP_002275952.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Vitis vinifera]
Length = 566
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 165/361 (45%), Gaps = 14/361 (3%)
Query: 6 GHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQK 65
G VR + Q+ S S + L SC + E +++ + W + FF + K
Sbjct: 80 GEFVRRIVDILQEPGSSMSLVKHKLESCGVAASSELVVEVLSRVRNHWEAAFTFFLWAAK 139
Query: 66 AQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEM--GR--RRLVNDKTFKIALMTLAEV 121
QP +AH+ ++ M+ I+GK R D W + EM GR LV T I + V
Sbjct: 140 -QPGYAHSLRAYHSMISILGKMRKFDTAWALIDEMRGGRTGTSLVTPHTLSIMIRRYCAV 198
Query: 122 RELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYG 181
++ K +N F+ +E ++ LC+ K V +A+ L+ + ++
Sbjct: 199 HDVGKAINTFYAHKQFKFGVGIEEFQNLLSALCRYKNVQDAEQLLFCNRNVFPFDTKSFN 258
Query: 182 WLIKGYCDV-GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
++ G+C+V G + EA + W M++ G + + +I + K+ ++ +K+F M+
Sbjct: 259 IILNGWCNVIGSMREAERFWREMSNRGIQRDVVSYSSIISCYSKVTNLNKVLKLFNQMKE 318
Query: 241 KRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
+ Y V+ + K + +A +++ M +GI D++T +S+I L ++
Sbjct: 319 MEIAP-DRKVYNAVVHALAKASFVKEALNLMKAMEGKGIAPDSVTYNSLIKPLSRARKIN 377
Query: 301 EAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
EA +V +E+ + P I YH + L+ E + +M + GC P TYIML+
Sbjct: 378 EAKEVFDEMLQRGLSPTIRTYHAFFR---ILKSGEEVFMLLEKMKETGCHPDKDTYIMLI 434
Query: 357 Q 357
+
Sbjct: 435 R 435
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 115/243 (47%), Gaps = 15/243 (6%)
Query: 74 SITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHI 133
+I N ++IG R + FW + G +R V ++ + ++V L K++ F+
Sbjct: 258 NIILNGWCNVIGSMREAERFWREMSNRGIQRDV--VSYSSIISCYSKVTNLNKVLKLFNQ 315
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGD 192
M + ++ N VV L + V EA L+ + + I P+ + Y LIK
Sbjct: 316 MKEMEIAPDRKVYNAVVHALAKASFVKEALNLMKAMEGKGIAPDSVTYNSLIKPLSRARK 375
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL---- 248
+ EA ++++ M G P+I + FF+I K E +VF M +++M + G
Sbjct: 376 INEAKEVFDEMLQRGLSPTI----RTYHAFFRILKSGE--EVF--MLLEKMKETGCHPDK 427
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY ++I C+ ++ + + EM + G+ D + +I+GL G+L EAYK E
Sbjct: 428 DTYIMLIRRFCRWRQLDNVFKLWSEMSENGVGPDRSSYIVLIHGLFLNGKLEEAYKYYIE 487
Query: 309 IEK 311
+++
Sbjct: 488 MKE 490
>gi|15232517|ref|NP_188138.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273407|sp|Q9LIL5.1|PP233_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15200
gi|11994509|dbj|BAB02574.1| unnamed protein product [Arabidopsis thaliana]
gi|332642110|gb|AEE75631.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/425 (24%), Positives = 193/425 (45%), Gaps = 27/425 (6%)
Query: 4 DPGHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYT 63
D + V I+ + S ++ L C +LT E L++ N W+P Y+ Q
Sbjct: 74 DKQSALDVHNIIKHHRGSSPEKIKRILDKCGIDLTEELVLEVVNRNRSDWKPAYILSQLV 133
Query: 64 QKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRR-LVNDKTFKIALMTLAEVR 122
K Q +S+ +N ++D++GK R + F + EM +R VN+KT+++ L A
Sbjct: 134 VK-QSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAH 192
Query: 123 ELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGW 182
++ + V F + G + L + ++ LC+ K V A+ L + A
Sbjct: 193 KVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNM 252
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM-RVK 241
++ G+C +G++ EA + W + P + MI K K +AM++++ M +
Sbjct: 253 ILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTR 312
Query: 242 RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
R D+ + VID +C + +I +A + E+ ++G + + +T +S++ L R +
Sbjct: 313 RNPDVKICNN--VIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEK 370
Query: 302 AYKVVEEIE------KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
+++VEE+E P+ + L+K +R+++ V M K CE T Y ++
Sbjct: 371 VWELVEEMELKGGSCSPNDVTFSYLLK---YSQRSKDVDIVLERMAKNKCEMTSDLYNLM 427
Query: 356 LQGHL------------GKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG- 402
+ ++ + R G P TI + GL GK +A Y + +M++G
Sbjct: 428 FRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGM 487
Query: 403 VEVPR 407
V PR
Sbjct: 488 VPEPR 492
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 89/204 (43%), Gaps = 19/204 (9%)
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA---YKVVEEI 309
++++ C G + +A +++ D ++ ++I L +G+L +A Y+ + +
Sbjct: 252 MILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDT 311
Query: 310 EK-PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR--- 365
+ PD+ + + +I L +R EA +VFRE+ ++G +P + TY LL+ HL K R
Sbjct: 312 RRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLK-HLCKIRRTEK 370
Query: 366 ----------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
KG N D F L + +S D +ER+ E+ YN
Sbjct: 371 VWELVEEMELKGGSCSPN-DVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFR 429
Query: 416 YYSNEEGVVMFEEVGKKLREVGLA 439
Y + E+ ++ GL
Sbjct: 430 LYVQWDKEEKVREIWSEMERSGLG 453
>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 548
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 154/296 (52%), Gaps = 7/296 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N++ +N ++D + K++ ++ ++ +M +R+ D T+ + + V +L ++ F
Sbjct: 200 NAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLF 259
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKY-LILKLSEWIKPNEIAYGWLIKGYCDV 190
+ M ++ N +V C+ V +AK L + + + IKP+ + Y L+ GYC +
Sbjct: 260 NKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSI 319
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
+ +A I++ M G ++ + M+ F KI DEA+ +F+ MR +++ + T
Sbjct: 320 NKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIP-NVVT 378
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y +ID +CK G+I A +++EM RG + +T SSI+ L + +A ++ ++
Sbjct: 379 YSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLK 438
Query: 311 ----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
+PD+ Y LIKGL + R +A VF +++ +G ++ Y +++QG K
Sbjct: 439 DQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDK 494
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 127/280 (45%), Gaps = 11/280 (3%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVNFF 131
N TFN +VD K ++ L M + + D +LM + ++ K + F
Sbjct: 270 NVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIF 329
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
M G ++++ +V C+ K+V EA L ++ I PN + Y LI G C +
Sbjct: 330 DSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKL 389
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK--RMDDLGL 248
G + A K+ + M D G P+I +++ K + D+A+ + ++ + R D +
Sbjct: 390 GRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPD---M 446
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY I+I +C+ G++ A + E++ +G D + +I G +G +A ++ +
Sbjct: 447 YTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSK 506
Query: 309 IEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+E P+ Y +I L A ++ REMI RG
Sbjct: 507 MEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRG 546
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 151/333 (45%), Gaps = 43/333 (12%)
Query: 74 SITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFH 132
+ FN+++ + K+++ Q+M + +D TF I + +++ + F
Sbjct: 61 TFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFA 120
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVG 191
+ G + N ++K LC + + +A + K+ ++ ++++YG LI G C VG
Sbjct: 121 KILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVG 180
Query: 192 DLIEASKI---------------WNLMTD---------EGFE-----------PSIDVVD 216
+ A ++ +N++ D + F+ P + +
Sbjct: 181 RITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYN 240
Query: 217 KMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFK 276
+I F ++K + A+ +F M+ + ++ + T+ I++D CK GK++ A +L M K
Sbjct: 241 ALISGFSAVSKLNYAIDLFNKMKKENINP-NVYTFNILVDGFCKEGKVNDAKVVLAIMMK 299
Query: 277 RGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRARE 332
I+ D +T +S++ G + ++ +A + + + ++ +Y ++ G +++ E
Sbjct: 300 DDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDE 359
Query: 333 ATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
A +F EM R P + TY L+ G L K GR
Sbjct: 360 AINLFEEMRCRKIIPNVVTYSSLIDG-LCKLGR 391
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 96/209 (45%), Gaps = 11/209 (5%)
Query: 77 FNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHIMN 135
+ MV+ K + +D +EM R+++ N T+ + L ++ + + M+
Sbjct: 344 YTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMH 403
Query: 136 DCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLI 194
D G ++ + ++ LC+ V +A L+ L + I+P+ Y LIKG C G L
Sbjct: 404 DRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLE 463
Query: 195 EASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL----ST 250
+A ++ + +G+ + MI+ F D+A+ + + +M+D G T
Sbjct: 464 DAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALAL-----LSKMEDNGCIPNAKT 518
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGI 279
Y +VI + ++ + A +L EM RG+
Sbjct: 519 YELVILSLFEKDENDTAEKLLREMIVRGL 547
>gi|357142780|ref|XP_003572691.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Brachypodium distachyon]
Length = 501
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 177/384 (46%), Gaps = 28/384 (7%)
Query: 47 NNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV 106
+ F W+ FQ+ Q + + H + +RM+D++GK R ID W+ L +M R LV
Sbjct: 91 SKFGDDWKSALGLFQWAQSSGN-YKHTAYACSRMIDLLGKMRQIDQMWDLLSDMHCRGLV 149
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
+ ++ LA R K V F + D G E + E +N ++ LC+ K V A+ +
Sbjct: 150 TVEAAATSIRRLAGARRWKDAVLLFDKLGDMGLERNTETMNVLLDALCKEKKVEVARKVF 209
Query: 167 LKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNL--MTDEGFEPSIDVVDKMIETFFK 224
L LS I+P+ + + G+C + EA +W + M +GF PS+ ++E + K
Sbjct: 210 LVLSPHIQPDAYTFNIFVHGWCSARRIDEA--MWTIEEMKAQGFPPSVITYTTVLEAYCK 267
Query: 225 INKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNL 284
+ ++ M + + TY +++ + K +A ++ M G + D L
Sbjct: 268 QHNFRMVYEILDSMSSEGCHP-NVITYTMIMTSLAKCHMFEEALSVSHRMKSSGCKPDTL 326
Query: 285 TLSSIIYGLLARGRLREAYKVVEEIEKP------DISLYHGLIKGLLRLRRAREATQVFR 338
+S+I L G L EA +V ++E P ++ Y+ +I +A V +
Sbjct: 327 FYNSLINLLGKAGHLSEASQVF-QVEMPMNGVPRSLATYNTMISVFCYKDLDEDALSVLK 385
Query: 339 EMIKRGCEPTMHTYIMLLQGHLGKRG-----RKGPDPLVN-----FD----TIFVGGLVK 384
EM + C+P + TY LL+ L +RG R + L+N D T+ + GL +
Sbjct: 386 EMETQSCKPDLQTYRPLLRLFLSRRGQDDTVRNLLNELMNKHSLGLDLDTYTLLIHGLCR 445
Query: 385 AGKSLDAAKYVERVMNRGVEVPRF 408
G++ A + + ++ + VPR+
Sbjct: 446 VGETDWAYRLFDEMVGSEI-VPRY 468
>gi|356495784|ref|XP_003516753.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Glycine max]
Length = 558
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 181/412 (43%), Gaps = 21/412 (5%)
Query: 9 VRVCTILYQQQYSPESRLHS-SLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQ 67
+ T + Q++Y P L S +L +F + Q+ N F W P FF++ K+
Sbjct: 97 LEAVTKVLQKRY-PSPELASLALDGLSFQPSSGLVSQVLNRFSNDWVPALGFFKWA-KSL 154
Query: 68 PCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGR-RRLVNDKTFKIALMTLAEVRELKK 126
+ H+ +N MVDI+GK R+ D E ++EM R V +T + LA R+ +
Sbjct: 155 TGYRHSPELYNLMVDILGKCRSFDSMSELVEEMARLEGYVTLETMTKVMRRLARARKHED 214
Query: 127 MVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKG 186
+ F M G + LN ++ L + V A ++L+ I + ++ L+ G
Sbjct: 215 AIEAFGRMEKFGVKKDTAALNVLIDALVKGDSVEHAHKVVLEFKGSIPLSSRSFNVLMHG 274
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
+C D A K M + GFEP + IE + + +V + MR
Sbjct: 275 WCRARDFDNARKAMEDMKEHGFEPDVFSYTNFIEAYGHERDFRKVDQVLEEMRENGCPPN 334
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
+ TY V+ + K G++ +A + E+M G AD SS+I+ L GRL++A V
Sbjct: 335 AV-TYTSVMLHLGKAGQLRKALEVYEKMKSDGCVADTPFYSSMIFILGKAGRLKDACDVF 393
Query: 307 EEIEKP----DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH--- 359
E++ K D+ Y+ +I R A ++ +EM C+P + TY LL+
Sbjct: 394 EDMPKQGVVRDVVTYNSMISTACAHSREETALRLLKEMEDGSCKPNVGTYHRLLKMCCKK 453
Query: 360 ---------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
L + P + ++ V L K+GK DA ++E ++ RG
Sbjct: 454 KRMKVLKFLLDHMFKNNISPDLATYSLLVNALRKSGKVEDAYSFLEEMVLRG 505
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 56/290 (19%), Positives = 118/290 (40%), Gaps = 17/290 (5%)
Query: 38 THEFFLQICNNFPLSWRPVYLF---------FQYTQKA-----QPCFAHNSITFNRMVDI 83
H+ L+ + PLS R + F +KA + F + ++ ++
Sbjct: 250 AHKVVLEFKGSIPLSSRSFNVLMHGWCRARDFDNARKAMEDMKEHGFEPDVFSYTNFIEA 309
Query: 84 IGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYS 142
G R+ + L+EM N T+ ++ L + +L+K + + M GC
Sbjct: 310 YGHERDFRKVDQVLEEMRENGCPPNAVTYTSVMLHLGKAGQLRKALEVYEKMKSDGCVAD 369
Query: 143 LEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLIEASKIWN 201
+ ++ L + + +A + + + + + + Y +I C A ++
Sbjct: 370 TPFYSSMIFILGKAGRLKDACDVFEDMPKQGVVRDVVTYNSMISTACAHSREETALRLLK 429
Query: 202 LMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKR 261
M D +P++ ++++ K + + +K K L+TY ++++ + K
Sbjct: 430 EMEDGSCKPNVGTYHRLLKMCCKKKRM-KVLKFLLDHMFKNNISPDLATYSLLVNALRKS 488
Query: 262 GKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK 311
GK+ AY+ LEEM RG TL + L ++ L E +V E +++
Sbjct: 489 GKVEDAYSFLEEMVLRGFTPKPSTLKKLAGELESKSMLEEKVRVEEWMDR 538
>gi|255580475|ref|XP_002531063.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529358|gb|EEF31324.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/415 (21%), Positives = 199/415 (47%), Gaps = 25/415 (6%)
Query: 11 VCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCF 70
+C +L + +P S + L +F ++ L++ + FF++ +K Q F
Sbjct: 88 ICRLLSK---NPNSSIEKLLLGASFKVSPALVLEVLKRLSNAGALALSFFKWAEK-QKGF 143
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNF 130
+N+ ++N ++D +GK + ++ W + +M R+ ++ +TF + A ++K+ +N
Sbjct: 144 MYNTESYNALIDSLGKIKQFNMIWNLVNDMKRKGVLTKETFALISRRYARSGKVKEAMNT 203
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI--LKLSEWIKPNEIAYGWLIKGYC 188
F M G + N+++ TL + + V+ A+ + +K+ ++ P+ +Y L++G+
Sbjct: 204 FEKMEKFGLKIESTDFNRLLDTLIKSRQVLSAQNVFDKMKIRRFV-PDIKSYTILLEGWG 262
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
+L++ +++ M DEGFEP + +I + K+ K D+A+++F+ M K
Sbjct: 263 QEKNLLKLDEVYREMKDEGFEPDVVTYGILINAYCKVRKYDDAIELFREMESKNCQP-SP 321
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
+ +I+ + ++S+A G + T ++++ R+ +AY++V+E
Sbjct: 322 HIFCTLINGLGSVRRLSEALEFFRRSKASGFAPETPTYNAVVGAYCWSMRIDDAYRMVDE 381
Query: 309 IEK----PDISLYHGLIKGLLRLRRAREATQVFREM-IKRGCEPTMHTYIMLLQGHLG-- 361
+ K P+ Y ++ L++ + EA VF +M + CEPT+ TY ++++
Sbjct: 382 MRKSGVGPNSRTYDIILHHLIKAEKTTEAFSVFEKMSSEEECEPTVSTYDIIVRMFCNMD 441
Query: 362 ----------KRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
+ KG P ++ +I + L K A KY + +++ G+ P
Sbjct: 442 KVESAIKVWDRMKAKGVHPGMHMFSILINSLCHENKLDIACKYFQEMLDVGIRPP 496
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 105/253 (41%), Gaps = 4/253 (1%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAE 120
Y + F + +T+ +++ K R D E +EM + + F + L
Sbjct: 274 YREMKDEGFEPDVVTYGILINAYCKVRKYDDAIELFREMESKNCQPSPHIFCTLINGLGS 333
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIA 179
VR L + + FF G N VV C + +A ++ ++ + PN
Sbjct: 334 VRRLSEALEFFRRSKASGFAPETPTYNAVVGAYCWSMRIDDAYRMVDEMRKSGVGPNSRT 393
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMT-DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
Y ++ EA ++ M+ +E EP++ D ++ F ++K + A+KV+ M
Sbjct: 394 YDIILHHLIKAEKTTEAFSVFEKMSSEEECEPTVSTYDIIVRMFCNMDKVESAIKVWDRM 453
Query: 239 RVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR 298
+ K + G+ + I+I+ +C K+ A +EM GI S + L+ GR
Sbjct: 454 KAKGVHP-GMHMFSILINSLCHENKLDIACKYFQEMLDVGIRPPAALFSHLKQALIEDGR 512
Query: 299 LREAYKVVEEIEK 311
+ ++I+K
Sbjct: 513 KDTVVLLAQKIDK 525
>gi|2827705|emb|CAA16678.1| predicted protein [Arabidopsis thaliana]
Length = 598
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 162/327 (49%), Gaps = 28/327 (8%)
Query: 57 YLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRR--RLVNDKTFKIA 114
Y FF + K QP + H+ + MV I+ K R W ++EM + +L+ + F +
Sbjct: 124 YRFFVWAAK-QPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVL 182
Query: 115 LMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLV--------------- 159
+ A +KK + M G E + ++ LC+ V
Sbjct: 183 VQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRVG 242
Query: 160 --VEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVD 216
+EAKY++++++E +P+ + Y L+ GY + G + +A + M GFEP+ +
Sbjct: 243 KMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYT 302
Query: 217 KMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMF 275
+I+ K+++ +EAMKVF +M R + D + TY ++ CK GKI + Y +L++M
Sbjct: 303 VLIQALCKVDRMEEAMKVFVEMERYECEAD--VVTYTALVSGFCKWGKIDKCYIVLDDMI 360
Query: 276 KRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAR 331
K+G+ LT I+ + E +++E++ + PDI +Y+ +I+ +L +
Sbjct: 361 KKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVK 420
Query: 332 EATQVFREMIKRGCEPTMHTYIMLLQG 358
EA +++ EM + G P + T+++++ G
Sbjct: 421 EAVRLWNEMEENGLSPGVDTFVIMING 447
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 112/243 (46%), Gaps = 17/243 (6%)
Query: 126 KMVNFFHIMNDC---GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYG 181
KM + + ++ D G E + +++ LC+ + EA + +++ + + + + Y
Sbjct: 278 KMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYT 337
Query: 182 WLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR-V 240
L+ G+C G + + + + M +G PS ++ K +E +++ + MR +
Sbjct: 338 ALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQI 397
Query: 241 KRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
+ D+G+ Y +VI CK G++ +A + EM + G+ T +I GL ++G L
Sbjct: 398 EYHPDIGI--YNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLL 455
Query: 301 EAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRG-CEPTMHTYIMLLQGH 359
EA +E+ L+ +L+ ++ A V+ + +G CE + ++ + +
Sbjct: 456 EASDHFKEM---------LLLNTVLKDKKLEMAKDVWSCITSKGACELNVLSWTIWIHAL 506
Query: 360 LGK 362
K
Sbjct: 507 FSK 509
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 154/296 (52%), Gaps = 7/296 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N + ++ ++D + K + ++ ++ EM +R+ D T+ + V +LK V+ F
Sbjct: 197 NVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLF 256
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAK-YLILKLSEWIKPNEIAYGWLIKGYCDV 190
+ M ++ + ++ C+ V EAK L + + + +K + + Y L+ GYC V
Sbjct: 257 NRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLV 316
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
+ +A ++N+M G P + MI F KI DEAMK+F+ M K++ + T
Sbjct: 317 KQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFP-NVVT 375
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y ++D +CK G+ S A +++EM RG ++ +T +SI+ + + +A ++ +I+
Sbjct: 376 YNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIK 435
Query: 311 ----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
+PDI Y LI GL ++ R +A +VF +++ +G P ++TY L+ G K
Sbjct: 436 EKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNK 491
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 147/306 (48%), Gaps = 22/306 (7%)
Query: 145 MLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLM 203
M + ++ ++C+ KLV +A L ++ S+ I P+ + Y LI G+C VG L A ++N M
Sbjct: 200 MYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRM 259
Query: 204 TDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGK 263
+ P++ +I+ F K K EA V +M +K+ L + TY ++D C +
Sbjct: 260 ISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVM-MKKNVKLDVVTYNSLMDGYCLVKQ 318
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHG 319
+++A ++ M +RG+ D + S +I G + EA K+ EE+ P++ Y+
Sbjct: 319 VNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNS 378
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG-----H-------LGKRGRKG 367
L+ GL + R A ++ EM RG + TY +L H L K KG
Sbjct: 379 LVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKG 438
Query: 368 PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN----EEGV 423
P + T+ + GL K G+ DA K E ++ +G + Y ++ + N +EG+
Sbjct: 439 IQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGL 498
Query: 424 VMFEEV 429
M ++
Sbjct: 499 AMLSKM 504
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 146/315 (46%), Gaps = 22/315 (6%)
Query: 149 VVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEG 207
++K LC + V +A Y K+ ++ + ++++YG LI G C VG+ A ++ + +
Sbjct: 134 LIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKL 193
Query: 208 FEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQA 267
P++ + +I++ K ++A ++ M KR+ + TY +I C GK+ A
Sbjct: 194 VRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISP-DVVTYSSLISGFCVVGKLKYA 252
Query: 268 YTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISL----YHGLIKG 323
+ M I + T S +I G G++REA V+ + K ++ L Y+ L+ G
Sbjct: 253 VDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDG 312
Query: 324 LLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR-------------GRKGPDP 370
+++ +A +F M +RG P + +Y +++ G + ++
Sbjct: 313 YCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPN 372
Query: 371 LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVG 430
+V ++++ V GL K+G++ A + V+ + +RG YN L V +
Sbjct: 373 VVTYNSL-VDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLL 431
Query: 431 KKLREVGLADLADIF 445
K++E G+ DIF
Sbjct: 432 TKIKEKGIQ--PDIF 444
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 129/278 (46%), Gaps = 7/278 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVNFF 131
N TF+ ++D K + L M ++ + D +LM V+++ K + F
Sbjct: 267 NVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLF 326
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
++M G + + ++ C+ K+V EA L ++ + I PN + Y L+ G C
Sbjct: 327 NVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKS 386
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G A ++ + M D G +I + +++ K N D+A+ + ++ K + + T
Sbjct: 387 GRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQP-DIFT 445
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y ++I+ +CK G++ A + E++ +G + T +S+I G +G E ++ +++
Sbjct: 446 YTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMK 505
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
P+ Y LI L +A ++ REMI RG
Sbjct: 506 DNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARG 543
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 94/195 (48%), Gaps = 5/195 (2%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
L + P+ + + LIKG C G++ +A + + +GF+ +I ++ +
Sbjct: 120 LKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGET 179
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
A+++ + + K + + Y +ID MCK ++ A+ + EM + I D +T SS
Sbjct: 180 KAAVQLLRRVDGKLVRP-NVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSS 238
Query: 289 IIYGLLARGRLREAY----KVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+I G G+L+ A +++ + P++ + LI G + + REA V M+K+
Sbjct: 239 LISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKN 298
Query: 345 CEPTMHTYIMLLQGH 359
+ + TY L+ G+
Sbjct: 299 VKLDVVTYNSLMDGY 313
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 10/151 (6%)
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M+D G ++ N ++ +C+ V +A L+ K+ E I+P+ Y LI G C VG
Sbjct: 399 MHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGR 458
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL---- 248
L +A K++ + +G+ P+I +I F DE + + +M D G
Sbjct: 459 LDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLS-----KMKDNGCIPNA 513
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGI 279
TY I+I + ++ + +A +L EM RG+
Sbjct: 514 ITYEILIHSLFEKDENDKAEKLLREMIARGL 544
>gi|225424178|ref|XP_002280443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial [Vitis vinifera]
Length = 531
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/415 (21%), Positives = 191/415 (46%), Gaps = 23/415 (5%)
Query: 10 RVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPC 69
++C +L S + S L+ + +++ L++ S FF++ +K Q
Sbjct: 85 KLCKLLCTHS---NSSIESLLNGASVDVSPTLVLEVLKKLSNSGVIALSFFRWAEK-QKG 140
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
F +++ +N +++ +GK + + W + +M + L+ +TF + A R++K+ V
Sbjct: 141 FKYSTENYNALIEALGKIKQFKMIWNLVNDMRSKGLLTQETFALISRRYARARKVKEAVE 200
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYC 188
F M G + L N+++ LC+ + V A+ + K+ + +P+ +Y L++G+
Sbjct: 201 TFEKMEKFGLQPVLSDFNRLLDALCKSRHVERAQEVFDKMKDRKFRPDIKSYTILLEGWG 260
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
+L+ +++ M DEGFEP +I K + D A+++F M +
Sbjct: 261 QEQNLLRLDEVYREMKDEGFEPDAVTYGILINAHCKARRYDAAVELFHKMEANKCMPTP- 319
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
Y +I+ + ++++A E G + T ++++ R+ +AY++V+E
Sbjct: 320 HIYCTLINGLGSERRLTEALQFFERSKASGFTPEAPTYNAVVGSYCQSMRMDDAYRIVDE 379
Query: 309 IEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKR-GCEPTMHTYIMLLQGHLGKR 363
+ K P Y ++ L++ RR +EA +VF+ M GCEP++ TY ++++ +
Sbjct: 380 MRKCGVGPQTRTYDIILHHLIKARRTKEAYRVFQGMSSEPGCEPSVSTYEIVVRMFCNEE 439
Query: 364 ------------GRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
KG P ++ + + L K +A KY +++ G+ P
Sbjct: 440 RVDMALRVWDEMKAKGVLPGMHMFSTLINSLCYENKLDEACKYFHEMLDMGIRPP 494
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 117/290 (40%), Gaps = 41/290 (14%)
Query: 77 FNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHIMN 135
FNR++D + KSR+++ E +M R+ D K++ I L + + L ++ + M
Sbjct: 217 FNRLLDALCKSRHVERAQEVFDKMKDRKFRPDIKSYTILLEGWGQEQNLLRLDEVYREMK 276
Query: 136 DCGCE--------------------YSLEMLNKVVKTLC----------------QRKLV 159
D G E ++E+ +K+ C +R+L
Sbjct: 277 DEGFEPDAVTYGILINAHCKARRYDAAVELFHKMEANKCMPTPHIYCTLINGLGSERRLT 336
Query: 160 VEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMI 219
++ + P Y ++ YC + +A +I + M G P D ++
Sbjct: 337 EALQFFERSKASGFTPEAPTYNAVVGSYCQSMRMDDAYRIVDEMRKCGVGPQTRTYDIIL 396
Query: 220 ETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGI 279
K + EA +VFQ M + + +STY IV+ C ++ A + +EM +G+
Sbjct: 397 HHLIKARRTKEAYRVFQGMSSEPGCEPSVSTYEIVVRMFCNEERVDMALRVWDEMKAKGV 456
Query: 280 EADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLL 325
S++I L +L EA K E+ +P +++ L + LL
Sbjct: 457 LPGMHMFSTLINSLCYENKLDEACKYFHEMLDMGIRPPAAMFSNLKQTLL 506
>gi|225427504|ref|XP_002263624.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Vitis vinifera]
Length = 709
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 103/427 (24%), Positives = 191/427 (44%), Gaps = 43/427 (10%)
Query: 21 SPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRM 80
+PES + +L LT + ++I + + FF + Q C++H +N M
Sbjct: 248 NPESDMEKALDLVGVELTTDLVIEILGKIHFEEKMAFRFFMWAGH-QDCYSHEPRAYNEM 306
Query: 81 VDIIG----KSRNIDLFWETLQEMGRRRLVNDK---TFKIALMTLAEVRELKKMVNFFHI 133
+DI+ K + + + L M R NDK ++ LM L + E K + +
Sbjct: 307 IDILSSTKYKVKQFRIVCDMLDYMKR----NDKKSVPVEVLLMILRKYTE-KHLAHLHKF 361
Query: 134 MND----CGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCD 189
+ + LN ++ LC+ LV +A+ + ++ +KP+ Y L G+C
Sbjct: 362 AKKKKIRVKTQPEINALNLLLDALCKCSLVEDAQAMFRRVKNKVKPDANTYNILFFGWCR 421
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK--RMDDLG 247
V + ++ M + G P + I++F K EA ++F+ MR K M
Sbjct: 422 VRNPSRGMRVLEEMIEMGHTPDSFTYNTAIDSFCKAGMVTEATELFEFMRTKGSTMSSPT 481
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
TY I+I + + + + + ++++M G+ D T +I G+ G++ EAYK +E
Sbjct: 482 AKTYAIMILALVQSDRTEECFKLIKDMINSGVLPDVSTYKQVIEGMCLAGKVEEAYKFLE 541
Query: 308 EIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ------ 357
E+ +PDI Y+ + L +++ EA ++ MI+ GC P++HT+ ML+
Sbjct: 542 EMGNKGYRPDIVTYNCFLDVLCENKKSEEALGLYGRMIEAGCVPSVHTFNMLISMFFEIG 601
Query: 358 ---------GHLGKRG-RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPR 407
+ KRG + D + + GL K DA ++ V+N+G+++P
Sbjct: 602 EPDGAFETWHEMDKRGCARDTDTYC----VMIEGLFNCNKMEDACFLLDEVVNKGIKLPY 657
Query: 408 FDYNKFL 414
++ FL
Sbjct: 658 RKFDCFL 664
>gi|255565671|ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536913|gb|EEF38551.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 528
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 140/299 (46%), Gaps = 42/299 (14%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMT 117
FF + ++P F H+ +N M+D+ GK RN DL W+ + M R + ++ +TF I +
Sbjct: 128 FFNWAT-SRPGFTHHPEPYNEMIDLAGKVRNFDLGWQVIDLMKARNVEISIETFSILIRR 186
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNE 177
+ V+ F+ M D C+ + ++ LC+++ EA+ L + +P+
Sbjct: 187 YVRAGLASEAVHAFNRMEDYNCKPDKIAFSILISILCRKRRATEAQSFFDSLKDKFEPDV 246
Query: 178 IAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQM 237
I Y L++G+C G++ EA +++ M G P++
Sbjct: 247 IVYTNLVRGWCRAGNIPEAERVFTEMKVAGCMPNV------------------------- 281
Query: 238 MRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
TY IVID +C+ G+I++A+ + EM G E +++T ++++ + G
Sbjct: 282 -----------YTYTIVIDALCRCGQITRAHDVFAEMLDVGCEPNSITFNNLLRVHVKAG 330
Query: 298 RLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
R + +V ++++ PD Y+ LI+ + EA +V M+K+GC P T+
Sbjct: 331 RTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNLDEALKVLNSMVKKGCSPNASTF 389
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 15/176 (8%)
Query: 198 KIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRI 253
++ +LM E SI+ +I + + EA+ F RM+D + I
Sbjct: 163 QVIDLMKARNVEISIETFSILIRRYVRAGLASEAVHAFN-----RMEDYNCKPDKIAFSI 217
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE--- 310
+I +C++ + ++A + + + K E D + ++++ G G + EA +V E++
Sbjct: 218 LISILCRKRRATEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIPEAERVFTEMKVAG 276
Query: 311 -KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
P++ Y +I L R + A VF EM+ GCEP T+ LL+ H+ K GR
Sbjct: 277 CMPNVYTYTIVIDALCRCGQITRAHDVFAEMLDVGCEPNSITFNNLLRVHV-KAGR 331
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 75/160 (46%), Gaps = 13/160 (8%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
+++T+N +++ K N+D + L M ++ N TF ++A++R++ +
Sbjct: 350 DTVTYNFLIESHCKDGNLDEALKVLNSMVKKGCSPNASTFNGLFGSIAKLRDVNGAHRLY 409
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLV-VEAKYLILKL-----SEWIKPNEIAYGWLIK 185
M + C+ N V + R V ++ ++LKL + ++PN Y LI
Sbjct: 410 AKMKELKCK-----ANTVTYNILMRMFVDTKSTDMVLKLKKEMDEDDVEPNVNTYCVLIA 464
Query: 186 GYCDVGDLIEASKIWNLMTDEG-FEPSIDVVDKMIETFFK 224
YC +G A K + M +E +PS+ V +K+++ K
Sbjct: 465 MYCGMGHWNNAYKFFREMVEEKCLKPSLPVYEKVLQQLRK 504
>gi|147782978|emb|CAN70810.1| hypothetical protein VITISV_034914 [Vitis vinifera]
Length = 708
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 103/427 (24%), Positives = 191/427 (44%), Gaps = 43/427 (10%)
Query: 21 SPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRM 80
+PES + +L LT + ++I + + FF + Q C++H +N M
Sbjct: 221 NPESDMEKALDLVGVELTTDLVIEILGKIHFEEKMAFRFFMWAGH-QDCYSHEPRAYNEM 279
Query: 81 VDIIG----KSRNIDLFWETLQEMGRRRLVNDK---TFKIALMTLAEVRELKKMVNFFHI 133
+DI+ K + + + L M R NDK ++ LM L + E K + +
Sbjct: 280 IDILSSTKYKVKQFRIVCDMLDYMKR----NDKKSVPVEVLLMILRKYTE-KHLAHLHKF 334
Query: 134 MND----CGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCD 189
+ + LN ++ LC+ LV +A+ + ++ +KP+ Y L G+C
Sbjct: 335 AKKKKIRVKTQPEINALNLLLDALCKCSLVEDAQAMFRRVKNKVKPDANTYNILFFGWCR 394
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK--RMDDLG 247
V + ++ M + G P + I++F K EA ++F+ MR K M
Sbjct: 395 VRNPSRGMRVLEEMIEMGHTPDSFTYNTAIDSFCKAGMVTEATELFEFMRTKGSTMSSPT 454
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
TY I+I + + + + + ++++M G+ D T +I G+ G++ EAYK +E
Sbjct: 455 AKTYAIMILALVQSDRTEECFKLIKDMINSGVLPDVSTYKQVIEGMCLAGKVEEAYKFLE 514
Query: 308 EIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ------ 357
E+ +PDI Y+ + L +++ EA ++ MI+ GC P++HT+ ML+
Sbjct: 515 EMGNKGYRPDIVTYNCFLDVLCENKKSEEALGLYGRMIEAGCVPSVHTFNMLISMFFEIG 574
Query: 358 ---------GHLGKRG-RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPR 407
+ KRG + D + + GL K DA ++ V+N+G+++P
Sbjct: 575 EPDGAFETWHEMDKRGCARDTDTYC----VMIEGLFNCNKMEDACFLLDEVINKGIKLPY 630
Query: 408 FDYNKFL 414
++ FL
Sbjct: 631 RKFDCFL 637
>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 512
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 154/300 (51%), Gaps = 8/300 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+ +N ++D + K + ++ ++ EM +R+ T+ + L + +LK + H
Sbjct: 210 VMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHK 269
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAK-YLILKLSEWIKPNEIAYGWLIKGYCDVGD 192
M ++ + +V C+ V EAK ++ + + +KPN + Y L+ GYC V +
Sbjct: 270 MILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNE 329
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ +A I+N M G P + MI F KI DEAMK+F+ M K++ + TY
Sbjct: 330 VNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFP-DVVTYN 388
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
+ID +CK G+IS A ++ EM RG + +T +S++ L + +A +++ +++
Sbjct: 389 SLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDH 448
Query: 311 --KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGP 368
+P + Y+ LI GL + R ++A +VF +++ G ++TY +++G K+G P
Sbjct: 449 NIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKG-FCKKGFVIP 507
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 132/287 (45%), Gaps = 18/287 (6%)
Query: 145 MLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLM 203
M N ++ +C+ KLV +A + +++ I P + Y LI G C +G L +A + + M
Sbjct: 211 MYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKM 270
Query: 204 TDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGK 263
E P++ +++ F K K EA VF +M K + + TY +++ C +
Sbjct: 271 ILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKP-NIVTYNSLMNGYCLVNE 329
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHG 319
+++A ++ M + G+ D + S +I G + EA K+ EE+ PD+ Y+
Sbjct: 330 VNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNS 389
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL----QGH--------LGKRGRKG 367
LI GL + R A ++ EM RG P + TY LL + H L K
Sbjct: 390 LIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHN 449
Query: 368 PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
P V I + GL K+G+ DA K E V+ G + + YN +
Sbjct: 450 IQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMI 496
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 136/309 (44%), Gaps = 22/309 (7%)
Query: 146 LNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
L ++K LC + + +A + K L+ + N+++Y LI G C VG A ++ +
Sbjct: 142 LTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRID 201
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
+ + + + +I+ K ++A + M KR+ + TY +I +C G++
Sbjct: 202 GKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICP-TVVTYNTLICGLCIMGQL 260
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV----VEEIEKPDISLYHGL 320
A +L +M I T S ++ G+++EA V +++ KP+I Y+ L
Sbjct: 261 KDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSL 320
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR--------------GRK 366
+ G + +A +F M + G P +H+Y +++ G + +
Sbjct: 321 MNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQI 380
Query: 367 GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMF 426
PD +V ++++ + GL K+G+ A K + + +RG YN L V
Sbjct: 381 FPD-VVTYNSL-IDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKA 438
Query: 427 EEVGKKLRE 435
E+ KL++
Sbjct: 439 IELLTKLKD 447
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 117/266 (43%), Gaps = 25/266 (9%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
L + +P+ I LIKG C GD+ +A + + GF+ + +I K+ +
Sbjct: 131 LKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQT 190
Query: 229 DEAMKVFQMMRVKRMDD----LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNL 284
A+ +M+R R+D L + Y +ID +CK ++ A+ EM + I +
Sbjct: 191 KAAL---EMLR--RIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVV 245
Query: 285 TLSSIIYGLLARGRLREA----YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREM 340
T +++I GL G+L++A +K++ E P + + L+ + + +EA VF M
Sbjct: 246 TYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVM 305
Query: 341 IKRGCEPTMHTYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKS 388
+K+ +P + TY L+ G+ + G P V+ +I + G K
Sbjct: 306 MKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMV 365
Query: 389 LDAAKYVERVMNRGVEVPRFDYNKFL 414
+A K E + + + YN +
Sbjct: 366 DEAMKLFEEMHCKQIFPDVVTYNSLI 391
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/283 (20%), Positives = 120/283 (42%), Gaps = 21/283 (7%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+ I +G ++ + M G ++ + +I F ++ + + V
Sbjct: 67 PSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSV 126
Query: 235 FQMMRVK--RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
F + K D + L+T +I +C +G I +A +++ G + + ++ ++I G
Sbjct: 127 FSNILKKGYEPDAITLTT---LIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLING 183
Query: 293 LLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
L G+ + A +++ I+ + D+ +Y+ +I G+ + + +A + EM+ + PT
Sbjct: 184 LCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPT 243
Query: 349 MHTYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVE 396
+ TY L+ G L K + +P V +I V K GK +A
Sbjct: 244 VVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFV 303
Query: 397 RVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLA 439
+M + V+ YN ++ Y V E + + ++G+A
Sbjct: 304 VMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVA 346
>gi|297834384|ref|XP_002885074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330914|gb|EFH61333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 517
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 191/420 (45%), Gaps = 27/420 (6%)
Query: 9 VRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQP 68
V V I+ + S + L C LT E ++ N W+P Y+ + K
Sbjct: 73 VDVHNIIKHHRGSSPEEIERILDKCGIQLTEELVFEVVNRNRSDWKPAYILSRLIVK-HS 131
Query: 69 CFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRR-LVNDKTFKIALMTLAEVRELKKM 127
+ +S+ +N ++D++GK R + F + + EM +R V++KT+++ L A ++ +
Sbjct: 132 VYISSSLVYNEILDVLGKMRRFEEFHQVVDEMSKRDGFVDEKTYEVLLNRYAAAHKVDEA 191
Query: 128 VNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGY 187
V F + G E L + ++ LC+ K V A+ L + ++ G+
Sbjct: 192 VGVFERRREFGIEDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIRTMNIILNGW 251
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM-RVKRMDDL 246
C +G++ EA +IW + +P + MI K K +AM++++ + R D+
Sbjct: 252 CVLGNVHEAKRIWKDIIASKCKPDVVSYGTMINALTKKGKLGKAMELYRALWETGRNPDV 311
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
+ VID +C + +I +A + +EM ++G + +T +S++ L R + +++V
Sbjct: 312 KICNN--VIDALCFKKRIPEALEVFKEMSEKGPSPNVVTYNSLLKHLCKIRRTEKVWELV 369
Query: 307 EEIE------KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL 360
EE+E P+ + L+K +R+++ V M K CE T Y ++ + ++
Sbjct: 370 EEMEHKGGSCSPNDVTFGYLLK---YSQRSKDVDAVLERMAKNKCEMTSDLYNLMFRLYV 426
Query: 361 ------------GKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG-VEVPR 407
G+ R G P TI + GL GK +A Y + +M++G V PR
Sbjct: 427 QWDNEEKVREIWGEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPR 486
>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 152/315 (48%), Gaps = 18/315 (5%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIM 134
+N +++ + K D +EMG + L ND T+ I + + +L ++F M
Sbjct: 368 VYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKM 427
Query: 135 NDCGCEYSLEMLNKVVKTLCQ-RKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDL 193
G + ++ N ++ C+ L + + + +KP ++Y LI GYC+ G L
Sbjct: 428 IMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKL 487
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
EA ++++ MT +G P+ +I F+ N+ +A ++F M + M TY +
Sbjct: 488 HEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMP-NEVTYNV 546
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPD 313
+I+ CK G +A+ +L +M ++G+ D T +I L + GR+ EA K ++++ +
Sbjct: 547 MIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREH 606
Query: 314 ISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPD 369
L Y L+ G + R R+A V REM+KRG + + Y +L+ G + ++
Sbjct: 607 FKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQ------ 660
Query: 370 PLVNFDTIFVGGLVK 384
DT V GL+K
Sbjct: 661 -----DTSAVFGLLK 670
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 171/383 (44%), Gaps = 25/383 (6%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALM-TLAEVRELKKMVNFFHIM 134
T +++ + K R +D+ E+ + D +A++ + E++ K M
Sbjct: 195 TLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRM 254
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDL 193
+ ++ + N ++ LC+ K V EA + L + + +E+ Y L+ G C V +
Sbjct: 255 ESS--DLNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEF 312
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL-GLSTYR 252
+ + + M + GF P+ + ++E + K +A + RVK++ + L Y
Sbjct: 313 EVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVN--RVKKVGAMPSLFVYN 370
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP 312
+I+ +CK GK +A + +EM ++G+ A+++T S +I RG+L A + ++
Sbjct: 371 ALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMA 430
Query: 313 DISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR--- 365
I + Y+ LI G +L A F EMI +G +PT+ +Y L+ G+ K G+
Sbjct: 431 GIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNK-GKLHE 489
Query: 366 ----------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
KG P T + L +A + DA + + ++ + + YN +
Sbjct: 490 AFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIE 549
Query: 416 YYSNEEGVVMFEEVGKKLREVGL 438
+ E V E+ ++ + GL
Sbjct: 550 GHCKEGNTVKAFELLNQMVQKGL 572
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 98/223 (43%), Gaps = 37/223 (16%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
++P+++ Y +I GY G + +A IW++M DEG P+I +I K D+A
Sbjct: 677 LRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAE 736
Query: 233 KVFQMMRVKR-----------MDDLG----------------------LSTYRIVIDWMC 259
+++ M V +D L +Y I++ C
Sbjct: 737 LLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLKGLLANTVSYNILVRGFC 796
Query: 260 KRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK----VVEEIEKPDIS 315
K G++ +A +L+EM I D +T S+IIY RG L A + ++ + KPD
Sbjct: 797 KLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTL 856
Query: 316 LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
Y+ LI G +A ++ +MI+RG +P T+ L G
Sbjct: 857 AYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLSHG 899
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 128/312 (41%), Gaps = 56/312 (17%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSI---------------- 212
L + + PNE+ Y +I+G+C G+ ++A ++ N M +G P
Sbjct: 533 LEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRV 592
Query: 213 ----DVVDKMIETFFKIN---------------KDDEAMKVFQMMRVKRMDDLGLSTYRI 253
+D + FK+N + +A+ V + M VKR D+ L Y +
Sbjct: 593 CEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREM-VKRGVDMDLVCYAV 651
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV----VEEI 309
+ID K S + +L+ M + + D + +S+I G G +++A+ + ++E
Sbjct: 652 LIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEG 711
Query: 310 EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPD 369
P+I Y LI L + +A +++EM+ P TY L HL + G
Sbjct: 712 CTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLD-HLAREGSMEKA 770
Query: 370 PLVNFD------------TIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
++ D I V G K G+ +A K ++ +++ + Y+ ++
Sbjct: 771 VQLHNDMLKGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQC 830
Query: 418 ---SNEEGVVMF 426
N +G + F
Sbjct: 831 CRRGNLDGAIEF 842
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 117/258 (45%), Gaps = 8/258 (3%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVNFFHI 133
+ + ++D K ++ + L+ M +RL DK +++ ++ +KK + I
Sbjct: 647 VCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDI 706
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGD 192
M D GC ++ ++ LC+ L+ +A+ L + L PN + Y + G
Sbjct: 707 MIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGS 766
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ +A ++ N M +G + + ++ F K+ + +EA K+ M + TY
Sbjct: 767 MEKAVQLHNDML-KGLLANTVSYNILVRGFCKLGRVEEATKLLDEM-IDNAIFPDCITYS 824
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI--- 309
+I C+RG + A + M +G++ D L + +IYG G L +A+++ +++
Sbjct: 825 TIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRR 884
Query: 310 -EKPDISLYHGLIKGLLR 326
KP+ + + L G R
Sbjct: 885 GVKPNQATHKSLSHGASR 902
>gi|125541207|gb|EAY87602.1| hypothetical protein OsI_09013 [Oryza sativa Indica Group]
Length = 555
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 105/415 (25%), Positives = 182/415 (43%), Gaps = 38/415 (9%)
Query: 28 SSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIG-- 85
++L + LT + + + + FF + Q + H + T+N ++DI+
Sbjct: 101 AALDALGAELTTPLVADVLHRLRYDEKLAFRFFVWASH-QGGYEHEAATYNDVIDILSGT 159
Query: 86 --KSRNIDLFWETLQEMGRRRL----VNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGC 139
K+R + + L M RRR V+D + T + L+K+ +
Sbjct: 160 RYKARQFGVLCDVLDHMKRRRTRSVPVDDLLGILRAYTEKHLTHLRKLAKKRRVRMRTPP 219
Query: 140 EYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKI 199
E + LN ++ C+ +V EA+ + ++ + N Y L G+C D A K+
Sbjct: 220 E--TDALNVLLDAFCKSGMVREAEAVFSRVKRKLLGNAETYSILFFGWCRARDPKRAMKV 277
Query: 200 WNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK--RMDDLGLSTYRIVIDW 257
M P + I++F EA +F+ MR + + TY I+I
Sbjct: 278 LEEMIQMKHTPENFTYNAAIDSFCSAGLVSEARDLFEFMRTEGSTISSPTAKTYSIMIAA 337
Query: 258 MCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PD 313
+ K G++ + + ++ EM K G D T +I G+L +L AY V++E+ K PD
Sbjct: 338 LAKAGQMEECFELISEMRKCGCMPDVSTYKDLIEGMLLVDKLDAAYCVLDEMAKAGFPPD 397
Query: 314 ISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVN 373
I Y+ +K L L++A +A ++ MI+ CEP++HTY ML+ R PD +N
Sbjct: 398 IVTYNCFLKVLCGLQKADDALELCERMIEAHCEPSVHTYNMLMVMFFEMR---EPDRAIN 454
Query: 374 F-------------DT--IFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
DT + GL +G++ DA ++ V+NRG+ + Y KF
Sbjct: 455 IWIEMDKRGCHRAVDTYETMIDGLFDSGRTEDATTLLDEVINRGM---KLSYKKF 506
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 110/249 (44%), Gaps = 18/249 (7%)
Query: 74 SITFNRMVD------IIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKM 127
+ T+N +D ++ ++R DLF E KT+ I + LA+ ++++
Sbjct: 290 NFTYNAAIDSFCSAGLVSEAR--DLFEFMRTEGSTISSPTAKTYSIMIAALAKAGQMEEC 347
Query: 128 VNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVE---AKYLILK--LSEWIKPNEIAYGW 182
M CGC + K L + L+V+ A Y +L P+ + Y
Sbjct: 348 FELISEMRKCGCMPDV----STYKDLIEGMLLVDKLDAAYCVLDEMAKAGFPPDIVTYNC 403
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
+K C + +A ++ M + EPS+ + ++ FF++ + D A+ ++ M KR
Sbjct: 404 FLKVLCGLQKADDALELCERMIEAHCEPSVHTYNMLMVMFFEMREPDRAINIWIEMD-KR 462
Query: 243 MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
+ TY +ID + G+ A T+L+E+ RG++ +I+ L A G L
Sbjct: 463 GCHRAVDTYETMIDGLFDSGRTEDATTLLDEVINRGMKLSYKKFDAIMLRLSAVGNLGAI 522
Query: 303 YKVVEEIEK 311
+++ E + +
Sbjct: 523 HRLSEHMRR 531
>gi|449469288|ref|XP_004152353.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 182/405 (44%), Gaps = 48/405 (11%)
Query: 2 PVDPGHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQI---CNNFPLSWRPVYL 58
P P + + IL ++ +P L LSS + N++ + Q+ C N S +
Sbjct: 45 PTLPFLVSEISRILSDRR-NPHHDLEVGLSSFSSNVSTDLVEQVLKRCKNIAFS---AHR 100
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEM--GRRRLVNDKTFKIALM 116
FF + ++ P F + +++ +VDI+G S + W+ L E+ R ++ + F
Sbjct: 101 FFLWAKRI-PGFEPSDDSYHIVVDILGSSGQFAILWDFLIEIRETRSSVITHELFWHVFT 159
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPN 176
+ + + F+ M + G ++ L+K++ TLC+RK V A+ K+ P+
Sbjct: 160 AYSRADLPQDAIRAFNRMGEFGIRAGVDDLDKLLYTLCKRKHVAHAQQFFDKVKSVFNPS 219
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
Y L +G+ VGD A K+++ M + G + + ++E K K DEA K+F
Sbjct: 220 VKTYSILTRGWGVVGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMFL 279
Query: 237 MM---------------------------------RVKRMDDL-GLSTYRIVIDWMCKRG 262
M R KR + L + TY VI +CK
Sbjct: 280 EMDSNGVDPDADTYSIFIRSSCQENDLHTVYRVLERTKRKNLLPNVFTYNCVIKKLCKDQ 339
Query: 263 KISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYH 318
+ +AY +L+EM +RG+ D + ++I + A +V+ +++ PD Y+
Sbjct: 340 NVEEAYQILDEMIERGVTPDTWSYNAIQAYHCDHSEVNSALNLVKRMDRDKCVPDKHTYN 399
Query: 319 GLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
++K L+R+ R A +V+ M KRG P++ TY +++ G K+
Sbjct: 400 MVLKLLVRVGRFDRANEVWESMGKRGFYPSVSTYAVMIHGFCKKK 444
>gi|227463004|gb|ACP39954.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463006|gb|ACP39955.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 547
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 95/416 (22%), Positives = 193/416 (46%), Gaps = 23/416 (5%)
Query: 9 VRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQP 68
R+CT+L S +L L + ++ +++ + FF + +K Q
Sbjct: 96 ARICTLLSTHSGSHADKL---LEDASIKVSPSLVVEVLKRLSNAGVIALSFFTWAEK-QK 151
Query: 69 CFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMV 128
F +N+ ++N +++ +GK + L + EM R+L+N TF + A R++++ +
Sbjct: 152 GFKYNTESYNALIEALGKIKQFKLIRSLVNEMKSRKLLNKDTFALISRRHARARKVEEAI 211
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGY 187
F M + G + N+++ TLC+ + V +A + K+ + P+ +Y L++G+
Sbjct: 212 EAFERMEEFGFKLETSDFNRLLDTLCKSRHVEKANKVFDKMKKRRFVPDIKSYTILLEGW 271
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
+L+ +++ M +GFEP + +I + K K D A+++F M K
Sbjct: 272 GKEHNLLRLDEVYLEMKYDGFEPDVVTYGILISAYCKAKKYDAAIELFHEMEAKNCKPTP 331
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
Y +I+ + ++S+A E G + T +S++ R+ +A++V++
Sbjct: 332 -HVYCTLINGLGSEKRLSEALEFFERFKSCGFTPEAPTYNSLVGAYCWSMRIDDAFQVID 390
Query: 308 EIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKR-GCEPTMHTYIMLLQG---- 358
E+ K P+ Y ++ L++ RR EA F++M GCEPT+ TY ++++
Sbjct: 391 EMRKHSAGPNSRTYDIILHHLIKARRTNEAYFRFQKMSNEPGCEPTVSTYEIIVRMFCNE 450
Query: 359 ---HLGKR-----GRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
L K+ KG P ++ + + L K +A KY + +++ G+ P
Sbjct: 451 DRVDLAKQVWDQMKAKGVLPGMHMYSDLITSLCHKNKLGEACKYFQEMLDAGIRPP 506
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 78/179 (43%), Gaps = 4/179 (2%)
Query: 60 FQYTQKAQPC-FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMT 117
++ ++ + C F + T+N +V S ID ++ + EM + N +T+ I L
Sbjct: 351 LEFFERFKSCGFTPEAPTYNSLVGAYCWSMRIDDAFQVIDEMRKHSAGPNSRTYDIILHH 410
Query: 118 LAEVRELKKMVNFFHIM-NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKP 175
L + R + F M N+ GCE ++ +V+ C V AK + ++ ++ + P
Sbjct: 411 LIKARRTNEAYFRFQKMSNEPGCEPTVSTYEIIVRMFCNEDRVDLAKQVWDQMKAKGVLP 470
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
Y LI C L EA K + M D G P + + + K+DEA+ +
Sbjct: 471 GMHMYSDLITSLCHKNKLGEACKYFQEMLDAGIRPPAKMFSNLKQALLDEGKNDEALNL 529
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 183/395 (46%), Gaps = 32/395 (8%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRR----RLVNDKTFKIALMTLAEVRELKKMVNFF 131
T+N +++ K + E + M + +V T L +V E +M+ F
Sbjct: 80 TYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEML--F 137
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
H M + GC + N ++ LC+ + + A L+ ++ S+ P+ I Y ++ G C +
Sbjct: 138 HKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRM 197
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR-MDDLGLS 249
G + EA + ++ M G+ P + + +++ +K K DEAMK+F+ + K M D
Sbjct: 198 GKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDT--V 255
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
TY ++ + ++ + +A M ++M G + T S ++ G ++ +A+KV+EE+
Sbjct: 256 TYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEM 315
Query: 310 EK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
K PD+ Y+ L+ GL + +A ++F M+ GC P + +Y ++L G +
Sbjct: 316 SKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLC--KTN 373
Query: 366 KGPDPLVNFD--------------TIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
K D V FD I + GL KAGK +A ++++ G YN
Sbjct: 374 KVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYN 433
Query: 412 KFLHYYSNEEGVVMFEEVGKKLREVGLADLADIFQ 446
++ + + + + + ++E G L+D F+
Sbjct: 434 TLMNGLRKQGRHIQADRLTQAMKEKGF--LSDCFK 466
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 146/325 (44%), Gaps = 17/325 (5%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
N TF++ L + + +L+ F M D G N ++ ++ V EA L
Sbjct: 7 NRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLY 66
Query: 167 LKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI 225
++ S ++P+ Y L+ +C + EA +++ M ++GFEP + +I K
Sbjct: 67 EEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKT 126
Query: 226 NKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
K EA+++ ++R Y +I+ +CK I +AY +LEEM +G DN+T
Sbjct: 127 GKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNIT 186
Query: 286 LSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMI 341
++I+ GL G++ EA + + + PD+ Y+GL+ L + + EA ++F+++I
Sbjct: 187 YNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVI 246
Query: 342 KRGCEPTMHTYIMLLQGHLGKRG------------RKGPDPLVNFDTIFVGGLVKAGKSL 389
+G P TY +L G K G P +I + G +A K
Sbjct: 247 AKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVD 306
Query: 390 DAAKYVERVMNRGVEVPRFDYNKFL 414
DA K +E + G YN L
Sbjct: 307 DAHKVLEEMSKIGAVPDVVTYNILL 331
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 127/305 (41%), Gaps = 64/305 (20%)
Query: 175 PNEIAYGWLIKGYCDVGDL-----------------------------------IEASKI 199
PN + ++K +C G L EA+++
Sbjct: 6 PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65
Query: 200 WNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMC 259
+ M G EPSI + ++ F K K EAM++F+ M K + + TY +I +C
Sbjct: 66 YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEP-DVVTYSTIISGLC 124
Query: 260 KRGKISQAYTML-EEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDI 314
K GK+++A ML +M +RG A+ + +++I GL + AYK++EE+ PD
Sbjct: 125 KTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDN 184
Query: 315 SLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNF 374
Y+ ++ GL R+ + EA Q F M RG P + Y LL
Sbjct: 185 ITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLD----------------- 227
Query: 375 DTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLR 434
L K GK+ +A K + V+ +G YN L + + + EE+ KK+
Sbjct: 228 ------ALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMV 281
Query: 435 EVGLA 439
G A
Sbjct: 282 ASGCA 286
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 141/302 (46%), Gaps = 10/302 (3%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVN 129
+ N++ +N +++ + K NI+ ++ L+EM + V D T+ L L + ++ +
Sbjct: 146 SANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQ 205
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYC 188
FF M G + N ++ L + EA L +++ P+ + Y ++ G
Sbjct: 206 FFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLA 265
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLG 247
++ EA +++ M G P+ ++ + K D+A KV +M ++ + D
Sbjct: 266 RKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPD-- 323
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY---- 303
+ TY I++D +CK + +A+ + M G D ++ S ++ GL ++ +A
Sbjct: 324 VVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFD 383
Query: 304 KVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
+++E PD+ ++ L+ GL + + EA + +M GC P Y L+ G L K+
Sbjct: 384 RMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNG-LRKQ 442
Query: 364 GR 365
GR
Sbjct: 443 GR 444
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 122/245 (49%), Gaps = 5/245 (2%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMV 128
++ + + +N ++D + K D + +++ + + D T+ L+ LA + +
Sbjct: 215 YSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAE 274
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGY 187
F M GC + + V+ C+ K V +A ++ ++S+ P+ + Y L+ G
Sbjct: 275 EMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGL 334
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDL 246
C + +A ++++ M D G P I ++ K NK +A +F +M+ K + D+
Sbjct: 335 CKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDV 394
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
T+ I++D +CK GK+ +A +L++M G D + ++++ GL +GR +A ++
Sbjct: 395 --VTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLT 452
Query: 307 EEIEK 311
+ +++
Sbjct: 453 QAMKE 457
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 76/165 (46%), Gaps = 19/165 (11%)
Query: 277 RGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRARE 332
R + T ++ +G+LR+ YK+ E++ PD Y+ LI G + R E
Sbjct: 2 RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61
Query: 333 ATQVFREMIKRGCEPTMHTYIMLLQGHLGKR------------GRKGPDP-LVNFDTIFV 379
A +++ EM+ G EP+++TY LL + KG +P +V + TI +
Sbjct: 62 ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTI-I 120
Query: 380 GGLVKAGKSLDAAKYV-ERVMNRGVEVPRFDYNKFLHYYSNEEGV 423
GL K GK +A + + +++ RG YN ++ +E +
Sbjct: 121 SGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENI 165
>gi|449484422|ref|XP_004156879.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 182/405 (44%), Gaps = 48/405 (11%)
Query: 2 PVDPGHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQI---CNNFPLSWRPVYL 58
P P + + IL ++ +P L LSS + N++ + Q+ C N S +
Sbjct: 45 PTLPFLVSEISRILSDRR-NPHHDLEVGLSSFSSNVSTDLVEQVLKRCKNIAFS---AHR 100
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEM--GRRRLVNDKTFKIALM 116
FF + ++ P F + +++ +VDI+G S + W+ L E+ R ++ + F
Sbjct: 101 FFLWAKRI-PGFEPSDDSYHIVVDILGGSGQFAILWDFLIEIRETRSSVITHELFWHVFT 159
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPN 176
+ + + F+ M + G ++ L+K++ TLC+RK V A+ K+ P+
Sbjct: 160 AYSRADLPQDAIRAFNRMGEFGIRAGVDDLDKLLYTLCKRKHVAHAQQFFDKVKSVFNPS 219
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
Y L +G+ VGD A K+++ M + G + + ++E K K DEA K+F
Sbjct: 220 VKTYSILTRGWGVVGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMFL 279
Query: 237 MM---------------------------------RVKRMDDL-GLSTYRIVIDWMCKRG 262
M R KR + L + TY VI +CK
Sbjct: 280 EMDSNGVDPDADTYSIFIRSSCQENDLHTVYRVLERTKRKNLLPNVFTYNCVIKKLCKDQ 339
Query: 263 KISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYH 318
+ +AY +L+EM +RG+ D + ++I + A +V+ +++ PD Y+
Sbjct: 340 NVEEAYQILDEMIERGVTPDTWSYNAIQAYHCDHSEVNSALNLVKRMDRDKCVPDKHTYN 399
Query: 319 GLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
++K L+R+ R A +V+ M KRG P++ TY +++ G K+
Sbjct: 400 MVLKLLVRVGRFDRANEVWESMGKRGFYPSVSTYAVMIHGFCKKK 444
>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
Length = 1037
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 122/512 (23%), Positives = 208/512 (40%), Gaps = 84/512 (16%)
Query: 2 PVDPGHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQ 61
P P + R+C ++ ++ + S+L NF + + + N L+ FFQ
Sbjct: 38 PAPPELVSRICRLVLLRRCNAISKL-------NFVFSDDIVDAVLRNLRLNPTASLGFFQ 90
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNID--------------------LFWETLQEMG 101
+ K Q F N ++ ++V I+ + R D + W+ L +
Sbjct: 91 FVSKQQN-FRPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWDELVGVY 149
Query: 102 RRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSL----EMLNKVVK------ 151
R + F + L E K + F M CG SL +LN +VK
Sbjct: 150 REFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHT 209
Query: 152 -------------------------TLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIK 185
C+ V EA + K+ ++PN + Y LI
Sbjct: 210 AHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLIN 269
Query: 186 GYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD 245
GY +GD+ A + M+++G ++ +I+ + K K DEA KV + M+ +
Sbjct: 270 GYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALV 329
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
Y ++ID C+ GKI A +L+EM + G++ + +S+I G RG + EA V
Sbjct: 330 PDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGV 389
Query: 306 VEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG--- 358
+ + KPD Y+ L+ G R EA + +M++ G EPT+ TY LL+G
Sbjct: 390 ITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCR 449
Query: 359 -----------HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPR 407
HL + PD V + T+ + GL K A+ + ++ RG R
Sbjct: 450 VGAFDDALQIWHLMMKXGVAPDE-VGYSTL-LDGLFKMENFEGASTLWKDILARGFTKSR 507
Query: 408 FDYNKFLHYYSNEEGVVMFEEVGKKLREVGLA 439
+N + +V EE+ K++++G +
Sbjct: 508 ITFNTMISGLCKMGKMVEAEEIFDKMKDLGCS 539
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 124/260 (47%), Gaps = 39/260 (15%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEA 196
G + +L + N ++ C+R + EA+ +I ++ +W +KP+ +Y L+ GYC G EA
Sbjct: 362 GLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEA 421
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM--DDLGLS----- 249
+ + M EG EP++ + +++ ++ D+A++++ +M + D++G S
Sbjct: 422 FNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDG 481
Query: 250 ---------------------------TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEAD 282
T+ +I +CK GK+ +A + ++M G D
Sbjct: 482 LFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPD 541
Query: 283 NLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFR 338
+T ++I G + +A+KV +E+ P I +Y+ LI GL + RR E T +
Sbjct: 542 GITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLT 601
Query: 339 EMIKRGCEPTMHTYIMLLQG 358
EM RG P + TY L+ G
Sbjct: 602 EMGIRGLTPNIVTYGALIDG 621
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 166/392 (42%), Gaps = 53/392 (13%)
Query: 70 FAHNSITFNRMVDII---GKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKK 126
F + ITFN M+ + GK + ++ ++++G + T++ + + + +
Sbjct: 503 FTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSP--DGITYRTLIDGYCKASNVGQ 560
Query: 127 MVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIK 185
M S+EM N ++ L + + +VE L+ ++ + PN + YG LI
Sbjct: 561 AFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALID 620
Query: 186 GYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR------ 239
G+C G L +A + MT+ G +I + M+ +++ + DEA + Q M
Sbjct: 621 GWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFP 680
Query: 240 ---------------VKRMDDLGLS----------TYRIVIDWMCKRGKISQAYTMLEEM 274
K D L S Y I I +CK GK+ A +
Sbjct: 681 DHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSML 740
Query: 275 FKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRA 330
+G DN T ++I+G A G + EA+++ +E+ + P+I Y+ LI GL +
Sbjct: 741 SLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENV 800
Query: 331 REATQVFREMIKRGCEPTMHTYIMLLQGHL------------GKRGRKGPDPLVNFDTIF 378
A ++F ++ ++G P + TY L+ G+ K +G P V +
Sbjct: 801 DRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSAL 860
Query: 379 VGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY 410
+ GL K G + K + +++ GV+ +Y
Sbjct: 861 INGLCKHGDIERSMKLLNQMIKAGVDSKLIEY 892
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 128/283 (45%), Gaps = 32/283 (11%)
Query: 146 LNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
N ++ LC+ +VEA+ + K+ + P+ I Y LI GYC ++ +A K+ M
Sbjct: 510 FNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAME 569
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
E PSI++ + +I FK + E + M ++ + + TY +ID CK G +
Sbjct: 570 REXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTP-NIVTYGALIDGWCKEGML 628
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA----YKVVEEIEKPDISLYHGL 320
+A++ EM + G+ A+ + S+++ GL GR+ EA K+V+ PD +
Sbjct: 629 DKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPD---HECF 685
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVG 380
+K +R A Q + + C+ T+++ P+ +V I +
Sbjct: 686 LKSDIRY----AAIQKIADSLDESCK----TFLL-------------PNNIVY--NIAIA 722
Query: 381 GLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGV 423
GL K GK DA ++ + +G F Y +H YS V
Sbjct: 723 GLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNV 765
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 94/191 (49%), Gaps = 5/191 (2%)
Query: 172 WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEA 231
++ PN I Y I G C G + +A + +++++ +GF P +I + DEA
Sbjct: 709 FLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEA 768
Query: 232 MKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
++ M ++R + TY +I+ +CK + +A + ++ ++G+ + +T +++I
Sbjct: 769 FRLRDEM-LRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLID 827
Query: 292 GLLARGRLREAYKV----VEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
G G + A+K+ +EE P + Y LI GL + + ++ +MIK G +
Sbjct: 828 GYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDS 887
Query: 348 TMHTYIMLLQG 358
+ Y L+QG
Sbjct: 888 KLIEYCTLVQG 898
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 73/166 (43%), Gaps = 2/166 (1%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMV 128
F ++ T+ ++ + N+D + EM RR LV N T+ + L + + +
Sbjct: 745 FVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQ 804
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGY 187
FH ++ G ++ N ++ C+ + A L K+ E I P+ + Y LI G
Sbjct: 805 RLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGL 864
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
C GD+ + K+ N M G + + +++ FK + +E K
Sbjct: 865 CKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGGFKTSNYNEMSK 910
>gi|297841875|ref|XP_002888819.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334660|gb|EFH65078.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 512
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/414 (21%), Positives = 195/414 (47%), Gaps = 25/414 (6%)
Query: 10 RVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPC 69
++C IL + +S++ + L+ + L+ ++ + F++ + Q
Sbjct: 70 KICKILSK---FTDSKVETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAEN-QKG 125
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
F H + +N +++ +GK + L W + +M +++L++ TF + A R++K+ +
Sbjct: 126 FKHTTSNYNALIESLGKIKQFKLIWNLVDDMKQKKLLSKDTFALISRRYARARKVKEAIT 185
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYC 188
FH M D G + N+++ L + + V +A+ + K+ + +P+ +Y L++G+
Sbjct: 186 AFHKMEDYGFKMESSDFNRMLDILSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWG 245
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
+L+ ++++ M DEGFEP + +I + K K DEA++ F M +R
Sbjct: 246 QELNLLRVNEVYGEMKDEGFEPDVVAYGIIINAYCKAKKYDEAVRFFNEME-QRNCKPSP 304
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
+ +I+ + K++ A E G + T ++++ R+ +A+K V+E
Sbjct: 305 HIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAFKTVDE 364
Query: 309 IEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR- 363
+ P+ Y ++ L+R++R +EA +V+++M CEPT+ TY ++++ K
Sbjct: 365 MRSKGIGPNARTYDIILHHLIRMQRTKEAYEVYQKM---SCEPTVSTYEIMVRMFCNKER 421
Query: 364 -----------GRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
KG P ++ + + L K +A +Y +++ G+ P
Sbjct: 422 LDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPP 475
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 135/308 (43%), Gaps = 34/308 (11%)
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGD 192
++N+ + S ++ +V+K L ++ + + + + K Y LI+ +G
Sbjct: 86 LLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIES---LGK 142
Query: 193 LIEASKIWNLMTDEGFEP--SIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL-- 248
+ + IWNL+ D + S D + + + K EA+ F +M+D G
Sbjct: 143 IKQFKLIWNLVDDMKQKKLLSKDTFALISRRYARARKVKEAITAFH-----KMEDYGFKM 197
Query: 249 --STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL---LARGRLREAY 303
S + ++D + K + A + ++M K+ E D + + ++ G L R+ E Y
Sbjct: 198 ESSDFNRMLDILSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVNEVY 257
Query: 304 -KVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
++ +E +PD+ Y +I + ++ EA + F EM +R C+P+ H + L+ G LG
Sbjct: 258 GEMKDEGFEPDVVAYGIIINAYCKAKKYDEAVRFFNEMEQRNCKPSPHIFCSLING-LGS 316
Query: 363 RGRKGPDPLVNFD--------------TIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRF 408
+K D L F+ VG + + DA K V+ + ++G+
Sbjct: 317 E-KKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAFKTVDEMRSKGIGPNAR 375
Query: 409 DYNKFLHY 416
Y+ LH+
Sbjct: 376 TYDIILHH 383
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 151/292 (51%), Gaps = 7/292 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVNFF 131
N + +N ++D + K + ++ ++ EM + + D AL++ V ++K + F
Sbjct: 211 NVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLF 270
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAK-YLILKLSEWIKPNEIAYGWLIKGYCDV 190
+ M ++ N +V C+ + + EAK L + + + IKP+ Y L+ YC V
Sbjct: 271 NKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLV 330
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
++ +A I+N ++ G P+I MI F KI K DEAM +F+ M + + T
Sbjct: 331 KEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIP-DVVT 389
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y +ID +CK GKIS A +++EM RG+ D +T +SI+ L ++ +A ++ +++
Sbjct: 390 YNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMK 449
Query: 311 ----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+PDI Y L+ GL + R +A VF +++ +G ++ Y ++QG
Sbjct: 450 DEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQG 501
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 138/296 (46%), Gaps = 22/296 (7%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEA 196
G E ++ L ++K LC + + +A K+ N+++YG LI G C VG A
Sbjct: 137 GYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAA 196
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVID 256
++ + + +P++ + + +I++ K+ +EA ++ M K + + TY +I
Sbjct: 197 LQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISP-DVVTYNALIS 255
Query: 257 WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KP 312
C GK+ A + +M I + T + ++ G RL+EA V+ + KP
Sbjct: 256 GFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKP 315
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG-----------HLG 361
D+ Y+ L+ ++ +A +F + +RG P +H+Y +++ G +L
Sbjct: 316 DVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLF 375
Query: 362 KRGRKG---PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
K PD +V ++++ + GL K GK A K V+ + +RGV + YN L
Sbjct: 376 KEMHCNNIIPD-VVTYNSL-IDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSIL 429
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 130/278 (46%), Gaps = 7/278 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N TFN +VD K R + L M ++ + D T+ + V+E+ K + F
Sbjct: 281 NVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIF 340
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
+ ++ G ++ + ++ C+ K V EA L ++ I P+ + Y LI G C +
Sbjct: 341 NTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKL 400
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G + A K+ + M D G + +++ K ++ D+A+ + M+ + + + T
Sbjct: 401 GKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQP-DICT 459
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y ++D +CK G++ A + E++ +G D +++I G + G E+ ++ ++E
Sbjct: 460 YTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKME 519
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+ P+ Y +I L +A ++ REMI RG
Sbjct: 520 ENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRG 557
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 104/275 (37%), Gaps = 57/275 (20%)
Query: 143 LEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNL 202
L +L L Q L ILK+ +PN I LIKG C G + +A + +
Sbjct: 110 LSILINCFSQLGQNPLSFSVLAKILKMG--YEPNVITLTTLIKGLCLKGQIHQALQFHDK 167
Query: 203 MTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRG 262
+ GF + +I K+ + A+++ + + K + + Y +ID MCK
Sbjct: 168 VVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQP-NVVMYNTIIDSMCKVK 226
Query: 263 KISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISLYHGLIK 322
+++A+ + EM +GI PD+ Y+ LI
Sbjct: 227 LVNEAFDLYSEMVSKGIS-------------------------------PDVVTYNALIS 255
Query: 323 GLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGL 382
G + + ++AT +F +MI P ++T+ I V G
Sbjct: 256 GFCIVGKMKDATDLFNKMIFENINPNVYTF-----------------------NILVDGF 292
Query: 383 VKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
K + +A + +M +G++ F YN + Y
Sbjct: 293 CKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRY 327
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 97/210 (46%), Gaps = 11/210 (5%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIM 134
+++ M+ K + +D +EM ++ D T+ + L ++ ++ + M
Sbjct: 354 SYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEM 413
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDL 193
+D G + N ++ LC+ V +A L+ K+ E I+P+ Y L+ G C G L
Sbjct: 414 HDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRL 473
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL----S 249
+A ++ + +G+ +++ MI+ F DE++ + + +M++ G
Sbjct: 474 EDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDL-----LSKMEENGCIPNAV 528
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGI 279
TY I+I + + + +A +L EM RG+
Sbjct: 529 TYEIIICSLFDKDENDKAEKLLREMITRGL 558
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/419 (22%), Positives = 196/419 (46%), Gaps = 63/419 (15%)
Query: 73 NSITFNRMVD-IIGKSRNIDL--FWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
N +TF+ +++ + K++ ID ++ + +MG V T+ + L ++ +
Sbjct: 46 NHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDV--ITYSTIINGLCKMGSTTMAIQ 103
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYC 188
M + GC+ ++ + + ++ +LC+ KL+ EA ++L ++ I PN + Y ++ G+C
Sbjct: 104 LLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFC 163
Query: 189 DVGD-----------------------------------LIEASKIWNLMTDEGFEPSID 213
++G ++EA ++ M ++G EP+++
Sbjct: 164 NLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVN 223
Query: 214 VVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEE 273
+ +++ + ++ DEA K+F +M V++ + +Y I+I CK G+I +A +L E
Sbjct: 224 TYNALMDGYCSQSQMDEAQKLFNIM-VRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAE 282
Query: 274 MFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRR 329
M + + D +T S+++ G GR ++A K++EE+ PD+ Y ++ GL +
Sbjct: 283 MSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGH 342
Query: 330 AREATQVFREMIKRGCEPTMHTYIMLLQG--HLGKRGR----------KGPDPLVNFDTI 377
EA ++ + M + EP + Y +L+QG + GK KG P V T+
Sbjct: 343 LDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTV 402
Query: 378 FVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY-----SNEEGVVMFEEVGK 431
+ GL+K G S +A + + G YN + + ++ G ++ E VG+
Sbjct: 403 MISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGR 461
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 141/291 (48%), Gaps = 11/291 (3%)
Query: 73 NSITFNRMVDIIGKSRNI---DLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
+++TFN +VD + K I +ET+ E G VN T+ + ++ +
Sbjct: 186 DTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVN--TYNALMDGYCSQSQMDEAQK 243
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYC 188
F+IM GC S+ N ++K C+ + EAK L+ ++S + + P+ + Y L+KG+C
Sbjct: 244 LFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFC 303
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
G +A K+ M G P + +++ K DEA ++ + M+ +++ +
Sbjct: 304 QDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEP-NI 362
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
Y I+I MC GK+ A + +F +GI+ D +T + +I GLL G EA ++ +
Sbjct: 363 FIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRD 422
Query: 309 IEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
+ P+ Y+ +I+G LR A ++ EM+ RG T+ ML
Sbjct: 423 MAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQML 473
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 118/250 (47%), Gaps = 18/250 (7%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
++PN + + L+ G +I+A K+++ M G+EP + +I K+ A+
Sbjct: 43 LQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAI 102
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
++ + M K + Y +ID +CK I++A L EM RGI + +T SSI++G
Sbjct: 103 QLLKKMEEKGCKP-NVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHG 161
Query: 293 LLARGRLREAY----KVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
GR EA ++VE PD ++ L+ GL + EA VF MI++G EP
Sbjct: 162 FCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPN 221
Query: 349 MHTYIMLLQGHLGKRG------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVE 396
++TY L+ G+ + RKG P V I + G K+G+ +D AK +
Sbjct: 222 VNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGR-IDEAKGLL 280
Query: 397 RVMNRGVEVP 406
M+ P
Sbjct: 281 AEMSHKALTP 290
>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
Length = 479
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/427 (22%), Positives = 179/427 (41%), Gaps = 93/427 (21%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAE 120
++Q +P N++++ +V + ++ ID T+ EM R +LV D T+ + + TL +
Sbjct: 27 FSQDCKP----NALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCK 82
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAY 180
R + + + FF M + P+ + Y
Sbjct: 83 ARRISRAIEFFETMPE--------------------------------------PDVVTY 104
Query: 181 GWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
L+ G C G + +A ++ M G PS +I+ F K+ + + A + Q+M
Sbjct: 105 NTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMAS 164
Query: 241 KRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
++ + +Y +I+ +CK K+ QAY + EEM G + D +T +++I+GL + RL
Sbjct: 165 RKCSPT-VYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLH 223
Query: 301 EAYKV----VEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
EA + VE +PD + LI+GL R +EA +F+ M K+GC P + T+ +L+
Sbjct: 224 EAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLV 283
Query: 357 QG--------------------------------HLGKR-------------GRKGPDPL 371
LG+R R+G P
Sbjct: 284 SKLCILRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPN 343
Query: 372 VNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGK 431
V T F GL + + A + R++ +G+E YN + + + + M E++ +
Sbjct: 344 VVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVR 403
Query: 432 KLREVGL 438
+ + GL
Sbjct: 404 YMDQSGL 410
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 112/241 (46%), Gaps = 13/241 (5%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMV 128
F + ITF +++ + + I + Q M ++ D T + + L +R+L+ +
Sbjct: 237 FQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPAL 296
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGY 187
+ + N C ++ + + + L +R+ A L+ K++ + PN + Y KG
Sbjct: 297 SV--VRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGL 354
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
D + + A + + M ++G EP + + +++ F K ++ D A K+ V+ MD G
Sbjct: 355 GDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKM-----VRYMDQSG 409
Query: 248 LS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
L TY ++ C++GK+ +L M RG + D T S+++ GL G+ AY
Sbjct: 410 LPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFMVGQADAAY 469
Query: 304 K 304
Sbjct: 470 S 470
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 132/329 (40%), Gaps = 48/329 (14%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVNFF 131
+ +T+ ++D+ K + + LQ M R+ +++ L + R++ + F
Sbjct: 135 SDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLF 194
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
M GC+ N ++ LC ++ + EAK L+ + E +P++I + LI+G C
Sbjct: 195 EEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTT 254
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD---------------------- 228
+ EA ++ M +G P + ++ + K
Sbjct: 255 DRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNYPACPEAVILYTP 314
Query: 229 -----------DEAMKVFQMMRVKRMDDLGLSTYRIVI----DWMCKRGKISQAYTMLEE 273
D A ++ Q M +R + TY DW K G +AY
Sbjct: 315 IFRELGRRRGFDRAARLLQKM-ARRGVPPNVVTYTAFFKGLGDW--KEGM--RAYREFRR 369
Query: 274 MFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRR 329
M ++GIE D + + ++ G RL A K+V +++ P+I Y+ L+ R +
Sbjct: 370 MLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGK 429
Query: 330 AREATQVFREMIKRGCEPTMHTYIMLLQG 358
++ M+ RG +P + T+ L+ G
Sbjct: 430 VEAIGELLHTMVSRGRQPDVATWSTLVAG 458
>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 122/512 (23%), Positives = 208/512 (40%), Gaps = 84/512 (16%)
Query: 2 PVDPGHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQ 61
P P + R+C ++ ++ + S+L NF + + + N L+ FFQ
Sbjct: 38 PAPPELVSRICRLVLLRRCNAISKL-------NFVFSDDIVDAVLRNLRLNPTASLGFFQ 90
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNID--------------------LFWETLQEMG 101
+ K Q F N ++ ++V I+ + R D + W+ L +
Sbjct: 91 FVSKQQN-FRPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWDELVGVY 149
Query: 102 RRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSL----EMLNKVVK------ 151
R + F + L E K + F M CG SL +LN +VK
Sbjct: 150 REFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHT 209
Query: 152 -------------------------TLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIK 185
C+ V EA + K+ ++PN + Y LI
Sbjct: 210 AHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLIN 269
Query: 186 GYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD 245
GY +GD+ A + M+++G ++ +I+ + K K DEA KV + M+ +
Sbjct: 270 GYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALV 329
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
Y ++ID C+ GKI A +L+EM + G++ + +S+I G RG + EA V
Sbjct: 330 PDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGV 389
Query: 306 VEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG--- 358
+ + KPD Y+ L+ G R EA + +M++ G EPT+ TY LL+G
Sbjct: 390 ITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCR 449
Query: 359 -----------HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPR 407
HL + PD V + T+ + GL K A+ + ++ RG R
Sbjct: 450 VGAFDDALQIWHLMMKRGVAPDE-VGYSTL-LDGLFKMENFEGASTLWKDILARGFTKSR 507
Query: 408 FDYNKFLHYYSNEEGVVMFEEVGKKLREVGLA 439
+N + +V EE+ K++++G +
Sbjct: 508 ITFNTMISGLCKMGKMVEAEEIFDKMKDLGCS 539
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 124/260 (47%), Gaps = 39/260 (15%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEA 196
G + +L + N ++ C+R + EA+ +I ++ +W +KP+ +Y L+ GYC G EA
Sbjct: 362 GLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEA 421
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM--RVKRMDDLGLS----- 249
+ + M EG EP++ + +++ ++ D+A++++ +M R D++G S
Sbjct: 422 FNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDG 481
Query: 250 ---------------------------TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEAD 282
T+ +I +CK GK+ +A + ++M G D
Sbjct: 482 LFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPD 541
Query: 283 NLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFR 338
+T ++I G + +A+KV +E+ P I +Y+ LI GL + RR E T +
Sbjct: 542 GITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLT 601
Query: 339 EMIKRGCEPTMHTYIMLLQG 358
EM RG P + TY L+ G
Sbjct: 602 EMGIRGLTPNIVTYGALIDG 621
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 91/399 (22%), Positives = 168/399 (42%), Gaps = 53/399 (13%)
Query: 70 FAHNSITFNRMVDII---GKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKK 126
F + ITFN M+ + GK + ++ ++++G + T++ + + + +
Sbjct: 503 FTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSP--DGITYRTLIDGYCKASNVGQ 560
Query: 127 MVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIK 185
M S+EM N ++ L + + +VE L+ ++ + PN + YG LI
Sbjct: 561 AFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALID 620
Query: 186 GYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR------ 239
G+C G L +A + MT+ G +I + M+ +++ + DEA + Q M
Sbjct: 621 GWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFP 680
Query: 240 ---------------VKRMDDLGLS----------TYRIVIDWMCKRGKISQAYTMLEEM 274
K D L S Y I I +CK GK+ A +
Sbjct: 681 DHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSML 740
Query: 275 FKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRA 330
+G DN T ++I+G A G + EA+++ +E+ + P+I Y+ LI GL +
Sbjct: 741 SLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENV 800
Query: 331 REATQVFREMIKRGCEPTMHTYIMLLQGHL------------GKRGRKGPDPLVNFDTIF 378
A ++F ++ ++G P + TY L+ G+ K +G P V +
Sbjct: 801 DRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSAL 860
Query: 379 VGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
+ GL K G + K + +++ GV+ +Y + Y
Sbjct: 861 INGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGY 899
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 128/283 (45%), Gaps = 32/283 (11%)
Query: 146 LNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
N ++ LC+ +VEA+ + K+ + P+ I Y LI GYC ++ +A K+ M
Sbjct: 510 FNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAME 569
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
E PSI++ + +I FK + E + M ++ + + TY +ID CK G +
Sbjct: 570 REPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTP-NIVTYGALIDGWCKEGML 628
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA----YKVVEEIEKPDISLYHGL 320
+A++ EM + G+ A+ + S+++ GL GR+ EA K+V+ PD +
Sbjct: 629 DKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPD---HECF 685
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVG 380
+K +R A Q + + C+ T+++ P+ +V I +
Sbjct: 686 LKSDIRY----AAIQKIADSLDESCK----TFLL-------------PNNIVY--NIAIA 722
Query: 381 GLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGV 423
GL K GK DA ++ + +G F Y +H YS V
Sbjct: 723 GLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNV 765
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 96/193 (49%), Gaps = 5/193 (2%)
Query: 172 WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEA 231
++ PN I Y I G C G + +A + +++++ +GF P +I + DEA
Sbjct: 709 FLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEA 768
Query: 232 MKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
++ M ++R + TY +I+ +CK + +A + ++ ++G+ + +T +++I
Sbjct: 769 FRLRDEM-LRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLID 827
Query: 292 GLLARGRLREAYKV----VEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
G G + A+K+ +EE P + Y LI GL + + ++ +MIK G +
Sbjct: 828 GYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDS 887
Query: 348 TMHTYIMLLQGHL 360
+ Y L+QG++
Sbjct: 888 KLIEYCTLVQGYI 900
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 91/186 (48%), Gaps = 8/186 (4%)
Query: 147 NKVVKTLCQRKLVVEAK--YLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
N + LC+ V +A+ + +L L ++ P+ Y LI GY G++ EA ++ + M
Sbjct: 718 NIAIAGLCKTGKVDDARRFFSMLSLKGFV-PDNFTYCTLIHGYSAAGNVDEAFRLRDEML 776
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
G P+I + +I K D A ++F + K + + TY +ID CK G +
Sbjct: 777 RRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFP-NVVTYNTLIDGYCKIGNM 835
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISL----YHGL 320
A+ + ++M + GI +T S++I GL G + + K++ ++ K + Y L
Sbjct: 836 DAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTL 895
Query: 321 IKGLLR 326
++G +R
Sbjct: 896 VQGYIR 901
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 73/139 (52%), Gaps = 1/139 (0%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
L + PN + Y LI G C ++ A ++++ + +G P++ + +I+ + KI
Sbjct: 776 LRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNM 835
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
D A K+ M ++ + TY +I+ +CK G I ++ +L +M K G+++ + +
Sbjct: 836 DAAFKLKDKM-IEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCT 894
Query: 289 IIYGLLARGRLREAYKVVE 307
++ G + G +++ +K+ +
Sbjct: 895 LVQGYIRSGEMQKIHKLYD 913
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 81/182 (44%), Gaps = 2/182 (1%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMV 128
F ++ T+ ++ + N+D + EM RR LV N T+ + L + + +
Sbjct: 745 FVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQ 804
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGY 187
FH ++ G ++ N ++ C+ + A L K+ E I P+ + Y LI G
Sbjct: 805 RLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGL 864
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C GD+ + K+ N M G + + +++ + + + + K++ MM ++ +
Sbjct: 865 CKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMMHIRCLSTTA 924
Query: 248 LS 249
+S
Sbjct: 925 IS 926
>gi|302767258|ref|XP_002967049.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
gi|300165040|gb|EFJ31648.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
Length = 454
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/427 (22%), Positives = 178/427 (41%), Gaps = 93/427 (21%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAE 120
++Q +P N++++ +V + ++ ID T+ EM R +LV D T+ + + TL +
Sbjct: 2 FSQDCKP----NALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCK 57
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAY 180
R + + + FF M + P+ + Y
Sbjct: 58 ARRISRAIEFFETMPE--------------------------------------PDVVTY 79
Query: 181 GWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
L+ G C G + +A ++ M G PS +I+ F K+ + + A + Q+M
Sbjct: 80 NTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMAS 139
Query: 241 KRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
++ + +Y +I+ +CK K+ QAY + EEM G + D +T +++I+GL + RL
Sbjct: 140 RKCSPT-VYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLH 198
Query: 301 EAYKV----VEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
EA + VE +PD + LI+GL R +EA +F+ M K+GC P + T+ +L+
Sbjct: 199 EAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLV 258
Query: 357 QG--------------------------------HLGKR-------------GRKGPDPL 371
LG+R R+G P
Sbjct: 259 SKLCIRRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVAPN 318
Query: 372 VNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGK 431
V T F GL + + A + R++ +G+E YN + + + M E++ +
Sbjct: 319 VVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKANRLDMAEKMVR 378
Query: 432 KLREVGL 438
+ + GL
Sbjct: 379 YMDQSGL 385
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 112/241 (46%), Gaps = 13/241 (5%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMV 128
F + ITF +++ + + I + Q M ++ D T + + L R+L+ +
Sbjct: 212 FQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPAL 271
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGY 187
+ + N C ++ + + + L +R+ A L+ K++ + PN + Y KG
Sbjct: 272 SV--VRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGL 329
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
D + + A + + M ++G EP + + +++ F K N+ D A K+ V+ MD G
Sbjct: 330 GDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKANRLDMAEKM-----VRYMDQSG 384
Query: 248 LS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
L TY ++ C++GK+ +L M RG + D T S+++ GL G++ AY
Sbjct: 385 LPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFRVGQVDAAY 444
Query: 304 K 304
Sbjct: 445 S 445
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 137/329 (41%), Gaps = 48/329 (14%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVNFF 131
+ +T+ ++D+ K + + LQ M R+ +++ L + R++ + F
Sbjct: 110 SDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLF 169
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
M GC+ N ++ LC ++ + EAK L+ + E +P++I + LI+G C
Sbjct: 170 EEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTT 229
Query: 191 GDLIEASKIWNLMTDEG--------------------FEPSIDVV------DKMIETFFK 224
+ EA ++ M +G P++ VV + + +
Sbjct: 230 DRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNYPACPEAVILYTP 289
Query: 225 INKD-------DEAMKVFQMMRVKRMDDLGLSTYRIVI----DWMCKRGKISQAYTMLEE 273
I ++ D A ++ Q M +R + TY DW K G +AY
Sbjct: 290 IFRELGRRRGFDRAARLLQKM-ARRGVAPNVVTYTAFFKGLGDW--KEGM--RAYREFRR 344
Query: 274 MFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRR 329
M ++GIE D + + ++ G RL A K+V +++ P+I Y+ L+ R +
Sbjct: 345 MLEQGIEPDMVAYNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGK 404
Query: 330 AREATQVFREMIKRGCEPTMHTYIMLLQG 358
++ M+ RG +P + T+ L+ G
Sbjct: 405 VEAIGELLHTMVSRGRQPDVATWSTLVAG 433
>gi|359492357|ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Vitis vinifera]
Length = 476
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/430 (23%), Positives = 195/430 (45%), Gaps = 32/430 (7%)
Query: 4 DPGHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYT 63
DP R+C I+ P+ L +SLS ++ + F + Y FF++
Sbjct: 13 DPTK--RICKIMIS---CPKLELDTSLSESGIRVSPIVVENVLKRFENAGMLAYQFFEWA 67
Query: 64 QKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRE 123
K Q + H+ ++ M++ + K R + W+ + +M +++N +TF I + A ++
Sbjct: 68 GK-QRNYTHSIRAYHTMIESLAKIRQYQIMWDLVNKMRSLKILNVETFCIIMRKYARSQK 126
Query: 124 LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWL 183
+K+ V F+IM +L N ++ LC+ K VV+A+ + + + P+ Y L
Sbjct: 127 VKEAVYTFNIMEKYDVPPNLAAFNSLLSALCKSKNVVKAQEIFNGMKDQFIPDSKTYSIL 186
Query: 184 IKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM 243
++G+ +L +A +I+ M D G +P I M++ K + DEA+ + VK M
Sbjct: 187 LEGWGKAPNLPKAREIFREMVDMGCDPDIVTYGIMVDILCKAGRVDEAVGI-----VKEM 241
Query: 244 DDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
D Y +++ +I A +M + IEAD +++I +L
Sbjct: 242 DSSVCKPTSFIYSVLVHTYGIENRIEDAVYTFLDMERNEIEADVAVYNALIGAFCKVNKL 301
Query: 300 REAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
+ AY+V+ E++ +P+ + ++ L+ EA +VFR MIK C+P TY M+
Sbjct: 302 KNAYRVLNEMDCKGIRPNSRTCNIILNSLISCGDTDEAFRVFRRMIKV-CDPDADTYTMM 360
Query: 356 LQG-----------HLGKRGR-KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
++ + K R K P ++ ++ + GL K G + A +E ++ +G+
Sbjct: 361 IKMFCENDKLEMALKVWKYMRLKQFVPSMHTFSVLINGLCKKGNASKACILLEEMIEKGI 420
Query: 404 EVPRFDYNKF 413
+ K
Sbjct: 421 RPSSVTFGKL 430
>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
Length = 545
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 145/295 (49%), Gaps = 6/295 (2%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMV 128
F+ N I++ M+D + KSR +D ++M + + D T+ + L + R +K+
Sbjct: 201 FSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAY 260
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL--SEWIKPNEIAYGWLIKG 186
+ F GC ++ N ++ LC+ + A L + +KP+ Y LI G
Sbjct: 261 DLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALING 320
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
+A +++ M D G P + + +++ K +D+AM++F+ M V + D
Sbjct: 321 LNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDP 380
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
+ TY ++ID CK ++ A + +EM R + D +T +++I L R+ EA+++
Sbjct: 381 NVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELF 440
Query: 307 EEIE---KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
E I KPD L++ ++ G ++ R +A ++ M+ GC PT+ TY L+ G
Sbjct: 441 ESIGKTCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTG 495
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 169/368 (45%), Gaps = 18/368 (4%)
Query: 2 PVDPGHLVRVCTILYQQQYSPE---SRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYL 58
P+ P + R+ I+ +Q + + SL L + ++ + P +
Sbjct: 29 PLPPAEIERLAEIILRQVVDSKRAGEGIEKSLGLYGDILVPDLVGKVIHRIP-DPNTAWE 87
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNID---LFWETLQEMGRRRLVNDKTFKIAL 115
FQ+ K Q F HN T N ++ + K+R ++ LF+++ M ++ ++ +
Sbjct: 88 VFQWAGK-QSKFTHNRFTCNNLLSVYVKARRVEDAHLFFQS--HMKNVFEPDEVSYNTLM 144
Query: 116 MTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKP 175
+ ++KK + F M D G L N V++ LC + A + +S P
Sbjct: 145 NGFFKAGDVKKALALFGEMKDSGIAV-LRSHNIVLRGLCSGGKISMAWEVFKDMSGIFSP 203
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
N I+Y +I G C + +A ++ M D+ P + +I+ K + EA +F
Sbjct: 204 NLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLF 263
Query: 236 QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRG-IEADNLTLSSIIYGLL 294
+ R K + TY +ID +CK G+I A T+ ++M + ++ D T S++I GL
Sbjct: 264 EEARAKGCHPT-VVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLN 322
Query: 295 ARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREM-IKRGCEPTM 349
R +AY++ EE+ PD+ Y+ L+ GL + +A ++FR+M + C+P +
Sbjct: 323 LSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNV 382
Query: 350 HTYIMLLQ 357
TY +L+
Sbjct: 383 ITYTVLID 390
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/199 (19%), Positives = 84/199 (42%), Gaps = 2/199 (1%)
Query: 42 FLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMG 101
+ + N LS R + Y + + + +T+N ++D + KS D E ++MG
Sbjct: 314 YSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMG 373
Query: 102 RRRLVNDK--TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLV 159
+ + T+ + + +V L V M V++ LC+ +
Sbjct: 374 VGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRI 433
Query: 160 VEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMI 219
EA L + + KP+ + + ++ GYC + + +A K+ + M D G P++ ++
Sbjct: 434 DEAHELFESIGKTCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALV 493
Query: 220 ETFFKINKDDEAMKVFQMM 238
F + + +A+ ++ M
Sbjct: 494 TGFCRTGRYSDALIMYHEM 512
>gi|115448805|ref|NP_001048182.1| Os02g0759500 [Oryza sativa Japonica Group]
gi|46805701|dbj|BAD17102.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47497356|dbj|BAD19395.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537713|dbj|BAF10096.1| Os02g0759500 [Oryza sativa Japonica Group]
gi|125583759|gb|EAZ24690.1| hypothetical protein OsJ_08460 [Oryza sativa Japonica Group]
gi|215704115|dbj|BAG92955.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215766866|dbj|BAG99094.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 555
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/415 (25%), Positives = 182/415 (43%), Gaps = 38/415 (9%)
Query: 28 SSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIG-- 85
++L + LT + + + + FF + Q + H + T+N ++DI+
Sbjct: 101 AALDALGAELTTPLVADVLHRLRYDEKLAFRFFVWASH-QDGYEHEAATYNDVIDILSGT 159
Query: 86 --KSRNIDLFWETLQEMGRRRL----VNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGC 139
K+R + + L M RRR V+D + T + L+K+ +
Sbjct: 160 RYKARQFGVLCDVLDHMKRRRTRSVPVDDLLGILRAYTEKHLTHLRKLAKKRRVRMRTPP 219
Query: 140 EYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKI 199
E + LN ++ C+ +V EA+ + ++ + N Y L G+C D A K+
Sbjct: 220 E--TDALNVLLDAFCKCGMVREAEVVFSRVKRKLLGNAETYSILFFGWCRARDPKRAMKV 277
Query: 200 WNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK--RMDDLGLSTYRIVIDW 257
M P + I++F EA +F+ MR + + TY I+I
Sbjct: 278 LEEMIQMKHTPENFTYNAAIDSFCSAGLVSEARDLFEFMRTEGSTISSPTAKTYSIMIAA 337
Query: 258 MCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PD 313
+ K G++ + + ++ EM K G D T +I G+L +L AY V++E+ K PD
Sbjct: 338 LAKAGQMEECFELISEMRKCGCMPDVSTYKDLIEGMLLVDKLDAAYCVLDEMAKAGFPPD 397
Query: 314 ISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVN 373
I Y+ +K L L++A +A ++ MI+ CEP++HTY ML+ R PD +N
Sbjct: 398 IVTYNCFLKVLCGLQKADDALELCERMIEAHCEPSVHTYNMLMVMFFEMR---EPDRAIN 454
Query: 374 F-------------DT--IFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
DT + GL +G++ DA ++ V+NRG+ + Y KF
Sbjct: 455 IWIEMDKRGCHRAVDTYETMIDGLFDSGRTEDATALLDEVINRGM---KLSYKKF 506
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 109/249 (43%), Gaps = 18/249 (7%)
Query: 74 SITFNRMVD------IIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKM 127
+ T+N +D ++ ++R DLF E KT+ I + LA+ ++++
Sbjct: 290 NFTYNAAIDSFCSAGLVSEAR--DLFEFMRTEGSTISSPTAKTYSIMIAALAKAGQMEEC 347
Query: 128 VNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVE---AKYLILK--LSEWIKPNEIAYGW 182
M CGC + K L + L+V+ A Y +L P+ + Y
Sbjct: 348 FELISEMRKCGCMPDV----STYKDLIEGMLLVDKLDAAYCVLDEMAKAGFPPDIVTYNC 403
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
+K C + +A ++ M + EPS+ + ++ FF++ + D A+ ++ M KR
Sbjct: 404 FLKVLCGLQKADDALELCERMIEAHCEPSVHTYNMLMVMFFEMREPDRAINIWIEMD-KR 462
Query: 243 MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
+ TY +ID + G+ A +L+E+ RG++ +I+ L A G L
Sbjct: 463 GCHRAVDTYETMIDGLFDSGRTEDATALLDEVINRGMKLSYKKFDAIMLRLSAVGNLGAI 522
Query: 303 YKVVEEIEK 311
+++ E + +
Sbjct: 523 HRLSEHMRR 531
>gi|75194072|sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74900, mitochondrial; AltName: Full=Protein
ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
Precursor
gi|5882733|gb|AAD55286.1|AC008263_17 Contains a PF|01535 DUF17 domain [Arabidopsis thaliana]
gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical protein; 69434-67986 [Arabidopsis thaliana]
Length = 482
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 180/400 (45%), Gaps = 25/400 (6%)
Query: 36 NLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWE 95
NL + ++ N+ P + + FF + + H++ +F+ +DI + W
Sbjct: 57 NLVNSVLKRLWNHGPKALQ----FFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWS 112
Query: 96 TLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLC 154
+ M R+ + KTF I A + K V F M++ GC L N ++ LC
Sbjct: 113 LIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLC 172
Query: 155 QRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDV 214
+ K V +A L L + + Y ++ G+C + +A ++ M + G P++
Sbjct: 173 KSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTT 232
Query: 215 VDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEM 274
+ M++ FF+ + A + F M+ KR ++ + TY V+ G+I +A + +EM
Sbjct: 233 YNTMLKGFFRAGQIRHAWEFFLEMK-KRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEM 291
Query: 275 FKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRA 330
+ G+ T +++I L + + A + EE+ + P+++ Y+ LI+GL
Sbjct: 292 IREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEF 351
Query: 331 REATQVFREMIKRGCEPTMHTYIMLLQGH---------LGKRGRKGP-DPLVNFDT--IF 378
++ + M GCEP TY M+++ + LG + G D L N DT I
Sbjct: 352 SRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNIL 411
Query: 379 VGGLVKAGKSLD---AAKYVERVMNRGVEVPRFDYNKFLH 415
+ G+ +S D A K + ++ RG +F +N+ L+
Sbjct: 412 ISGMFVRKRSEDMVVAGKLLLEMVERGFIPRKFTFNRVLN 451
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 105/234 (44%), Gaps = 14/234 (5%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
N T+N M+ ++ I WE EM +R ++ T+ + E+K+ N F
Sbjct: 229 NLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVF 288
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIK----PNEIAYGWLIKGY 187
M G S+ N +++ LC++ V A ++ E ++ PN Y LI+G
Sbjct: 289 DEMIREGVLPSVATYNAMIQVLCKKDNVENA---VVMFEEMVRRGYEPNVTTYNVLIRGL 345
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL- 246
G+ ++ M +EG EP+ + MI + + ++ ++A+ +F+ M D L
Sbjct: 346 FHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKM--GSGDCLP 403
Query: 247 GLSTYRIVIDWMCKRGKISQ---AYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
L TY I+I M R + A +L EM +RG T + ++ GLL G
Sbjct: 404 NLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERGFIPRKFTFNRVLNGLLLTG 457
>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
Length = 603
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 115/470 (24%), Positives = 208/470 (44%), Gaps = 58/470 (12%)
Query: 2 PVDPGHLVRVCTILYQQQYSPESRLHSSLSSCNFN-----LTHEFFLQICNNFPL-SWRP 55
P+ + RVC+++ + Y+ + + S +F LTHE + + + +
Sbjct: 38 PISQTMVQRVCSLVCES-YNQHAHMRVSSQRLHFGIEVDFLTHEQAVSVVASLASDAGSM 96
Query: 56 VYLFFQYTQKAQPCFAHNSITFNRMVDIIGKS----RNIDLFWETLQEMGRRRLVNDKTF 111
V L F + P F H F R+ + S RN + E ++ M
Sbjct: 97 VTLSFFHWAIGYPKFRH----FMRLYIVCAMSLIGNRNSEKACEVMRCM----------- 141
Query: 112 KIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS- 170
+ + +EV LK+ V M++ G + LN ++K + LV A+ L ++
Sbjct: 142 ---VESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCV 198
Query: 171 EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDE 230
++P+ I+Y ++ YC +G+++EA K ++M + GF VVD T +
Sbjct: 199 RGVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGF-----VVDNATFTLIISRFSGK 253
Query: 231 AMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTL 286
+ +R+ D+GL + +I+ +CKRG I QA+ MLEEM +G + + T
Sbjct: 254 GYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTH 313
Query: 287 SSIIYGLLARGRLREAYK-----VVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMI 341
+S+I GL +G +A++ V E KP++ Y +I G R + A + M
Sbjct: 314 TSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMK 373
Query: 342 KRGCEPTMHTYIMLLQGH------------LGKRGRKGPDP-LVNFDTIFVGGLVKAGKS 388
++G P +TY L+ GH + +G P L ++ I V GL K G+
Sbjct: 374 EQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAI-VNGLCKRGRV 432
Query: 389 LDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
+A K +E G++ +F YN + + +E + + K+ ++G+
Sbjct: 433 QEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGI 482
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 168/368 (45%), Gaps = 34/368 (9%)
Query: 73 NSITFNRMVDIIGKSRNI---DLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
+SI++ MV + K NI D + + E G +V++ TF + + + + +
Sbjct: 204 DSISYRVMVVMYCKIGNILEADKWLSVMLERGF--VVDNATFTLIISRFSGKGYTTRALW 261
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL--SEWIKPNEIAYGWLIKGY 187
+F + D G E +L +++ LC+R + +A ++ ++ W KPN + LI G
Sbjct: 262 YFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGW-KPNVYTHTSLIDGL 320
Query: 188 CDVGDLIEASKIW-NLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
C G +A +++ L+ E +P++ MI + + +K + A M + RM +
Sbjct: 321 CKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAE-----MLLSRMKEQ 375
Query: 247 GL----STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
GL +TY +ID CK G +AY ++ M G + T ++I+ GL RGR++EA
Sbjct: 376 GLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEA 435
Query: 303 YKVVEE----IEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL-- 356
YK++E+ KPD Y+ L+ + R+A +F +M+K G +P +H+Y L+
Sbjct: 436 YKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAV 495
Query: 357 ----------QGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
+ + R G P T + G + G A K+ R+ + G
Sbjct: 496 FCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPD 555
Query: 407 RFDYNKFL 414
Y +
Sbjct: 556 SITYGAII 563
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 107/242 (44%), Gaps = 12/242 (4%)
Query: 149 VVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEG 207
++ C+ + A+ L+ ++ E + PN Y LI G+C G+ A + NLM+ EG
Sbjct: 352 MISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEG 411
Query: 208 FEPSIDVVDKMIETFFKINKDDEAMKVFQ--MMRVKRMDDLGLSTYRIVIDWMCKRGKIS 265
F P++ + ++ K + EA K+ + + D TY I++ CK+ I
Sbjct: 412 FSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKF---TYNILMSEHCKQENIR 468
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLI 321
QA + +M K GI+ D + +++I R++E+ EE + P Y +I
Sbjct: 469 QALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMI 528
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGG 381
G R A + F + GC P TY ++ G + R L +D++ G
Sbjct: 529 CGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSL--YDSMIEKG 586
Query: 382 LV 383
LV
Sbjct: 587 LV 588
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 76/171 (44%), Gaps = 2/171 (1%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMV 128
F+ N T+N +V+ + K + ++ L++ + L DK T+ I + + +++ +
Sbjct: 412 FSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQAL 471
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGY 187
F+ M G + + ++ C+ + E++ + I P Y +I GY
Sbjct: 472 ALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGY 531
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
C G+L A K ++ ++D G P +I K +K DEA ++ M
Sbjct: 532 CREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSM 582
>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
Length = 833
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 179/382 (46%), Gaps = 28/382 (7%)
Query: 60 FQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTL 118
F+ K + C NS+T++ ++ + ++ ++ ++ QEM + + +T+ + +
Sbjct: 186 FEKMSKEESC-RPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAK 244
Query: 119 AEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNE 177
++ K + M C ++ ++ LC+ + EA + K L + P
Sbjct: 245 CDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGI 304
Query: 178 IAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQM 237
I + LI GYC G ++ A ++ ++M +P+I ++++E +++K + K F +
Sbjct: 305 ITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSK---SYKAFLL 361
Query: 238 MRVKRMDDLGL----STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
+R R+ D GL TY I++D CK G+++ A+ + M G+E D T +++I GL
Sbjct: 362 LR--RVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGL 419
Query: 294 LARGRLREAYKVVEEIEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
GRL +A ++ + K ISL + LI G ++ +A++ +F M++ C T
Sbjct: 420 CKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTA 479
Query: 350 HTYIMLL------------QGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVER 397
HT+ L LGK + G P V TI + G +AG++ + K +ER
Sbjct: 480 HTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLER 539
Query: 398 VMNRGVEVPRFDYNKFLHYYSN 419
+ G + Y ++ N
Sbjct: 540 MKQAGCSPNVYTYTIIINGLCN 561
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 107/239 (44%), Gaps = 18/239 (7%)
Query: 203 MTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRG 262
MT+ GF S ++ K+N A V++ M V LG YR V++ +CK G
Sbjct: 84 MTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRM-VNEGFVLGGIDYRTVVNALCKNG 142
Query: 263 KISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK-----PDISLY 317
+ A ++ + G D +S++ R L EA++V E++ K P+ Y
Sbjct: 143 FVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTY 202
Query: 318 HGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------------LGKRGR 365
LI GL R EA Q+ +EM+++GC+P+ TY +L++ L +
Sbjct: 203 SILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMAT 262
Query: 366 KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVV 424
K P V+ TI + L + GK +A +++ G+ +N ++ Y E VV
Sbjct: 263 KACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVV 321
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 114/302 (37%), Gaps = 82/302 (27%)
Query: 103 RRLVNDK------TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQR 156
RR+V++ T+ I + + +L N F+ MN G E ++ LC+
Sbjct: 363 RRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKL 422
Query: 157 KLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGD----------------------- 192
+ +A ++ + + I +E+ + LI G+C +G
Sbjct: 423 GRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTF 482
Query: 193 ------------LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
L EA+ + M G PS+ +IE + + ++K+ +
Sbjct: 483 NCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLE---- 538
Query: 241 KRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR 296
RM G S TY I+I+ +C G++ +A T+L M G+ ++ T + ++ +
Sbjct: 539 -RMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKA 597
Query: 297 GRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
GRL A+++V M+K GC+P H Y LL
Sbjct: 598 GRLDRAFQIVS-------------------------------TMVKNGCQPNSHIYSALL 626
Query: 357 QG 358
G
Sbjct: 627 SG 628
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 111/277 (40%), Gaps = 39/277 (14%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIM 134
TFN +D +GK ++ L +M + LV T I + E + M
Sbjct: 481 TFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERM 540
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDL 193
GC ++ ++ LC V EA+ ++ +S + + PN Y L+K + G L
Sbjct: 541 KQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRL 600
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
A +I + M G +P+ + ++ F N A+ + +D LS+
Sbjct: 601 DRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNT---AIGARALSSTGDLDARSLSSE-- 655
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK-- 311
E DN LSS ++ L+ + A K+ +EI+K
Sbjct: 656 --------------------------ENDNNCLSSHVFRLM---DVDHALKIRDEIKKCG 686
Query: 312 -PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
P LY+ L+ GL + R EA Q+ ++M+K G P
Sbjct: 687 VPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFP 723
>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
Length = 883
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 179/382 (46%), Gaps = 28/382 (7%)
Query: 60 FQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTL 118
F+ K + C NS+T++ ++ + ++ ++ ++ QEM + + +T+ + +
Sbjct: 252 FEKMSKEENC-RPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAK 310
Query: 119 AEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNE 177
++ K + M C ++ ++ LC+ + EA + K L + P
Sbjct: 311 CDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGI 370
Query: 178 IAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQM 237
I + LI GYC G ++ A ++ ++M +P+I ++++E +++K + K F +
Sbjct: 371 ITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSK---SYKAFLL 427
Query: 238 MRVKRMDDLGL----STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
+R R+ D GL TY I++D CK G+++ A+ + M G+E D T +++I GL
Sbjct: 428 LR--RVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGL 485
Query: 294 LARGRLREAYKVVEEIEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
GRL +A ++ + K ISL + LI G ++ +A++ +F M++ C T
Sbjct: 486 CKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTA 545
Query: 350 HTYIMLL------------QGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVER 397
HT+ L LGK + G P V TI + G +AG++ + K +ER
Sbjct: 546 HTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLER 605
Query: 398 VMNRGVEVPRFDYNKFLHYYSN 419
+ G + Y ++ N
Sbjct: 606 MKQAGCSPNVYTYTIIINGLCN 627
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 122/268 (45%), Gaps = 14/268 (5%)
Query: 103 RRLVNDK------TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQR 156
RR+V++ T+ I + + +L N F+ MN G E ++ LC+
Sbjct: 429 RRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKL 488
Query: 157 KLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVV 215
+ +A ++ + + I +E+ + LI G+C +G + ++ M + +
Sbjct: 489 GRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTF 548
Query: 216 DKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEM 274
+ ++ K K +EA + +MM+ + + T+ I+I+ C+ G+ + + MLE M
Sbjct: 549 NCFLDALGKDYKLNEANAMLGKMMKYGLVPSV--VTHTILIEGHCRAGETALSLKMLERM 606
Query: 275 FKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRA 330
+ G + T + II GL GR+ EA ++ + P+ Y L+K ++ R
Sbjct: 607 KQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRL 666
Query: 331 REATQVFREMIKRGCEPTMHTYIMLLQG 358
A Q+ M+K GC+P H Y LL G
Sbjct: 667 DRAFQIVSTMVKNGCQPNSHIYSALLSG 694
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 107/239 (44%), Gaps = 18/239 (7%)
Query: 203 MTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRG 262
MT+ GF S ++ K+N A V++ M V LG YR V++ +CK G
Sbjct: 150 MTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRM-VNEGFVLGGIDYRTVVNALCKNG 208
Query: 263 KISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK-----PDISLY 317
+ A ++ + G D +S++ R L EA++V E++ K P+ Y
Sbjct: 209 FVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTY 268
Query: 318 HGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------------LGKRGR 365
LI GL R EA Q+ +EM+++GC+P+ TY +L++ L +
Sbjct: 269 SILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMAT 328
Query: 366 KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVV 424
K P V+ TI + L + GK +A +++ G+ +N ++ Y E VV
Sbjct: 329 KACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVV 387
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 118/277 (42%), Gaps = 44/277 (15%)
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK--LSEWIKPNEIAYGWLIKGY 187
+M C+ ++ N++++ LC+ +A +L+L+ + + P+ + Y L+ G+
Sbjct: 392 LLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKA-FLLLRRVVDNGLLPDRVTYNILVDGF 450
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C G L A I+N M G EP +I+ K+ + ++A + M VK+ L
Sbjct: 451 CKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSM-VKKGISLD 509
Query: 248 LSTYRIVIDWMCKRGK-----------------------------------ISQAYTMLE 272
T+ +ID CK GK +++A ML
Sbjct: 510 EVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLG 569
Query: 273 EMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLR 328
+M K G+ +T + +I G G + K++E +++ P++ Y +I GL
Sbjct: 570 KMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNG 629
Query: 329 RAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
R EA + M G P TY +L++ H+ K GR
Sbjct: 630 RVEEAETILFSMSSFGVSPNHFTYAVLVKAHV-KAGR 665
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 117/296 (39%), Gaps = 32/296 (10%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIM 134
TFN +D +GK ++ L +M + LV T I + E + M
Sbjct: 547 TFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERM 606
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDL 193
GC ++ ++ LC V EA+ ++ +S + + PN Y L+K + G L
Sbjct: 607 KQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRL 666
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST--- 250
A +I + M G +P+ + ++ F N A+ + +D LS+
Sbjct: 667 DRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNT---AIGARALSSTGDLDARSLSSEEN 723
Query: 251 -------------------YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
Y ++ +CK G+I +A + ++M K G+ D +SSII
Sbjct: 724 DNNCLSNEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDK-AISSIIE 782
Query: 292 GLLARGRLREAYK----VVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
+ + V++ P + Y +I GL R +EA ++ ++++
Sbjct: 783 HYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRH 838
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 131/305 (42%), Gaps = 35/305 (11%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
+ TF ++D + K ++ L M ++ + D+ TF + ++ + K + F
Sbjct: 474 DGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLF 533
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDV 190
M + C + N + L + + EA ++ K+ ++ + P+ + + LI+G+C
Sbjct: 534 ENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRA 593
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS- 249
G+ + K+ M G P++ +I + +EA + + M G+S
Sbjct: 594 GETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETI-----LFSMSSFGVSP 648
Query: 250 ---TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL------------ 294
TY +++ K G++ +A+ ++ M K G + ++ S+++ G +
Sbjct: 649 NHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALS 708
Query: 295 ------ARGRLREAYK---VVEEIEK---PDISLYHGLIKGLLRLRRAREATQVFREMIK 342
AR E + EI+K P LY+ L+ GL + R EA Q+ ++M+K
Sbjct: 709 STGDLDARSLSSEENDNNCLSNEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVK 768
Query: 343 RGCEP 347
G P
Sbjct: 769 HGLFP 773
>gi|224129154|ref|XP_002320514.1| predicted protein [Populus trichocarpa]
gi|222861287|gb|EEE98829.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 142/299 (47%), Gaps = 22/299 (7%)
Query: 79 RMVDIIGKSRNIDLFWETLQEMGRRRLVND--------------KTFKIALMTLAEVREL 124
RM D R D ++T M + R D ++ L +L + +
Sbjct: 123 RMCD--SSPRVFDSLFKTYAHMNKFRNATDVFSRMKDYGFLPTVESCNAYLSSLLDFHRV 180
Query: 125 KKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWL 183
+ F+ M C + N V+ LC+ + +A ++ ++ S I PN ++Y L
Sbjct: 181 DIALTFYREMRRCRISPNSYTFNLVLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTL 240
Query: 184 IKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM 243
I G+C+ G L A+K+ NLM G EP++ + +I F K K EA + F M+V +
Sbjct: 241 IAGHCNKGLLSIATKLKNLMGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNV 300
Query: 244 DDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
TY +I+ + G + A + EEM + G++AD LT +++I GL G+ ++A
Sbjct: 301 TP-NTVTYNTLINGYGQVGNSNMAGKVYEEMMRNGVKADILTYNALILGLCKEGKTKKAA 359
Query: 304 KVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+V+E++K P+ S Y LI G + + A Q+++ M++ GC P T+ ML
Sbjct: 360 FLVKELDKENLVPNASTYSALISGQCARKNSDRAFQLYKSMVRSGCHPNEQTFKMLTSA 418
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 104/239 (43%), Gaps = 28/239 (11%)
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
+ L K Y + A+ +++ M D GF P+++ + + + ++ D A+ ++ MR
Sbjct: 132 FDSLFKTYAHMNKFRNATDVFSRMKDYGFLPTVESCNAYLSSLLDFHRVDIALTFYREMR 191
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
R+ T+ +V+ +CK GK+ +A +L EM GI + ++ +++I G +G L
Sbjct: 192 RCRISPNSY-TFNLVLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTLIAGHCNKGLL 250
Query: 300 REAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
A K+ + K P++ ++ LI G + + EA + F EM P TY L
Sbjct: 251 SIATKLKNLMGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTVTYNTL 310
Query: 356 LQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
+ G+ + G S A K E +M GV+ YN +
Sbjct: 311 INGY-----------------------GQVGNSNMAGKVYEEMMRNGVKADILTYNALI 346
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 110/292 (37%), Gaps = 71/292 (24%)
Query: 90 IDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNK 148
+D+ +EM R R+ N TF + L L + +L+K V M G ++ N
Sbjct: 180 VDIALTFYREMRRCRISPNSYTFNLVLSALCKSGKLEKAVEVLREMESVGITPNVVSYNT 239
Query: 149 VVKTLCQRKLV-VEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEG 207
++ C + L+ + K L ++PN + + LI G+C G L EA++ ++ M
Sbjct: 240 LIAGHCNKGLLSIATKLKNLMGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMN 299
Query: 208 FEPSIDVVDKMIETFFKINKDDEAMKVFQ-MMR--------------------------- 239
P+ + +I + ++ + A KV++ MMR
Sbjct: 300 VTPNTVTYNTLINGYGQVGNSNMAGKVYEEMMRNGVKADILTYNALILGLCKEGKTKKAA 359
Query: 240 --VKRMDDLGL----STYRIVIDWMCKRGKISQAYTM----------------------- 270
VK +D L STY +I C R +A+ +
Sbjct: 360 FLVKELDKENLVPNASTYSALISGQCARKNSDRAFQLYKSMVRSGCHPNEQTFKMLTSAF 419
Query: 271 ------------LEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
L +MF R + +D+ TL I GL G+ A K+ E+E
Sbjct: 420 VKNEDFEGAFNVLMDMFARSMASDSNTLLEIYDGLCQCGKENLAMKLCHEME 471
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 121/315 (38%), Gaps = 70/315 (22%)
Query: 142 SLEMLNKVVKTLCQRKLVVEAKYLIL----KLSEWIKPNEIAYGWLIKGYCDV-GDLIEA 196
SLE N + KTL L +E +IL K S++ I L D+ G L +
Sbjct: 59 SLEFFNSL-KTLNPISLTLETHSIILHILTKKSKFKSAQSILRTLLASRSIDLPGKLFDT 117
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVID 256
M D S V D + +T+ +NK A VF RM D G
Sbjct: 118 LLFSYRMCDS----SPRVFDSLFKTYAHMNKFRNATDVFS-----RMKDYG--------- 159
Query: 257 WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----P 312
F +E+ N LSS LL R+ A E+ + P
Sbjct: 160 ------------------FLPTVESCNAYLSS----LLDFHRVDIALTFYREMRRCRISP 197
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK---------- 362
+ ++ ++ L + + +A +V REM G P + +Y L+ GH K
Sbjct: 198 NSYTFNLVLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTLIAGHCNKGLLSIATKLK 257
Query: 363 --RGRKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY-- 417
G+ G +P +V F+++ + G K GK +A ++ + V YN ++ Y
Sbjct: 258 NLMGKNGLEPNVVTFNSL-IHGFCKEGKLHEANRFFSEMKVMNVTPNTVTYNTLINGYGQ 316
Query: 418 ---SNEEGVVMFEEV 429
SN G V +EE+
Sbjct: 317 VGNSNMAGKV-YEEM 330
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 87/210 (41%), Gaps = 9/210 (4%)
Query: 73 NSITFNRMVDII---GKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
N +TFN ++ GK + F+ ++ M N T+ + +V
Sbjct: 268 NVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTP--NTVTYNTLINGYGQVGNSNMAGK 325
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYC 188
+ M G + + N ++ LC+ +A +L+ +L E + PN Y LI G C
Sbjct: 326 VYEEMMRNGVKADILTYNALILGLCKEGKTKKAAFLVKELDKENLVPNASTYSALISGQC 385
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDE-AMKVFQMMRVKRMDDLG 247
+ A +++ M G P+ + KM+ + F N+D E A V M + M
Sbjct: 386 ARKNSDRAFQLYKSMVRSGCHPN-EQTFKMLTSAFVKNEDFEGAFNVLMDMFARSMAS-D 443
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKR 277
+T + D +C+ GK + A + EM R
Sbjct: 444 SNTLLEIYDGLCQCGKENLAMKLCHEMEAR 473
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 164/375 (43%), Gaps = 25/375 (6%)
Query: 63 TQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEV 121
+ KA+ C + + IT+ +VD + K + WE L+EM V N T+ L L
Sbjct: 216 SMKARGC-SPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRA 274
Query: 122 RELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAY 180
R + + M GC ++ ++ LC+ V +A ++ + + P+ + Y
Sbjct: 275 RRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIY 334
Query: 181 GWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
LI G C + E+ + G +P + +I + N+ DEA ++ ++
Sbjct: 335 NMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVK- 393
Query: 241 KRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
R + Y +ID +CK GK+ +A+ + E M G +AD +T S++I GL GR+
Sbjct: 394 SRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVD 453
Query: 301 EAY----KVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
EA+ ++V P Y+ LIKGL L EA ++ EM + C P+ TY +L+
Sbjct: 454 EAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILI 513
Query: 357 QGHL-------------GKRGRKGPDPLVNFDTI----FVGGLVKAGKSLDAAKYVERVM 399
G + R DTI + GL KAG+ +A Y + ++
Sbjct: 514 HGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMI 573
Query: 400 NRGVEVPRFDYNKFL 414
+ GV Y+ L
Sbjct: 574 DNGVIPDHITYSILL 588
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 167/385 (43%), Gaps = 69/385 (17%)
Query: 64 QKAQPCFAH--------NSITFNRMVDIIGKS-RNIDLFWETLQEMGRRRLVNDKTFKIA 114
+AQ CF N + ++D + K+ R+ID + M +V D A
Sbjct: 26 DQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL-RCFRAMQGSGIVADTVIYTA 84
Query: 115 LMT-LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWI 173
L++ L + + L + + H M D GCE
Sbjct: 85 LLSGLWKEKRLDQALAILHEMRDHGCE--------------------------------- 111
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
PN + Y LI G C + A +++ M PS+ + +++ F+ K + AM
Sbjct: 112 -PNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMA 170
Query: 234 VFQMMRVKRMDDL------GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLS 287
+FQ M +R D+ + TY ++ID +CK ++SQA +LE M RG D +T +
Sbjct: 171 LFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYT 230
Query: 288 SIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
++ GL ++ A++V+ E+ P++ Y+ L+ GL R RR +A + R+M R
Sbjct: 231 ILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCR 290
Query: 344 GCEPTMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLD 390
GC P + TY L+ G L K GR KG P + + + GL KA + +
Sbjct: 291 GCTPNVVTYGTLIDG-LCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDE 349
Query: 391 AAKYVERVMNRGVEVPRFDYNKFLH 415
+ + R ++ G++ Y+ ++
Sbjct: 350 SIALLRRAVSGGIKPDVVTYSSVIY 374
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 145/332 (43%), Gaps = 47/332 (14%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
N +T+N ++ + ++R + +++M R N T+ + L +V +K
Sbjct: 260 NLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAML 319
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDV 190
M D G L + N ++ LC+ V E+ L+ + +S IKP+ + Y +I G C
Sbjct: 320 ADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRS 379
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
L EA ++ + G P + + +I+ K K DEA ++++M D + T
Sbjct: 380 NRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCD-ADVVT 438
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y +ID +CK G++ +A+ +L M + G +T +S+I GL L EA ++VEE+E
Sbjct: 439 YSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEME 498
Query: 311 KPDIS--------LYHG------------------------------------LIKGLLR 326
+ + + L HG LI GL +
Sbjct: 499 RSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCK 558
Query: 327 LRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
R EA F+EMI G P TY +LL+G
Sbjct: 559 AGRVAEALDYFQEMIDNGVIPDHITYSILLEG 590
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 123/266 (46%), Gaps = 26/266 (9%)
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
+P+ Y L++G+C G++ +A + ++ M + P++ + +I+ K + +A++
Sbjct: 6 QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALR 65
Query: 234 VFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
F+ M+ + Y ++ + K ++ QA +L EM G E + +T +S+I GL
Sbjct: 66 CFRAMQGSGI-VADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124
Query: 294 LARG---RLREAYKVVEEIE-KPDISLYHGLIKGLLRLRRAREATQVFREMIKR------ 343
R +E ++ ++ +E P + Y+ L+ GL R + A +F+EM+ R
Sbjct: 125 CKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMD 184
Query: 344 -GCEPTMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSL 389
C P + TY +L+ G L K R +G P V TI V GL K K
Sbjct: 185 DRCSPNVITYSVLIDG-LCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVA 243
Query: 390 DAAKYVERVMNRGVEVPRFDYNKFLH 415
A + + +++ G YN LH
Sbjct: 244 AAWEVLREMLDAGCVPNLVTYNSLLH 269
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 109/238 (45%), Gaps = 6/238 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVNFFHI 133
+T++ ++ + +S +D L + R D L+ L + ++ + + + +
Sbjct: 367 VTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEV 426
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGD 192
M GC+ + + ++ LC+ V EA L+ ++ P+ + Y LIKG CD+
Sbjct: 427 MAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNH 486
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS--- 249
L EA ++ M PS + +I ++ + D A+ + + + + + G +
Sbjct: 487 LDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDT 546
Query: 250 -TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
Y +ID +CK G++++A +EM G+ D++T S ++ GL L E +V
Sbjct: 547 IAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLV 604
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 153/340 (45%), Gaps = 44/340 (12%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMT 117
F + + P N IT++ ++D + K+ + E L+ M R D T+ I +
Sbjct: 102 FRKMDDRCSP----NVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDG 157
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPN 176
L + ++ M D GC +L N ++ LC+ + V +A L+ ++ PN
Sbjct: 158 LCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPN 217
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK--- 233
+ YG LI G C VG + +A + M D+G P + + + +I K ++ DE++
Sbjct: 218 VVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLR 277
Query: 234 -----------------VFQMMRVKRMDDL--------------GLSTYRIVIDWMCKRG 262
++ + R R+D+ + Y +ID +CK G
Sbjct: 278 RAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAG 337
Query: 263 KISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY----KVVEEIEKPDISLYH 318
K+ +A+ + E M G +AD +T S++I GL GR+ EA+ ++V P Y+
Sbjct: 338 KVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYN 397
Query: 319 GLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
LIKGL L EA ++ EM + C P+ TY +L+ G
Sbjct: 398 SLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHG 437
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 143/293 (48%), Gaps = 8/293 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
N +T+N ++ + ++R + +++M R N T+ + L +V +K
Sbjct: 182 NLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAML 241
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDV 190
M D G L + N ++ LC+ V E+ L+ + +S IKP+ + Y +I G C
Sbjct: 242 ADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRS 301
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
L EA ++ + G P + + +I+ K K DEA ++++M D + T
Sbjct: 302 NRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCD-ADVVT 360
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y +ID +CK G++ +A+ +L M + G +T +S+I GL L EA ++VEE+E
Sbjct: 361 YSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEME 420
Query: 311 K----PDISLYHGLIKGLLRLRRAREAT-QVFREMIKRGCEPTMHTYIMLLQG 358
+ P Y+ LI G+ R+ R A F+EMI G P TY +LL+G
Sbjct: 421 RSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEG 473
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 174/396 (43%), Gaps = 33/396 (8%)
Query: 64 QKAQPCFAH--------NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIAL 115
+AQ F H + +T+N ++D + ++ ++ QEM RR + +F I +
Sbjct: 27 DRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDVISFNILV 86
Query: 116 MTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIK 174
L +++ + FF M+D C ++ + ++ LC+ V +A L+ + +
Sbjct: 87 TGLCRAGKIETALEFFRKMDD-RCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCS 145
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+ I Y L+ G C + A ++ M D G P++ + ++ + + +A+ +
Sbjct: 146 PDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALAL 205
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
+ M + + TY +ID +CK G++ A ML +M +G D + + +I GL
Sbjct: 206 MRDMTCRGCTP-NVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLC 264
Query: 295 ARGRLREAY----KVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
++ E+ + V KPD+ Y +I GL R R EA ++ + RGC P +
Sbjct: 265 KADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVI 324
Query: 351 TYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVER 397
Y L+ G L K G+ G D V + + GL KAG+ +A + R
Sbjct: 325 LYSTLIDG-LCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLAR 383
Query: 398 VMNRGVEVPRFDYNKFLHYYSN----EEGVVMFEEV 429
++ G YN + + +E + + EE+
Sbjct: 384 MVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEM 419
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 131/291 (45%), Gaps = 50/291 (17%)
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
+PN + Y LI G C + A +++ M PS+ + +++ F+ K + AM
Sbjct: 7 EPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMA 66
Query: 234 VFQMMRVKRMDDL--------GLS------------------------TYRIVIDWMCKR 261
+FQ M +R D+ GL TY ++ID +CK
Sbjct: 67 LFQEMLDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDDRCSPNVITYSVLIDGLCKA 126
Query: 262 GKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLY 317
++SQA +LE M RG D +T + ++ GL ++ A++V+ E+ P++ Y
Sbjct: 127 NRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTY 186
Query: 318 HGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR------------ 365
+ L+ GL R RR +A + R+M RGC P + TY L+ G L K GR
Sbjct: 187 NSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDG-LCKVGRVKDACAMLADMI 245
Query: 366 -KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
KG P + + + GL KA + ++ + R ++ G++ Y+ ++
Sbjct: 246 DKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIY 296
>gi|449469499|ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
gi|449487784|ref|XP_004157799.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
Length = 502
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 184/417 (44%), Gaps = 23/417 (5%)
Query: 19 QYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFN 78
+ P+S L SL T E ++ FF++ + P +AH++ +F+
Sbjct: 59 ESDPKS-LRGSLHGLQLQFTPELVDKVLKRLWFHGPKALQFFKHLE-YHPSYAHSASSFD 116
Query: 79 RMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIMNDC 137
+DI G+ R+ W + M RR+ + KTF I + + + F M +
Sbjct: 117 HAIDIAGRMRDYKTVWALVARMRARRIGPSSKTFAIIAERFVAAGKPDRAIKVFLSMREH 176
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGDLIEA 196
GC L N ++ LC+ K V A + K L K + ++Y + G+C + +A
Sbjct: 177 GCPQDLHSFNTILDILCKSKRVEMAYNNLFKVLRGKFKADVVSYNIIANGWCLIKRTPKA 236
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVID 256
++ M + G P+I + +++ +F+ + EA + F M+ +R ++ + TY ++
Sbjct: 237 LEVLKEMVERGLTPTITTYNILLKGYFRAGQLKEAWEFFLQMK-EREVEIDVVTYTTMVH 295
Query: 257 WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----P 312
G+I +A + EM GI T +++I L + + A + EE+ K P
Sbjct: 296 GFGVVGEIKRARKVFNEMVGEGILPSTATYNAMIQVLCKKDSVENAVLMFEEMVKKGYVP 355
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL---------QGHLGKR 363
+++ Y+ +I+GL +A + M GCEP + TY + + + L
Sbjct: 356 NLTTYNVVIRGLFHAGNMDKAMEFIERMKTDGCEPNVQTYNVAIRYFCDAGDVEKGLSMF 415
Query: 364 GRKGPDPLVNFDT--IFVGGLVKAGKSLD---AAKYVERVMNRGVEVPRFDYNKFLH 415
+ G L N DT + + + KS D A K + +++RG +F +N+ L+
Sbjct: 416 EKMGQGSLPNLDTYNVLISAMFVRKKSEDLVVAGKLLLEMVDRGFIPRKFTFNRVLN 472
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 104/263 (39%), Gaps = 53/263 (20%)
Query: 190 VGDLIEASKIWNL---MTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
G + + +W L M PS + E F K D A+KVF MR
Sbjct: 122 AGRMRDYKTVWALVARMRARRIGPSSKTFAIIAERFVAAGKPDRAIKVFLSMREHGCPQ- 180
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
L ++ ++D +CK ++ AY L +KV+
Sbjct: 181 DLHSFNTILDILCKSKRVEMAYNNL-------------------------------FKVL 209
Query: 307 EEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------- 359
K D+ Y+ + G ++R +A +V +EM++RG PT+ TY +LL+G+
Sbjct: 210 RGKFKADVVSYNIIANGWCLIKRTPKALEVLKEMVERGLTPTITTYNILLKGYFRAGQLK 269
Query: 360 ------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
L + R+ +V + T+ V G G+ A K ++ G+ YN
Sbjct: 270 EAWEFFLQMKEREVEIDVVTYTTM-VHGFGVVGEIKRARKVFNEMVGEGILPSTATYNAM 328
Query: 414 LHYY----SNEEGVVMFEEVGKK 432
+ S E V+MFEE+ KK
Sbjct: 329 IQVLCKKDSVENAVLMFEEMVKK 351
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 101/230 (43%), Gaps = 13/230 (5%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIM 134
T+N ++ ++ + WE +M R + ++ T+ + V E+K+ F+ M
Sbjct: 254 TYNILLKGYFRAGQLKEAWEFFLQMKEREVEIDVVTYTTMVHGFGVVGEIKRARKVFNEM 313
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIK----PNEIAYGWLIKGYCDV 190
G S N +++ LC++ V A +L E +K PN Y +I+G
Sbjct: 314 VGEGILPSTATYNAMIQVLCKKDSVENA---VLMFEEMVKKGYVPNLTTYNVVIRGLFHA 370
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G++ +A + M +G EP++ + I F ++ + +F+ M + +L T
Sbjct: 371 GNMDKAMEFIERMKTDGCEPNVQTYNVAIRYFCDAGDVEKGLSMFEKMGQGSLPNL--DT 428
Query: 251 YRIVIDWMCKRGK---ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
Y ++I M R K + A +L EM RG T + ++ GLL G
Sbjct: 429 YNVLISAMFVRKKSEDLVVAGKLLLEMVDRGFIPRKFTFNRVLNGLLLTG 478
>gi|255582957|ref|XP_002532249.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528067|gb|EEF30143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 507
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/424 (22%), Positives = 192/424 (45%), Gaps = 26/424 (6%)
Query: 5 PGHL-VRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYT 63
PG L ++V +L + SP ++ +L+ CN +T + L++ W+P +FF +
Sbjct: 45 PGELALKVQNVLKNYRDSPTRKIELALTQCNPTVTEDLILKVLKRHRSDWKPALIFFNWV 104
Query: 64 QKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRR-LVNDKTFKIALMTLAEVR 122
K S +N ++DI+GK R D + L M +R LVN++T+++ + A
Sbjct: 105 SKGGKVLM-GSGAYNEILDILGKMRRFDELSQVLDIMSKREGLVNEETYRVLVNRYAAAH 163
Query: 123 ELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGW 182
++++ + F+ D G E L ++ LC+ K V A+ L+ + +
Sbjct: 164 KVEEAIEIFNTRRDIGLEIDLVSFQNLLMFLCRYKHVQIAESLLYSKGKDFGMDIKTMNI 223
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
++ G+C +G++ EA + W + +P + I+ K K A+K+++ M K+
Sbjct: 224 VLNGWCVLGNVHEAKRFWKDIIGSKCKPDLFTYGTFIKALTKKGKLGTALKIYRAMWEKQ 283
Query: 243 MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
+ +ID +C + ++ +A + EM ++G + T +S+I R+ +
Sbjct: 284 CKP-DVVICNCIIDALCFKNRVPEALEVFREMSQQGCLPNGATYNSLIKHFSRIRRMEKV 342
Query: 303 YKVVEEIEK------PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
Y++++E+ PD ++ L+K L++ E V M + GC + TY ++L
Sbjct: 343 YELLDEMLDKKGSCMPDHITFNYLLKA---LKKPEELPLVLERMERNGCMISTDTYNLIL 399
Query: 357 QGHL------------GKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG-V 403
+ + + + G P TI + L + G+ DA Y + ++G V
Sbjct: 400 RLYADWDCEERVGDTWNEMEKLGLGPDRRSYTIMIHWLYEKGRINDALHYFGEMTSKGMV 459
Query: 404 EVPR 407
PR
Sbjct: 460 SEPR 463
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 119/287 (41%), Gaps = 33/287 (11%)
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
NE Y L+ Y + EA +I+N D G E ID+V + + +++
Sbjct: 148 NEETYRVLVNRYAAAHKVEEAIEIFNTRRDIGLE--IDLVS--FQNLLMFLCRYKHVQIA 203
Query: 236 QMMRVKRMDDLGLS--TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
+ + + D G+ T IV++ C G + +A +++ + D T + I L
Sbjct: 204 ESLLYSKGKDFGMDIKTMNIVLNGWCVLGNVHEAKRFWKDIIGSKCKPDLFTYGTFIKAL 263
Query: 294 LARGRLREAYKVV----EEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
+G+L A K+ E+ KPD+ + + +I L R EA +VFREM ++GC P
Sbjct: 264 TKKGKLGTALKIYRAMWEKQCKPDVVICNCIIDALCFKNRVPEALEVFREMSQQGCLPNG 323
Query: 350 HTY----------------IMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAK 393
TY LL L K+G P D I L+KA K +
Sbjct: 324 ATYNSLIKHFSRIRRMEKVYELLDEMLDKKGSCMP------DHITFNYLLKALKKPEELP 377
Query: 394 YV-ERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLA 439
V ER+ G + YN L Y++ + + ++ ++GL
Sbjct: 378 LVLERMERNGCMISTDTYNLILRLYADWDCEERVGDTWNEMEKLGLG 424
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 171/364 (46%), Gaps = 24/364 (6%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRR--LVNDKTFKIALMTLAEVRELKKMVNF 130
++++ N +V K ++ +QEM + + TF + L + +K +
Sbjct: 258 SNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEI 317
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCD 189
+M G + + N V+ LC+ V EA ++L ++ PN + Y LI C
Sbjct: 318 MDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCK 377
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
+ EA+++ ++T +G P + + +I+ AM++F+ MR K +
Sbjct: 378 ENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEF- 436
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
TY ++ID +C +GK+ +A ML++M G +T +++I G ++REA ++ +E+
Sbjct: 437 TYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEM 496
Query: 310 EKPDIS----LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG- 364
E +S Y+ LI GL + RR +A+Q+ +MI G +P TY LL H + G
Sbjct: 497 EVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLT-HFCRGGD 555
Query: 365 ------------RKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
G +P +V + T+ + GL KAG+ A+K + + +G+ + YN
Sbjct: 556 IKKAADIVQAMTSNGCEPDIVTYGTL-ISGLCKAGRVEVASKLLRSIQMKGIALTPHAYN 614
Query: 412 KFLH 415
+
Sbjct: 615 PVIQ 618
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 166/362 (45%), Gaps = 22/362 (6%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHIM 134
TFN ++ + ++ + L++M LV D KTF + E +L + M
Sbjct: 191 TFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQM 250
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS--EWIKPNEIAYGWLIKGYCDVGD 192
+ GC +S +N +V C+ V +A I ++S + P++ + L+ G C G
Sbjct: 251 VEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGH 310
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ A +I ++M EG++P + + +I K+ + EA++ M + R TY
Sbjct: 311 VKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQM-ITRDCSPNTVTYN 369
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
+I +CK ++ +A + + +GI D T +S+I GL R A ++ EE+
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK 429
Query: 311 --KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGP 368
+PD Y+ LI L + EA + ++M GC ++ TY L+ G +
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREA 489
Query: 369 DPL-------------VNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
+ + V ++T+ + GL K+ + DA++ +++++ G + +F YN L
Sbjct: 490 EEIFDEMEVHGVSRNSVTYNTL-IDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLT 548
Query: 416 YY 417
++
Sbjct: 549 HF 550
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 163/398 (40%), Gaps = 59/398 (14%)
Query: 67 QPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELK 125
Q F + TFN +V+ + K+ ++ E + M + D T+ + L ++ E+K
Sbjct: 288 QDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVK 347
Query: 126 KMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL---------------- 169
+ V F M C + N ++ TLC+ V EA L L
Sbjct: 348 EAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLI 407
Query: 170 --------------------SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFE 209
S+ +P+E Y LI C G L EA + M G
Sbjct: 408 QGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCA 467
Query: 210 PSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYT 269
S+ + +I+ F K NK EA ++F M V + + TY +ID +CK ++ A
Sbjct: 468 RSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSV-TYNTLIDGLCKSRRVEDASQ 526
Query: 270 MLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLL 325
++++M G + D T +S++ G +++A +V+ + +PDI Y LI GL
Sbjct: 527 LMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLC 586
Query: 326 RLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR---------------GRKGPDP 370
+ R A+++ R + +G T H Y ++QG KR PD
Sbjct: 587 KAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDA 646
Query: 371 LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRF 408
V++ +F G G +A ++ ++ +G VP F
Sbjct: 647 -VSYRIVFRGLCNGGGPIREAVDFLVELLEKGF-VPEF 682
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 147/344 (42%), Gaps = 57/344 (16%)
Query: 126 KMVNFFHI-MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWL 183
K+V H M+ G + + N ++K LC+ + A ++ + + + P+E + +
Sbjct: 171 KLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTI 230
Query: 184 IKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR---- 239
++GY + GDL A +I M + G S V+ ++ F K + ++A+ Q M
Sbjct: 231 MQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDG 290
Query: 240 ------------------------VKRMD-------DLGLSTYRIVIDWMCKRGKISQAY 268
++ MD D + TY VI +CK G++ +A
Sbjct: 291 FFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAV 350
Query: 269 TMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGL 324
L++M R + +T +++I L ++ EA ++ + PD+ ++ LI+GL
Sbjct: 351 EFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 410
Query: 325 LRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR--------------KGPDP 370
R R A ++F EM +GCEP TY ML+ L +G+
Sbjct: 411 CLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDS-LCSKGKLDEALNMLKQMELSGCARS 469
Query: 371 LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
++ ++T+ + G KA K +A + + + GV YN +
Sbjct: 470 VITYNTL-IDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLI 512
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 112/267 (41%), Gaps = 38/267 (14%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVN 129
+ NS+T+N ++D + KSR ++ + + +M DK T+ L ++KK +
Sbjct: 502 SRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAAD 561
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCD 189
M GCE P+ + YG LI G C
Sbjct: 562 IVQAMTSNGCE----------------------------------PDIVTYGTLISGLCK 587
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
G + ASK+ + +G + + +I+ F+ K EA+ +F+ M +
Sbjct: 588 AGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAV 647
Query: 250 TYRIVIDWMCK-RGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
+YRIV +C G I +A L E+ ++G + +L + GLL K+V
Sbjct: 648 SYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNM 707
Query: 309 I-EKPDISLYH-GLIKGLLRLRRAREA 333
+ +K S ++KGLL++R+ ++A
Sbjct: 708 VMQKARFSEEEVSMVKGLLKIRKFQDA 734
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 116/260 (44%), Gaps = 30/260 (11%)
Query: 202 LMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL----STYRIVIDW 257
++ D G +P ++M+ D +K+ ++ K M G+ ST+ ++I
Sbjct: 144 MIDDFGLKPDTHFYNRMLNLLV----DGNNLKLVEIAHAK-MSVWGIKPDVSTFNVLIKA 198
Query: 258 MCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK-----P 312
+C+ ++ A MLE+M G+ D T ++I+ G + G L A ++ E++ +
Sbjct: 199 LCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWS 258
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKR-GCEPTMHTYIMLLQGHLGKRG------- 364
++S+ + ++ G + R +A +EM + G P +T+ L+ G L K G
Sbjct: 259 NVSV-NVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNG-LCKAGHVKHAIE 316
Query: 365 ------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYS 418
++G DP V + GL K G+ +A +++++++ R YN +
Sbjct: 317 IMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLC 376
Query: 419 NEEGVVMFEEVGKKLREVGL 438
E V E+ + L G+
Sbjct: 377 KENQVEEATELARVLTSKGI 396
>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 579
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 126/221 (57%), Gaps = 7/221 (3%)
Query: 149 VVKTLCQ-RKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEG 207
+V LC+ RK L + + + +KPN + YG ++ GYC V + +A I+N+M EG
Sbjct: 188 LVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEG 247
Query: 208 FEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQA 267
EP++ + +I K + DEAM +F+ M K+++ + TY I+ID +CK GKIS +
Sbjct: 248 VEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINP-DVVTYNILIDGLCKLGKISTS 306
Query: 268 YTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKG 323
+++EM G D +T +S+++ L L +A +V+EI+ +P++ Y LI G
Sbjct: 307 LELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDG 366
Query: 324 LLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
L + R +A +F+E++ G T+ TY +++ G L K+G
Sbjct: 367 LCKDGRLEDAYVIFQEILTEGYHITVWTYNVMING-LCKKG 406
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 90/428 (21%), Positives = 193/428 (45%), Gaps = 43/428 (10%)
Query: 57 YLFFQYTQKAQPCFAHNSITFNRMVD---IIGKSRNIDLFWETLQEMGRRRLVNDKTFKI 113
+LF T+ + + NSITF ++ + G++ LF + + G + ++ ++ I
Sbjct: 63 FLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFK--LDQVSYAI 120
Query: 114 ALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEW 172
+ L ++ E + + ++ + M + ++ +LC+ K V +A L ++ ++
Sbjct: 121 LMNGLCKMGETRAAM---QMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKG 177
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
I PN + L+ C +A + +M +G +P++ +++ + +N+ ++A+
Sbjct: 178 IFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKAL 237
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
+F +M V+ + + Y I+I+ +CK+ ++ +A + +EM + I D +T + +I G
Sbjct: 238 NIFNVM-VQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDG 296
Query: 293 LLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
L G++ + ++V+E+ + DI Y+ L+ L + +A + +E+ +G +P
Sbjct: 297 LCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPN 356
Query: 349 MHTYIMLLQGHLGKRGRKGPDPLVNFDTIF--------------VGGLVKAGKSLDAAKY 394
+ TY L+ G L K GR D V F I + GL K G +A
Sbjct: 357 VCTYTTLIDG-LCKDGRL-EDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALAL 414
Query: 395 VERVMNRGVEVPRFDYNKFLHYYSNEEGVV-------------MFEEVGKKLREVGLADL 441
+ R+ + Y ++ S + V + + + KK+ +ADL
Sbjct: 415 LSRMEDNACIPDAVSYETIIYALSEKGETVKTNKLLCAMIVRGLSKRLKKKVNMTTIADL 474
Query: 442 ADIFQRYG 449
D + Y
Sbjct: 475 NDKWAAYA 482
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 118/292 (40%), Gaps = 51/292 (17%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEP-SIDVV---------------- 215
IKP+ + L+ YC G + I + G+EP SI
Sbjct: 41 IKPSIVTLTILMNCYCHTGGITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEAL 100
Query: 216 ---DKMIETFFKIN------------KDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCK 260
D ++ FK++ K E QM+R K + + Y +ID +CK
Sbjct: 101 LFHDHVVAHGFKLDQVSYAILMNGLCKMGETRAAMQMLR-KTWVNADVVMYSTIIDSLCK 159
Query: 261 RGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISL 316
++ AY + EM +GI + T S ++ L + ++A ++ + KP++
Sbjct: 160 GKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVT 219
Query: 317 YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR----------- 365
Y ++ G + + +A +F M++ G EP + Y +++ G L K+ R
Sbjct: 220 YGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIING-LCKKKRVDEAMNLFKEM 278
Query: 366 --KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
K +P V I + GL K GK + + V+ + + G V YN LH
Sbjct: 279 HWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLH 330
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 133/272 (48%), Gaps = 8/272 (2%)
Query: 94 WETLQEMGRRRLVNDKTFKIALMTLA-EVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKT 152
++ L EM R D +L+ L + + + F M + GC +++
Sbjct: 303 YQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQN 362
Query: 153 LCQRKLVVEAKYLILKL--SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEP 210
+ VEA IL+L + P+ AY L+ GY + + +A +++ M G +P
Sbjct: 363 F-SKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKP 421
Query: 211 SIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTM 270
+ + ++ FK K D A +F+ M K L +Y I+ID + K G++S+A+
Sbjct: 422 NAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQ 481
Query: 271 LEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLR 326
+EM RGI + T +S+IY L GR+ EA K+VE++ K PD+ Y LI GL+
Sbjct: 482 FQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLID 541
Query: 327 LRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
A VF+EM+KRGC P TY +L +G
Sbjct: 542 SSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRG 573
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 163/352 (46%), Gaps = 24/352 (6%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKT-FKIALMTLAEVRELKKMVNFF 131
N + + ++D + K+ I+ + +EM V +T + + + L + + L F
Sbjct: 142 NVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVF 201
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDV 190
M GC ++ + + EA+ L+ + L++ +P + YG ++ G+C +
Sbjct: 202 EQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKL 261
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR-MDDLGLS 249
+ EA ++ M + G EP + + ++ + + +EA +V M + D+ L
Sbjct: 262 DMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVIL- 320
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
Y +ID + G++ +A + + M ++G D LT +II G + A +++E +
Sbjct: 321 -YTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELM 379
Query: 310 EK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL--GKR 363
K PD Y+ L+ G ++L R +A V+ M+ G +P T+ +L+ G GK
Sbjct: 380 AKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKT 439
Query: 364 GR------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
R + P LV++ TI + GL KAG+ +A + +++RG+
Sbjct: 440 DRAFSLFKEMLEKEEVPPTLVSY-TILIDGLGKAGRVSEAFLQFQEMIDRGI 490
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/358 (21%), Positives = 145/358 (40%), Gaps = 51/358 (14%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
++ + LA + ++ + FF+ M D GCE + ++ C+ L+ +
Sbjct: 9 SYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKLLNQA 68
Query: 170 SEWIKPNEIAYGWLIKGYCDVGDLI--------------------------------EAS 197
+ +P+ Y +I GYC GDL EA
Sbjct: 69 LKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADSKRIDEAC 128
Query: 198 KIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDW 257
+++ + G P++ +I+ K + ++ +K F+ M +TY +VID
Sbjct: 129 ELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPT-RTTYTVVIDG 187
Query: 258 MCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPD 313
+CK + A + E+M ++G D +T +++I G ++ EA K+++ + +P
Sbjct: 188 LCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPT 247
Query: 314 ISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR-------- 365
Y ++ G +L EA +V +M +RGCEP + + LL +L K GR
Sbjct: 248 AVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSK-GRAEEAYQVL 306
Query: 366 -----KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYS 418
+G P V T + L G+ +A + ++ +G Y + +S
Sbjct: 307 TEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFS 364
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 120/282 (42%), Gaps = 25/282 (8%)
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
+P ++Y +I G + + EA K +N M D G EP + +I F K + K
Sbjct: 4 EPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHK 63
Query: 234 VFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
+ + D+ L Y VI CK G + Y D ++ +++I GL
Sbjct: 64 LLNQALKRFRPDVFL--YTSVIHGYCKAGDLDTGYF---RAVTPKASLDVISYTTVIKGL 118
Query: 294 LARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
R+ EA ++ EE++ P++ Y +I GLL+ R + + F EM C PT
Sbjct: 119 ADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTR 178
Query: 350 HTYIMLLQGHLGKRGRKGPDPLVNFD--------------TIFVGGLVKAGKSLDAAKYV 395
TY +++ G + + PD F+ T + G KA K +A K +
Sbjct: 179 TTYTVVIDGLC--KAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLL 236
Query: 396 ERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVG 437
+ ++ +G E Y +H + + + +EV ++RE G
Sbjct: 237 DVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERG 278
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 99/227 (43%), Gaps = 19/227 (8%)
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQ 266
G EP+I + +I I+K DEA K F M + + + + +I CK G+
Sbjct: 2 GCEPTIVSYNTVISGLASIDKMDEAYKFFNSM-IDNGCEPDVIAFTTLIHGFCKAGQPQV 60
Query: 267 AYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY-KVVEEIEKPDISLYHGLIKGLL 325
+ +L + KR D +S+I+G G L Y + V D+ Y +IKGL
Sbjct: 61 GHKLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLA 119
Query: 326 RLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFD---------- 375
+R EA ++F E+ GC P + Y ++ G L K GR D L NF+
Sbjct: 120 DSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLL-KAGRI-EDGLKNFEEMSGSSCVPT 177
Query: 376 ----TIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYS 418
T+ + GL KA DA K E+++ +G Y + +S
Sbjct: 178 RTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFS 224
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 95/231 (41%), Gaps = 4/231 (1%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVN 129
A +++T+ ++ K N++ E L+ M + + D +LM ++ + +
Sbjct: 350 APDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFG 409
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL--SEWIKPNEIAYGWLIKGY 187
+ M G + + N ++ L + A L ++ E + P ++Y LI G
Sbjct: 410 VYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGL 469
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
G + EA + M D G P +I + K + EA K+ + M VK +
Sbjct: 470 GKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDM-VKLGVNPD 528
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR 298
+ Y +I + + A+ + +EM KRG + +T + G A GR
Sbjct: 529 VQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGR 579
>gi|326531326|dbj|BAK05014.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 537
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 171/368 (46%), Gaps = 18/368 (4%)
Query: 52 SWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRR---LVND 108
+W+ LFF + P + H T+ M+DI+G+ + + L + E+ +R +V +
Sbjct: 125 NWQVALLFFTWAA-GLPTYEHGPRTYIEMLDILGRMKKVRLMRQLFDEIPEQRRGLVVTN 183
Query: 109 KTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK 168
+ F + L A ++++ + F+ ND G E L ++ +LC+ K V EA+ L L+
Sbjct: 184 RMFAVLLNRYAGAHKVQEAIEIFYKRNDYGFEVDLVGFQILLMSLCRYKHVEEAEALFLQ 243
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
+ P ++ ++ G+C G L +A ++WN + +P + I K K
Sbjct: 244 KKDEFPPVIKSWNIILNGWCVKGSLPDAKRVWNEIIASKLKPDLFTYGTFINALTKAGKL 303
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
A+K+F M K ++ ++ +ID +C + KI +A + EM RG +AD T ++
Sbjct: 304 STAVKLFTSMWEKGINP-DVAICNCIIDQLCFKKKIPEALKIFGEMNDRGCQADVATYNT 362
Query: 289 IIYGLLARGRLREAYKVVEEIEKPDISLYHGLIKGLLR-LRRAREATQVFREMIKRGCEP 347
+I R + Y++++++EK S + +L+ + R+ + + M + GC+
Sbjct: 363 LIKHFCKIRRTEKVYELLDDMEKKGCSPNNMTYTYILKTTEKPRDVMNLIQRMEESGCKL 422
Query: 348 TMHTYIMLLQGHLGKR------------GRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYV 395
TY ++L ++ + R G P TI V GL G+ A +Y
Sbjct: 423 DSDTYNLILNLYVSMKYEKGVQQVWEEMERNGSGPDQRSFTIMVHGLHSQGQLDQALQYY 482
Query: 396 ERVMNRGV 403
+ +RG+
Sbjct: 483 TTMKSRGM 490
>gi|356560073|ref|XP_003548320.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Glycine max]
Length = 466
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 171/377 (45%), Gaps = 34/377 (9%)
Query: 67 QPCFAHNSITFNRMVDIIGKSR----NIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVR 122
Q ++H +N M+DI+ +R + + L+ M R N T + ++ + +
Sbjct: 50 QEDYSHEPCAYNDMMDILSSTRYKVKQFRIVCDVLEYMKRN---NKTTVPVEVLLVILRK 106
Query: 123 ELKKMVNFFHIMN-------DCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKP 175
+K + H+ + + N ++ LC+ LV +A+ L K+ + +KP
Sbjct: 107 YTEKYLT--HVQKFARKRRIRVKTQPEINAFNLLLDALCKCCLVEDAETLYKKMRKTVKP 164
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
N Y + G+C V + K+ M + G P + I+T+ K EA+ +F
Sbjct: 165 NAETYNIFVFGWCRVRNPTRGMKLLEEMVELGHRPDNFAYNTAIDTYCKAGMVTEAVDLF 224
Query: 236 QMMRVK--RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
+ MR K + TY I+I + + ++ + + ++ M G D T II G+
Sbjct: 225 EFMRTKGSSISSPTAKTYAIIIVALAQHDRMEECFKLIGHMISSGCLPDVTTYKEIIEGM 284
Query: 294 LARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
G++ EAYK +EE+ +PDI Y+ +K L +++ +A +++ MI+ C P++
Sbjct: 285 CVCGKIDEAYKFLEEMGNKSYRPDIVTYNCFLKVLCDNKKSEDALKLYGRMIELNCIPSV 344
Query: 350 HTYIMLLQGHL------------GKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVER 397
TY ML+ + +G P ++ ++ + GL K DA +E
Sbjct: 345 QTYNMLISMFFEIDDPDGAFETWQEMDNRGCRPDIDTYSVMIDGLFNCNKVEDACFLLEE 404
Query: 398 VMNRGVEVPRFDYNKFL 414
V+N+G+++P ++ FL
Sbjct: 405 VINKGIKLPYKKFDSFL 421
>gi|356534319|ref|XP_003535704.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Glycine max]
Length = 507
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/415 (23%), Positives = 195/415 (46%), Gaps = 24/415 (5%)
Query: 11 VCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCF 70
+C IL +P S + + L++ + E L++ N + FF++ +K Q F
Sbjct: 61 ICRIL---STTPASTVDACLAAVPAKPSPELVLEVLNKLSNAGVLALSFFRWAEK-QSEF 116
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNF 130
H + F+ +++ +GK R + W + +M +R+L+ TF + A R+ K+ +
Sbjct: 117 KHTTEAFHALIEALGKIRQFKMIWTLVNDMKQRKLLTSDTFSLVARRYARARKAKEAIKT 176
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCD 189
F M G + + NK+V LC+ K V EA + K+ + + P+ +Y L++G+
Sbjct: 177 FEKMEHYGLKPHVSDFNKLVDVLCKSKSVEEAHEVFDKMRKLRLDPDIKSYTILLEGWSQ 236
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
+LI+ +++ M D+GF+ + ++ K K DEA+ ++ M+ + +
Sbjct: 237 QQNLIKVNEVCREMEDKGFQLDVVAYGIIMNAHCKAKKFDEAIGLYHEMKARGVRP-SPH 295
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
Y +I+ + ++ +A E G + T ++++ R+ +AY++V E+
Sbjct: 296 VYCTLINGLGSDKRLDEALEFFEVSKASGFVPEAPTYNAVVGAYCWSLRMDDAYRMVGEM 355
Query: 310 EK----PDISLYHGLIKGLLRLRRAREATQVFREMI--KRGCEPTMHTYIMLLQGHLGKR 363
+K P+ + ++ L++ RR EA+ VFR M + GCEP++ TY ++++ +
Sbjct: 356 KKCGIGPNSRTFDIVLHHLIKGRRIEEASSVFRRMNGGEFGCEPSVSTYEIMVRMFCNEE 415
Query: 364 ------------GRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
KG P ++ + V L K +A KY + +++ G+ P
Sbjct: 416 LLDMAVAVWDEMKGKGILPGMHMFSTLVCALCHESKLDEACKYFQEMLDVGIRPP 470
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 83/201 (41%), Gaps = 12/201 (5%)
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPN 176
L + L + + FF + G N VV C + +A ++ ++ + I PN
Sbjct: 304 LGSDKRLDEALEFFEVSKASGFVPEAPTYNAVVGAYCWSLRMDDAYRMVGEMKKCGIGPN 363
Query: 177 ----EIAYGWLIKGYCDVGDLIEASKIWNLMT--DEGFEPSIDVVDKMIETFFKINKDDE 230
+I LIKG + EAS ++ M + G EPS+ + M+ F D
Sbjct: 364 SRTFDIVLHHLIKGR----RIEEASSVFRRMNGGEFGCEPSVSTYEIMVRMFCNEELLDM 419
Query: 231 AMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
A+ V+ M+ K + G+ + ++ +C K+ +A +EM GI S++
Sbjct: 420 AVAVWDEMKGKGILP-GMHMFSTLVCALCHESKLDEACKYFQEMLDVGIRPPAKMFSTLK 478
Query: 291 YGLLARGRLREAYKVVEEIEK 311
L+ G A +I+K
Sbjct: 479 EALVDAGMEHVAMHFTLKIDK 499
>gi|125524449|gb|EAY72563.1| hypothetical protein OsI_00429 [Oryza sativa Indica Group]
Length = 535
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/413 (22%), Positives = 191/413 (46%), Gaps = 20/413 (4%)
Query: 7 HLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKA 66
H+ + IL + +S L L+ + + + L++ +W+ FF++
Sbjct: 82 HVSEIVKIL--KSRDGDSELAEVLNQFSDEMDEDVVLKVLQKQRSNWKVALSFFKWAA-G 138
Query: 67 QPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEM---GRRRLVNDKTFKIALMTLAEVRE 123
P + H S + M+DI+G+ + + L + E+ R+ ++ ++ F + L A +
Sbjct: 139 LPQYNHGSRAYTEMLDILGRMKKVRLMRQLFDEIPMESRQSVITNRMFAVLLNRYAGAHK 198
Query: 124 LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWL 183
+++ ++ F+ D G E L ++ +LC+ K V EA+ L L+ + P ++ +
Sbjct: 199 VQEAIDMFYKRKDYGFELDLVGFQILLMSLCRYKHVEEAEALFLQKKDEFPPVIKSWNII 258
Query: 184 IKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM 243
+ G+C G L +A ++WN + +P + I + K K A+K+F M K +
Sbjct: 259 LNGWCVKGSLADAKRVWNEIIASKLKPDLFTYGTFINSLTKSGKLSTAVKLFTSMWEKGI 318
Query: 244 DDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
+ ++ +ID +C + +I +A + EM RG +AD T +++I R+ + Y
Sbjct: 319 NP-DVAICNCIIDQLCFKKRIPEALEIFGEMNDRGCQADVATYNTLIKHFCKINRMEKVY 377
Query: 304 KVVEEIEKPDISLYHGLIKGLLR-LRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG- 361
++++++E +S + +L+ + ++ + + M K GC TY ++L ++
Sbjct: 378 ELLDDMEVKGVSPNNMTYSYILKTTEKPKDVISLMQRMEKSGCRLDSDTYNLILNLYVSW 437
Query: 362 --KRG---------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
++G R G P TI V GL GK +A Y + +RG+
Sbjct: 438 DYEKGVQLVWDEMERNGSGPDQRSFTIMVHGLHSHGKLDEALHYYRTMESRGM 490
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 134/272 (49%), Gaps = 8/272 (2%)
Query: 94 WETLQEMGRRRLVNDKTFKIALMTLA-EVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKT 152
++ L EM R D +L+ L + + + F M + GC +++
Sbjct: 558 YQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQN 617
Query: 153 LCQRKLVVEAKYLILKL--SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEP 210
+ VEA IL+L + P+ AY L+ GY + + +A +++ M G +P
Sbjct: 618 F-SKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKP 676
Query: 211 SIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTM 270
+ + ++ FK K D A +F+ M K L +Y I+ID + K G++S+A++
Sbjct: 677 NAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQ 736
Query: 271 LEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLR 326
+EM RGI + T +S+IY L GR+ EA K+VE++ K PD+ Y LI GL+
Sbjct: 737 FQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLID 796
Query: 327 LRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
A VF+EM+KRGC P TY +L +G
Sbjct: 797 SSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRG 828
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 175/392 (44%), Gaps = 48/392 (12%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
++ + ++D + K +D +E + M + + D TF + L+ +L + +
Sbjct: 158 DAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELY 217
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
M + G E LE+ + ++ LC+ V EA + + ++ + + +AY L+ GYC +
Sbjct: 218 REMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKL 277
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR----------- 239
G + + K+ M + P I + ++ F + N+ D+A+++F+++
Sbjct: 278 GRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATY 337
Query: 240 ---------VKRMDD--------LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEAD 282
+RM++ L + +Y VI + +I +A + E++ G +
Sbjct: 338 TTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPN 397
Query: 283 NLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFR 338
+ +++I GLL GR+ + K E++ P + Y +I GL + + +A +VF
Sbjct: 398 VVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFE 457
Query: 339 EMIKRGCEPTMHTYIMLLQGH------------LGKRGRKGPDPL-VNFDTIFVGGLVKA 385
+M+++GC P TY L+ G L KGP+P V + +I V G K
Sbjct: 458 QMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSI-VHGFCKL 516
Query: 386 GKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
+A + + ++ RG E F + L YY
Sbjct: 517 DMINEAKEVIAQMRERGCEPGLFIFTSLLSYY 548
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 160/366 (43%), Gaps = 25/366 (6%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVN 129
A + + +N ++D K +D + L +M D +T+ I + + L +
Sbjct: 261 ATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALE 320
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCD 189
F +++ GC+ + +++ L + + EAK E + + I+Y +IKG D
Sbjct: 321 LFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAF---FDEAL--DVISYTTVIKGLAD 375
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
+ EA +++ + G P++ +I+ K + ++ +K F+ M +
Sbjct: 376 SKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPT-RT 434
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
TY +VID +CK + A + E+M ++G D +T +++I G ++ EA K+++ +
Sbjct: 435 TYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVM 494
Query: 310 ----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
+P Y ++ G +L EA +V +M +RGCEP + + LL +L K GR
Sbjct: 495 LTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSK-GR 553
Query: 366 -------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNK 412
+G P V T + L G+ +A + ++ +G Y
Sbjct: 554 AEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGT 613
Query: 413 FLHYYS 418
+ +S
Sbjct: 614 IIQNFS 619
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 138/337 (40%), Gaps = 45/337 (13%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEV 121
+T P + +I N + + I+LF E + MG + ++ + LA +
Sbjct: 12 HTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLE-MPSMGCEPTI--VSYNTVISGLASI 68
Query: 122 RELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYG 181
++ + FF+ M D GCE + ++ C+ L+ + + +P+ Y
Sbjct: 69 DKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFRPDVFLYT 128
Query: 182 WLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK 241
+I GYC GDL KI M G P +I+ K+ + DEA ++F+ MR
Sbjct: 129 SVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMR-- 186
Query: 242 RMDDLG-LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
+ LG T+ +I+ + GK+ +A + EM +RG E S+I+ L G++
Sbjct: 187 KSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVD 246
Query: 301 EAYKVVEEIEK---------------------------------------PDISLYHGLI 321
EA ++ + + PDI Y+ L+
Sbjct: 247 EANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILV 306
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
G R R +A ++F+ + GC+P TY ++QG
Sbjct: 307 AGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQG 343
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 158/348 (45%), Gaps = 22/348 (6%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIM 134
T+ ++D + K++ + + ++M ++ V D T+ + ++ ++ + +M
Sbjct: 435 TYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVM 494
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDL 193
G E + +V C+ ++ EAK +I ++ E +P + L+ Y G
Sbjct: 495 LTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRA 554
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
EA ++ MT G P + + +I+ F + EA VF M K L TY
Sbjct: 555 EEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDAL-TYGT 613
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE--- 310
+I K G + A +LE M K G+ D +S++ G + R+ +A+ V + +
Sbjct: 614 IIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASG 673
Query: 311 -KPDISLYHGLIKGLLRLRRAREATQVFREMIKRG-CEPTMHTYIMLLQGHLGKRGR--- 365
KP+ ++ L+ GL + + A +F+EM+++ PT+ +Y +L+ G LGK GR
Sbjct: 674 IKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDG-LGKAGRVSE 732
Query: 366 ----------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
+G P + T + L KAG+ +A K VE ++ GV
Sbjct: 733 AFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGV 780
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 95/231 (41%), Gaps = 4/231 (1%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVN 129
A +++T+ ++ K N++ E L+ M + + D +LM ++ + +
Sbjct: 605 APDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFG 664
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE--WIKPNEIAYGWLIKGY 187
+ M G + + N ++ L + A L ++ E + P ++Y LI G
Sbjct: 665 VYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGL 724
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
G + EA + M D G P +I + K + EA K+ + M VK +
Sbjct: 725 GKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDM-VKLGVNPD 783
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR 298
+ Y +I + + A+ + +EM KRG + +T + G A GR
Sbjct: 784 VQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGR 834
>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial [Vitis vinifera]
Length = 876
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 179/382 (46%), Gaps = 28/382 (7%)
Query: 60 FQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTL 118
F+ K + C NS+T++ ++ + ++ ++ ++ QEM + + +T+ + +
Sbjct: 229 FEKMSKEENCRP-NSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAK 287
Query: 119 AEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNE 177
++ K + M C ++ ++ LC+ + EA + K L + P
Sbjct: 288 CDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGI 347
Query: 178 IAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQM 237
I + LI GYC G ++ A ++ ++M +P+I ++++E +++K + K F +
Sbjct: 348 ITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSK---SYKAFLL 404
Query: 238 MRVKRMDDLGL----STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
+R R+ D GL TY I++D CK G+++ A+ + M G+E D T +++I GL
Sbjct: 405 LR--RVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGL 462
Query: 294 LARGRLREAYKVVEEIEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
GRL +A ++ + K ISL + LI G ++ +A++ +F M++ C T
Sbjct: 463 CKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTA 522
Query: 350 HTYIMLL------------QGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVER 397
HT+ L LGK + G P V TI + G +AG++ + K +ER
Sbjct: 523 HTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLER 582
Query: 398 VMNRGVEVPRFDYNKFLHYYSN 419
+ G + Y ++ N
Sbjct: 583 MKQAGCSPNVYTYTIIINGLCN 604
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 107/239 (44%), Gaps = 18/239 (7%)
Query: 203 MTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRG 262
MT+ GF S ++ K+N A V++ M V LG YR V++ +CK G
Sbjct: 127 MTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRM-VNEGFVLGGIDYRTVVNALCKNG 185
Query: 263 KISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK-----PDISLY 317
+ A ++ + G D +S++ R L EA++V E++ K P+ Y
Sbjct: 186 FVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTY 245
Query: 318 HGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------------LGKRGR 365
LI GL R EA Q+ +EM+++GC+P+ TY +L++ L +
Sbjct: 246 SILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMAT 305
Query: 366 KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVV 424
K P V+ TI + L + GK +A +++ G+ +N ++ Y E VV
Sbjct: 306 KACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVV 364
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 114/302 (37%), Gaps = 82/302 (27%)
Query: 103 RRLVNDK------TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQR 156
RR+V++ T+ I + + +L N F+ MN G E ++ LC+
Sbjct: 406 RRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKL 465
Query: 157 KLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGD----------------------- 192
+ +A ++ + + I +E+ + LI G+C +G
Sbjct: 466 GRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTF 525
Query: 193 ------------LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
L EA+ + M G PS+ +IE + + ++K+ +
Sbjct: 526 NCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLE---- 581
Query: 241 KRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR 296
RM G S TY I+I+ +C G++ +A T+L M G+ ++ T + ++ +
Sbjct: 582 -RMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKA 640
Query: 297 GRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
GRL A+++V M+K GC+P H Y LL
Sbjct: 641 GRLDRAFQIVS-------------------------------TMVKNGCQPNSHIYSALL 669
Query: 357 QG 358
G
Sbjct: 670 SG 671
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 111/277 (40%), Gaps = 39/277 (14%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIM 134
TFN +D +GK ++ L +M + LV T I + E + M
Sbjct: 524 TFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERM 583
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDL 193
GC ++ ++ LC V EA+ ++ +S + + PN Y L+K + G L
Sbjct: 584 KQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRL 643
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
A +I + M G +P+ + ++ F N A+ + +D LS+
Sbjct: 644 DRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNT---AIGARALSSTGDLDARSLSSE-- 698
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK-- 311
E DN LSS ++ L+ + A K+ +EI+K
Sbjct: 699 --------------------------ENDNNCLSSHVFRLM---DVDHALKIRDEIKKCG 729
Query: 312 -PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
P LY+ L+ GL + R EA Q+ ++M+K G P
Sbjct: 730 VPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFP 766
>gi|359496995|ref|XP_003635394.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Vitis vinifera]
Length = 622
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 153/347 (44%), Gaps = 41/347 (11%)
Query: 57 YLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRR--RLVNDKTFKIA 114
Y FF + K QP + H+ + M+ I+GK R W ++EM R + V+ F +
Sbjct: 106 YRFFVWASK-QPGYRHSYEVYKAMIKILGKMRQFGAVWALIEEMRRENPQFVSPYVFVVL 164
Query: 115 LMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIK 174
+ A R +KK + M GCE + ++ LC+ V EA L +
Sbjct: 165 MRRFASARMVKKAIEVLDEMPKYGCEPDEHVFGCLLDALCKNGSVKEAASLFEDMRIRFT 224
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P + L+ G+C G L+EA + + + GFEP I V + ++ + K +A +
Sbjct: 225 PTLKHFTSLLYGWCREGKLMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMVDAYDL 284
Query: 235 FQMMRVKRMDDLGLS----------------------------------TYRIVIDWMCK 260
+ MR K + +S TY +I CK
Sbjct: 285 LKEMRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCK 344
Query: 261 RGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISL 316
GKIS+ Y +L+ M ++G + +T I+ + L E +++EE+ K PD+++
Sbjct: 345 WGKISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTPDLNI 404
Query: 317 YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
Y+ +I+ +L +E +V+ EM G P + T+++++ G L +R
Sbjct: 405 YNIVIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQR 451
>gi|356560394|ref|XP_003548477.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Glycine max]
Length = 612
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 159/352 (45%), Gaps = 49/352 (13%)
Query: 11 VCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCF 70
+ I+++ P S++ L C+ L+ E +++ + W + FF + K QP +
Sbjct: 131 ILAIMHEVGSGP-SQIKQKLEHCSIVLSPELVVEVLSRTRNDWEAAFTFFLWAGK-QPGY 188
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEM--GRR--RLVNDKTFKIALMTLAEVRELKK 126
AH+ ++ M+ I+GK R D W ++EM GR LV +T I + V ++ +
Sbjct: 189 AHSVREYHSMISILGKMRKFDTAWNLIEEMRGGRNGLSLVTPQTLLIMIRKYCAVHDVAR 248
Query: 127 MVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKG 186
+N F+ LE + ++ LC+ K V +A+YL+ + + ++ ++ G
Sbjct: 249 AINTFYAYKRFNFRVGLEEFHSLLSALCRYKNVQDAEYLLFCNKDVFPLDTKSFNIILNG 308
Query: 187 YCD-VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD 245
+C+ + A +IW+ M +KR
Sbjct: 309 WCNLIVSTSHAERIWHEM------------------------------------IKRRIQ 332
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL-REAYK 304
+ +Y +I K K+ + M +EM KR I D +++IY LA+GRL +EA
Sbjct: 333 HDVVSYGSIISCYSKSSKLYKVLRMFDEMKKRKITPDRKVYNAVIYA-LAKGRLVKEAVN 391
Query: 305 VVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
++ +E PD+ Y+ LIK L + + EA Q+F EM+KR PT+ T+
Sbjct: 392 LIGTMEGNDVTPDVVTYNSLIKPLCKAHKVDEAKQLFDEMLKRHLSPTIQTF 443
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 132/296 (44%), Gaps = 38/296 (12%)
Query: 26 LHSSLSS-CNF-NLTHEFFLQICNN--FPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMV 81
HS LS+ C + N+ +L CN FPL + +I N
Sbjct: 268 FHSLLSALCRYKNVQDAEYLLFCNKDVFPLDTKSF-----------------NIILNGWC 310
Query: 82 DIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIMNDCGCE 140
++I + + + W EM +RR+ +D ++ + ++ +L K++ F M
Sbjct: 311 NLIVSTSHAERIW---HEMIKRRIQHDVVSYGSIISCYSKSSKLYKVLRMFDEMKKRKIT 367
Query: 141 YSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKI 199
++ N V+ L + +LV EA LI + + P+ + Y LIK C + EA ++
Sbjct: 368 PDRKVYNAVIYALAKGRLVKEAVNLIGTMEGNDVTPDVVTYNSLIKPLCKAHKVDEAKQL 427
Query: 200 WNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL----GLSTYRIVI 255
++ M P+I + FF+I + E +VF+++ +M +L + TY ++I
Sbjct: 428 FDEMLKRHLSPTI----QTFHAFFRILRTKE--EVFELL--DKMKELRCYPTIETYIMLI 479
Query: 256 DWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK 311
C+ ++ + + + M + I D + +I+GL G+L EA + E+++
Sbjct: 480 RKFCRWCQLDDVFKIWDAMREDEISHDRSSYIVLIHGLFLNGKLEEAQRYYAEMQE 535
>gi|356531098|ref|XP_003534115.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Glycine max]
Length = 466
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 177/401 (44%), Gaps = 29/401 (7%)
Query: 67 QPCFAHNSITFNRMVDIIGKSR----NIDLFWETLQEMGR--RRLVNDKTFKIALMTLAE 120
Q ++H +N M+DI+ +R + + L+ M R R +V + + L E
Sbjct: 50 QEDYSHEPCAYNDMMDILSSTRYKVKQFRIVCDVLEYMKRNNRTMVPAEVLLVILRKYTE 109
Query: 121 VRELKKMVNFFHIMN-DCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIA 179
+ L M F + + N ++ LC+ LV +A+ L K+ + +KPN
Sbjct: 110 -KYLTHMQKFAKKKRIRVKTQLEINAFNLLLDALCKCCLVEDAESLYKKMRKTVKPNAET 168
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
Y L+ G+C V + K+ M + G P + I+T+ K EA+ +F+ MR
Sbjct: 169 YNILVFGWCRVRNPTRGMKLLEEMIELGHRPDNFTYNTAIDTYCKTGMITEAVDLFEFMR 228
Query: 240 VK--RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
K + TY I+I + + ++ + ++ M G D T II G+ G
Sbjct: 229 TKGSTISSPTAKTYAIIIVALAQHDRMEDCFKLIGHMISSGCLPDVTTYKEIIEGMCMCG 288
Query: 298 RLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYI 353
++ EAYK +EE+ +PDI Y+ +K L +++ +A +++ MI+ C P++ TY
Sbjct: 289 KIDEAYKFLEEMGNKSYRPDIVTYNCFLKVLCDNKKSEDALKLYGRMIELNCIPSVQTYN 348
Query: 354 MLLQGHL------------GKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNR 401
ML+ + +G P + + + GL K DA +E V+N
Sbjct: 349 MLISMFFEMDDPDGAFETWQEIDNRGCRPDTDTYCVMIEGLFNCNKMEDACFLLEEVINE 408
Query: 402 GVEVPRFDYNKFLHYYS---NEEGVVMFEEVGKKLREVGLA 439
GV++P ++ FL S + + + E KK G+A
Sbjct: 409 GVKLPYKKFDSFLMQLSVIGDLQAIHRLSEHMKKFYNHGMA 449
>gi|297842515|ref|XP_002889139.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334980|gb|EFH65398.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 482
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/399 (22%), Positives = 185/399 (46%), Gaps = 19/399 (4%)
Query: 21 SPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRM 80
SP+ + S+L ++ E + F + Y FFQ+++K Q + H+ ++ M
Sbjct: 47 SPQLVIDSALDQSGLRVSPEVVEDVLYRFRNAGLLAYRFFQWSEK-QRHYEHSVRAYHMM 105
Query: 81 VDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCE 140
++ K R L W+ + M +++++N +TF I + A +++ + + F++M
Sbjct: 106 IESTAKIRQYKLMWDLINAMMKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLP 165
Query: 141 YSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIW 200
+L N ++ LC+ K V +A+ + + + P+ Y L++G+ +L +A +++
Sbjct: 166 PNLVAFNGLLSALCKSKNVRKAQEIFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVF 225
Query: 201 NLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCK 260
M D G P I M++ K + DEA+ + + M Y +++
Sbjct: 226 REMVDAGSLPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTF-IYSVLVHTYGT 284
Query: 261 RGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISL 316
++ +A EM + G++AD +S+I R++ Y+V++E++ P+
Sbjct: 285 ETRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKTNRMKNVYRVLKEMKSKGVTPNSKS 344
Query: 317 YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG------------ 364
+ +++ L+ EA VFR+MIK CEP TY M+++ K+
Sbjct: 345 CNIILRHLIDRGEKDEAFDVFRKMIK-VCEPDADTYTMMIKMFCEKKEMETADKVWKYMR 403
Query: 365 RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
+KG P ++ ++ + GL + + A +E ++ G+
Sbjct: 404 KKGVFPSMHTFSVLINGLCEEPNTQKACVLLEEMIEMGI 442
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 105/228 (46%), Gaps = 8/228 (3%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTF--KIALMTLAEVRELKKMVNFFH 132
+T++ MVDI+ K+ +D ++ M + TF + + T L++ V+ F
Sbjct: 238 VTYSIMVDILCKAGRVDEALGIVRSMDPS-ICKPTTFIYSVLVHTYGTETRLEEAVDTFL 296
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK--LSEWIKPNEIAYGWLIKGYCDV 190
M G + + + N ++ C+ + Y +LK S+ + PN + +++ D
Sbjct: 297 EMERSGMKADVAVFNSLIGAFCKTNRMKNV-YRVLKEMKSKGVTPNSKSCNIILRHLIDR 355
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G+ EA ++ M + EP D MI+ F + + + A KV++ MR K + + T
Sbjct: 356 GEKDEAFDVFRKMI-KVCEPDADTYTMMIKMFCEKKEMETADKVWKYMRKKGVFP-SMHT 413
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR 298
+ ++I+ +C+ +A +LEEM + GI T + LL R
Sbjct: 414 FSVLINGLCEEPNTQKACVLLEEMIEMGIRPSGATFGRLRQLLLKEDR 461
>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 142/275 (51%), Gaps = 20/275 (7%)
Query: 147 NKVVKTLCQRKLVVEAK-YLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N +V LC+ V EAK L + L +KP+ I Y L+ GY V ++ +A ++N M+
Sbjct: 273 NILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSL 332
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKIS 265
G P + +I F K DEA+ +F+ M K M G+ TY +ID +CK G+I
Sbjct: 333 MGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVP-GIVTYSSLIDGLCKSGRIP 391
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLI 321
+ +++EM RG AD +T SS+I GL G L A + +++ +P+I + L+
Sbjct: 392 YVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILL 451
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------------LGKRGRKGPD 369
GL + R ++A +VF++++ +G ++TY +++ GH L K G
Sbjct: 452 DGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCI 511
Query: 370 P-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
P F+TI + L K ++ A K + +++ RG+
Sbjct: 512 PNAFTFETIII-ALFKKDENDKAEKLLRQMIARGL 545
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 140/313 (44%), Gaps = 19/313 (6%)
Query: 111 FKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-L 169
F L + A+++ V+ H + G + L LN ++ C + ++ K L
Sbjct: 62 FNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKIL 121
Query: 170 SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD 229
P+ + LIKG C G + +A + + +GF+ + +I KI
Sbjct: 122 KRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTR 181
Query: 230 EAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSI 289
A+K+ + + R+ + Y +ID +CK +S+AY + EM +GI AD +T S++
Sbjct: 182 GAIKLLRKID-GRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTL 240
Query: 290 IYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGC 345
IYG G+L+EA ++ E+ P++ Y+ L+ L + + +EA V M+K
Sbjct: 241 IYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACV 300
Query: 346 EPTMHTYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAK 393
+P + TY L+ G+ G P V+ TI + G K K +D A
Sbjct: 301 KPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCK-NKMVDEAL 359
Query: 394 YVERVMNRGVEVP 406
+ + M++ VP
Sbjct: 360 NLFKEMHQKNMVP 372
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 154/375 (41%), Gaps = 92/375 (24%)
Query: 146 LNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
LN ++K LC + V +A + KL ++ + N+++Y LI G C +GD A K+ +
Sbjct: 132 LNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKID 191
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM--------------------- 243
+P++++ +I+ K EA +F M VK +
Sbjct: 192 GRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLK 251
Query: 244 DDLGL-------------STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
+ +GL TY I++D +CK GK+ +A ++L M K ++ D +T S+++
Sbjct: 252 EAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLM 311
Query: 291 YGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
G +++A V + PD+ Y LI G + + EA +F+EM ++
Sbjct: 312 DGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMV 371
Query: 347 PTMHTYIMLLQGHLGKRGR-------------KG-PDPLVNFD----------------- 375
P + TY L+ G L K GR +G P ++ +
Sbjct: 372 PGIVTYSSLIDG-LCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIA 430
Query: 376 -----------------TIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYS 418
TI + GL K G+ DA + + ++ +G + + YN ++ +
Sbjct: 431 LFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHC 490
Query: 419 N----EEGVVMFEEV 429
EE + M ++
Sbjct: 491 KQGLLEEALTMLSKM 505
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 78/166 (46%), Gaps = 2/166 (1%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+T++ ++D + KS I W+ + EM R D T+ + L + L + + F+
Sbjct: 375 VTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNK 434
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGD 192
M D ++ ++ LC+ + +A+ + L++ N Y +I G+C G
Sbjct: 435 MKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGL 494
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
L EA + + M D G P+ + +I FK +++D+A K+ + M
Sbjct: 495 LEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQM 540
>gi|147767159|emb|CAN71515.1| hypothetical protein VITISV_021787 [Vitis vinifera]
Length = 655
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 153/347 (44%), Gaps = 41/347 (11%)
Query: 57 YLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRR--RLVNDKTFKIA 114
Y FF + K QP + H+ + M+ I+GK R W ++EM R + V+ F +
Sbjct: 139 YRFFVWASK-QPGYRHSYEVYKAMIKILGKMRQFGAVWALIEEMRRENPQFVSPYVFVVL 197
Query: 115 LMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIK 174
+ A R +KK + M GCE + ++ LC+ V EA L +
Sbjct: 198 MRRFASARMVKKAIEVLDEMPKYGCEPDEHVFGCLLDALCKNGSVKEAASLFEDMRIRFT 257
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P + L+ G+C G L+EA + + + GFEP I V + ++ + K +A +
Sbjct: 258 PTLKHFTSLLYGWCREGKLMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMVDAYDL 317
Query: 235 FQMMRVKRMDDLGLS----------------------------------TYRIVIDWMCK 260
+ MR K + +S TY +I CK
Sbjct: 318 LKEMRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCK 377
Query: 261 RGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISL 316
GKIS+ Y +L+ M ++G + +T I+ + L E +++EE+ K PD+++
Sbjct: 378 WGKISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTPDLNI 437
Query: 317 YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
Y+ +I+ +L +E +V+ EM G P + T+++++ G L +R
Sbjct: 438 YNIVIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQR 484
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 159/310 (51%), Gaps = 14/310 (4%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALMT 117
FFQ+ +Q + H ++++N +++++ KS D + T +M G + N T+ L +
Sbjct: 3 FFQWA-GSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRS 61
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWI---- 173
L + + ++ + F M GC ++ + ++ LC+ + V EA L L+E I
Sbjct: 62 LCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAEL---LNEMIDGGH 118
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
+PN + YG L+ G C +G L EA +++ M G P V + +I+ F K EA +
Sbjct: 119 QPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYR 178
Query: 234 VFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
+F+ M K + TY ++ ++G+ + ++ ++M ++G + T ++++ G
Sbjct: 179 LFEEMLEKGCIPT-VFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGF 237
Query: 294 LARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
G + EA+++ E+ PD+ Y+ L++G+ + EA ++ REMI+ G P +
Sbjct: 238 CKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDI 297
Query: 350 HTYIMLLQGH 359
+Y +L+ G+
Sbjct: 298 VSYNILIDGY 307
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 135/310 (43%), Gaps = 26/310 (8%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
L PN YG+L++ C EA ++ M +G P++ +I + K
Sbjct: 44 LGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKV 103
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
DEA ++ M + + TY ++ +CK GK+ +A + M RG D + +
Sbjct: 104 DEAAELLNEM-IDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNV 162
Query: 289 IIYGLLARGRLREAYKVVEE-IEK---PDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+I G +G + EAY++ EE +EK P + Y+ L+ G R +F++M+++G
Sbjct: 163 LIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQG 222
Query: 345 CEPTMHTYIMLLQG-------------HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDA 391
C P + T+ LL G L R P +V+++T+ + G+ GK +A
Sbjct: 223 CVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTL-MRGMCSKGKPHEA 281
Query: 392 AKYVERVMNRGVEVPRFDYNKFLHYYSN----EEGVVMFEEVGKKLRE---VGLADLADI 444
+ + ++ GV YN + YS + + +F E+ K E + + D
Sbjct: 282 QRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDC 341
Query: 445 FQRYGKKMAT 454
R GK A
Sbjct: 342 LCRAGKVGAA 351
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 137/291 (47%), Gaps = 7/291 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
+ + +N ++D K ++ + +EM + + T+ L + E ++ + F
Sbjct: 156 DGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLF 215
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
M GC ++ N ++ C+ +VEA L L++ S P+ ++Y L++G C
Sbjct: 216 KDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSK 275
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G EA ++ M G P I + +I+ + K D A+K+F + ++ S
Sbjct: 276 GKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFS- 334
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y +ID +C+ GK+ A+ + ++M G D + ++ GL RL E+ ++ + +
Sbjct: 335 YSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMV 394
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
K P I Y+ L+ L + +R+ + ++F E+ +RG P + ++L+
Sbjct: 395 KFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILE 445
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 136/303 (44%), Gaps = 16/303 (5%)
Query: 66 AQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALMTLAEVREL 124
AQ C + N +++ ++ + + + +D E L EM N T+ L L ++ +L
Sbjct: 80 AQGC-SPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138
Query: 125 KKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWL 183
K+ V+ F M GC + N ++ ++ + EA L ++ E P Y L
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198
Query: 184 IKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM 243
+ G+ G+ ++ M +G P+I + +++ F K+ EA ++F MR
Sbjct: 199 LSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMR---- 254
Query: 244 DDLG----LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
LG + +Y ++ MC +GK +A +L EM + G+ D ++ + +I G G L
Sbjct: 255 -SLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGAL 313
Query: 300 REAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
A K+ EI K PD Y +I L R + A VF++MI G P I L
Sbjct: 314 DHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPL 373
Query: 356 LQG 358
+ G
Sbjct: 374 VIG 376
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 170/372 (45%), Gaps = 26/372 (6%)
Query: 65 KAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRE 123
+A+ C N T+N +VD +GK+ D L EM V D +T+ + TL +
Sbjct: 71 QAKGC-KPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGR 129
Query: 124 LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGW 182
L + F M + GC N ++ L + +A L+ ++ P+ + Y
Sbjct: 130 LSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSS 189
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
LI G G+ ++A K++ M G +P +++ K + D+A+++ M+ +R
Sbjct: 190 LITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMK-ER 248
Query: 243 MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
G+ TY +I K G + +AY +L+EM + G + D +T S +I GL+ +L EA
Sbjct: 249 GVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEA 308
Query: 303 YKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+V++++EK PD Y+ LI GL + +A ++F M +GC P + TY L+
Sbjct: 309 CQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITA 368
Query: 359 HLGKRGRK---------------GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
LGK R PD I V L KAG+ DA + + +G+
Sbjct: 369 -LGKAARVESACVLFEEMESVGIQPDLFTYCSIITV--LGKAGQVDDADRLFSEMRGKGL 425
Query: 404 EVPRFDYNKFLH 415
YN FL+
Sbjct: 426 SPDVITYNAFLN 437
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 136/279 (48%), Gaps = 7/279 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
+SITF ++D +GK+ +D E L EM R + T+ + +V +L + N
Sbjct: 218 DSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLL 277
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDV 190
M GC+ + + ++ L + + EA ++ K+ E P+ I Y LI G
Sbjct: 278 DEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKA 337
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G L +A ++++ M +G P + +I K + + A +F+ M + L T
Sbjct: 338 GLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQP-DLFT 396
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y +I + K G++ A + EM +G+ D +T ++ + L GR +EA K+ E+++
Sbjct: 397 YCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMK 456
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGC 345
+ PD++ Y L+ GL + + +A + +E+I++GC
Sbjct: 457 ESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGC 495
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 140/288 (48%), Gaps = 30/288 (10%)
Query: 147 NKVVKTLCQRKLVVEAKYLI--LKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
N ++ L + EA+ L LK ++W P+ ++Y LI G A ++ M
Sbjct: 13 NSLLNALAKAGQCEEAQLLFEELKAAKWT-PDVVSYSCLINSLGRAGKWEAALEVVAEMQ 71
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG----LSTYRIVIDWMCK 260
+G +P++ + +++ K + DEA+++ MR D G + TY +I + K
Sbjct: 72 AKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMR-----DNGCVPDVRTYNCLISTLGK 126
Query: 261 RGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISL 316
G++S+A+T+ EM +RG D T +S+IYGL GR ++A +++EE+E+ PD+
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMT 186
Query: 317 YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR----------- 365
Y LI GL + +A ++F+EM +RG +P T+ L+ LGK GR
Sbjct: 187 YSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDA-LGKAGRVDDALELLDEM 245
Query: 366 --KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
+G P V + G K G ++A ++ + G + Y+
Sbjct: 246 KERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYS 293
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 131/290 (45%), Gaps = 7/290 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRR-RLVNDKTFKIALMTLAEVRELKKMVNFFHI 133
+T++ ++ +GK ++ QEM RR R + TF + L + + +
Sbjct: 185 MTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDE 244
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGD 192
M + G + + N ++ + +VEA L+ ++ KP+ + Y LI G
Sbjct: 245 MKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQ 304
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
L EA ++ M EG P + +I K ++A ++F M+ K + + TY
Sbjct: 305 LDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNP-DVVTYS 363
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
+I + K ++ A + EEM GI+ D T SII L G++ +A ++ E+
Sbjct: 364 TLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGK 423
Query: 311 --KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
PD+ Y+ + L R R +EA ++F +M + G P + TY LL G
Sbjct: 424 GLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLG 473
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 128/294 (43%), Gaps = 13/294 (4%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
++IT+N +++ +GK+ ++ M + D T+ + L + ++ F
Sbjct: 323 DTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLF 382
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
M G + L ++ L + V +A L ++ + + P+ I Y +
Sbjct: 383 EEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRG 442
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM--RVKRMDDLGL 248
G EA KI+ M + G P + D ++ K + D+A + + + + D L
Sbjct: 443 GRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKF 502
Query: 249 S-TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
I+ W G + +A+ +L+ +G+ + +++I L GR+ EA+ +E
Sbjct: 503 DECLEILTSW----GNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLE 558
Query: 308 EIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
+++ KPDI Y LI L + + A ++ EM KRG + + +Y L++
Sbjct: 559 DLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVR 612
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 105/245 (42%), Gaps = 32/245 (13%)
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
TY +++ + K G+ +A + EE+ D ++ S +I L G+ A +VV E+
Sbjct: 11 TYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEM 70
Query: 310 E----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
+ KP++ Y+ L+ L + + EA ++ EM GC P + TY L+ LGK GR
Sbjct: 71 QAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLIS-TLGKAGR 129
Query: 366 -------------KG--PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY 410
+G PD I+ GL K G+S A + +E + G Y
Sbjct: 130 LSEAFTLFAEMRERGCVPDTFTYNSLIY--GLGKVGRSQKAMELLEEMERHGCPPDVMTY 187
Query: 411 NKFLHYYSNEEGVV----MFEEV---GKKLREVGLADLADIFQRYGK---KMATRERRRN 460
+ + + V +F+E+ G+K + L D + G+ + + +
Sbjct: 188 SSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKE 247
Query: 461 RAIEP 465
R ++P
Sbjct: 248 RGVKP 252
>gi|356495741|ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 91/404 (22%), Positives = 182/404 (45%), Gaps = 48/404 (11%)
Query: 5 PGHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQI---CNNFPLSWRPVYLFFQ 61
P + + +L +Y P L SL+ + L+ Q+ C N S +L+
Sbjct: 44 PDLVNEISRLLSDHRY-PHHDLELSLNPFSAQLSTNLVEQVLKRCKNLGFSAHRFFLW-- 100
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEM--GRRRLVNDKTFKIALMTLA 119
K+ P F H+ ++F+ +V+I+G + + W+ L EM +N + F + +
Sbjct: 101 --AKSIPGFQHSVMSFHILVEILGSCKQFAILWDFLTEMRESHHYEINSEIFWLIFRAYS 158
Query: 120 EVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIA 179
+ + F+ M++ G + ++ L+K++ LC+RK V +A+ L +
Sbjct: 159 QANLPDGAIRSFNRMDEFGVKPTIHDLDKLLFILCKRKHVKQAQQLFHQAKNRFSLTAKT 218
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
Y LI G+ ++GD +A ++ M ++G + + +++ K + DEA +F M
Sbjct: 219 YSILISGWGEIGDSEKACDLFQAMLEQGCPVDLLAYNNLLQALCKGGRVDEAKNIFHDML 278
Query: 240 VKRM-----------------DDL-----------------GLSTYRIVIDWMCKRGKIS 265
KR+ DD+ + TY +I +CK +
Sbjct: 279 SKRVEPDAFTYSIFIHSYCDADDVQSAFRVLDKMRRYNLLPNVFTYNCIIKQLCKNEHVE 338
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLI 321
+AY +L+EM RG++ D + ++I + A +++ +EK PD Y+ ++
Sbjct: 339 EAYQLLDEMISRGVKPDTWSYNAIQAYHCDHCEVNRALRLMFRMEKDICLPDRHTYNMVL 398
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
K L+R+ R + T+V+ M+ + P++ TY +++ G K+G+
Sbjct: 399 KLLIRIGRFDKVTEVWENMVDKKFYPSVSTYSVMIHGFCKKKGK 442
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 108/260 (41%), Gaps = 40/260 (15%)
Query: 190 VGDLIEASKIWNLMTD----EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD 245
+G + + +W+ +T+ +E + ++ + + + N D A++ F RMD+
Sbjct: 121 LGSCKQFAILWDFLTEMRESHHYEINSEIFWLIFRAYSQANLPDGAIRSFN-----RMDE 175
Query: 246 LGLSTYRIVID----WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG---- 297
G+ +D +CKR + QA + + R +L++ Y +L G
Sbjct: 176 FGVKPTIHDLDKLLFILCKRKHVKQAQQLFHQAKNR------FSLTAKTYSILISGWGEI 229
Query: 298 ----RLREAYKVVEEIEKP-DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
+ + ++ + E P D+ Y+ L++ L + R EA +F +M+ + EP TY
Sbjct: 230 GDSEKACDLFQAMLEQGCPVDLLAYNNLLQALCKGGRVDEAKNIFHDMLSKRVEPDAFTY 289
Query: 353 IMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMN 400
+ + + L K R P V + L K +A + ++ +++
Sbjct: 290 SIFIHSYCDADDVQSAFRVLDKMRRYNLLPNVFTYNCIIKQLCKNEHVEEAYQLLDEMIS 349
Query: 401 RGVEVPRFDYNKFLHYYSNE 420
RGV+ + YN Y+ +
Sbjct: 350 RGVKPDTWSYNAIQAYHCDH 369
>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 121/509 (23%), Positives = 207/509 (40%), Gaps = 84/509 (16%)
Query: 5 PGHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQ 64
P + R+C ++ ++ + S+L NF + + + N L+ FFQ+
Sbjct: 7 PLAISRICRLVLLRRCNAISKL-------NFVFSDDIVDAVLRNLRLNPTASLGFFQFVS 59
Query: 65 KAQPCFAHNSITFNRMVDIIGKSRNID--------------------LFWETLQEMGRRR 104
K Q F N ++ ++V I+ + R D + W+ L + R
Sbjct: 60 KQQN-FRPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWDELVGVYREF 118
Query: 105 LVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSL----EMLNKVVK--------- 151
+ F + L E K + F M CG SL +LN +VK
Sbjct: 119 AFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHY 178
Query: 152 ----------------------TLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYC 188
C+ V EA + K+ ++PN + Y LI GY
Sbjct: 179 VYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYV 238
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
+GD+ A + M+++G ++ +I+ + K K DEA KV + M+ +
Sbjct: 239 SLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDE 298
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
Y ++ID C+ GKI A +L+EM + G++ + +S+I G RG + EA V+
Sbjct: 299 RAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITR 358
Query: 309 IE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG------ 358
+ KPD Y+ L+ G R EA + +M++ G EPT+ TY LL+G
Sbjct: 359 MVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGA 418
Query: 359 --------HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY 410
HL + PD V + T+ + GL K A+ + ++ RG R +
Sbjct: 419 FDDALQIWHLMMKRGVAPDE-VGYSTL-LDGLFKMENFEGASTLWKDILARGFTKSRITF 476
Query: 411 NKFLHYYSNEEGVVMFEEVGKKLREVGLA 439
N + +V EE+ K++++G +
Sbjct: 477 NTMISGLCKMGKMVEAEEIFDKMKDLGCS 505
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 124/260 (47%), Gaps = 39/260 (15%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEA 196
G + +L + N ++ C+R + EA+ +I ++ +W +KP+ +Y L+ GYC G EA
Sbjct: 328 GLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEA 387
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM--RVKRMDDLGLS----- 249
+ + M EG EP++ + +++ ++ D+A++++ +M R D++G S
Sbjct: 388 FNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDG 447
Query: 250 ---------------------------TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEAD 282
T+ +I +CK GK+ +A + ++M G D
Sbjct: 448 LFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPD 507
Query: 283 NLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFR 338
+T ++I G + +A+KV +E+ P I +Y+ LI GL + RR E T +
Sbjct: 508 GITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLT 567
Query: 339 EMIKRGCEPTMHTYIMLLQG 358
EM RG P + TY L+ G
Sbjct: 568 EMGIRGLTPNIVTYGALIDG 587
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 144/329 (43%), Gaps = 41/329 (12%)
Query: 70 FAHNSITFNRMVDII---GKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKK 126
F + ITFN M+ + GK + ++ ++++G + T++ + + + +
Sbjct: 469 FTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSP--DGITYRTLIDGYCKASNVGQ 526
Query: 127 MVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIK 185
M S+EM N ++ L + + +VE L+ ++ + PN + YG LI
Sbjct: 527 AFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALID 586
Query: 186 GYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR------ 239
G+C G L +A + MT+ G +I + M+ +++ + DEA + Q M
Sbjct: 587 GWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFP 646
Query: 240 ---------------VKRMDDLGLS----------TYRIVIDWMCKRGKISQAYTMLEEM 274
K D L S Y I I +CK GK+ A +
Sbjct: 647 DHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSML 706
Query: 275 FKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRA 330
+G DN T ++I+G A G + EA+++ +E+ + P+I Y+ LI GL +
Sbjct: 707 SLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENV 766
Query: 331 REATQVFREMIKRGCEPTMHTYIMLLQGH 359
A ++F ++ ++G P + TY L+ G+
Sbjct: 767 DRAQRLFHKLHQKGLFPNVVTYNTLIDGY 795
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 127/278 (45%), Gaps = 32/278 (11%)
Query: 146 LNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
N ++ LC+ +VEA+ + K+ + P+ I Y LI GYC ++ +A K+ M
Sbjct: 476 FNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAME 535
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
E PSI++ + +I FK + E + M ++ + + TY +ID CK G +
Sbjct: 536 REPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTP-NIVTYGALIDGWCKEGML 594
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA----YKVVEEIEKPDISLYHGL 320
+A++ EM + G+ A+ + S+++ GL GR+ EA K+V+ PD +
Sbjct: 595 DKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPD---HECF 651
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVG 380
+K +R A Q + + C+ T+++ P+ +V I +
Sbjct: 652 LKSDIRY----AAIQKIADSLDESCK----TFLL-------------PNNIVY--NIAIA 688
Query: 381 GLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYS 418
GL K GK DA ++ + +G F Y +H YS
Sbjct: 689 GLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYS 726
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 74/144 (51%), Gaps = 1/144 (0%)
Query: 172 WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEA 231
++ PN I Y I G C G + +A + +++++ +GF P +I + DEA
Sbjct: 675 FLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEA 734
Query: 232 MKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
++ M ++R + TY +I+ +CK + +A + ++ ++G+ + +T +++I
Sbjct: 735 FRLRDEM-LRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLID 793
Query: 292 GLLARGRLREAYKVVEEIEKPDIS 315
G G + A+K+ +++ + IS
Sbjct: 794 GYCKIGNMDAAFKLKDKMIEEGIS 817
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N ++ LC+ + V A+ L KL + + PN + Y LI GYC +G++ A K+ + M +
Sbjct: 754 NALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIE 813
Query: 206 EGFEPSI 212
EG PSI
Sbjct: 814 EGISPSI 820
>gi|356557306|ref|XP_003546958.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 654
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 168/366 (45%), Gaps = 20/366 (5%)
Query: 56 VYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRR--RLVNDKTFKI 113
Y F+ + K Q + + M+ ++ + R W ++EM + L+ + F I
Sbjct: 139 AYRFYSWASK-QSGHRLDHDAYKAMIKVLSRMRQFGAVWALIEEMRQENPHLITPQVFVI 197
Query: 114 ALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWI 173
+ A R + K V M GCE + ++ LC+ V EA L +
Sbjct: 198 LMRRFASARMVHKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRYRW 257
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
KP+ + L+ G+C G L+EA + M D G EP I V + ++ + + K +A
Sbjct: 258 KPSVKHFTSLLYGWCKEGKLMEAKHVLVQMKDMGIEPDIVVYNNLLGGYAQAGKMGDAYD 317
Query: 234 VFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
+ + MR KR + ++Y ++I +CK ++ +A + EM G +AD +T S++I G
Sbjct: 318 LLKEMRRKRCEP-NATSYTVLIQSLCKHERLEEATRLFVEMQTNGCQADVVTYSTLISGF 376
Query: 294 LARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
G+++ Y++++E+ + P+ +Y ++ + E ++ EM K GC P +
Sbjct: 377 CKWGKIKRGYELLDEMIQQGHFPNQVIYQHIMLAHEKKEELEECKELVNEMQKIGCAPDL 436
Query: 350 HTY--IMLLQGHLG--KRG--------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVER 397
Y ++ L LG K G G P ++ I + G ++ G ++A +Y +
Sbjct: 437 SIYNTVIRLACKLGEVKEGIQLWNEMESSGLSPGMDTFVIMINGFLEQGCLVEACEYFKE 496
Query: 398 VMNRGV 403
++ RG+
Sbjct: 497 MVGRGL 502
>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
Length = 734
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 160/327 (48%), Gaps = 20/327 (6%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
N ++ + + L R + V M G + +++ LC V +A L+
Sbjct: 114 NAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELM 173
Query: 167 LKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI 225
++ E I+PN + Y L++GYC G + K++ M+++G EP + + +I++ K+
Sbjct: 174 GEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKV 233
Query: 226 NKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
K +A V MM V+R + + TY ++I+ MCK G + +A +L++M ++G+ D +T
Sbjct: 234 GKAKKAHGVMDMM-VRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVT 292
Query: 286 LSSIIYGLLARGRLREAYKVVEE------IEKPDISLYHGLIKGLLRLRRAREATQVFRE 339
+++I GL + EA ++EE I KP++ ++ +I+GL + R R+A QV
Sbjct: 293 YNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAM 352
Query: 340 MIKRGCEPTMHTYIMLLQG----HLGKRGRKGPDPLVNFD--------TIFVGGLVKAGK 387
M + GC + TY +L+ G H ++ + D + + +I + G K +
Sbjct: 353 MEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQ 412
Query: 388 SLDAAKYVERVMNRGVEVPRFDYNKFL 414
A + + +RG+E F Y L
Sbjct: 413 VDRAEDLLSTMRDRGIEPELFHYIPLL 439
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 128/284 (45%), Gaps = 16/284 (5%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV---NDKTFKIALMTLAEVRELKKM 127
A + +T+N ++ + +D L+EM R + + N TF + L ++ +++
Sbjct: 287 APDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQA 346
Query: 128 VNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKG 186
+M + GC +L N ++ L + V +A L+ +++ ++P+ Y LIKG
Sbjct: 347 FQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKG 406
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD- 245
+C + + A + + M D G EP + ++ + + A +F MD+
Sbjct: 407 FCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFN-----EMDNN 461
Query: 246 --LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
L + Y +I CK G + A +L+ + G+ D +T S +I G + A
Sbjct: 462 FPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAAN 521
Query: 304 KVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
V++++ PD++++ LI+G + ++ REMI +
Sbjct: 522 GVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITK 565
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 113/258 (43%), Gaps = 8/258 (3%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N +T+N ++ + + + E + EM L D T+ I + ++ ++ + +
Sbjct: 361 NLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLL 420
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVG 191
M D G E L ++ +C++ ++ A+ L ++ + +AY +I G C G
Sbjct: 421 STMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAG 480
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLST 250
DL A ++ + DEG P +I F K + A V QM + D ++
Sbjct: 481 DLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPD--VAV 538
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA----RGRLREAYKVV 306
+ +I +G+I++ ++ EM + I D+ +S++ L+A + L+
Sbjct: 539 FDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVASNEGKALLQSLPDFS 598
Query: 307 EEIEKPDISLYHGLIKGL 324
EI K +I+ L+K L
Sbjct: 599 AEISKGNINSPQELMKVL 616
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 21/210 (10%)
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMF---KRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
+Y V+ +C+RG +A +L M + ++ + ++ L A +A ++
Sbjct: 79 SYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLL 138
Query: 307 EEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
+ + D+ Y LI+GL +A ++ EM + G EP + Y LLQG+ K
Sbjct: 139 RSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYC-K 197
Query: 363 RGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFD 409
GR KG +P V T + L K GK+ A ++ ++ RG+E
Sbjct: 198 SGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVT 257
Query: 410 YNKFLHYYSNEEGVVMFEEVGKKLREVGLA 439
YN ++ E V V KK+ E G+A
Sbjct: 258 YNVLINCMCKEGSVKEAIGVLKKMSEKGVA 287
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 158/310 (50%), Gaps = 14/310 (4%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMT 117
FFQ+ +Q + H ++++N +++++ KS D + T +M V N T+ L +
Sbjct: 3 FFQWA-GSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRS 61
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWI---- 173
L + + ++ + F M GC ++ + ++ LC+ + V EA L L+E I
Sbjct: 62 LCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAEL---LNEMIDGGH 118
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
+PN + YG L+ G C +G L EA +++ M G P V + +I+ F K EA +
Sbjct: 119 QPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYR 178
Query: 234 VFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
+F+ M K + TY ++ ++G+ + ++ ++M ++G + T ++++ G
Sbjct: 179 LFEEMLEKGCIPT-VFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGF 237
Query: 294 LARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
G + EA+++ E+ PD+ Y+ LI+G+ + EA ++ REMI+ G P +
Sbjct: 238 CKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDI 297
Query: 350 HTYIMLLQGH 359
+Y +L+ G+
Sbjct: 298 VSYNILIDGY 307
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 136/310 (43%), Gaps = 26/310 (8%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
L+ PN YG+L++ C EA ++ M +G P++ +I + K
Sbjct: 44 LAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKV 103
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
DEA ++ M + + TY ++ +CK GK+ +A + M RG D + +
Sbjct: 104 DEAAELLNEM-IDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNV 162
Query: 289 IIYGLLARGRLREAYKVVEE-IEK---PDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+I G +G + EAY++ EE +EK P + Y+ L+ G R +F++M+++G
Sbjct: 163 LIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQG 222
Query: 345 CEPTMHTYIMLLQG-------------HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDA 391
C P + T+ LL G L R P +V+++T+ + G+ GK +A
Sbjct: 223 CVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTL-IRGMCSKGKPHEA 281
Query: 392 AKYVERVMNRGVEVPRFDYNKFLHYYSN----EEGVVMFEEVGKKLRE---VGLADLADI 444
+ + ++ GV YN + YS + + +F E+ K E + + D
Sbjct: 282 QRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDC 341
Query: 445 FQRYGKKMAT 454
R GK A
Sbjct: 342 LCRAGKVGAA 351
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 137/291 (47%), Gaps = 7/291 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
+ + +N ++D K ++ + +EM + + T+ L + E ++ + F
Sbjct: 156 DGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLF 215
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
M GC ++ N ++ C+ +VEA L L++ S P+ ++Y LI+G C
Sbjct: 216 KDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSK 275
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G EA ++ M G P I + +I+ + K D A+K+F + ++ S
Sbjct: 276 GKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFS- 334
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y +ID +C+ GK+ A+ + ++M G D + ++ GL RL E+ ++ + +
Sbjct: 335 YSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMV 394
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
K P I Y+ L+ L + +R+ + ++F E+ +RG P + ++L+
Sbjct: 395 KFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILE 445
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 136/303 (44%), Gaps = 16/303 (5%)
Query: 66 AQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALMTLAEVREL 124
AQ C + N +++ ++ + + + +D E L EM N T+ L L ++ +L
Sbjct: 80 AQGC-SPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138
Query: 125 KKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWL 183
K+ V+ F M GC + N ++ ++ + EA L ++ E P Y L
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198
Query: 184 IKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM 243
+ G+ G+ ++ M +G P+I + +++ F K+ EA ++F MR
Sbjct: 199 LSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMR---- 254
Query: 244 DDLG----LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
LG + +Y +I MC +GK +A +L EM + G+ D ++ + +I G G L
Sbjct: 255 -SLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGAL 313
Query: 300 REAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
A K+ EI K PD Y +I L R + A VF++MI G P I L
Sbjct: 314 DHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPL 373
Query: 356 LQG 358
+ G
Sbjct: 374 VIG 376
>gi|224111364|ref|XP_002315827.1| predicted protein [Populus trichocarpa]
gi|222864867|gb|EEF01998.1| predicted protein [Populus trichocarpa]
Length = 472
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/462 (22%), Positives = 198/462 (42%), Gaps = 29/462 (6%)
Query: 23 ESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVD 82
+ L +L LT + L + + + FF + Q ++H +N M+D
Sbjct: 13 DHNLEKTLDQLGLELTTDLVLNVLGRLHFEEKTSFRFFMWAGH-QKNYSHEPCAYNEMID 71
Query: 83 IIG----KSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRE--LKKMVNFFHIMN- 135
I+ K+R + + L M +R N ++ L L E L ++ F
Sbjct: 72 ILTSTKYKARQFRIVCDMLDYM-KRNNKNVVPVEVLLTILRNYTEKYLTRVQKFAKKKRI 130
Query: 136 DCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIE 195
+ + N ++ LC+ L +A+ L ++ +KP+ Y + G+C V +
Sbjct: 131 RVKTQPEINAFNLLLDALCKCCLAEDAEGLFKRVKNKVKPDANTYNVMFFGWCRVRNPTR 190
Query: 196 ASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK--RMDDLGLSTYRI 253
K+ M G P I+ F + +EA ++F+ MR K M TY I
Sbjct: 191 GMKVLEEMIQLGHTPDSFTYITAIDAFCRAGMVNEAAELFEFMRTKGSTMSSPTAKTYAI 250
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK-- 311
+I + + ++ + + +LE+M G D T +I G+ + G++ EAY+ ++E+
Sbjct: 251 MIGALVRNNRMDECFKLLEDMINSGCLPDVSTFKELIEGMCSAGKIDEAYRFLQEMGNKG 310
Query: 312 --PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG--HLG------ 361
PDI Y+ +K L + + EA +++ MI+ GC P++ T+ ML+ +G
Sbjct: 311 YPPDIVTYNCFLKVLCENKNSEEALRLYERMIEAGCFPSVQTHNMLISMFFEMGDPDGAF 370
Query: 362 ----KRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
+ ++G V+ + + GL K DA +E ++N+G+++P ++ FL
Sbjct: 371 ETWYEMDKRGCAQDVDTYIVMIDGLFGCNKVEDACFLIEDIVNKGMKLPYQKFDSFLMQL 430
Query: 418 SNEEGVVMFEEVGKKLREVGLADLAD--IFQRYGKKMATRER 457
S + + + +R +A + + K M+ R R
Sbjct: 431 SVIGNIRAIHRLSEHMRTFHNPSMARRYVLNQKRKSMSVRGR 472
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 169/364 (46%), Gaps = 24/364 (6%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRR--LVNDKTFKIALMTLAEVRELKKMVNF 130
++++ N +V K ++ +QEM + + TF + L + +K +
Sbjct: 258 SNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEI 317
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCD 189
+M G + + N V+ LC+ V EA + L ++ PN + Y LI C
Sbjct: 318 MDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCK 377
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
+ EA+++ ++T +G P + + +I+ AM++F+ MR K +
Sbjct: 378 ENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEF- 436
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
TY ++ID +C +GK+ +A ML++M G +T +++I G + REA ++ +E+
Sbjct: 437 TYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEM 496
Query: 310 EKPDIS----LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG- 364
E +S Y+ LI GL + RR +A Q+ +MI G +P +TY LL H + G
Sbjct: 497 EVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLT-HFCRGGD 555
Query: 365 ------------RKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
G +P +V + T+ + GL KAG+ A+K + + +G+ + YN
Sbjct: 556 IKKAADIVQAMTSNGCEPDIVTYGTL-ISGLCKAGRVEVASKLLRSIQMKGINLTPHAYN 614
Query: 412 KFLH 415
+
Sbjct: 615 PVIQ 618
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 167/362 (46%), Gaps = 22/362 (6%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHIM 134
TFN ++ + ++ + L++M LV D KTF + E +L + M
Sbjct: 191 TFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQM 250
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS--EWIKPNEIAYGWLIKGYCDVGD 192
+ GC +S +N +V C+ V +A I ++S + P++ + L+ G C G
Sbjct: 251 VEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGH 310
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ A +I ++M EG++P + + +I K+ + EA++V M + R TY
Sbjct: 311 VKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM-ITRDCSPNTVTYN 369
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
+I +CK ++ +A + + +GI D T +S+I GL R A ++ EE+
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK 429
Query: 311 --KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGP 368
+PD Y+ LI L + EA + ++M GC ++ TY L+ G +
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREA 489
Query: 369 DPL-------------VNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
+ + V ++T+ + GL K+ + DAA+ +++++ G + ++ YN L
Sbjct: 490 EEIFDEMEVHGVSRNSVTYNTL-IDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLT 548
Query: 416 YY 417
++
Sbjct: 549 HF 550
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 156/353 (44%), Gaps = 22/353 (6%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHIM 134
T+N ++ + K + E L +M R N T+ + TL + ++++ ++
Sbjct: 332 TYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVL 391
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDL 193
G + N +++ LC + A L ++ S+ +P+E Y LI C G L
Sbjct: 392 TSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL 451
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
EA + M G S+ + +I+ F K NK EA ++F M V + + TY
Sbjct: 452 DEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSV-TYNT 510
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE--- 310
+ID +CK ++ A ++++M G + D T +S++ G +++A +V+ +
Sbjct: 511 LIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNG 570
Query: 311 -KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR------ 363
+PDI Y LI GL + R A+++ R + +G T H Y ++QG KR
Sbjct: 571 CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAI 630
Query: 364 --------GRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRF 408
+ P V++ +F G G +A ++ ++ +G VP F
Sbjct: 631 NLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGF-VPEF 682
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 148/344 (43%), Gaps = 57/344 (16%)
Query: 126 KMVNFFHI-MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWL 183
K+V H M+ G + + N ++K LC+ + A ++ + + + P+E + +
Sbjct: 171 KLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTV 230
Query: 184 IKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM 243
++GY + GDL A +I M + G S V+ ++ F K + ++A+ Q M +
Sbjct: 231 MQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDG 290
Query: 244 DDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
T+ +++ +CK G + A +++ M + G + D T +S+I GL G ++EA
Sbjct: 291 FFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAV 350
Query: 304 KV----------------------------VEEIEK-----------PDISLYHGLIKGL 324
+V VEE + PD+ ++ LI+GL
Sbjct: 351 EVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 410
Query: 325 LRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR--------------KGPDP 370
R R A ++F EM +GCEP TY ML+ L +G+
Sbjct: 411 CLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDS-LCSKGKLDEALNMLKQMELSGCARS 469
Query: 371 LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
++ ++T+ + G KA K+ +A + + + GV YN +
Sbjct: 470 VITYNTL-IDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLI 512
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 112/267 (41%), Gaps = 38/267 (14%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVN 129
+ NS+T+N ++D + KSR ++ + + +M DK T+ L ++KK +
Sbjct: 502 SRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAAD 561
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCD 189
M GCE P+ + YG LI G C
Sbjct: 562 IVQAMTSNGCE----------------------------------PDIVTYGTLISGLCK 587
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
G + ASK+ + +G + + +I+ F+ K EA+ +F+ M +
Sbjct: 588 AGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAV 647
Query: 250 TYRIVIDWMCK-RGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
+YRIV +C G I +A L E+ ++G + +L + GLL K+V
Sbjct: 648 SYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNM 707
Query: 309 I-EKPDISLYH-GLIKGLLRLRRAREA 333
+ +K S ++KGLL++R+ ++A
Sbjct: 708 VMQKARFSEEEVSMVKGLLKIRKFQDA 734
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 123/280 (43%), Gaps = 31/280 (11%)
Query: 183 LIKGYCDVGDLIEASKIWNLMTDE-GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK 241
LI+ Y E + + M DE G +P ++M+ D ++K+ ++ K
Sbjct: 124 LIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLV----DGNSLKLVEISHAK 179
Query: 242 RMDDLGL----STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
M G+ ST+ ++I +C+ ++ A MLE+M G+ D T ++++ G + G
Sbjct: 180 -MSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEG 238
Query: 298 RLREAYKVVEEIEK-----PDISLYHGLIKGLLRLRRAREATQVFREMIKR-GCEPTMHT 351
L A ++ E++ + ++S+ + ++ G + R +A +EM + G P +T
Sbjct: 239 DLDGALRIREQMVEFGCSWSNVSV-NVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYT 297
Query: 352 YIMLLQGHLGKRG-------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERV 398
+ L+ G L K G ++G DP V + GL K G+ +A + ++++
Sbjct: 298 FNTLVNG-LCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM 356
Query: 399 MNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
+ R YN + E V E+ + L G+
Sbjct: 357 ITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGI 396
>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 721
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 133/268 (49%), Gaps = 7/268 (2%)
Query: 97 LQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQ 155
+EMG + L N T+ I + + E+ + F M E+++ N ++ C+
Sbjct: 215 FKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCK 274
Query: 156 RKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDV 214
AKY ++ + + P + Y LI GYC+ G+ +A K++N MT +G P+
Sbjct: 275 LGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYT 334
Query: 215 VDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEM 274
+I + N EA+++F M+ +++ + TY ++I+ C+ G IS+A+ +L+EM
Sbjct: 335 FTAIISGLCRANMMAEAIRLFGEMKERKIMPSEV-TYNVMIEGHCRSGNISEAFHLLDEM 393
Query: 275 FKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISL----YHGLIKGLLRLRRA 330
+G D T +I GL + GR+ EA + V+++ K L Y L+ G + R
Sbjct: 394 VGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRF 453
Query: 331 REATQVFREMIKRGCEPTMHTYIMLLQG 358
++A R M++RG + Y +L+ G
Sbjct: 454 KDAVSACRVMVERGVAMDLVCYAILIDG 481
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 114/259 (44%), Gaps = 26/259 (10%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
+S ++P+ Y +++ C++ D +A ++ + M + SI V + +I K +
Sbjct: 123 VSANVQPDIYIYSAVVRSLCELKDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRI 182
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
EA+++ + K ++ ++ Y GK ++A + +EM ++G+ A+++T S
Sbjct: 183 WEALEIKNCLMQKGLEANVVTYY----------GKFNEAELLFKEMGEKGLCANHITYSI 232
Query: 289 IIYGLLARGRLREAYKVVEEIEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRG 344
+I RG + A ++++ K I Y+ LI G +L A A F EMI +G
Sbjct: 233 LIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKG 292
Query: 345 CEPTMHTYIMLLQGHL------------GKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAA 392
PT+ TY L+ G+ + KG P T + GL +A +A
Sbjct: 293 LTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAI 352
Query: 393 KYVERVMNRGVEVPRFDYN 411
+ + R + YN
Sbjct: 353 RLFGEMKERKIMPSEVTYN 371
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 113/244 (46%), Gaps = 10/244 (4%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVN 129
A + + + ++D + + + L+EM L D ++ ++ LK+
Sbjct: 469 AMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFG 528
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYC 188
+ IM D GC ++ ++ LC+ L+ +A+ L + L + PN I YG +
Sbjct: 529 LWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLT 588
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
G++ +A ++ + M +GF + + +I F ++ K +EA K+ M D+ L
Sbjct: 589 RGGNMEKAVQLHHAML-KGFLATTVSYNILIRGFCRLGKIEEATKLLHGM----TDNDIL 643
Query: 249 S---TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
TY +I CKR + +A + M +G++ D L S +++G G L +A+++
Sbjct: 644 PDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFEL 703
Query: 306 VEEI 309
+E+
Sbjct: 704 RDEM 707
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 87/209 (41%), Gaps = 37/209 (17%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
++P+ + Y +I + G+L EA +W++M DEG P++ +I K D+A
Sbjct: 503 LRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAE 562
Query: 233 --------------------------------KVFQMMRVKRMDDLGLS-TYRIVIDWMC 259
K Q+ L + +Y I+I C
Sbjct: 563 LLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLKGFLATTVSYNILIRGFC 622
Query: 260 KRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV----VEEIEKPDIS 315
+ GKI +A +L M I D +T S+IIY R L+EA K+ +++ KPD
Sbjct: 623 RLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTL 682
Query: 316 LYHGLIKGLLRLRRAREATQVFREMIKRG 344
Y L+ G +A ++ EMI+RG
Sbjct: 683 AYSFLVHGCCIAGELEKAFELRDEMIRRG 711
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 121/297 (40%), Gaps = 22/297 (7%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND----KTFKIALMTLAEVRELKKMV 128
+ +T+N M++ +S NI + L EM + V D + L ++ V E K+ V
Sbjct: 366 SEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFV 425
Query: 129 NFFH-----IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGW 182
+ H + N C YS +V C+ +A + E + + + Y
Sbjct: 426 DDLHKDHHKLNNMC---YS-----ALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAI 477
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
LI G D + M + G P + MI+ K EA ++ +M V
Sbjct: 478 LIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIM-VDE 536
Query: 243 MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
+ TY +I+ +CK G + +A + +E + +++T + L G + +A
Sbjct: 537 GCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKA 596
Query: 303 YKVVEEIEKPDISL---YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
++ + K ++ Y+ LI+G RL + EAT++ M P TY ++
Sbjct: 597 VQLHHAMLKGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTII 653
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 61/136 (44%), Gaps = 1/136 (0%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
N IT+ +D + + N++ + M + L ++ I + + ++++ H
Sbjct: 576 NHITYGCFLDHLTRGGNMEKAVQLHHAMLKGFLATTVSYNILIRGFCRLGKIEEATKLLH 635
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDVG 191
M D + ++ C+R + EA K L + +KP+ +AY +L+ G C G
Sbjct: 636 GMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAG 695
Query: 192 DLIEASKIWNLMTDEG 207
+L +A ++ + M G
Sbjct: 696 ELEKAFELRDEMIRRG 711
>gi|255579531|ref|XP_002530608.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529856|gb|EEF31788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 596
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 154/347 (44%), Gaps = 43/347 (12%)
Query: 57 YLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRR--LVNDKTFKIA 114
Y FF + K QP + H+ + MV I K R W L+EM + L+ + F +
Sbjct: 124 YRFFVWASK-QPGYRHSYENYKAMVKIFSKMRQFGAVWALLEEMRKDNSVLITSELFIVL 182
Query: 115 LMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIK 174
+ A R ++K + M GCE + ++ LC+ V +A L +
Sbjct: 183 IRRFASARLVEKAIEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKQAASLFEDMRVRFS 242
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+ + L+ G+C G LIEA + M + GFEP I V + ++ + K +A +
Sbjct: 243 PSLRHFTSLLYGWCREGKLIEAKHVLVQMREAGFEPDIVVFNNLLSAYSMAGKMTDAFDL 302
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
+ M V++ + ++Y I+I C + K+ +A + EM + G EAD +T +++I G
Sbjct: 303 LKEM-VRKGCEPNANSYTIMIQAFCSQEKMDEAMRVFVEMERTGCEADVVTYTALISGFC 361
Query: 295 ARGRLREAYKVVEEIEK---------------------------------------PDIS 315
G++ Y++++ +++ PD+S
Sbjct: 362 KWGKINRGYQILDAMKQKGHMPNQLTYLRILLAHEKKEELEECLELIESMRMVGCVPDLS 421
Query: 316 LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
+Y+ +I+ +L ++ Q++ EM P + T+++++ G LG+
Sbjct: 422 IYNVVIRLACKLGEVKQGVQIWNEMEASDFSPELDTFVIMIHGFLGQ 468
>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
Length = 624
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 160/327 (48%), Gaps = 20/327 (6%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
N ++ + + L R + V M G + +++ LC V +A L+
Sbjct: 114 NAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELM 173
Query: 167 LKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI 225
++ E I+PN + Y L++GYC G + K++ M+++G EP + + +I++ K+
Sbjct: 174 GEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKV 233
Query: 226 NKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
K +A V MM V+R + + TY ++I+ MCK G + +A +L++M ++G+ D +T
Sbjct: 234 GKAKKAHGVMDMM-VRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVT 292
Query: 286 LSSIIYGLLARGRLREAYKVVEE------IEKPDISLYHGLIKGLLRLRRAREATQVFRE 339
+++I GL + EA ++EE I KP++ ++ +I+GL + R R+A QV
Sbjct: 293 YNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAM 352
Query: 340 MIKRGCEPTMHTYIMLLQG----HLGKRGRKGPDPLVNFD--------TIFVGGLVKAGK 387
M + GC + TY +L+ G H ++ + D + + +I + G K +
Sbjct: 353 MEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQ 412
Query: 388 SLDAAKYVERVMNRGVEVPRFDYNKFL 414
A + + +RG+E F Y L
Sbjct: 413 VDRAEDLLSTMRDRGIEPELFHYIPLL 439
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 128/285 (44%), Gaps = 16/285 (5%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV---NDKTFKIALMTLAEVRELKK 126
A + +T+N ++ + +D L+EM R + + N TF + L ++ +++
Sbjct: 286 VAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQ 345
Query: 127 MVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIK 185
+M + GC +L N ++ L + V +A L+ +++ ++P+ Y LIK
Sbjct: 346 AFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIK 405
Query: 186 GYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD 245
G+C + + A + + M D G EP + ++ + + A +F MD+
Sbjct: 406 GFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFN-----EMDN 460
Query: 246 ---LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
L + Y +I CK G + A +L+ + G+ D +T S +I G + A
Sbjct: 461 NFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAA 520
Query: 303 YKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
V++++ PD++++ LI+G + ++ REMI +
Sbjct: 521 NGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITK 565
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 113/258 (43%), Gaps = 8/258 (3%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N +T+N ++ + + + E + EM L D T+ I + ++ ++ + +
Sbjct: 361 NLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLL 420
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVG 191
M D G E L ++ +C++ ++ A+ L ++ + +AY +I G C G
Sbjct: 421 STMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAG 480
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLST 250
DL A ++ + DEG P +I F K + A V QM + D ++
Sbjct: 481 DLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPD--VAV 538
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA----RGRLREAYKVV 306
+ +I +G+I++ ++ EM + I D+ +S++ L+A + L+
Sbjct: 539 FDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVASNEGKALLQSLPDFS 598
Query: 307 EEIEKPDISLYHGLIKGL 324
EI K +I+ L+K L
Sbjct: 599 AEISKGNINSPQELMKVL 616
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 21/210 (10%)
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMF---KRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
+Y V+ +C+RG +A +L M + ++ + ++ L A +A ++
Sbjct: 79 SYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLL 138
Query: 307 EEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
+ + D+ Y LI+GL +A ++ EM + G EP + Y LLQG+ K
Sbjct: 139 RSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYC-K 197
Query: 363 RGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFD 409
GR KG +P V T + L K GK+ A ++ ++ RG+E
Sbjct: 198 SGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVT 257
Query: 410 YNKFLHYYSNEEGVVMFEEVGKKLREVGLA 439
YN ++ E V V KK+ E G+A
Sbjct: 258 YNVLINCMCKEGSVKEAIGVLKKMSEKGVA 287
>gi|356544698|ref|XP_003540784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 495
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 171/378 (45%), Gaps = 22/378 (5%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMT 117
FF++ + P + H+ +F+ VDI + R+ + W + M RL + KT I
Sbjct: 89 FFKHLDRHHPSYTHSPSSFDHAVDIAARMRDFNSAWALVGRMRSLRLGPSPKTLAILAER 148
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNE 177
A + + V F M + G L N ++ LC+ K V A L+ L+ +P+
Sbjct: 149 YASNGKPHRAVRTFLSMAEHGIRQDLHSFNTLLDILCKSKRVETAHSLLKTLTSRFRPDT 208
Query: 178 IAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQM 237
+ Y L GYC + A ++ M G EP++ + M++ +F+ N+ EA + +
Sbjct: 209 VTYNILANGYCLIKRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLE 268
Query: 238 MRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
M+ KR ++ + TY VI G + +A + EM K G+ + T +++I L +
Sbjct: 269 MK-KRKCEIDVVTYTTVIHGFGVAGDVKKAKRVFHEMVKEGVVPNVATYNALIQVLCKKD 327
Query: 298 RLREAYKVVEEIEK-----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
+ A V EE+ + P++ Y+ +I+GL + A M + G + TY
Sbjct: 328 SVENAVVVFEEMAREGVCVPNVVTYNVVIRGLCHVGDMERALGFMERMGEHGLRACVQTY 387
Query: 353 IMLLQ-----GHLGKR----GRKGPDP-LVNFDT--IFVGGLVKAGKSLD---AAKYVER 397
++++ G + K G+ G L N DT + + + KS D A K +
Sbjct: 388 NVVIRYFCDAGEVEKALEVFGKMGDGSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLMD 447
Query: 398 VMNRGVEVPRFDYNKFLH 415
+++RG +F +N+ L+
Sbjct: 448 MVDRGFLPRKFTFNRVLN 465
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 73/171 (42%), Gaps = 6/171 (3%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV--NDKTFKIALMTLAEVRELKKMVNF 130
N T+N ++ ++ K +++ +EM R + N T+ + + L V ++++ + F
Sbjct: 312 NVATYNALIQVLCKKDSVENAVVVFEEMAREGVCVPNVVTYNVVIRGLCHVGDMERALGF 371
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYC- 188
M + G ++ N V++ C V +A + K+ + PN Y LI
Sbjct: 372 MERMGEHGLRACVQTYNVVIRYFCDAGEVEKALEVFGKMGDGSCLPNLDTYNVLISAMFV 431
Query: 189 --DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQM 237
DL+ A K+ M D GF P ++++ D A ++ +M
Sbjct: 432 RKKSEDLVVAGKLLMDMVDRGFLPRKFTFNRVLNGLVITGNQDFAKEILRM 482
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/416 (23%), Positives = 184/416 (44%), Gaps = 59/416 (14%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRR-RLVNDKTFKIALMTLAEVRELKKMVNFFHIM 134
TFN +++ + I E EM RR N ++ + L + V+ F M
Sbjct: 160 TFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKM 219
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDVGDL 193
GC+ + N ++ +LC+ +LV +A ++L L I PN Y ++ G+C +G L
Sbjct: 220 EQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQL 279
Query: 194 IEASK-----------------------------------IWNLMTDEGFEPSIDVVDKM 218
EA++ ++ MT++G EP+I + +
Sbjct: 280 NEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNAL 339
Query: 219 IETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRG 278
++ + +EA KVF++M +++ G+ +Y I+I+ CK ++ +A ++L EM+ +
Sbjct: 340 MDGYCLQRLMNEAKKVFEIM-IRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKA 398
Query: 279 IEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREAT 334
+ D +T S+++ GL GR +EA + +E+ P++ Y L+ G + EA
Sbjct: 399 LNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEAL 458
Query: 335 QVFREMIKRGCEPTMHTYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGL 382
++ + M ++ EP + + +L++G K G P + T+ + GL
Sbjct: 459 KLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGL 518
Query: 383 VKAGKSLDAAKYVERVMNRGVEVPRFDYN----KFLHYYSNEEGVVMFEE-VGKKL 433
+K G S +A ++ + G YN FL + + + +E VGK+
Sbjct: 519 LKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRF 574
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 166/371 (44%), Gaps = 37/371 (9%)
Query: 49 FPLSWRPVYLFFQYTQ-KAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVN 107
FP S +LFF + C S+ N + S NI + + L R +N
Sbjct: 29 FPSS----FLFFNHHHISTSACTRKPSLPQNNGGFVSNNSTNISI-DDALASFYRMVRMN 83
Query: 108 DKT----FKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAK 163
+ F L + A+ ++ +V+ + M+ G +++ LN ++ LC+ V A
Sbjct: 84 PRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAV 143
Query: 164 YLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETF 222
++ K+ + I P + LI G C+ G + EA +++N M G EP++ + +I
Sbjct: 144 SILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGL 203
Query: 223 FKINKDDEAMKVFQMMRVKRMDDLG----LSTYRIVIDWMCKRGKISQAYTMLEEMFKRG 278
K A+ VF K+M+ G + TY +ID +CK ++ A L EM RG
Sbjct: 204 CKTGNTSMAVDVF-----KKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRG 258
Query: 279 IEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREAT 334
I + T + +++G G+L EA ++ +E+ PD L+ GL + EA
Sbjct: 259 IPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEAR 318
Query: 335 QVFREMIKRGCEPTMHTYIMLLQGHLGKRG------------RKGPDPLVNFDTIFVGGL 382
VF M ++G EP + TY L+ G+ +R R+G P V+ I + G
Sbjct: 319 LVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGF 378
Query: 383 VKAGKSLDAAK 393
K+ + +D AK
Sbjct: 379 CKS-RRMDEAK 388
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 140/292 (47%), Gaps = 11/292 (3%)
Query: 73 NSITFNRMVDIIGKSRNID---LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
+++T +VD + K + L +ET+ E G N T+ + R + +
Sbjct: 297 DTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEP--NISTYNALMDGYCLQRLMNEAKK 354
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYC 188
F IM GC + N ++ C+ + + EAK L+ ++ + + P+ + Y L++G C
Sbjct: 355 VFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLC 414
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
G EA I+ M G P++ +++ F K DEA+K+ + M+ K+++ +
Sbjct: 415 QFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEP-NI 473
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
+ I+I+ M GK+ A + ++F GI T + +I GLL G EAY + +
Sbjct: 474 VHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRK 533
Query: 309 IEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
+E P+ Y+ +I+G L+ + + A ++ EM+ + + T+ MLL
Sbjct: 534 MEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLL 585
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 117/266 (43%), Gaps = 29/266 (10%)
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
+P+ +G + + + N M G ++ ++ +I ++N D A+
Sbjct: 85 RPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVS 144
Query: 234 VFQMMRVKRMDDLGL----STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSI 289
+ + +M LG+ ST+ +I+ +C GKI +A + EM +RG E + ++ ++I
Sbjct: 145 I-----LGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTI 199
Query: 290 IYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGC 345
I GL G A V +++E KPD+ Y+ +I L + R +A + EM+ RG
Sbjct: 200 INGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGI 259
Query: 346 EPTMHTYIMLLQGH--LGKRGRKG------------PDPLVNFDTIFVGGLVKAGKSLDA 391
P + TY ++ G LG+ PD + TI V GL K G +A
Sbjct: 260 PPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVT--LTILVDGLCKEGMVSEA 317
Query: 392 AKYVERVMNRGVEVPRFDYNKFLHYY 417
E + +GVE YN + Y
Sbjct: 318 RLVFETMTEKGVEPNISTYNALMDGY 343
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 153/332 (46%), Gaps = 12/332 (3%)
Query: 58 LFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALM 116
L F+ K P +S+T+N M++ + KS +D L+EM N ++ L
Sbjct: 217 LHFREMSKTCP---PDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLH 273
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKP 175
+ ++ + M GC + V+ LC+ V EA ++ K+ + +P
Sbjct: 274 GFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQP 333
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
N I YG L+ G+C VGDL A ++ MT+ G+ P+ + ++ F + N + A +V
Sbjct: 334 NVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVL 393
Query: 236 QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
QMM ++ Y +I CK GK+ +A+ +LE+M +RG D LS++I L
Sbjct: 394 QMM-IQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCK 452
Query: 296 RGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
+ A +++ PD+ Y LI L + +R EA M+K C P + T
Sbjct: 453 AAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVT 512
Query: 352 YIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLV 383
Y ++ G + R+ D + FD + G++
Sbjct: 513 YNSVVDGLC--KSRRINDAFLLFDRMRAAGVM 542
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 117/254 (46%), Gaps = 27/254 (10%)
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
PN + LI G C GD+ A ++ M G ++ + + +I+ K D A++
Sbjct: 874 SPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALE 933
Query: 234 VFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
+F+ M + TY ++D + K GK+ A ++E+M +G + +T SS+++GL
Sbjct: 934 LFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGL 993
Query: 294 LARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
G+L EA +++ + + P+I Y+ +I G +L R EA + EM+ GC+P +
Sbjct: 994 CKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNV 1053
Query: 350 HTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFD 409
TY T+ + K GK+ DA VE ++ +G F
Sbjct: 1054 VTY-----------------------TVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFT 1090
Query: 410 YNKFLHYYSNEEGV 423
YN L + ++ V
Sbjct: 1091 YNSLLDMFCKKDEV 1104
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 164/354 (46%), Gaps = 25/354 (7%)
Query: 69 CFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTF-KIALMTLAEVRELKKM 127
C + N TF ++ + ++ +I +E L+EM R + + + + L R+L
Sbjct: 872 CCSPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSA 931
Query: 128 VNFFHIMNDCG-CEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIK 185
+ F M + G C + + +V +L + V +A L+ + S+ PN + Y L+
Sbjct: 932 LELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLH 991
Query: 186 GYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD 245
G C G L EA+ + MT G P+I + +I+ K+ + DEA + + M V
Sbjct: 992 GLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEM-VDGGCQ 1050
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
+ TY +++D CK GK A ++E M ++G + T +S++ + + A ++
Sbjct: 1051 PNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQL 1110
Query: 306 VEE-IEK---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG 361
+ I+K P++ Y+ +I GL + + E + +M+ C P + T+ ++ +
Sbjct: 1111 LSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDA-MC 1169
Query: 362 KRGR-------------KGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNR 401
K R G P LV ++++ V GL K+ + D A+Y+ R M R
Sbjct: 1170 KTYRVDIAYELFNLIQESGCTPNLVTYNSL-VHGLCKS-RRFDQAEYLLREMTR 1221
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/432 (20%), Positives = 173/432 (40%), Gaps = 59/432 (13%)
Query: 56 VYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIA 114
++L Q + P + +++ +++ + K +D + +M +R N T+
Sbjct: 285 LWLLEQMVTRGCP---PDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTL 341
Query: 115 LMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWI 173
+ V +L V M + G + N ++ C+R + A + L + +
Sbjct: 342 VDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGC 401
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
P+ I Y +I G+C G L EA + M G P + + +I+ K D A +
Sbjct: 402 PPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQE 461
Query: 234 VFQM--------------------MRVKRMDDL--------------GLSTYRIVIDWMC 259
+ +M + KR+ + + TY V+D +C
Sbjct: 462 LLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLC 521
Query: 260 KRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDIS 315
K +I+ A+ + + M G+ D +T S +I+ L A+K++E +++ PD+
Sbjct: 522 KSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVV 581
Query: 316 LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG--------------HLG 361
Y LI GL + +A VF+EM+ GC P + TY L+ G +
Sbjct: 582 TYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIM 641
Query: 362 KRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEE 421
++ PD + T + GL A + +A + + + ++G R Y L
Sbjct: 642 RKQSCTPDSITY--TCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTN 699
Query: 422 GVVMFEEVGKKL 433
+ + E++ K++
Sbjct: 700 NLELVEQLLKEM 711
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 126/277 (45%), Gaps = 28/277 (10%)
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCD 189
F MN G + + +++ LC +A ++S+ P+ + Y +I G
Sbjct: 183 LFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSK 242
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
L +A ++ M D GF P++ + ++ F K N+ + A+ + + M V R +
Sbjct: 243 SDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQM-VTRGCPPDVV 301
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
+Y VI+ +CK ++ +A ++++M +RG + + +T +++ G G L A ++V ++
Sbjct: 302 SYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKM 361
Query: 310 E----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
+P+ Y+ ++ R A QV + MI+ GC P
Sbjct: 362 TERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDA---------------- 405
Query: 366 KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
+N+ TI + G KAGK +A +E+++ RG
Sbjct: 406 ------INYSTI-ISGFCKAGKLREAHDLLEQMIRRG 435
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 89/389 (22%), Positives = 164/389 (42%), Gaps = 27/389 (6%)
Query: 73 NSITFNRMVDI---IGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
N +T+ ++D GK+ + E + E G + N T+ L + E+++
Sbjct: 1052 NVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGY--VPNLFTYNSLLDMFCKKDEVERACQ 1109
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYC 188
M GC ++ N V+ LC+ V E L+ + LS P+ + + +I C
Sbjct: 1110 LLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMC 1169
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
+ A +++NL+ + G P++ + ++ K + D+A + + M K+ +
Sbjct: 1170 KTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDI 1229
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY VID +CK ++ +AY + +M G+ D++T S +I L + EA V+E
Sbjct: 1230 ITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLEL 1289
Query: 309 IEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
+ K P Y LI G + +A ++ + ++ +G P + T+ + + L KRG
Sbjct: 1290 MLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFID-WLSKRG 1348
Query: 365 -------------RKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY 410
R G P V ++T+ G A + DA E + G E Y
Sbjct: 1349 RLRQAGELLETMLRAGLVPDTVTYNTLL-KGFCDASLTEDAVDLFEVMRQCGCEPDNATY 1407
Query: 411 NKFL-HYYSNEEGVVMFEEVGKKLREVGL 438
+ H + + EV K + + G
Sbjct: 1408 TTLVGHLVDKKSYKDLLAEVSKSMVDTGF 1436
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 106/246 (43%), Gaps = 29/246 (11%)
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
+ + Y LI G+ G ++ A ++++ M +G + V ++ + +A+ F
Sbjct: 160 DTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHF 219
Query: 236 QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
+ M D TY +I+ + K ++ A +LEEM G + + +++++G
Sbjct: 220 REMSKTCPPDS--VTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCK 277
Query: 296 RGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
R+ A ++E++ PD+ Y +I GL +L + EA +V +MI+RGC+P + T
Sbjct: 278 ANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVIT 337
Query: 352 YIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
Y L V G + G A + V ++ RG YN
Sbjct: 338 YGTL-----------------------VDGFCRVGDLDGAVELVRKMTERGYRPNAITYN 374
Query: 412 KFLHYY 417
+H +
Sbjct: 375 NIMHVF 380
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 113/245 (46%), Gaps = 3/245 (1%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVN 129
A + + ++ ++ + K++ + L M + R D T+ + L + R +
Sbjct: 472 APDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFL 531
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYC 188
F M G + + V+ + C+ + A ++ ++ E P+ + Y LI G C
Sbjct: 532 LFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLC 591
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
G + +A ++ M G P++ + +I+ KINK ++A ++ ++MR + +
Sbjct: 592 KAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSI 651
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY +I+ +C ++ +A+ +L EM +G D +T +++ L L ++++E
Sbjct: 652 -TYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKE 710
Query: 309 IEKPD 313
+E +
Sbjct: 711 MEATE 715
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 124/325 (38%), Gaps = 54/325 (16%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMV 128
F +IT+ ++D K+ N+D E LQ + + D TF I + L++ L++
Sbjct: 1295 FDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAG 1354
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLI--- 184
M G N ++K C L +A L + + +P+ Y L+
Sbjct: 1355 ELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHL 1414
Query: 185 ---KGYCDVGDLIEASKIWNLMTDEGF----------EPSIDVVD------KMIETFFKI 225
K Y D+ L E SK M D GF E SI+V +++ F K
Sbjct: 1415 VDKKSYKDL--LAEVSKS---MVDTGFKLNHELSSKLEASIEVEADVRLGCAIVDMFGKC 1469
Query: 226 NKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRG------KISQAYTMLEEMFKRGI 279
+A KVF+ M R V+ W G + QA+ + M G+
Sbjct: 1470 GSPQDARKVFEGM-----------DQRNVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGV 1518
Query: 280 EADNLTLSSIIYGLLARGRLREAYKVVEEIEK-----PDISLYHGLIKGLLRLRRAREAT 334
E D +T S++ G L A I + P + + +I L RL EA
Sbjct: 1519 EPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSCVIDLLGRLGLVNEAE 1578
Query: 335 QVFREMIKRGCEPTMHTYIMLLQGH 359
+ M+ C+P+ T+ LL +
Sbjct: 1579 DL---MLGMPCKPSAATWNCLLSAY 1600
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 169/379 (44%), Gaps = 35/379 (9%)
Query: 88 RNIDLFWETLQEMG---RRRLVNDKTFKIALMT--------LAEVRE----LKKMVNFFH 132
R D+F++ L E G R + DK L+ ++ + E +K + F
Sbjct: 183 RVFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVFV 242
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVG 191
+ G ++ N + +LCQ VVEA L+L++ P+ I+Y +I GYC VG
Sbjct: 243 EFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVG 302
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTY 251
+L K+ M +G +P+ + +I K K EA +V + M + + G+ Y
Sbjct: 303 ELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGV-IY 361
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE- 310
+ID CK G +S AY + +EM KR I D +T +++I GL GR+ EA K+ E+
Sbjct: 362 TTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVC 421
Query: 311 ---KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG--- 364
+PD Y LI G + + +EA + +M++ G P + TY L G L K G
Sbjct: 422 KRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADG-LCKCGEVD 480
Query: 365 ----------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
RKG + + V GL KAG A K ++ + G Y +
Sbjct: 481 TANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLM 540
Query: 415 HYYSNEEGVVMFEEVGKKL 433
Y +V E+ +++
Sbjct: 541 DAYCKSREMVRAHELLRQM 559
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/364 (21%), Positives = 168/364 (46%), Gaps = 21/364 (5%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N+ ++N + + + + + L +M R + D ++ + +V EL++++
Sbjct: 252 NTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLI 311
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
M G + + N V+ LC+ V EA+ ++ ++ SE I P+ + Y LI G+C +
Sbjct: 312 EEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKL 371
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G++ A ++++ M P +I + + EA K+F M KR++ + T
Sbjct: 372 GNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEV-T 430
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y +ID CK GK+ +A+++ +M + G+ + +T +++ GL G + A +++ E+
Sbjct: 431 YTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMC 490
Query: 311 KPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR--- 363
+ + L Y+ L+ GL + +A ++ ++M G P TY L+ + R
Sbjct: 491 RKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMV 550
Query: 364 ----------GRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
R+ +V F+ + + G +G D K ++ ++ +G+ YN
Sbjct: 551 RAHELLRQMLDRELQPTVVTFN-VLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSL 609
Query: 414 LHYY 417
+ Y
Sbjct: 610 IKQY 613
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 161/361 (44%), Gaps = 19/361 (5%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVN 129
A + + + ++D K N+ + EM +R++ D T+ + L + + +
Sbjct: 355 APDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADK 414
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYC 188
FH M E ++ C+ + EA L ++ + + PN + Y L G C
Sbjct: 415 LFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLC 474
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
G++ A+++ + M +G E +I + ++ K D+A+K+ + M V +
Sbjct: 475 KCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAV 534
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE- 307
TY ++D CK ++ +A+ +L +M R ++ +T + ++ G G L + K+++
Sbjct: 535 -TYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKW 593
Query: 308 EIEK---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
+EK P+ + Y+ LIK R T+++R M +G P +TY +L++GH R
Sbjct: 594 MLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARN 653
Query: 365 R------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNK 412
KG + V+ + G K K L+A + E++ G+ R YN
Sbjct: 654 MKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNI 713
Query: 413 F 413
F
Sbjct: 714 F 714
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 94/219 (42%), Gaps = 11/219 (5%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMV 128
F +++T+ ++D KSR + E L++M R L TF + + L+
Sbjct: 529 FHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGE 588
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGY 187
M + G + N ++K C R + + + ++ + P+ Y LIKG+
Sbjct: 589 KLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGH 648
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C ++ EA + M +GF ++ + +I+ F+K K EA ++F+ MR + G
Sbjct: 649 CKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRRE-----G 703
Query: 248 L----STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEAD 282
L Y I D GK+ + +E ++ + D
Sbjct: 704 LVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGD 742
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 187/419 (44%), Gaps = 59/419 (14%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRR-RLVNDKTFKIALMTLAEVRELKKMVNFF 131
++ITFN +++ + I E EM +R N ++ + L + V+ F
Sbjct: 162 DAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVF 221
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
M GC+ ++ + ++ +LC+ +LV +A + ++ E I PN Y ++ G+C++
Sbjct: 222 KKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNL 281
Query: 191 GDLIEASK-----------------------------------IWNLMTDEGFEPSIDVV 215
G L EA++ ++ MT++G EP I
Sbjct: 282 GQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTY 341
Query: 216 DKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMF 275
+ +++ + +EA KVF++M +++ G +Y I+I+ CK ++ +A ++L EM+
Sbjct: 342 NALMDGYCLQRLMNEAKKVFEIM-IRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMY 400
Query: 276 KRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAR 331
+ + D +T S+++ GL GR +EA + +E+ P++ Y L+ G +
Sbjct: 401 HKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLD 460
Query: 332 EATQVFREMIKRGCEPTMHTYIMLLQGH------------LGKRGRKGPDPLVNFDTIFV 379
EA ++ + M ++ EP + Y +L++G K G P + T+ +
Sbjct: 461 EALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMI 520
Query: 380 GGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN----KFLHYYSNEEGVVMFEE-VGKKL 433
GL+K G S +A ++ + G YN FL + + + +E VGK+
Sbjct: 521 KGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRF 579
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 157/363 (43%), Gaps = 65/363 (17%)
Query: 55 PVYLFFQY------TQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND 108
P +LFF + T +P N+ F + + N + L R +N
Sbjct: 36 PCFLFFNHHHFLTSTSTKKPSLPKNNDGF------VSNNSNNVCVDDALASFYRMVRINP 89
Query: 109 KT----FKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKY 164
+ F L + A+ ++ +V+ + M+ +++ LN ++ LC+ V +
Sbjct: 90 RPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVS 149
Query: 165 LILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFF 223
++ K+ + I P+ I + LI G C+ G + EA +++N M G EP++ +I
Sbjct: 150 VLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLC 209
Query: 224 KINKDDEAMKVFQMMRVKRMDDLG----LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGI 279
K A+ VF K+M+ G + TY +ID +CK ++ A L EM +RGI
Sbjct: 210 KTGNTSMAVDVF-----KKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGI 264
Query: 280 EADNLTLSSIIYGLLARGRLREAYKVVEEI------------------------------ 309
+ T +SI++G G+L EA ++ +E+
Sbjct: 265 PPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARL 324
Query: 310 ------EK---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL 360
EK PDIS Y+ L+ G R EA +VF MI++GC P H+Y +L+ G+
Sbjct: 325 VFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYC 384
Query: 361 GKR 363
R
Sbjct: 385 KSR 387
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 142/292 (48%), Gaps = 11/292 (3%)
Query: 73 NSITFNRMVDIIGKSRNID---LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
N++TF +VD + K + L +ET+ E G ++ T+ + R + +
Sbjct: 302 NTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDIS--TYNALMDGYCLQRLMNEAKK 359
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYC 188
F IM GC N ++ C+ + + EAK L+ ++ + + P+ + Y L++G C
Sbjct: 360 VFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLC 419
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
+G EA ++ M G P++ +++ F K DEA+K+ + M+ K+++ +
Sbjct: 420 QLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEP-NI 478
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
Y I+I+ M GK+ A + ++F G D T + +I GLL G EAY + +
Sbjct: 479 VHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRK 538
Query: 309 IEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
+E P+ Y+ +I+G L+ + + A ++ EM+ + + T+ MLL
Sbjct: 539 MEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLL 590
>gi|15223927|ref|NP_177262.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169669|sp|Q9C9A2.1|PP112_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g71060, mitochondrial; Flags: Precursor
gi|12323433|gb|AAG51696.1|AC016972_15 hypothetical protein; 31939-30407 [Arabidopsis thaliana]
gi|332197036|gb|AEE35157.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 510
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/414 (21%), Positives = 193/414 (46%), Gaps = 25/414 (6%)
Query: 10 RVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPC 69
R+C IL + +S++ + L+ + L+ ++ + F++ + Q
Sbjct: 68 RICKILTK---FTDSKVETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAEN-QKG 123
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
F H + +N +++ +GK + L W + +M ++L++ +TF + A R++K+ +
Sbjct: 124 FKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYARARKVKEAIG 183
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYC 188
FH M + G + N+++ TL + + V +A+ + K+ + +P+ +Y L++G+
Sbjct: 184 AFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWG 243
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
+L+ ++ M DEGFEP + +I K K +EA++ F M +R
Sbjct: 244 QELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEME-QRNCKPSP 302
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
+ +I+ + K++ A E G + T ++++ R+ +AYK V+E
Sbjct: 303 HIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDE 362
Query: 309 IE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR- 363
+ P+ Y ++ L+R++R++EA +V++ M CEPT+ TY ++++ K
Sbjct: 363 MRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKER 419
Query: 364 -----------GRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
KG P ++ + + L K +A +Y +++ G+ P
Sbjct: 420 LDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPP 473
>gi|356560497|ref|XP_003548528.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Glycine max]
Length = 490
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 150/340 (44%), Gaps = 45/340 (13%)
Query: 21 SPESRLHSSLS--SCNF-NLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITF 77
S E LH+ + +C+F L+ + ++ + W+ F++ ++P F H+S ++
Sbjct: 54 SEEETLHTLFNDQACDFIPLSRDLVHRLLWRYKDDWKSALGVFRWAS-SRPSFRHSSESY 112
Query: 78 NRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDC 137
+ MVDI+G+ + ++ + L+EM LVN T A+ + V F +
Sbjct: 113 DMMVDILGRMKVMEKLRDLLEEMREGGLVNMNTVAKAMRRFVGAGQWVDAVRIFDDLQAL 172
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEAS 197
G E + E +N ++ TLC+ K V +A+ + L+L + I PN + I G+C + + EA
Sbjct: 173 GLEKNTESMNLLLDTLCKEKFVQQAREIFLELKQHIAPNAHTFNIFIHGWCKICRVDEAH 232
Query: 198 KIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDW 257
M GF P + +Y +I
Sbjct: 233 WTIQEMKGYGFHPCV------------------------------------ISYSTLIQC 256
Query: 258 MCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPD 313
C+ G S+ Y +L+EM +G A+ +T +SI+ L + EA KV E + +PD
Sbjct: 257 YCQEGNFSRVYELLDEMQAQGCSANVITYTSIMCALGKAKKFEEALKVPERMRSSGCRPD 316
Query: 314 ISLYHGLIKGLLRLRRAREATQVFR-EMIKRGCEPTMHTY 352
++ LI L R R +A VF+ EM K G P TY
Sbjct: 317 TLFFNSLIHTLGRAGRLDDAADVFKVEMPKAGVSPNTSTY 356
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 105/249 (42%), Gaps = 13/249 (5%)
Query: 67 QPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELK 125
PC I+++ ++ + N +E L EM + N T+ + L + ++ +
Sbjct: 244 HPCV----ISYSTLIQCYCQEGNFSRVYELLDEMQAQGCSANVITYTSIMCALGKAKKFE 299
Query: 126 KMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAK--YLILKLSEWIKPNEIAYGWL 183
+ + M GC N ++ TL + + +A + + + PN Y +
Sbjct: 300 EALKVPERMRSSGCRPDTLFFNSLIHTLGRAGRLDDAADVFKVEMPKAGVSPNTSTYNSM 359
Query: 184 IKGYCDVGDLIEASKIWNLMTDEG-FEPSIDVVDKMIETFFKINKDDEAM-KVFQMMRVK 241
I +C A +I M + G +P +I++ F+ K D + ++ M K
Sbjct: 360 ISMFCYHAQEKRALEILKEMENSGGCKPDAQTYHPLIKSCFRSGKIDGVLSEILNDMINK 419
Query: 242 RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
+ L LSTY ++I +C+ + + A+++ EEM I+ D + LL + +
Sbjct: 420 QHLSLDLSTYTLLIHGLCREDRCNWAFSLFEEM----IDQDIIPRYRTCRLLLDEVKQKN 475
Query: 302 AYKVVEEIE 310
Y+ E+IE
Sbjct: 476 MYQAAEKIE 484
>gi|297797613|ref|XP_002866691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312526|gb|EFH42950.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 638
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 180/395 (45%), Gaps = 69/395 (17%)
Query: 57 YLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRR--RLVNDKTFKIA 114
Y FF + K QP + H+ + MV I+ K R W ++EM + +L+ + F +
Sbjct: 132 YRFFVWAAK-QPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVL 190
Query: 115 LMTLAEVRELKKMVNF---------------FHIMNDCGCEY------------------ 141
+ A +KK + F + D C++
Sbjct: 191 VQRFASADMVKKAIEVLDEMPTFGLEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRLRFP 250
Query: 142 -SLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKI 199
+L ++ C+ + ++EAKY+++++ E +P+ + Y L+ GY + G + +A +
Sbjct: 251 VNLRYFTSLLYGWCREEKMMEAKYVLVQMKEAGFEPDIVDYTNLLSGYANAGKMADAYDL 310
Query: 200 WNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLSTYRIVIDWM 258
M GFEP+ +I+ K+++ +EAMKVF +M R + D + TY ++
Sbjct: 311 LKDMRRRGFEPNATCYTVLIQALCKVDRMEEAMKVFVEMERYECEAD--VVTYTALVSGF 368
Query: 259 CKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDI 314
CK GKI + Y +L++M K+G+ LT I+ + +L E +++E++++ PDI
Sbjct: 369 CKWGKIDKCYLVLDDMIKKGLMPSQLTYMHIMAAHEKKEKLIECLELMEKMKQIEYHPDI 428
Query: 315 SLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNF 374
+Y+ +I+ +L +EA +++ EM G P T++
Sbjct: 429 GIYNVVIRLACKLGEVKEAVRLWNEMEGNGLSPGADTFV--------------------- 467
Query: 375 DTIFVGGLVKAGKSLDAAKYVERVMNRGV-EVPRF 408
I + GL G L+A + + ++ RG+ VP++
Sbjct: 468 --IIINGLTSQGCLLEACDHFKEMVARGLFSVPQY 500
>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59900
gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 907
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 152/302 (50%), Gaps = 11/302 (3%)
Query: 73 NSITFNRMVDIIGKSRNI---DLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
N +N ++D + K R +L ++ + ++G R ND T+ I + +L ++
Sbjct: 366 NLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRP--NDVTYSILIDMFCRRGKLDTALS 423
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAK-YLILKLSEWIKPNEIAYGWLIKGYC 188
F M D G + S+ N ++ C+ + A+ ++ +++ ++P + Y L+ GYC
Sbjct: 424 FLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYC 483
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
G + +A ++++ MT +G PSI ++ F+ +A+K+F M +
Sbjct: 484 SKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKP-NR 542
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY ++I+ C+ G +S+A+ L+EM ++GI D + +I+GL G+ EA V+
Sbjct: 543 VTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDG 602
Query: 309 IEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
+ K + L Y GL+ G R + EA V +EM++RG + + Y +L+ G L +
Sbjct: 603 LHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKD 662
Query: 365 RK 366
RK
Sbjct: 663 RK 664
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 155/344 (45%), Gaps = 28/344 (8%)
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKP 175
+L E+++L + M GC+ ++ N ++ LC+++ V EA + L+ + +KP
Sbjct: 236 SLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKP 295
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
+ + Y L+ G C V + ++ + M F PS V ++E K K +EA+ +
Sbjct: 296 DVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNL- 354
Query: 236 QMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
VKR+ D G+S Y +ID +CK K +A + + M K G+ +++T S +I
Sbjct: 355 ----VKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILID 410
Query: 292 GLLARGRLREAYKVVEEIEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
RG+L A + E+ + L Y+ LI G + A EMI + EP
Sbjct: 411 MFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEP 470
Query: 348 TMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKY 394
T+ TY L+ G+ K G+ KG P + T + GL +AG DA K
Sbjct: 471 TVVTYTSLMGGYCSK-GKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKL 529
Query: 395 VERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
+ V+ R YN + Y E + E K++ E G+
Sbjct: 530 FNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGI 573
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 152/368 (41%), Gaps = 53/368 (14%)
Query: 123 ELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYG 181
++ K + +H M G S+ ++ L + L+ +A L +++EW +KPN + Y
Sbjct: 487 KINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYN 546
Query: 182 WLIKGYCDVGDLIEASKIWNLMTDEGFEPS-----------------------IDVVDK- 217
+I+GYC+ GD+ +A + MT++G P +D + K
Sbjct: 547 VMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKG 606
Query: 218 -----------MIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQ 266
++ F + K +EA+ V Q M V+R DL L Y ++ID K
Sbjct: 607 NCELNEICYTGLLHGFCREGKLEEALSVCQEM-VQRGVDLDLVCYGVLIDGSLKHKDRKL 665
Query: 267 AYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV----VEEIEKPDISLYHGLIK 322
+ +L+EM RG++ D++ +S+I G +EA+ + + E P+ Y +I
Sbjct: 666 FFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVIN 725
Query: 323 GLLRLRRAREATQVFREMIKRGCEPTMHTY----IMLLQGHLGKRGR--------KGPDP 370
GL + EA + +M P TY +L +G + + KG
Sbjct: 726 GLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLA 785
Query: 371 LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVG 430
+ + G + G+ +A++ + R++ GV Y ++ V E+
Sbjct: 786 NTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELW 845
Query: 431 KKLREVGL 438
+ E G+
Sbjct: 846 NSMTEKGI 853
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 115/245 (46%), Gaps = 19/245 (7%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTL-AEVRELKKMVNFFHI 133
+ + ++D K ++ LF+ L+EM R L D +++ ++ + K+ + +
Sbjct: 648 VCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDL 707
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIK-PNEIAYGW----LIKGYC 188
M + GC + V+ LC+ V EA+ L K+ PN++ YG L KG
Sbjct: 708 MINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEV 767
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
D+ +E + N + +G + + +I F + + +EA ++ + RM G+
Sbjct: 768 DMQKAVE---LHNAIL-KGLLANTATYNMLIRGFCRQGRIEEASEL-----ITRMIGDGV 818
Query: 249 S----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK 304
S TY +I+ +C+R + +A + M ++GI D + +++I+G G + +A +
Sbjct: 819 SPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATE 878
Query: 305 VVEEI 309
+ E+
Sbjct: 879 LRNEM 883
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 38/217 (17%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
+KP+++ Y +I GD EA IW+LM +EG P+ +I K +EA
Sbjct: 678 LKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAE 737
Query: 233 KVFQMMR------------------VKRMDDL------------GL----STYRIVIDWM 258
+ M+ K D+ GL +TY ++I
Sbjct: 738 VLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGF 797
Query: 259 CKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV----VEEIEKPDI 314
C++G+I +A ++ M G+ D +T +++I L R +++A ++ E+ +PD
Sbjct: 798 CRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDR 857
Query: 315 SLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
Y+ LI G +AT++ EM+++G P T
Sbjct: 858 VAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/262 (19%), Positives = 117/262 (44%), Gaps = 28/262 (10%)
Query: 196 ASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVI 255
A +++N M G P + + +I + ++ A ++ M D + + Y ++I
Sbjct: 211 AMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCD-VNIVPYNVLI 269
Query: 256 DWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----K 311
D +CK+ K+ +A + +++ + ++ D +T +++YGL ++++E+
Sbjct: 270 DGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFS 329
Query: 312 PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPL 371
P + L++GL + + EA + + ++ G P + Y L+ +GRK +
Sbjct: 330 PSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLC--KGRKFHEAE 387
Query: 372 VNFD--------------TIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
+ FD +I + + GK A ++ +++ G+++ + YN ++ +
Sbjct: 388 LLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGH 447
Query: 418 ------SNEEGVVMFEEVGKKL 433
S EG M E + KKL
Sbjct: 448 CKFGDISAAEG-FMAEMINKKL 468
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 64 QKAQPCFA-HNSITFNRMVDIIGKSR-NIDLFWETLQEMGRRRLVNDKTFKIALMTLAEV 121
K QP + N +T+ +DI+ K ++ E + + L N T+ + +
Sbjct: 741 SKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQ 800
Query: 122 RELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAY 180
+++ M G ++ LC+R V +A L ++E I+P+ +AY
Sbjct: 801 GRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAY 860
Query: 181 GWLIKGYCDVGDLIEASKIWNLMTDEGFEPS 211
LI G C G++ +A+++ N M +G P+
Sbjct: 861 NTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 167/346 (48%), Gaps = 21/346 (6%)
Query: 77 FNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIMN 135
+N ++D + K + + + EM + + D T+ + +LK+ + + M
Sbjct: 202 YNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMV 261
Query: 136 DCGCEYSLEMLNKVVKTLCQRKLVVEAK-YLILKLSEWIKPNEIAYGWLIKGYCDVGDLI 194
++ N +V LC+ V EAK L + L +KP+ I Y L+ GY V +L
Sbjct: 262 LKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELK 321
Query: 195 EASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIV 254
+A ++N M+ G P + +I F K DEA+ +F+ M K M G+ TY +
Sbjct: 322 KAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVP-GIVTYSSL 380
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE---- 310
ID +CK G+IS + +++EM RGI A+ +T +S+I GL G L A + +++
Sbjct: 381 IDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGI 440
Query: 311 KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH----------- 359
+P + L+ GL + R ++A + F++++ +G ++ Y +++ GH
Sbjct: 441 RPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALT 500
Query: 360 -LGKRGRKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
L K G P V FD I + L K ++ A K + +++ RG+
Sbjct: 501 MLSKMEENGCVPNAVTFD-IIINALFKKDENDKAEKLLRQMICRGL 545
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 139/313 (44%), Gaps = 19/313 (6%)
Query: 111 FKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-L 169
F L + A+++ V+ H + G + L LN ++ C + ++ K L
Sbjct: 62 FNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKIL 121
Query: 170 SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD 229
+P+ I + LIKG C G + +A + + +G + +I KI
Sbjct: 122 KRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTR 181
Query: 230 EAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSI 289
A+K+ + + R+ + Y +ID +CK +S+AY + EM +GI AD +T +++
Sbjct: 182 GAIKLVRKID-GRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTL 240
Query: 290 IYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGC 345
IYG +L+EA ++ E+ P++ Y+ L+ L + + +EA V M+K
Sbjct: 241 IYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACV 300
Query: 346 EPTMHTYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAK 393
+P + TY L+ G+ G P V+ TI + G K K +D A
Sbjct: 301 KPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCK-NKMVDEAL 359
Query: 394 YVERVMNRGVEVP 406
+ + M++ VP
Sbjct: 360 NLFKEMHQKNMVP 372
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 152/373 (40%), Gaps = 94/373 (25%)
Query: 149 VVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGD--------------- 192
++K LC + V +A + KL ++ IK ++++YG LI G C +GD
Sbjct: 135 LIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRL 194
Query: 193 --------------------LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
+ EA +++ MT +G + +I F +K EA+
Sbjct: 195 TKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAI 254
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
+ M +K ++ + TY I++D +CK GK+ +A +L M K ++ D +T S+++ G
Sbjct: 255 GLLNEMVLKTINP-NVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDG 313
Query: 293 LLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
L++A V + PD+ Y LI G + + EA +F+EM ++ P
Sbjct: 314 YFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPG 373
Query: 349 MHTYIMLLQGHLGKRGRKG--------------PDPLVNFD------------------- 375
+ TY L+ G L K GR P ++ ++
Sbjct: 374 IVTYSSLIDG-LCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALF 432
Query: 376 ---------------TIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN- 419
TI + GL K G+ DA + + ++ +G + + YN ++ +
Sbjct: 433 NKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQ 492
Query: 420 ---EEGVVMFEEV 429
EE + M ++
Sbjct: 493 GLLEEALTMLSKM 505
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 81/169 (47%), Gaps = 8/169 (4%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHI 133
+T++ ++D + KS I W+ + EM R + N T+ + L + L + + F+
Sbjct: 375 VTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNK 434
Query: 134 MNDCG---CEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCD 189
M D G C ++ +L + LC+ + +A+ L++ + Y +I G+C
Sbjct: 435 MKDQGIRPCSFTFTIL---LDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCK 491
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
G L EA + + M + G P+ D +I FK +++D+A K+ + M
Sbjct: 492 QGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQM 540
>gi|224084978|ref|XP_002307458.1| predicted protein [Populus trichocarpa]
gi|222856907|gb|EEE94454.1| predicted protein [Populus trichocarpa]
Length = 440
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 171/370 (46%), Gaps = 38/370 (10%)
Query: 26 LHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIG 85
L ++L ++ + + F + Y FF++ +K Q + H+ F+ ++D +
Sbjct: 9 LDTALDQSGVRVSEQIVEDVLKKFENAGMVAYRFFEWAEK-QRHYNHSVKAFHTVIDSLA 67
Query: 86 KSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEM 145
K R L W+ ++ M +R+VN +TF I + A +++++ V F+IM+ +L
Sbjct: 68 KIRQYQLMWDVVKVMKSKRMVNVETFCIIMRKYARAQKVEEAVYTFNIMDKYDVPPNLAA 127
Query: 146 LNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N ++ LC+ K V +A+ + + + P+ Y L++G+ +L +A +I+ M
Sbjct: 128 FNGLLSALCKSKNVRKAQEIFDSIKDRFVPDSKTYSILLEGWGKDPNLPKAREIFREMVS 187
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM-----------------------RVK- 241
G P I M++ K + DEA+ + M R++
Sbjct: 188 NGCRPDIVTYGIMVDVLCKAGRVDEALGIVNEMDSTVCKPTPFIYSVLVHTYGIENRIED 247
Query: 242 ------RMDDLGL----STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
M++ G+ + Y +I CK ++ Y +L EM +G+ ++ T + I+
Sbjct: 248 AVSTFLEMENNGIEPDVAVYNALIGAFCKANRLKNVYRVLNEMDCKGVTPNSRTFNIILS 307
Query: 292 GLLARGRLREAYKV---VEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
L+ RG EAY+V + ++ +PD Y +IK ++A +V++ M + P+
Sbjct: 308 SLIGRGETDEAYRVFLRMIKVCEPDADTYTMMIKMFCERDELKKALKVWKYMKLKRFMPS 367
Query: 349 MHTYIMLLQG 358
MHT+ +L+ G
Sbjct: 368 MHTFQVLING 377
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 113/228 (49%), Gaps = 8/228 (3%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKT---FKIALMTLAEVRELKKMVNFF 131
+T+ MVD++ K+ +D + EM V T + + + T ++ V+ F
Sbjct: 195 VTYGIMVDVLCKAGRVDEALGIVNEMDS--TVCKPTPFIYSVLVHTYGIENRIEDAVSTF 252
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDV 190
M + G E + + N ++ C+ + ++ ++ + + PN + ++
Sbjct: 253 LEMENNGIEPDVAVYNALIGAFCKANRLKNVYRVLNEMDCKGVTPNSRTFNIILSSLIGR 312
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G+ EA +++ M + EP D MI+ F + ++ +A+KV++ M++KR + T
Sbjct: 313 GETDEAYRVFLRMI-KVCEPDADTYTMMIKMFCERDELKKALKVWKYMKLKRFMP-SMHT 370
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR 298
++++I+ +C++G ++QA +LEEM ++GI +T + L+ GR
Sbjct: 371 FQVLINGLCEKGDVTQACVLLEEMIEKGIRPSGVTFGRLRQLLIKEGR 418
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 90/216 (41%), Gaps = 28/216 (12%)
Query: 208 FEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQA 267
+ S+ +I++ KI + V ++M+ KRM + + T+ I++ + K+ +A
Sbjct: 52 YNHSVKAFHTVIDSLAKIRQYQLMWDVVKVMKSKRM--VNVETFCIIMRKYARAQKVEEA 109
Query: 268 YTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK---PDISLYHGLIKGL 324
M K + + + ++ L +R+A ++ + I+ PD Y L++G
Sbjct: 110 VYTFNIMDKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDSIKDRFVPDSKTYSILLEGW 169
Query: 325 LRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVK 384
+ +A ++FREM+ GC P + TY I V L K
Sbjct: 170 GKDPNLPKAREIFREMVSNGCRPDIVTY-----------------------GIMVDVLCK 206
Query: 385 AGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE 420
AG+ +A V + + + F Y+ +H Y E
Sbjct: 207 AGRVDEALGIVNEMDSTVCKPTPFIYSVLVHTYGIE 242
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 69/159 (43%), Gaps = 9/159 (5%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHIM 134
+N ++ K+ + + L EM + + N +TF I L +L E + F M
Sbjct: 266 VYNALIGAFCKANRLKNVYRVLNEMDCKGVTPNSRTFNIILSSLIGRGETDEAYRVFLRM 325
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEA----KYLILKLSEWIKPNEIAYGWLIKGYCDV 190
CE + ++K C+R + +A KY+ LK P+ + LI G C+
Sbjct: 326 IKV-CEPDADTYTMMIKMFCERDELKKALKVWKYMKLKR---FMPSMHTFQVLINGLCEK 381
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD 229
GD+ +A + M ++G PS ++ + K ++D
Sbjct: 382 GDVTQACVLLEEMIEKGIRPSGVTFGRLRQLLIKEGRED 420
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 179/401 (44%), Gaps = 42/401 (10%)
Query: 49 FPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND 108
PL P L A P +++++N ++ + + +D L+ M +
Sbjct: 38 LPLPESPALL------SALPSV-RDAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLAS 90
Query: 109 KTFKIALMTLAEV----RELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKY 164
+ I+ TL R + V M DCG + +++ LC V A
Sbjct: 91 RPNAISYTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVE 150
Query: 165 LILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFF 223
L+ ++ E I+PN + Y L+ GYC G K++ M+ G EP + + +I++
Sbjct: 151 LLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLC 210
Query: 224 KINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADN 283
+ K +A +V MM +R + + TY ++I+ MCK G + +A + + M ++G++ D
Sbjct: 211 RHGKVKKAARVMDMM-TERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDV 269
Query: 284 LTLSSIIYGLLARGRLREAYKVVEEIE------KPDISLYHGLIKGLLRLRRAREATQVF 337
+T +++I GL + + EA ++EE+ +PD+ ++ +I GL ++ R+A QV
Sbjct: 270 VTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVR 329
Query: 338 REMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVER 397
M + GC LV F+ + +GGL++ K A + ++
Sbjct: 330 AMMAENGCRCN----------------------LVAFN-LLIGGLLRVHKVKKAMELMDE 366
Query: 398 VMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
+ + G++ F Y+ ++ + V E ++R G+
Sbjct: 367 MASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGM 407
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 183/400 (45%), Gaps = 24/400 (6%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHI 133
+T+ ++ + + ++D E L EM + N + L + + + F
Sbjct: 130 VTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEE 189
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M+ G E + M ++ +LC+ V +A ++ ++E ++PN + Y LI C G
Sbjct: 190 MSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGS 249
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ-MMRVKRMDDLGLSTY 251
+ EA + M+++G +P + + +I + + DEAM + + MM+ + L T+
Sbjct: 250 VREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTF 309
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE- 310
VI +CK G + QA + M + G + + + +I GLL ++++A ++++E+
Sbjct: 310 NSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMAS 369
Query: 311 ---KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL-----QGHLGK 362
+PD Y LI G ++R+ A EM +G EP YI LL QG +G+
Sbjct: 370 SGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQ 429
Query: 363 R-------GRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
R + T+ + G K+G+ A ++++ +++ G+ Y+ ++
Sbjct: 430 ARDLFNEMDRNCKLDAAAYSTM-IHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPIN 488
Query: 416 YYSNEEGVVMFEEVGKKLREVG-LADLA---DIFQRYGKK 451
++ + E V K++ G + D+A + Q YG K
Sbjct: 489 MFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAK 528
Score = 41.6 bits (96), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 38/212 (17%), Positives = 80/212 (37%), Gaps = 39/212 (18%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N + FN ++ + + + E + EM L D T+ I + ++R++++ ++
Sbjct: 340 NLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYL 399
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAK---------------------------- 163
M G E ++K +C + ++ +A+
Sbjct: 400 SEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRNCKLDAAAYSTMIHGAFKSG 459
Query: 164 -------YLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVD 216
+L + E + P+ + Y I + GDL A ++ MT GF P + V D
Sbjct: 460 EKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFD 519
Query: 217 KMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
+I+ + + K+ ++ R D+ L
Sbjct: 520 SLIQGY---GAKGDTEKILELTREMTAKDVAL 548
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 169/366 (46%), Gaps = 27/366 (7%)
Query: 76 TFNRMVDIIGKS---RNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
TFN ++ + K+ R L E + G R ++KTF + E +++ +
Sbjct: 201 TFNILIRALCKAHQLRPAILMLEDMPNYGLRP--DEKTFTTLMQGFIEEADVEGALRIKE 258
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGD 192
+M + GCE + +N +V LC+ + EA I + E P+++ + L+ G C G
Sbjct: 259 LMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYE-EEGFCPDQVTFNALVNGLCRTGH 317
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ + ++ + M ++GFE + + +I K+ + DEA+++ M V R + TY
Sbjct: 318 IKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHM-VSRDCEPNTVTYN 376
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK- 311
+I +CK + A + + +G+ D T +S+I GL A ++ EE+++
Sbjct: 377 TLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEK 436
Query: 312 ---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGP 368
PD Y LI+ L RR +EA + +EM GC + Y L+ G L K R G
Sbjct: 437 GCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDG-LCKNNRVG- 494
Query: 369 DPLVNFDTI--------------FVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
D FD + + GL K+ + +AA+ +++++ G++ +F Y L
Sbjct: 495 DAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTML 554
Query: 415 HYYSNE 420
Y+ +
Sbjct: 555 KYFCQQ 560
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 163/345 (47%), Gaps = 24/345 (6%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
TF + L +K+ + M + G E + N ++ LC+ + EA ++ +
Sbjct: 304 TFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHM 363
Query: 170 -SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
S +PN + Y LI C + A+++ ++T +G P + + +I+ +
Sbjct: 364 VSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNR 423
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
+ AM++F+ M+ K D TY I+I+ +C ++ +A +L+EM G + + ++
Sbjct: 424 EIAMELFEEMKEKGCDPDEF-TYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNT 482
Query: 289 IIYGLLARGRLREAYKVVEEIEKPDIS----LYHGLIKGLLRLRRAREATQVFREMIKRG 344
+I GL R+ +A + +++E +S Y+ LI GL + +R EA Q+ +MI G
Sbjct: 483 LIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEG 542
Query: 345 CEPTMHTYIMLL-----QGHLGKRGR-------KGPDP-LVNFDTIFVGGLVKAGKSLDA 391
+P TY +L QG + + G +P +V + T+ +GGL KAG+ A
Sbjct: 543 LKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTL-IGGLCKAGRVDVA 601
Query: 392 AKYVERVMNRGVEVPRFDYNKFLHYYS----NEEGVVMFEEVGKK 432
+K + V +G+ + YN + +E + +F E+ +K
Sbjct: 602 SKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEK 646
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 136/311 (43%), Gaps = 43/311 (13%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIM 134
TFN ++ + + N ++ E +EM + D+ T+ I + +L R LK+ + M
Sbjct: 409 TFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEM 468
Query: 135 NDCGCEYS--------------------------LEML---------NKVVKTLCQRKLV 159
GC + +EML N ++ LC+ K V
Sbjct: 469 ELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRV 528
Query: 160 VEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKM 218
EA L+ ++ E +KP++ Y ++K +C GD+ A+ I MT G EP I +
Sbjct: 529 EEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTL 588
Query: 219 IETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRG 278
I K + D A K+ + +++K M L Y VI +CKR + +A + EM ++G
Sbjct: 589 IGGLCKAGRVDVASKLLRSVQMKGM-VLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKG 647
Query: 279 IEADNLTLSSIIYGLL-ARGRLREAYK-VVEEIEK---PDISLYHGLIKGLLRLRRAREA 333
D +T + GL G ++EA VE +EK P+ + L +GL L
Sbjct: 648 DPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTL 707
Query: 334 TQVFREMIKRG 344
Q+ ++++G
Sbjct: 708 IQLINMVMEKG 718
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/343 (20%), Positives = 151/343 (44%), Gaps = 47/343 (13%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMT 117
FQ+ AQP ++ + F+ ++ + ++ + D L++M ++ V++ TF I L T
Sbjct: 78 LFQWA-SAQPNYSAHPSVFHELLRQLARAGSFDSMLTLLRQMHSSKIPVDESTFLIFLET 136
Query: 118 LAEVRELKKMVN-----------------FFHI--------------------MNDCGCE 140
A L +N F+++ M
Sbjct: 137 YATSHHLHAEINPLFLLMERDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVP 196
Query: 141 YSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKI 199
+ N +++ LC+ + A ++ + + ++P+E + L++G+ + D+ A +I
Sbjct: 197 PDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRI 256
Query: 200 WNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMC 259
LM + G E + V+ ++ K + +EA++ D + T+ +++ +C
Sbjct: 257 KELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYEEEGFCPDQV---TFNALVNGLC 313
Query: 260 KRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDIS 315
+ G I Q M++ M ++G E D T +S+I GL G + EA +++ + +P+
Sbjct: 314 RTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTV 373
Query: 316 LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
Y+ LI L + AT++ R + +G P + T+ L+QG
Sbjct: 374 TYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQG 416
>gi|15239161|ref|NP_201383.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170571|sp|Q9FH87.1|PP447_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g65820
gi|9758569|dbj|BAB09050.1| unnamed protein product [Arabidopsis thaliana]
gi|332010728|gb|AED98111.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 162/344 (47%), Gaps = 45/344 (13%)
Query: 57 YLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRR--RLVNDKTFKIA 114
Y FF + K QP + H+ + MV I+ K R W ++EM + +L+ + F +
Sbjct: 131 YRFFVWAAK-QPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVL 189
Query: 115 LMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLV--------------- 159
+ A +KK + M G E + ++ LC+ V
Sbjct: 190 VQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFP 249
Query: 160 -------------------VEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKI 199
+EAKY++++++E +P+ + Y L+ GY + G + +A +
Sbjct: 250 VNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDL 309
Query: 200 WNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLSTYRIVIDWM 258
M GFEP+ + +I+ K+++ +EAMKVF +M R + D + TY ++
Sbjct: 310 LRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEAD--VVTYTALVSGF 367
Query: 259 CKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDI 314
CK GKI + Y +L++M K+G+ LT I+ + E +++E++ + PDI
Sbjct: 368 CKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDI 427
Query: 315 SLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+Y+ +I+ +L +EA +++ EM + G P + T+++++ G
Sbjct: 428 GIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMING 471
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 88/182 (48%), Gaps = 7/182 (3%)
Query: 126 KMVNFFHIMNDC---GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYG 181
KM + + ++ D G E + +++ LC+ + EA + +++ + + + + Y
Sbjct: 302 KMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYT 361
Query: 182 WLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR-V 240
L+ G+C G + + + + M +G PS ++ K +E +++ + MR +
Sbjct: 362 ALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQI 421
Query: 241 KRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
+ D+G+ Y +VI CK G++ +A + EM + G+ T +I GL ++G L
Sbjct: 422 EYHPDIGI--YNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLL 479
Query: 301 EA 302
EA
Sbjct: 480 EA 481
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 79/197 (40%), Gaps = 26/197 (13%)
Query: 211 SIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTM 270
SI+V M++ K+ + + + MR + + + +++ + +A +
Sbjct: 146 SIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEV 205
Query: 271 LEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE---KPDISLYHGLIKGLLRL 327
L+EM K G E D ++ L G +++A K+ E++ ++ + L+ G R+
Sbjct: 206 LDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRV 265
Query: 328 RRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGK 387
+ EA V +M + G EP + Y LL G+ AGK
Sbjct: 266 GKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGY-----------------------ANAGK 302
Query: 388 SLDAAKYVERVMNRGVE 404
DA + + RG E
Sbjct: 303 MADAYDLLRDMRRRGFE 319
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 58/306 (18%), Positives = 128/306 (41%), Gaps = 12/306 (3%)
Query: 63 TQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEV 121
Q + F + + + ++ + + ++ L++M RR N + + + L +V
Sbjct: 276 VQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKV 335
Query: 122 RELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK--LSEWIKPNEIA 179
+++ + F M CE + +V C+ ++ Y++L + + + P+E+
Sbjct: 336 DRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWG-KIDKCYIVLDDMIKKGLMPSELT 394
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
Y ++ + E ++ M + P I + + +I K+ + EA++++ M
Sbjct: 395 YMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEME 454
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNL--TLSSIIYGLLARG 297
+ G+ T+ I+I+ + +G + +A +EM RG+ + + TL ++ +L
Sbjct: 455 ENGLSP-GVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDK 513
Query: 298 RLREAYKVVEEIEKPDISLYHGL-----IKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
+L A V I + L I L +EA EMI+ P T+
Sbjct: 514 KLEMAKDVWSCITSKGACELNVLSWTIWIHALFSKGYEKEACSYCIEMIEMDFMPQPDTF 573
Query: 353 IMLLQG 358
L++G
Sbjct: 574 AKLMKG 579
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 143/297 (48%), Gaps = 10/297 (3%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIM 134
T + ++D + +DL + +M + L D TF + L +V + + V FF
Sbjct: 132 TLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDF 191
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDL 193
GC+ ++ ++ LC+ A L K+ E +PN + Y LI C +
Sbjct: 192 EASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLV 251
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLSTYR 252
EA I++ M + P I + +I+ + EA + +M + M ++ T+
Sbjct: 252 NEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNI--FTFN 309
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI--- 309
+++D +CK GK+S+A + + M + G+E D +T SS++YG R + EA K+ + +
Sbjct: 310 VLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITK 369
Query: 310 -EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
KPD Y+ LIKG + +R EA Q+F EMI +G P Y L+ G L + GR
Sbjct: 370 GCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHG-LCQLGR 425
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 171/403 (42%), Gaps = 62/403 (15%)
Query: 73 NSITFNRMVD---IIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
+++TFN +++ +GK F++ + G + V T+ + L ++ E
Sbjct: 164 DAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTV--YTYTTIINGLCKIGETTAAAG 221
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYC 188
F M + GC+ ++ N ++ +LC+ KLV EA + + ++ I P+ Y LI+G C
Sbjct: 222 LFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLC 281
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM---------- 238
+ EAS + N MT P+I + +++ K K EA VF+ M
Sbjct: 282 NFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVV 341
Query: 239 ----------------RVKRMDDLGLS--------TYRIVIDWMCKRGKISQAYTMLEEM 274
+++ D ++ +Y I+I CK +I +A + EM
Sbjct: 342 TYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEM 401
Query: 275 FKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRA 330
+G+ DN+ +++I+GL GRLREA + + + PD+ Y L+ G +
Sbjct: 402 IHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYL 461
Query: 331 REATQVFREMIKRGCEPTMHTYIMLLQ-----GHLGKRGRK--------GPDPLVNFDTI 377
+A ++FR M +P + Y +L+ G+L K RK G P V T
Sbjct: 462 GKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNL-KDARKLFSELFVQGLLPNVQIYTT 520
Query: 378 FVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN----KFLHY 416
+ L K G +A + + G F YN FL Y
Sbjct: 521 IINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQY 563
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 132/281 (46%), Gaps = 13/281 (4%)
Query: 73 NSITFNRMVDII---GKSRNIDLFWETLQEMG-RRRLVNDKTFKIALMTLAEVRELKKMV 128
N TFN +VD I GK ++T+ EMG +V + E+ E +K+
Sbjct: 304 NIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKL- 362
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGY 187
F M GC+ N ++K C+ K + EAK L ++ + + P+ + Y LI G
Sbjct: 363 --FDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGL 420
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C +G L EA ++ M G P + +++ F K +A ++F++M+ +
Sbjct: 421 CQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKP-D 479
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
++ Y I+ID MCK G + A + E+F +G+ + ++II L G L EA +
Sbjct: 480 IAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFR 539
Query: 308 EIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+E PD Y+ +I+G L+ + A Q+ EM RG
Sbjct: 540 NMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRG 580
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 106/248 (42%), Gaps = 28/248 (11%)
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS- 249
G +I SK L G P I + +I+ F + + D A VF +M LGL
Sbjct: 112 GAVISLSKQMEL---AGLSPDIYTLSILIDCFSHLQRVDLAFSVFS-----KMIKLGLQP 163
Query: 250 ---TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
T+ +I+ +CK GK +QA ++ G + T ++II GL G A +
Sbjct: 164 DAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLF 223
Query: 307 EEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
+++E +P++ Y+ LI L + + EA +F M + P + TY L+QG
Sbjct: 224 KKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNF 283
Query: 363 RGRKGPDPLVNFDT------------IFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY 410
R K L+N T + V + K GK +A + + GVE Y
Sbjct: 284 RRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTY 343
Query: 411 NKFLHYYS 418
+ ++ YS
Sbjct: 344 SSLMYGYS 351
>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 739
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 157/361 (43%), Gaps = 51/361 (14%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLIL-K 168
T+ L L +++ ++ F M GC + +V LC EA+ L+
Sbjct: 144 TYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDA 203
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++E +PN + Y LI GYC+VGDL A ++ M G P++ ++I F K K
Sbjct: 204 MAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKL 263
Query: 229 DEAMKVFQMM------------------------------RVKRMDDLGLS----TYRIV 254
D AM +F M ++ M++ GL T ++
Sbjct: 264 DRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVL 323
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK--- 311
ID +CK ++ +A +L + ++GI+ + + +S+I GL GR A ++++ +
Sbjct: 324 IDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGF 383
Query: 312 -PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML---LQGHLGKRGRK- 366
PD Y LI GL R + EA V +M+++G +P+ TY ++ L +G G K
Sbjct: 384 VPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKK 443
Query: 367 --------GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYS 418
G P V TIFV G+ DA + +++ GV YN + Y+
Sbjct: 444 ILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYA 503
Query: 419 N 419
N
Sbjct: 504 N 504
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 7/208 (3%)
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
Y LI YC GDL + + + + GF P + + + A ++F +M
Sbjct: 75 YTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMP 134
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
++ TY ++ +C G + +A ++ M G D +++++GL GR
Sbjct: 135 LRGCVRTAF-TYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRT 193
Query: 300 REAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
REA ++ + +P++ +Y+ LI G + A VF M GC P + TY L
Sbjct: 194 REAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTEL 253
Query: 356 LQGHLGKRGRKGPDPLVNFDTIFVGGLV 383
+ G + RK ++ F + GLV
Sbjct: 254 ISGFC--KSRKLDRAMMLFSRMVDAGLV 279
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 9/167 (5%)
Query: 159 VVEAKYLILKLSEWIK---PNEI-AYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDV 214
+ E KYL L E +K P+EI Y + C V L EA + M PS DV
Sbjct: 556 IAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDV 615
Query: 215 VDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEM 274
+I ++ EA+ M VK L +YR +I +C+ G I A + +M
Sbjct: 616 YTSIIACCCRLKMLTEALTFVDSM-VKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDM 674
Query: 275 FKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLY 317
+ + + +I GLL +G + E ++ +E +P +LY
Sbjct: 675 LSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKNYRPSDALY 721
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/302 (19%), Positives = 121/302 (40%), Gaps = 23/302 (7%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N I + ++D + K+ +Q + + V D T+ + L +EL + +
Sbjct: 351 NEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVL 410
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
M + G + S ++ L + +K ++ K+ + IKP+ Y ++ YC
Sbjct: 411 DDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHE 470
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G + +A + M D G P++ + +I + + +A F+ M V +
Sbjct: 471 GRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHM-VANGCKPNEES 529
Query: 251 YRIVIDWMCKR----------------GKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
Y +++ + K+ ++ + +LEEM K + ++ + + L
Sbjct: 530 YTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLC 589
Query: 295 ARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
RL EA ++ E++ P +Y +I RL+ EA M+K G P +
Sbjct: 590 RVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLE 649
Query: 351 TY 352
+Y
Sbjct: 650 SY 651
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 67/178 (37%), Gaps = 25/178 (14%)
Query: 273 EMFKRGIEADNL-TLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRL 327
E F + A NL T +++I G L + + + + + PD Y + G R
Sbjct: 61 ESFASRMPARNLRTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRA 120
Query: 328 RRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG--------------KRGRKGPDPLVN 373
A ++F M RGC T TY LL G G + PDP V
Sbjct: 121 GLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVY 180
Query: 374 FDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN----EEGVVMFE 427
V GL AG++ +A + M G E YN + Y N E V +FE
Sbjct: 181 --ATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFE 236
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 137/288 (47%), Gaps = 25/288 (8%)
Query: 160 VEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMI 219
V +Y LS I PN + Y LIKG+CDVG+ +EA + M ++G P I +I
Sbjct: 574 VAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAII 633
Query: 220 ETFFKINKDDEAMKVF-QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRG 278
+ K K EAM VF + ++ + D+ L Y +I CK G I +A + +EM G
Sbjct: 634 HSLSKNGKTKEAMGVFLKFLKTGVVPDVFL--YNSLISGFCKEGDIEKASQLYDEMLHNG 691
Query: 279 IEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREAT 334
I + + +++I GL G + +A ++ +EIE+ PD+ Y +I G + EA
Sbjct: 692 INPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAF 751
Query: 335 QVFREMIKRGCEPTMHTYIMLLQGHLGKRG-------------RKGPDPLVNFDTIFVGG 381
++F EMI +G P + Y +L+ G GK G +K L F+++ +
Sbjct: 752 KLFDEMISKGISPDGYIYCILIDG-CGKEGNLEKALSLFHEAQQKSVGSLSAFNSL-IDS 809
Query: 382 LVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEV 429
K GK ++A + + ++++ + Y + Y E M EE
Sbjct: 810 FCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAE---MMEEA 854
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 106/214 (49%), Gaps = 5/214 (2%)
Query: 149 VVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGF 208
V+K C+ V++ K ++ ++ + KPN Y I G C G + EA ++ LM ++G
Sbjct: 248 VIKAHCKVGDVIKGKMVLSEMEKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGL 307
Query: 209 EPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAY 268
P +++ F K + EA +F+ M ++ TY +ID K G I +A
Sbjct: 308 GPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNP-NRFTYTALIDGFIKEGNIEEAL 366
Query: 269 TMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGL 324
+ +EM RG++ + +T +++I G+ G + +A + E+ +PD Y+ LI G
Sbjct: 367 RIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGY 426
Query: 325 LRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
L+ +A ++ EM R P+ TY +L+ G
Sbjct: 427 LKSHDMAKACELLAEMKARKLTPSPFTYSVLISG 460
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 166/379 (43%), Gaps = 21/379 (5%)
Query: 78 NRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHIMND 136
N M D++ K+ + LFW+ M ++V D T+ + +V ++ K M
Sbjct: 212 NLMRDLL-KANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEK 270
Query: 137 CGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIE 195
C+ +L N + LCQ V EA + L + + + P+ Y L+ G+C E
Sbjct: 271 -ECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKE 329
Query: 196 ASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVI 255
A I+ M G P+ +I+ F K +EA+++ M + R L + TY +I
Sbjct: 330 AKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEM-ITRGLKLNVVTYNAMI 388
Query: 256 DWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK---- 311
+ K G++++A ++ EM G+E D T + +I G L + +A +++ E++
Sbjct: 389 GGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLT 448
Query: 312 PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG------- 364
P Y LI GL ++A +V +MI+ G +P + Y L++ ++ +
Sbjct: 449 PSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIEL 508
Query: 365 -----RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN 419
G P + + GL +A K +A + + +G++ Y F++ YS
Sbjct: 509 LKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSK 568
Query: 420 EEGVVMFEEVGKKLREVGL 438
+ + E K + G+
Sbjct: 569 SGEIQVAERYFKDMLSSGI 587
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 124/271 (45%), Gaps = 27/271 (9%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++ +K N + Y +I G G++ +A ++N M G EP + +I+ + K +
Sbjct: 373 ITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDM 432
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
+A ++ M+ +++ TY ++I +C + +A +L++M + G++ +
Sbjct: 433 AKACELLAEMKARKLTPSPF-TYSVLISGLCHSSDLQKANEVLDQMIRNGVKPN-----V 486
Query: 289 IIYGLLARGRLREA-YKVVEEIEK--------PDISLYHGLIKGLLRLRRAREATQVFRE 339
+YG L + ++E+ Y++ E+ K PD+ Y+ LI GL R ++ EA + +
Sbjct: 487 FMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVD 546
Query: 340 MIKRGCEPTMHTY------------IMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGK 387
M ++G +P HTY I + + + G P TI + G G
Sbjct: 547 MGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGN 606
Query: 388 SLDAAKYVERVMNRGVEVPRFDYNKFLHYYS 418
+++A + ++ +G+ Y+ +H S
Sbjct: 607 TVEALSTFKCMLEKGLIPDIRAYSAIIHSLS 637
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 143/337 (42%), Gaps = 57/337 (16%)
Query: 123 ELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYG 181
+++K + M G ++ + N ++ LC+ V +A+ L ++ E + P+ + Y
Sbjct: 676 DIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYS 735
Query: 182 WLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK 241
+I GYC G+L EA K+++ M +G P + +I+ K ++A+ +F + K
Sbjct: 736 TIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQK 795
Query: 242 RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
+ LS + +ID CK GK+ +A + ++M + +
Sbjct: 796 SVG--SLSAFNSLIDSFCKHGKVIEARELFDDMVDKKL---------------------- 831
Query: 302 AYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH-- 359
P+I Y LI + EA Q+F +M R P TY LL +
Sbjct: 832 ---------TPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQ 882
Query: 360 LGKRGR----------KGPDPLVNFDTIFVGGLVKA----GKSLDAAKYVERVMNRGVEV 405
+G R + +G + D I G + A GKSL+A K + + + G+++
Sbjct: 883 IGNRFKMISLFKDMEARG----IACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKL 938
Query: 406 PRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLA 442
++ + + E+ + E+ L E+G +L+
Sbjct: 939 EDDVFDALIFHLCKEKQISTVLEL---LSEMGKEELS 972
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 88/401 (21%), Positives = 156/401 (38%), Gaps = 76/401 (18%)
Query: 48 NFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETL--QEMGRRRL 105
+FP W V + F + P F H T R +I K ++ W+ L E R+L
Sbjct: 30 SFPQIWNNVSIHFMFFSTNNP-FDHYDDTV-REFSMILKRKD----WQILLNNEDNVRKL 83
Query: 106 VNDKTFKIALMTLAEVRELKKMVNFFHIMND-CGCEYSLEMLNKVVKTLCQRKLVVEAKY 164
+ +++ +E+ + ++ NFF+ + L + + LC L+ +A
Sbjct: 84 --NPEIVCSVLQKSEIDDSVRLQNFFYWSSSKMSTPQYLHSYSILAIRLCNSGLIHQADN 141
Query: 165 LILKLSEWIKP------------------NEIAYGWLIKGYCDVGDLIEASKIWNLMTDE 206
++ KL + KP N + I + +G L EAS ++ E
Sbjct: 142 MLEKLLQTRKPPLEILDSLVRCYREFGGSNLTVFDIFIDKFRVLGFLNEASSVFIASISE 201
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLSTYRIVIDWMCKRGKIS 265
GF P++ + ++ K N KV+ M+ K + D+ TY VI CK G +
Sbjct: 202 GFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDV--YTYTNVIKAHCKVGDVI 259
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISLYHGLIKGLL 325
+ +L EM K KP++ Y+ I GL
Sbjct: 260 KGKMVLSEMEKEC--------------------------------KPNLFTYNAFIGGLC 287
Query: 326 RLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK------------GPDPLVN 373
+ EA +V + M+++G P HTY +L+ G ++ K G +P
Sbjct: 288 QTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRF 347
Query: 374 FDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
T + G +K G +A + + ++ RG+++ YN +
Sbjct: 348 TYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMI 388
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 104/228 (45%), Gaps = 21/228 (9%)
Query: 179 AYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
A+ LI +C G +IEA ++++ M D+ P+I +I+ + K +EA ++F M
Sbjct: 802 AFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDM 861
Query: 239 RVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR 298
+ + L+ +++ + + G + ++ ++M RGI D +I YG++A
Sbjct: 862 ETRNIIPNTLTYTSLLLSYN-QIGNRFKMISLFKDMEARGIACD-----AIAYGVMASAY 915
Query: 299 LREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+E K +E ++ + SL G+ + VF +I C+ + ++ L
Sbjct: 916 CKEG-KSLEALKLLNKSLVEGI----------KLEDDVFDALIFHLCKEKQISTVLELLS 964
Query: 359 HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
+GK N T+ + G K+G +A+K V VM R VP
Sbjct: 965 EMGKEELSLSSKTCN--TLLL-GFYKSGNEDEASK-VLGVMQRLGWVP 1008
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 89/221 (40%), Gaps = 40/221 (18%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
N +T+ ++D GK+ ++ + +M R ++ N T+ L++ ++ KM++ F
Sbjct: 834 NIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLF 893
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVG 191
M G I + IAYG + YC G
Sbjct: 894 KDMEARG----------------------------------IACDAIAYGVMASAYCKEG 919
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS-- 249
+EA K+ N EG + DV D +I F + K+ + V +++ ++L LS
Sbjct: 920 KSLEALKLLNKSLVEGIKLEDDVFDALI---FHLCKEKQISTVLELLSEMGKEELSLSSK 976
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
T ++ K G +A +L M + G +L+L+ I
Sbjct: 977 TCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLTDSI 1017
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 165/351 (47%), Gaps = 28/351 (7%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T+ + +VR+L+ M + GC ++ N ++ LC+ + EA ++
Sbjct: 245 TYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEM 304
Query: 170 SEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++ + P+ YG +I G C G +A + + M+ G P++ V +I+ F +
Sbjct: 305 EDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNA 364
Query: 229 DEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNL 284
DEA K+ VK M G+ TY +I +CK G++ +A +L++M K G AD +
Sbjct: 365 DEAFKI-----VKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTM 419
Query: 285 TLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREM 340
T + +I G L + EA+ ++ E+ K P++ Y +I GL ++ + A+ + +M
Sbjct: 420 TYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQM 479
Query: 341 IKRGCEPTMHTYIMLLQGH------------LGKRGRKGPDP-LVNFDTIFVGGLVKAGK 387
I G +P Y L+ G+ L K R+ P L ++++ +G L GK
Sbjct: 480 IADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIG-LSNVGK 538
Query: 388 SLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
+A +Y + ++ +G + F Y +H YS + E++ ++ GL
Sbjct: 539 MDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGL 589
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 164/357 (45%), Gaps = 30/357 (8%)
Query: 98 QEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRK 157
+ GRR +V D + + T + ++ +M D G SL N ++K L +
Sbjct: 167 SDQGRRPVVLD----VLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRAD 222
Query: 158 LVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVD 216
+ K I P+ Y LI+ YC V DL A K+ M + G ++ +
Sbjct: 223 ALDLLWKVRGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYN 282
Query: 217 KMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLE 272
+I + +EA K M+D GL TY +I+ +CKRG+ QA +L+
Sbjct: 283 TLIGGLCRAGAIEEAFGY-----KKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLD 337
Query: 273 EMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLR 328
EM G+ + + S++I G + +G EA+K+V+E+ +P+ Y LI+GL +L
Sbjct: 338 EMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLG 397
Query: 329 RAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK------------GPDPLVNFDT 376
R A+++ ++M K G TY ++++GHL + ++ G P V +
Sbjct: 398 RMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYS 457
Query: 377 IFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKL 433
I + GL + G+S A+ +E+++ G++ F Y + Y E + E KK+
Sbjct: 458 IIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKM 514
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 141/354 (39%), Gaps = 65/354 (18%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFF 131
N+ + ++ + + L ETL++M R L D + ++ L+ V ++ + +
Sbjct: 487 NAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAI--- 543
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVG 191
EY EML K +PN+ YG LI GY G
Sbjct: 544 --------EYYDEMLEK-----------------------GFQPNDFTYGGLIHGYSMAG 572
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR-MDDLGLST 250
+L +A ++ + M + G P+ + +++E +FK + ++ + M K M D L
Sbjct: 573 NLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRL-- 630
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y IVI + G + A ++L + K G+ D+L S+I G + +A +++E+
Sbjct: 631 YGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMA 690
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK 366
K P IS Y+ LI G + A +F +I +G P TY L+ G+
Sbjct: 691 KKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGY------- 743
Query: 367 GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE 420
KAG DA ++ GV F Y+ SN
Sbjct: 744 ----------------CKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNS 781
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 127/295 (43%), Gaps = 23/295 (7%)
Query: 78 NRMVDII----GKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVNFFH 132
NR+ I+ S ++ L + + LV D +L++ + +++K V
Sbjct: 628 NRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLD 687
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVG 191
M G E + N ++ C+ + A+ + + + + PN + Y LI GYC G
Sbjct: 688 EMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAG 747
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTY 251
D+ +A ++N M EG P V + +A+ + + M + + S++
Sbjct: 748 DIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAII--SSF 805
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK 311
++ CKRGK+ + L M + I LT+ +I+ GL G+L EA+ + E+++
Sbjct: 806 NTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIFVELQQ 865
Query: 312 PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP--TMHTYIM--LLQGHLGK 362
+ S H R + +F +MI +G P +H I QG+L K
Sbjct: 866 KNAS--H---------RDTDHLSSLFTDMINQGLVPLDVIHNMIQSHCKQGYLDK 909
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 149/300 (49%), Gaps = 12/300 (4%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N + +N ++D + K + ++ ++ EM R + D T+ + + +L +
Sbjct: 149 NVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLL 208
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDV 190
M + + N ++ LC+ V EAK L+ ++ E IKP + Y L+ GYC V
Sbjct: 209 DEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLV 268
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM--DDLGL 248
G++ A +I++ M G P++ + MI K + DEAM + + M K M D +
Sbjct: 269 GEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTV-- 326
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA----YK 304
TY +ID +CK G+I+ A ++ EM RG AD +T +S++ L L +A K
Sbjct: 327 -TYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMK 385
Query: 305 VVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
+ E +P + Y LI GL + R + A ++F+ ++ +GC + TY +++ G L K G
Sbjct: 386 MKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISG-LCKEG 444
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 150/325 (46%), Gaps = 48/325 (14%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
++ L L ++ E + V ++ D ++ M N ++ LC+ KLV EA L ++
Sbjct: 117 SYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEM 176
Query: 170 -SEWIKPNEIAYGWLIKGYCDVGDLI---------------------------------- 194
+ I P+ I Y LI G+C +G L+
Sbjct: 177 DARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNV 236
Query: 195 -EASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
EA + +MT EG +P + +++ + + + A ++F M V+ + + +Y I
Sbjct: 237 KEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAM-VQMGVNPNVYSYNI 295
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI---- 309
+I+ +CK ++ +A +L EM + + D +T +S+I GL GR+ A ++ E+
Sbjct: 296 MINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRG 355
Query: 310 EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPD 369
+ D+ Y L+ L + + +AT +F +M +RG +PTM+TY L+ G L K GR
Sbjct: 356 QPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDG-LCKGGR---- 410
Query: 370 PLVNFDTIFVGGLVKAGKSLDAAKY 394
L N +F LVK G +D Y
Sbjct: 411 -LKNAQELFQHLLVK-GCCIDVWTY 433
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 142/323 (43%), Gaps = 22/323 (6%)
Query: 111 FKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLC---QRKLVVEAKYLIL 167
F L +LA++++ ++ M G + LN ++ C Q IL
Sbjct: 13 FNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSVLGKIL 72
Query: 168 KLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINK 227
KL +P+ I L+KG C G++ ++ + + +GF+ ++ KI +
Sbjct: 73 KLG--YQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGE 130
Query: 228 DDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLS 287
A+K+ +M+ R + Y +ID +CK +++AY + EM RGI D +T +
Sbjct: 131 TRCAVKLLRMIE-DRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYT 189
Query: 288 SIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
++IYG G+L A+ +++E+ P + +Y+ LI L + +EA + M K
Sbjct: 190 TLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKE 249
Query: 344 GCEPTMHTYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDA 391
G +P + TY L+ G+ + G +P V I + GL K + +A
Sbjct: 250 GIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEA 309
Query: 392 AKYVERVMNRGVEVPRFDYNKFL 414
+ ++++ + YN +
Sbjct: 310 MNLLREMLHKNMVPDTVTYNSLI 332
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 143/313 (45%), Gaps = 24/313 (7%)
Query: 146 LNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
LN ++K LC + V ++ + K+ ++ + + ++YG L+ G C +G+ A K+ ++
Sbjct: 83 LNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIE 142
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
D P++ + + +I+ K +EA ++ M + + + TY +I C G++
Sbjct: 143 DRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAI-TYTTLIYGFCLLGQL 201
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV----EEIEKPDISLYHGL 320
A+++L+EM + I + +I L G ++EA ++ +E KP + Y L
Sbjct: 202 MGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTL 261
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNF------ 374
+ G + + A Q+F M++ G P +++Y +++ G L K R D +N
Sbjct: 262 MDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMING-LCKCKR--VDEAMNLLREMLH 318
Query: 375 -----DTI----FVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVM 425
DT+ + GL K+G+ A + + +RG Y L + +
Sbjct: 319 KNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDK 378
Query: 426 FEEVGKKLREVGL 438
+ K++E G+
Sbjct: 379 ATALFMKMKERGI 391
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 123/277 (44%), Gaps = 13/277 (4%)
Query: 77 FNRMVDIIGKSRNI----DLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
+N +++ + K N+ +L +E + +V T + EV+ K++ FH
Sbjct: 223 YNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQI---FH 279
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVG 191
M G ++ N ++ LC+ K V EA L+ + L + + P+ + Y LI G C G
Sbjct: 280 AMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSG 339
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTY 251
+ A + N M G + +++ K D+A +F M+ +R + TY
Sbjct: 340 RITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMK-ERGIQPTMYTY 398
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK 311
+ID +CK G++ A + + + +G D T + +I GL G EA + ++E
Sbjct: 399 TALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMED 458
Query: 312 ----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
P+ + +I+ L +A ++ EMI +G
Sbjct: 459 NGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKG 495
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/288 (19%), Positives = 119/288 (41%), Gaps = 53/288 (18%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
NK++ +L + K + A L ++ + I+ N + LI +C +G + + + +
Sbjct: 14 NKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSVLGKILK 73
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKIS 265
G++P D + L+T ++ +C +G++
Sbjct: 74 LGYQP---------------------------------DTITLNT---LMKGLCLKGEVK 97
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLI 321
++ +++ +G + D+++ +++ GL G R A K++ IE +P++ +Y+ +I
Sbjct: 98 KSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTII 157
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------------LGKRGRKGPD 369
GL + + EA ++ EM RG P TY L+ G L + K +
Sbjct: 158 DGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNIN 217
Query: 370 PLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
P V I + L K G +A + + G++ Y+ + Y
Sbjct: 218 PGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGY 265
>gi|297839365|ref|XP_002887564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297333405|gb|EFH63823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 451
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 172/392 (43%), Gaps = 22/392 (5%)
Query: 16 YQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSI 75
+ Q + L + + NL + ++ N+ P + + FF + + H++
Sbjct: 35 FHQTLDDQFILSTKTTPWTPNLVNSVLKRLWNHGPKALQ----FFHFLDNHHREYVHDAS 90
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIM 134
+F+ +DI + W + M R+ + KTF I A + K V F M
Sbjct: 91 SFDLAIDIAARLHIHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASSGKPDKAVKLFLNM 150
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLI 194
++ GC L N ++ LC+ K V +A L L + + Y ++ G+C +
Sbjct: 151 HEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSADTVTYNVIVNGWCLIKRTP 210
Query: 195 EASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIV 254
+A ++ M D G P++ + M++ FF+ + +A + F M+ KR ++ + TY V
Sbjct: 211 KALEVLKEMVDRGINPNLTTYNTMLQGFFRAGQIRQAWEFFLEMK-KRNCEIDVVTYTTV 269
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK--- 311
+ G+I + + +EM + G+ T ++ I L + + A + EE+ +
Sbjct: 270 VHGFGVAGEIKRTRNVFDEMIREGVLPSVATYNAFIQVLCKKDSVENAVVMFEEMVRKGY 329
Query: 312 -PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH---------LG 361
P+++ Y+ LI+GL + ++ + M GCEP TY M+++ + LG
Sbjct: 330 EPNVTTYNVLIRGLFHAGKFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALG 389
Query: 362 KRGRKGP-DPLVNFDT--IFVGGLVKAGKSLD 390
+ G D L N DT I + G+ +S D
Sbjct: 390 LFEKMGTGDCLPNLDTYNILISGMFVRKRSED 421
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 110/245 (44%), Gaps = 36/245 (14%)
Query: 199 IWNL---MTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVI 255
+W+L M PS + E + K D+A+K+F M L+++ ++
Sbjct: 108 VWSLIHRMRSLRIGPSPKTFAIVAERYASSGKPDKAVKLFLNMHEHGCFQ-DLASFNTIL 166
Query: 256 DWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----K 311
D +CK ++ +AY + + R AD +T + I+ G R +A +V++E+
Sbjct: 167 DVLCKSKRVEKAYELFRALRGR-FSADTVTYNVIVNGWCLIKRTPKALEVLKEMVDRGIN 225
Query: 312 PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPL 371
P+++ Y+ +++G R + R+A + F EM KR CE + TY ++ G
Sbjct: 226 PNLTTYNTMLQGFFRAGQIRQAWEFFLEMKKRNCEIDVVTYTTVVHG------------- 272
Query: 372 VNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY----SNEEGVVMFE 427
V G +K +++ + ++ GV YN F+ S E VVMFE
Sbjct: 273 -----FGVAGEIKRTRNV-----FDEMIREGVLPSVATYNAFIQVLCKKDSVENAVVMFE 322
Query: 428 EVGKK 432
E+ +K
Sbjct: 323 EMVRK 327
>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 907
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 147/300 (49%), Gaps = 7/300 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
N +N ++D + K RN D MG+ L ND T+ I + +L ++F
Sbjct: 366 NIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFL 425
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
M D G + S+ N ++ C+ + A+ L+ ++ ++ ++P + Y L+ GYC
Sbjct: 426 GEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSK 485
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G + +A ++++ MT +G PSI ++ F+ +A+K+F M + T
Sbjct: 486 GKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKP-NRVT 544
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y ++I+ C+ G +S+A+ L EM ++GI D + +I+GL G+ EA V+ +
Sbjct: 545 YNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLH 604
Query: 311 KPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK 366
K + L Y GL+ G R + EA V ++M RG + + Y +L+ G L + RK
Sbjct: 605 KGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRK 664
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 148/326 (45%), Gaps = 28/326 (8%)
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKP 175
+L E+++L + M GC+ ++ N ++ LC+++ V EA + L+ + +KP
Sbjct: 236 SLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKP 295
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
+ + Y L+ G C V + ++ + M F PS V ++E K K +EA+ +
Sbjct: 296 DVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNL- 354
Query: 236 QMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
VKR+ + G+S Y +ID +CK +A + + M K G+ +++T S +I
Sbjct: 355 ----VKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILID 410
Query: 292 GLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
RG+L A + E+ KP + Y+ LI G + A + EMI + EP
Sbjct: 411 MFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEP 470
Query: 348 TMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKY 394
T+ TY L+ G+ K G+ KG P + T + GL +AG DA K
Sbjct: 471 TVVTYTSLMGGYCSK-GKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKL 529
Query: 395 VERVMNRGVEVPRFDYNKFLHYYSNE 420
+ V+ R YN + Y E
Sbjct: 530 FTEMAEWNVKPNRVTYNVMIEGYCEE 555
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 146/346 (42%), Gaps = 57/346 (16%)
Query: 123 ELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYG 181
++ K + +H M G S+ ++ L + L+ +A L +++EW +KPN + Y
Sbjct: 487 KINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYN 546
Query: 182 WLIKGYCDVGDLIEASKIWNLMTDEGFEPS-----------------------IDVVDK- 217
+I+GYC+ G++ +A + N M ++G P +D + K
Sbjct: 547 VMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKG 606
Query: 218 -----------MIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQ 266
++ F + K +EA+ V Q M ++ +D L L Y ++ID K
Sbjct: 607 NCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVD-LDLVCYGVLIDGSLKHKDRKV 665
Query: 267 AYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV----VEEIEKPDISLYHGLIK 322
+L+EM RG++ D++ +S+I G +EA+ + + E P+ Y +I
Sbjct: 666 FLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVIN 725
Query: 323 GLLRLRRAREATQVFREMIKRGCEPTMHTY---IMLLQGHLGKRGR---------KGPDP 370
GL + EA + +M P TY + +L +G + KG
Sbjct: 726 GLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKG--L 783
Query: 371 LVNFDT--IFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
L N T + + G + G+ +A++ + R++ GV Y +
Sbjct: 784 LANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMI 829
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 115/264 (43%), Gaps = 17/264 (6%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
I+P+ Y +I+ C++ DL A ++ M G + +I + +I+ K K EA+
Sbjct: 223 IRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAV 282
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
+ + + K + + TY ++ +CK + M++EM + +SS++ G
Sbjct: 283 GIKKDLAGKELKP-DVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEG 341
Query: 293 LLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
L RG++ EA +V+ + + P+I +Y+ LI L + R EA +F M K G P
Sbjct: 342 LRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPN 401
Query: 349 MHTYIMLLQ------------GHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVE 396
TY +L+ LG+ G P V + G K G A +
Sbjct: 402 DVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMA 461
Query: 397 RVMNRGVEVPRFDYNKFLHYYSNE 420
++N+ +E Y + Y ++
Sbjct: 462 EMINKKLEPTVVTYTSLMGGYCSK 485
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 144/368 (39%), Gaps = 81/368 (22%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND----KTFKIALMT 117
+T+ A+ N +T+N M++ + N+ +E L EM + +V D + L
Sbjct: 530 FTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCL 589
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA--------------- 162
+ E K V+ H N CE + ++ C+ + EA
Sbjct: 590 TGQASEAKVFVDGLHKGN---CELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLD 646
Query: 163 -----------------KYLILKLSEW----IKPNEIAYGWLIKGYCDVGDLIEASKIWN 201
K + L E +KP+++ Y +I GD EA IW+
Sbjct: 647 LVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWD 706
Query: 202 LMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR------------------VKRM 243
LM +EG P+ +I K +EA + MR K +
Sbjct: 707 LMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGV 766
Query: 244 DDL------------GL----STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLS 287
D+ GL +TY ++I C++G++ +A ++ M G+ D +T +
Sbjct: 767 GDMKKAVELHNAILKGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYT 826
Query: 288 SIIYGLLARGRLREAYKV----VEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
++I L R +++A ++ E+ +PD Y+ LI G +AT++ EM+++
Sbjct: 827 TMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQ 886
Query: 344 GCEPTMHT 351
G +P T
Sbjct: 887 GLKPNTET 894
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 69/154 (44%), Gaps = 10/154 (6%)
Query: 73 NSITFNRMVDIIGKS-----RNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKM 127
N +T+ +DI+ K + ++L L+ + L N T+ + + +++
Sbjct: 751 NQVTYGCFLDILTKGVGDMKKAVELHNAILKGL----LANTATYNMLIRGFCRQGRMEEA 806
Query: 128 VNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKG 186
M G ++ LC+R V +A L ++E I+P+ +AY LI G
Sbjct: 807 SELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHG 866
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIE 220
C G++ +A+++ N M +G +P+ + + I
Sbjct: 867 CCVAGEMGKATELRNEMLRQGLKPNTETSETTIS 900
>gi|308082018|ref|NP_001183846.1| uncharacterized protein LOC100502439 [Zea mays]
gi|238014984|gb|ACR38527.1| unknown [Zea mays]
gi|414872746|tpg|DAA51303.1| TPA: hypothetical protein ZEAMMB73_971718 [Zea mays]
Length = 623
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/427 (23%), Positives = 188/427 (44%), Gaps = 22/427 (5%)
Query: 11 VCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCF 70
V IL + SPE+ + ++ C ++ ++ + F W + FF + Q +
Sbjct: 136 VSRILRSRFASPEA-IVITMDCCPVRVSARLVSKVLSRFSNDWVAAFGFFMWA-GTQEGY 193
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGR-RRLVNDKTFKIALMTLAEVRELKKMVN 129
H + +++ MVDI+GK + DL + +M LV+ T + L ++
Sbjct: 194 CHCADSYDMMVDILGKFKQFDLMCGLIGQMHEIGGLVSLATMTKVMRRLCGANRWSDAID 253
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCD 189
FH M+ G + +N ++ TLC+ + V A+ L I P+E ++ L+ G+C
Sbjct: 254 AFHKMDRFGVAKDTKAMNVLLDTLCKERSVKRARGAFQALKGTIPPDESSFNTLVHGWCK 313
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK-VFQMMRVKRMDDLGL 248
L EA + M GF PS+ +IE + + KD + + + M K +
Sbjct: 314 ARMLKEARETMKEMERHGFSPSVTTYTCLIEAYC-MEKDFQTVDGILDEMHTKGCTP-NI 371
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY IV+ + K G+ +A +++ + G D + +IY L GRL++A VVEE
Sbjct: 372 ITYTIVMHALGKAGRTQEALDTFDKVKQDGCALDASFYNCLIYILCRAGRLQDANFVVEE 431
Query: 309 IEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
+ + P+++ ++ LI A A ++ +M ++ C P + TY LL+ ++
Sbjct: 432 MHRTGISPNLTTFNTLISAACDHSLAENALKLLVQMEEQSCNPDIKTYTPLLKLCCRRKW 491
Query: 365 ------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNK 412
RK P + T+ V L + G+ + ++E ++ +G + ++
Sbjct: 492 VKTLLFLICHMFRKDITPDFSTYTLLVCWLCRNGRLTQSCLFLEEMVLKGFTPQQATFDL 551
Query: 413 FLHYYSN 419
L N
Sbjct: 552 VLEKLKN 558
>gi|297719649|ref|NP_001172186.1| Os01g0151900 [Oryza sativa Japonica Group]
gi|9663979|dbj|BAB03620.1| hypothetical protein [Oryza sativa Japonica Group]
gi|13872936|dbj|BAB44041.1| hypothetical protein [Oryza sativa Japonica Group]
gi|215768885|dbj|BAH01114.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255672883|dbj|BAH90916.1| Os01g0151900 [Oryza sativa Japonica Group]
Length = 534
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/413 (22%), Positives = 189/413 (45%), Gaps = 20/413 (4%)
Query: 7 HLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKA 66
H+ + IL + +S L L+ + + L++ +W+ FF++
Sbjct: 82 HVSEIVKIL--KSRDGDSELAEVLNQFADEMDEDVVLKVLQKQRSNWKVALSFFKWAA-G 138
Query: 67 QPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEM---GRRRLVNDKTFKIALMTLAEVRE 123
P + H S + M+DI+G+ + + L + E+ R+ +V ++ F + L A +
Sbjct: 139 LPQYNHGSRAYTEMLDILGRMKKVRLMRQLFDEIPVESRQSVVTNRMFAVLLNRYAGAHK 198
Query: 124 LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWL 183
+++ ++ F+ D G E L ++ +LC+ K V EA+ L L+ + P ++ +
Sbjct: 199 VQEAIDMFYKRKDYGFELDLVGFQILLMSLCRYKHVEEAEALFLQKKDEFPPVIKSWNII 258
Query: 184 IKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM 243
+ G+C G L +A ++WN + +P + I + K K A+K+F M K +
Sbjct: 259 LNGWCVKGSLADAKRVWNEIIASKLKPDLFTYGTFINSLTKSGKLSTAVKLFTSMWEKGI 318
Query: 244 DDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
+ ++ +ID +C + +I +A + EM RG +AD T +++I R+ + Y
Sbjct: 319 NP-DVAICNCIIDQLCFKKRIPEALEIFGEMNDRGCQADVATYNTLIKHFCKINRMEKVY 377
Query: 304 KVVEEIEKPDISLYHGLIKGLLR-LRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG- 361
++++++E +S + +L+ + ++ + + M K GC TY ++L ++
Sbjct: 378 ELLDDMEVKGVSPNNMTYSYILKTTEKPKDVISLMQRMEKSGCRLDSDTYNLILNLYVSW 437
Query: 362 --KRG---------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
++G R G P TI V GL K +A Y + +RG+
Sbjct: 438 DYEKGVQLVWDEMERNGSGPDQRSFTIMVHGLHSHDKLDEALHYYRTMESRGM 490
>gi|125569053|gb|EAZ10568.1| hypothetical protein OsJ_00400 [Oryza sativa Japonica Group]
Length = 514
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/413 (22%), Positives = 189/413 (45%), Gaps = 20/413 (4%)
Query: 7 HLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKA 66
H+ + IL + +S L L+ + + L++ +W+ FF++
Sbjct: 62 HVSEIVKIL--KSRDGDSELAEVLNQFADEMDEDVVLKVLQKQRSNWKVALSFFKWAA-G 118
Query: 67 QPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEM---GRRRLVNDKTFKIALMTLAEVRE 123
P + H S + M+DI+G+ + + L + E+ R+ +V ++ F + L A +
Sbjct: 119 LPQYNHGSRAYTEMLDILGRMKKVRLMRQLFDEIPVESRQSVVTNRMFAVLLNRYAGAHK 178
Query: 124 LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWL 183
+++ ++ F+ D G E L ++ +LC+ K V EA+ L L+ + P ++ +
Sbjct: 179 VQEAIDMFYKRKDYGFELDLVGFQILLMSLCRYKHVEEAEALFLQKKDEFPPVIKSWNII 238
Query: 184 IKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM 243
+ G+C G L +A ++WN + +P + I + K K A+K+F M K +
Sbjct: 239 LNGWCVKGSLADAKRVWNEIIASKLKPDLFTYGTFINSLTKSGKLSTAVKLFTSMWEKGI 298
Query: 244 DDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
+ ++ +ID +C + +I +A + EM RG +AD T +++I R+ + Y
Sbjct: 299 NP-DVAICNCIIDQLCFKKRIPEALEIFGEMNDRGCQADVATYNTLIKHFCKINRMEKVY 357
Query: 304 KVVEEIEKPDISLYHGLIKGLLR-LRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG- 361
++++++E +S + +L+ + ++ + + M K GC TY ++L ++
Sbjct: 358 ELLDDMEVKGVSPNNMTYSYILKTTEKPKDVISLMQRMEKSGCRLDSDTYNLILNLYVSW 417
Query: 362 --KRG---------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
++G R G P TI V GL K +A Y + +RG+
Sbjct: 418 DYEKGVQLVWDEMERNGSGPDQRSFTIMVHGLHSHDKLDEALHYYRTMESRGM 470
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 171/369 (46%), Gaps = 26/369 (7%)
Query: 76 TFNRMVDII---GKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
TFN M++++ GK + F ++ +G + N T+ + + ++ F
Sbjct: 218 TFNIMINVLCKEGKLKKAKEFIGHMETLGVKP--NVVTYNTIIHGHCLRGKFQRARVIFQ 275
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVG 191
M D G E N + LC+ + EA LI K+ E + PN + Y LI GYC+ G
Sbjct: 276 TMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKG 335
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTY 251
DL +A + M +G S+ + I F + +A + + MR K M + T+
Sbjct: 336 DLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAV-TH 394
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK 311
I+I+ C+ G +A+ +L+EM +GI+ +T +S+IY L R R++EA + +I++
Sbjct: 395 NILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQ 454
Query: 312 ----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH-------- 359
PDI +++ LI G A Q+ +EM P TY L+QG+
Sbjct: 455 EGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEE 514
Query: 360 ----LGKRGRKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
L + R+G P ++++T+ + G K G DA + + +M G + YN +
Sbjct: 515 ARQLLDEMKRRGIKPDHISYNTL-ISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALI 573
Query: 415 H-YYSNEEG 422
N+EG
Sbjct: 574 QGLCKNQEG 582
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 132/266 (49%), Gaps = 30/266 (11%)
Query: 178 IAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-Q 236
+ + L++ YC++ EA + + L+ ++GF P+I+ ++M+ F K+N+ A ++ +
Sbjct: 147 LIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAE 206
Query: 237 MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR 296
M R+ L T+ I+I+ +CK GK+ +A + M G++ + +T ++II+G R
Sbjct: 207 MFRMNIRS--SLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLR 264
Query: 297 GRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
G+ + A + + ++ +PD Y+ I GL + R EA+ + +M++ G P TY
Sbjct: 265 GKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTY 324
Query: 353 IMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNK 412
L+ G+ K G L K A Y + ++++G+ YN
Sbjct: 325 NALIDGYCNK-----------------GDLDK------AYAYRDEMISKGIMASLVTYNL 361
Query: 413 FLHYYSNEEGVVMFEEVGKKLREVGL 438
F+H E + + + K++RE G+
Sbjct: 362 FIHALFMEGRMGDADNMIKEMREKGM 387
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 123/260 (47%), Gaps = 39/260 (15%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEA 196
G SL N + L + +A +I ++ E + P+ + + LI GYC GD A
Sbjct: 351 GIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRA 410
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR----------------- 239
+ + M +G +P++ +I K N+ EA +F ++
Sbjct: 411 FGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDG 470
Query: 240 -------------VKRMDDLGL----STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEAD 282
+K MD++ + TY ++ C+ GK+ +A +L+EM +RGI+ D
Sbjct: 471 HCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPD 530
Query: 283 NLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFR 338
+++ +++I G RG +++A++V +E+ P I Y+ LI+GL + + A ++ +
Sbjct: 531 HISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLK 590
Query: 339 EMIKRGCEPTMHTYIMLLQG 358
EM+ +G P TY+ +++
Sbjct: 591 EMVSKGITPDDSTYLSIIEA 610
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 147/289 (50%), Gaps = 23/289 (7%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYC-DVGDLIEASKIWNLMTD 205
N +V LC+ V EA+ LI+ + PN I Y LI G C ++ + EA K++ +
Sbjct: 119 NSLVNGLCKNGRVDEARMLIV--DKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLK 176
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKIS 265
+G+EP + + +I+ K ++ +EA ++F + VK + TY + ID +CK G++
Sbjct: 177 QGYEPEVPTYNILIDGLLKEDRVNEAFELFSGL-VKHGLEPDAITYTVFIDGLCKAGRVE 235
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLI 321
A ML++M ++G D ++ +++I GL R+ EA ++ +E P+ ++ LI
Sbjct: 236 DALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLI 295
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR--GR-------------K 366
G R + ++A F+EM+KRG +PT+ TY +L+ G R GR K
Sbjct: 296 CGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEK 355
Query: 367 GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
G P V + + GL KAGK DA + + + +G + YN +
Sbjct: 356 GRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLIS 404
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 149/315 (47%), Gaps = 25/315 (7%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
PN I Y L+ G C+ G + +A ++ M G+ P + + ++ F K+ + DEA+K+
Sbjct: 8 PNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKI 67
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
F VKR + TY +I+ CK K+ +A +L+ M + D +T +S++ GL
Sbjct: 68 FDGA-VKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLC 126
Query: 295 ARGRLREA-YKVVEEIEKPDISLYHGLIKGLLR-LRRAREATQVFREMIKRGCEPTMHTY 352
GR+ EA +V++ P++ Y LI GL R LR EA ++F ++K+G EP + TY
Sbjct: 127 KNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTY 186
Query: 353 IMLLQGHLGKRG------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMN 400
+L+ G L + + G +P T+F+ GL KAG+ DA ++ +
Sbjct: 187 NILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDE 246
Query: 401 RGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLADIFQ----------RYGK 450
+G +N ++ E+ V E + + G + A F ++ K
Sbjct: 247 KGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKK 306
Query: 451 KMATRERRRNRAIEP 465
M T + R ++P
Sbjct: 307 AMTTFKEMLKRGVKP 321
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 131/286 (45%), Gaps = 45/286 (15%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIM 134
T+N ++D + K ++ +E + + L D T+ + + L + ++ + M
Sbjct: 185 TYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDM 244
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDL 193
++ GC + N V+ LC+ K V EA+ L+ + ++ PN I++ LI G C G
Sbjct: 245 DEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKW 304
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
+A + M G +P++ TY I
Sbjct: 305 KKAMTTFKEMLKRGVKPTV------------------------------------VTYNI 328
Query: 254 VIDWMCK---RGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
++D +CK G+I +A T+ + M ++G D +T S++I GL G+L +A +++ +E
Sbjct: 329 LVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAME 388
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
P++ Y+ LI GL L + EA ++F M+++GC P TY
Sbjct: 389 AKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITY 434
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 141/303 (46%), Gaps = 26/303 (8%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLA--------EVRELKK 126
+T+N +V+ + K+ +D R L+ DK F ++T + E+R + +
Sbjct: 116 VTYNSLVNGLCKNGRVD---------EARMLIVDKGFSPNVITYSTLISGLCRELRGVSE 166
Query: 127 MVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIK 185
+ F + G E + N ++ L + V EA L L ++P+ I Y I
Sbjct: 167 ALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFID 226
Query: 186 GYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD 245
G C G + +A + M ++G P + + +I K + DEA + M K
Sbjct: 227 GLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSP 286
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL-AR--GRLREA 302
+S + +I C+ GK +A T +EM KRG++ +T + ++ GL AR GR++EA
Sbjct: 287 NAIS-FNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEA 345
Query: 303 YKVVEE-IEK---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+ + IEK PD+ Y LI GL + + +A ++ M +GC P ++TY L+ G
Sbjct: 346 ITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISG 405
Query: 359 HLG 361
G
Sbjct: 406 LCG 408
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 274 MFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRR 329
M K G + +T ++++ GL GR+ +A + E + K PD+ Y+ L+ G ++
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60
Query: 330 AREATQVFREMIKRGCEPTMHTYIMLLQG 358
EA ++F +KRG P + TY L+ G
Sbjct: 61 LDEALKIFDGAVKRGFVPDVVTYNALING 89
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 168/361 (46%), Gaps = 21/361 (5%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIM 134
TFN ++ + K+ + L+EM L D+ TF + E +L + M
Sbjct: 160 TFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQM 219
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDL 193
GC + + +V C+ V EA +L++SE P+++ + L+ G+C +G++
Sbjct: 220 LGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNV 279
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
+A I + M ++GF+P + + +I K+ + ++A+++ Q M ++ TY
Sbjct: 280 NDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSP-NTVTYNT 338
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE--- 310
+I +CK +I A + + +G+ D T +++I GL A ++ EE++
Sbjct: 339 LISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKG 398
Query: 311 -KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPD 369
KPD Y LI L RR +EA + +EM GC Y L+ G R + +
Sbjct: 399 CKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAE 458
Query: 370 PL-------------VNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHY 416
+ V ++T+ + GL K + +A++ +++++ G++ +F YN L Y
Sbjct: 459 EIFDQMELLGVSRSSVTYNTL-IDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTY 517
Query: 417 Y 417
+
Sbjct: 518 F 518
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 135/281 (48%), Gaps = 25/281 (8%)
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
PN + Y LI C ++ A+ + ++ +G P + + +I+ D AM+
Sbjct: 330 SPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAME 389
Query: 234 VFQMMRVK--RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
+F+ M+ K + D+ TY I+ID +C ++ +A +L+EM G + + +++I
Sbjct: 390 MFEEMKNKGCKPDEF---TYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLID 446
Query: 292 GLLARGRLREAYKVVEEIEKPDIS----LYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
GL R+ +A ++ +++E +S Y+ LI GL + +R EA+Q+ +MI G +P
Sbjct: 447 GLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKP 506
Query: 348 TMHTYIMLLQ-----GHLGKRG-------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYV 395
TY LL G + K G G +P + +GGL +AG+ A+K +
Sbjct: 507 DKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLL 566
Query: 396 ERVMNRGVEVPRFDYNKFLHYY----SNEEGVVMFEEVGKK 432
V +G+ + YN + +EG+ +F E+ +K
Sbjct: 567 RSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEK 607
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 170/396 (42%), Gaps = 58/396 (14%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQ-EMGRRRLVNDKTFKIALMTLAEVRELKKMVNFF 131
N+ TF ++ I+ + L+ E+G + N + IAL L E +LK +
Sbjct: 89 NATTFATLIQSFTNFHEIENLLKILENELGFKPDTN--FYNIALNALVEDNKLKLVEMLH 146
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDV 190
M + G + N ++K LC+ + A ++ +++ +KP+EI + L++G+ +
Sbjct: 147 SKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEE 206
Query: 191 GDLIEASKIWNLM-----------------------------------TDEGFEPSIDVV 215
GDL A K+ M ++EGF P
Sbjct: 207 GDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTF 266
Query: 216 DKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMF 275
+ ++ F +I ++A+ + M +++ D + TY +I MCK G+ +A +L++M
Sbjct: 267 NSLVNGFCRIGNVNDALDIVDFM-IEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMI 325
Query: 276 KRGIEADNLTLSSIIYGLLARGRLREAYK----VVEEIEKPDISLYHGLIKGLLRLRRAR 331
R + +T +++I L + A +V + PD+ ++ LI+GL +
Sbjct: 326 LRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQD 385
Query: 332 EATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPL-------------VNFDTIF 378
A ++F EM +GC+P TY +L+ +R K L V ++T+
Sbjct: 386 IAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTL- 444
Query: 379 VGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
+ GL K+ + DA + +++ GV YN +
Sbjct: 445 IDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLI 480
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 125/294 (42%), Gaps = 43/294 (14%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIM 134
TFN ++ + S+N D+ E +EM + D+ T+ I + +L R LK+ + M
Sbjct: 370 TFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEM 429
Query: 135 NDCGCEYS--------------------------LEML---------NKVVKTLCQRKLV 159
GC + +E+L N ++ LC+ K V
Sbjct: 430 ESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRV 489
Query: 160 VEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKM 218
EA L+ ++ E +KP++ Y L+ +C VGD+ +A I M G EP I +
Sbjct: 490 EEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTL 549
Query: 219 IETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRG 278
I + + D A K+ + +++K + L Y VI + R + + + EM ++
Sbjct: 550 IGGLCRAGRVDVASKLLRSVQMKGI-VLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKS 608
Query: 279 IEADNLTLSSIIYGLL-ARGRLREAYK-VVEEIEK---PDISLYHGLIKGLLRL 327
D LT + GL G ++EA VE +EK P+ + L +GL L
Sbjct: 609 DPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGLCSL 662
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 125/283 (44%), Gaps = 25/283 (8%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
PN + LI+ + + ++ KI L + GF+P + + + + NK +K+
Sbjct: 88 PNATTFATLIQSFTNFHEIENLLKI--LENELGFKPDTNFYNIALNALVEDNK----LKL 141
Query: 235 FQMMRVKRMDD---LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
+M+ K +++ L +ST+ ++I +CK ++ A MLEEM G++ D +T ++++
Sbjct: 142 VEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQ 201
Query: 292 GLLARGRLREAYKVVEEIEKPDISLYH----GLIKGLLRLRRAREATQVFREMIKRGCEP 347
G + G L A K+ +++ L + L+ G + R EA + E+ + G P
Sbjct: 202 GFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSP 261
Query: 348 TMHTYIMLLQG--HLGKRG----------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYV 395
T+ L+ G +G KG DP V + G+ K G+ A + +
Sbjct: 262 DQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEIL 321
Query: 396 ERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
++++ R YN + E + ++ + L GL
Sbjct: 322 QQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGL 364
>gi|449463418|ref|XP_004149431.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
gi|449499065|ref|XP_004160711.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
Length = 439
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/406 (20%), Positives = 184/406 (45%), Gaps = 19/406 (4%)
Query: 26 LHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIG 85
L ++L ++ E + F + Y FF++ K Q + H+ ++ M++ +
Sbjct: 9 LETALDQTGIRISPEIAEPVLRRFENAGMLAYRFFEWASK-QRNYVHSVRAYHSMIESLA 67
Query: 86 KSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEM 145
K R + W+ + M + ++N + F I + A +++++ V F++M + ++
Sbjct: 68 KIRQYQMVWDLVNAMRNKEILNVEAFCIIMRKYARAQKVEEAVYTFNVMEKYNMKPNVAA 127
Query: 146 LNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N ++ LC+ K V +A+ + + + P+ Y LI+G+ +L +A +I+ M D
Sbjct: 128 FNGLLSALCKSKNVRKAQEIFDNMKDQFVPDSKTYSILIEGWGRAPNLPKAREIYREMID 187
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKIS 265
G P M++ K + DEA+++ + M Y +++ +I
Sbjct: 188 SGCIPDEVTYSIMVDVLCKAGRVDEAVEIVKEMDYNNCKPSSF-IYSVLVHTYGVENRIE 246
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLI 321
A + EM + G+ AD +++I +++ Y+V+++++ P+ + +I
Sbjct: 247 DAVSTFLEMERNGVMADVAAYNALISAFCKANKMKNVYRVLKDMDLKGVNPNSRTCNIII 306
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR------------GRKGPD 369
L+ EA ++FR MIK CEP + +Y M+++ G++ +K
Sbjct: 307 NSLIGRGETDEAFKIFRRMIK-VCEPDVDSYTMIIKMFCGRKELDMALKIWKYMKKKQFV 365
Query: 370 PLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
P ++ ++ + GL + G + A +E ++ +G+ + + H
Sbjct: 366 PSMHTFSVLINGLCQIGNATQACVLLEEMIEKGIRPSGATFGRLRH 411
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 112/239 (46%), Gaps = 7/239 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
+ +T++ MVD++ K+ +D E ++EM + + + T ++ V+ F
Sbjct: 193 DEVTYSIMVDVLCKAGRVDEAVEIVKEMDYNNCKPSSFIYSVLVHTYGVENRIEDAVSTF 252
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW--IKPNEIAYGWLIKGYCD 189
M G + N ++ C+ + Y +LK + + PN +I
Sbjct: 253 LEMERNGVMADVAAYNALISAFCKANKMKNV-YRVLKDMDLKGVNPNSRTCNIIINSLIG 311
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
G+ EA KI+ M + EP +D +I+ F + D A+K+++ M+ K+ +
Sbjct: 312 RGETDEAFKIFRRMI-KVCEPDVDSYTMIIKMFCGRKELDMALKIWKYMKKKQFVP-SMH 369
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
T+ ++I+ +C+ G +QA +LEEM ++GI T + + L+ GR ++ K ++E
Sbjct: 370 TFSVLINGLCQIGNATQACVLLEEMIEKGIRPSGATFGRLRHLLIKEGR-KDVLKFLQE 427
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 88/216 (40%), Gaps = 28/216 (12%)
Query: 211 SIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTM 270
S+ MIE+ KI + + MR K + L + + I++ + K+ +A
Sbjct: 55 SVRAYHSMIESLAKIRQYQMVWDLVNAMRNKEI--LNVEAFCIIMRKYARAQKVEEAVYT 112
Query: 271 LEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK---PDISLYHGLIKGLLRL 327
M K ++ + + ++ L +R+A ++ + ++ PD Y LI+G R
Sbjct: 113 FNVMEKYNMKPNVAAFNGLLSALCKSKNVRKAQEIFDNMKDQFVPDSKTYSILIEGWGRA 172
Query: 328 RRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGK 387
+A +++REMI GC P TY +I V L KAG+
Sbjct: 173 PNLPKAREIYREMIDSGCIPDEVTY-----------------------SIMVDVLCKAGR 209
Query: 388 SLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGV 423
+A + V+ + + F Y+ +H Y E +
Sbjct: 210 VDEAVEIVKEMDYNNCKPSSFIYSVLVHTYGVENRI 245
>gi|357114607|ref|XP_003559090.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Brachypodium distachyon]
Length = 486
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 194/427 (45%), Gaps = 23/427 (5%)
Query: 4 DPGHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYT 63
DP R+C ++ Q + S L L + +T + ++ + Y FF++
Sbjct: 36 DPAK--RLCKLIISCQKA--SGLELELDHSDLRVTPDVAERVLERLDNAGMLAYRFFEWA 91
Query: 64 QKAQPCFAHNSI-TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVR 122
+K + +++I +++ +V + K R L W+ + M R +VN +TF I + A +
Sbjct: 92 RKQKRGGCNHTIRSYHTVVASLAKIRQYQLMWDVVAIMRREGVVNVETFGIIMRKYARAQ 151
Query: 123 ELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGW 182
+ + V F+IM G +L N ++ LC+ K V +A+ + K++ P+ Y
Sbjct: 152 KFDEAVYTFNIMEKYGVVPNLAAFNSLLGALCKSKNVRKAQEIFDKMNGRFNPDAKTYSI 211
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
L++G+ +L + ++++ M D G +P I M+++ K + +EA+ V Q M +
Sbjct: 212 LLEGWGKAPNLPKMREVYSEMLDAGCQPDIVTYGIMVDSLCKTGRVEEAVLVVQDMSSRG 271
Query: 243 MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
Y +++ +I A +M K GI D + ++++ + A
Sbjct: 272 CQPTTF-IYSVLVHTYGVEMRIEDAVATFLDMEKDGIVPDVVVYNALVTAFCKVKKFENA 330
Query: 303 YKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
++V++++E P+ ++ ++ L+ L + EA +VFR MIKR C+P TY M+++
Sbjct: 331 FRVMDDMEGHGIAPNSRTWNIILNKLISLGKDDEAYRVFRRMIKR-CQPDSDTYTMMIKM 389
Query: 359 HLGKRG------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
K P ++ ++ + GL G+ A +E ++ +G+ P
Sbjct: 390 FCENDNVEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPP 449
Query: 407 RFDYNKF 413
+ K
Sbjct: 450 GSTFGKL 456
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 118/296 (39%), Gaps = 71/296 (23%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
N FN ++ + KS+N+ E +M R + KT+ I L + L KM +
Sbjct: 171 NLAAFNSLLGALCKSKNVRKAQEIFDKMNGRFNPDAKTYSILLEGWGKAPNLPKMREVYS 230
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS---------------------- 170
M D GC+ + +V +LC+ V EA ++ +S
Sbjct: 231 EMLDAGCQPDIVTYGIMVDSLCKTGRVEEAVLVVQDMSSRGCQPTTFIYSVLVHTYGVEM 290
Query: 171 --------------EWIKPNEIAYGWLIKGYCDVGDLIEA---------------SKIWN 201
+ I P+ + Y L+ +C V A S+ WN
Sbjct: 291 RIEDAVATFLDMEKDGIVPDVVVYNALVTAFCKVKKFENAFRVMDDMEGHGIAPNSRTWN 350
Query: 202 LM---------TDEGF----------EPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
++ DE + +P D MI+ F + + + A+KV++ MR+K+
Sbjct: 351 IILNKLISLGKDDEAYRVFRRMIKRCQPDSDTYTMMIKMFCENDNVEMALKVWKYMRLKQ 410
Query: 243 MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR 298
+ T+ ++I+ +C +G++SQA +LE+M ++GI T + LL GR
Sbjct: 411 FLP-SMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKEGR 465
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 88/217 (40%), Gaps = 28/217 (12%)
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQ 266
G +I ++ + KI + V +MR R + + T+ I++ + K +
Sbjct: 98 GCNHTIRSYHTVVASLAKIRQYQLMWDVVAIMR--REGVVNVETFGIIMRKYARAQKFDE 155
Query: 267 AYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE---KPDISLYHGLIKG 323
A M K G+ + +S++ L +R+A ++ +++ PD Y L++G
Sbjct: 156 AVYTFNIMEKYGVVPNLAAFNSLLGALCKSKNVRKAQEIFDKMNGRFNPDAKTYSILLEG 215
Query: 324 LLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLV 383
+ + +V+ EM+ GC+P + TY I V L
Sbjct: 216 WGKAPNLPKMREVYSEMLDAGCQPDIVTY-----------------------GIMVDSLC 252
Query: 384 KAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE 420
K G+ +A V+ + +RG + F Y+ +H Y E
Sbjct: 253 KTGRVEEAVLVVQDMSSRGCQPTTFIYSVLVHTYGVE 289
>gi|356515931|ref|XP_003526650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Glycine max]
Length = 461
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/420 (20%), Positives = 190/420 (45%), Gaps = 22/420 (5%)
Query: 10 RVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPC 69
RVC ++ P L ++L+ ++ + + F + P + FF++ +K Q
Sbjct: 18 RVCKVMMT---CPTLGLDTALNQTGVRVSPDLVENVLKRFENAGMPAFRFFEWAEK-QRG 73
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
++H+ ++ M++ + K R + W+ + M ++ ++N +TF I + A ++ + V
Sbjct: 74 YSHSIRAYHLMIESLAKIRQYQIVWDLVSAMRKKGMLNVETFCIMMRKYARANKVDEAVY 133
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCD 189
F++M+ +L N ++ LC+ V +A+ + + P+E +Y L++G+
Sbjct: 134 TFNVMDKYDVVPNLAAFNGLLSALCKSNNVRKAQEIFDAMKGQFVPDEKSYSILLEGWGK 193
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
+L A +++ M + G +P + M++ K + DEA++V + M V
Sbjct: 194 APNLPRAREVFREMVEAGCDPDVVTYGIMVDVLCKAGRVDEAVEVVKEMDVGNCRPTSF- 252
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
Y +++ +I A EM K+GI+AD + +++I + + ++V++E+
Sbjct: 253 IYSVLVHTYGVEHRIEDAIDTFLEMAKKGIKADVVAYNALIGAFCKVNKFKNVHRVLKEM 312
Query: 310 EK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR-- 363
E P+ + +I ++ + A +VF MIK CEP TY M+++ K
Sbjct: 313 ESNGVAPNSRTCNVIISSMIGQGQTDRAFRVFCRMIKL-CEPDADTYTMMIKMFCEKNEL 371
Query: 364 ----------GRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
K P ++ + + GL + + A +E ++ +G+ R + +
Sbjct: 372 EMALKIWKYMKSKQFVPSMHTFSALIKGLCEKDNAAKACVVMEEMIEKGIRPSRITFGRL 431
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 96/233 (41%), Gaps = 32/233 (13%)
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQ 266
G+ SI MIE+ KI + + MR K M L + T+ I++ + K+ +
Sbjct: 73 GYSHSIRAYHLMIESLAKIRQYQIVWDLVSAMRKKGM--LNVETFCIMMRKYARANKVDE 130
Query: 267 AYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK---PDISLYHGLIKG 323
A M K + + + ++ L +R+A ++ + ++ PD Y L++G
Sbjct: 131 AVYTFNVMDKYDVVPNLAAFNGLLSALCKSNNVRKAQEIFDAMKGQFVPDEKSYSILLEG 190
Query: 324 LLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLV 383
+ A +VFREM++ GC+P + TY I V L
Sbjct: 191 WGKAPNLPRAREVFREMVEAGCDPDVVTY-----------------------GIMVDVLC 227
Query: 384 KAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN----EEGVVMFEEVGKK 432
KAG+ +A + V+ + F Y+ +H Y E+ + F E+ KK
Sbjct: 228 KAGRVDEAVEVVKEMDVGNCRPTSFIYSVLVHTYGVEHRIEDAIDTFLEMAKK 280
>gi|356540343|ref|XP_003538649.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Glycine max]
Length = 543
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 177/408 (43%), Gaps = 20/408 (4%)
Query: 13 TILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAH 72
T + +++Y +L +F + Q+ N F W P FF++ K+Q + H
Sbjct: 98 TKVLKKRYPSPELAALALDGLSFQPSSGLVSQVLNRFSNDWVPALGFFKWA-KSQTGYRH 156
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGR--RRLVNDKTFKIALMTLAEVRELKKMVNF 130
+ N MVDI+GK ++ D + ++EM + + V +T + LA+ R+ + +
Sbjct: 157 SPELCNLMVDILGKCKSFDPMSDLVEEMAKLEQGYVTLETMAKVIRRLAKARKHEDAIEA 216
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDV 190
F M+ G LN ++ L + V A ++L+ I + ++ L+ G+C
Sbjct: 217 FRRMDKFGVNKDTAALNVLIDALVKGDSVEHAHKVVLEFKGLIPLSSHSFNVLMHGWCRA 276
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
A K M + GFEP + IE + + +V + MR + T
Sbjct: 277 RKFDNARKAMEDMKELGFEPDVFSYTSFIEAYCHERDFRKVDQVLEEMRENGCPPNAV-T 335
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y V+ + K G++S+A + E+M G AD S +I+ L GRL++A V E++
Sbjct: 336 YTTVMLHLGKAGQLSKALEVYEKMKCDGCVADTPVYSCMIFILGKAGRLKDACDVFEDMP 395
Query: 311 KP----DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------- 359
K D+ Y+ +I R A ++ +EM C+P + TY LL+
Sbjct: 396 KQGVVRDVVTYNTMISTACAHSREETALRLLKEMEDGSCKPNVGTYHPLLKMCCKKKRMK 455
Query: 360 -----LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
L + P + ++ V L K GK DA ++E ++ +G
Sbjct: 456 VLKFLLDHMFKNDISPDLATYSLLVNALCKTGKVADAYSFLEEMVLKG 503
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 97/225 (43%), Gaps = 4/225 (1%)
Query: 88 RNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLN 147
R +D E ++E G N T+ ++ L + +L K + + M GC + +
Sbjct: 315 RKVDQVLEEMRENGCPP--NAVTYTTVMLHLGKAGQLSKALEVYEKMKCDGCVADTPVYS 372
Query: 148 KVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDE 206
++ L + + +A + + + + + + Y +I C A ++ M D
Sbjct: 373 CMIFILGKAGRLKDACDVFEDMPKQGVVRDVVTYNTMISTACAHSREETALRLLKEMEDG 432
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQ 266
+P++ +++ K + + +K K L+TY ++++ +CK GK++
Sbjct: 433 SCKPNVGTYHPLLKMCCKKKRM-KVLKFLLDHMFKNDISPDLATYSLLVNALCKTGKVAD 491
Query: 267 AYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK 311
AY+ LEEM +G TL + L + L E +V E +++
Sbjct: 492 AYSFLEEMVLKGFTPKPSTLKGLAGELESLSMLEEKERVEEWMDR 536
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 184/387 (47%), Gaps = 30/387 (7%)
Query: 73 NSITFNRMVDIIGKSRN----IDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMV 128
N I++N +++ + K+ N + +F + Q G+ +V T+ + +L + R + + V
Sbjct: 200 NVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVV---TYNTIIDSLCKDRLVNEAV 256
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGY 187
F M D G + N ++ C + EA L ++ + P+ + + L+ G
Sbjct: 257 EFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGL 316
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C G + EA + MT++G EP+ + +++ + N+ DEA+KV +M + +
Sbjct: 317 CKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIM-IGKGCAPN 375
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
LS+Y I+I+ CK ++++A +L EM ++ + D +T S+++ GL GR REA + +
Sbjct: 376 LSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFK 435
Query: 308 EIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH---- 359
E+ PD+ Y L+ G + EA ++ +EM +R +P + Y +L++G
Sbjct: 436 EMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAG 495
Query: 360 --------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
K G P + + + GL+K G S +A ++ ++ + G YN
Sbjct: 496 KLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYN 555
Query: 412 ----KFLHYYSNEEGVVMFEE-VGKKL 433
FL + + + +E VGK+
Sbjct: 556 VIIQGFLQNQDSSTAIQLIDEMVGKRF 582
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 153/318 (48%), Gaps = 18/318 (5%)
Query: 115 LMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-I 173
L ++A+ ++ V+ + M+ G +++ LN ++ LC+ V A ++ K+ + I
Sbjct: 103 LGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGI 162
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
+P+ I + LI G C+ G + EA ++N M G EP++ + +I K A++
Sbjct: 163 QPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVR 222
Query: 234 VFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
VF+ M R + TY +ID +CK +++A L EM RGI D +T ++I++G
Sbjct: 223 VFRKMEQNR-GKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGF 281
Query: 294 LARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
+ G+L EA ++ +E+ PD ++ L+ GL + EA V M ++G EP
Sbjct: 282 CSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNA 341
Query: 350 HTYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVER 397
+TY L+ G+ LG KG P ++ I + G K+ + +A + +
Sbjct: 342 YTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSE 401
Query: 398 VMNRGVEVPRFDYNKFLH 415
+ + + Y+ +
Sbjct: 402 MSEKNLTPDTVTYSTLMQ 419
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 138/292 (47%), Gaps = 11/292 (3%)
Query: 73 NSITFNRMVDIIGKSRNID---LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
+++TFN +VD + K + ET+ E G N T+ + ++ + +
Sbjct: 305 DTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEP--NAYTYNALMDGYCLHNQMDEAIK 362
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYC 188
IM GC +L N ++ C+ K + EAK L+ ++SE + P+ + Y L++G C
Sbjct: 363 VLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLC 422
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
VG EA ++ M G P + +++ F K DEA+K+ + M +R+ +
Sbjct: 423 QVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKP-NI 481
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
Y I+I M GK+ A + ++ GI D T + +I GLL G EAY+ +
Sbjct: 482 ILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRK 541
Query: 309 IEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
+E PD Y+ +I+G L+ + + A Q+ EM+ + T+ MLL
Sbjct: 542 MEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLL 593
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 147/309 (47%), Gaps = 15/309 (4%)
Query: 61 QYTQKAQPCF--------AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TF 111
YT+KA F A ++ TFN ++ + GKS I +E +EM RR D T+
Sbjct: 802 HYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITY 861
Query: 112 KIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE 171
I + +LA+ L K ++FF+ + + ++ L + + EA L ++S+
Sbjct: 862 NIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSD 921
Query: 172 W-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDE 230
+ KPN + LI GY +GD A +++ M +EG P + +++ + DE
Sbjct: 922 YGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDE 981
Query: 231 AMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
A+ F ++ +D Y +I+ + K ++ +A + EM RGI D T +S++
Sbjct: 982 ALYYFNELKSTGLDP-DFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLM 1040
Query: 291 YGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
L G + +A ++ EE++ +PD+ Y+ LI+G A V++ M+ GC
Sbjct: 1041 LNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCN 1100
Query: 347 PTMHTYIML 355
P + TY L
Sbjct: 1101 PNIGTYAQL 1109
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 169/402 (42%), Gaps = 56/402 (13%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIM 134
T++ ++ +GK R+ ++ L+EM L N TF I + L ++ + F M
Sbjct: 229 TYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRM 288
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDL 193
+D GC L ++ LC + AK L +K+ + KP+++ Y L+ + D GDL
Sbjct: 289 DDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDL 348
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR-------------- 239
+ W+ M +G+ P + +++ K DEA F +MR
Sbjct: 349 DTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTL 408
Query: 240 ----------------VKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGI 279
+ M+ +G+ TY ID+ K G+ +A E+M +GI
Sbjct: 409 ICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGI 468
Query: 280 EADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQ 335
+ + ++ +Y L GRLREA + + + PD Y+ ++K ++ + EA
Sbjct: 469 VPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVN 528
Query: 336 VFREMIKRGCEPTMHTYIMLLQGHLGKRGR--------------KGPDPLVNFDTIFVGG 381
+ EMI+ GCEP + L+ L K GR K +V ++T+ + G
Sbjct: 529 LLSEMIRNGCEPDVIVVNSLIDS-LYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTL-LSG 586
Query: 382 LVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGV 423
L K G+ A + E ++ + +N L + + V
Sbjct: 587 LGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEV 628
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 151/351 (43%), Gaps = 52/351 (14%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTL-- 118
++Q + + +TF +VD++ K+R+ D + T M ++ ++ N T+ + L
Sbjct: 355 WSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLR 414
Query: 119 ---------------------------------AEVRELKKMVNFFHIMNDCGCEYSLEM 145
+ E K V F M G ++
Sbjct: 415 AGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVA 474
Query: 146 LNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
N + +L + + EAK + L E + P+ + Y ++K Y VG + EA + + M
Sbjct: 475 CNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMI 534
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCK 260
G EP + VV+ +I++ +K + DEA ++F RM D+ LS TY ++ + K
Sbjct: 535 RNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFD-----RMKDMKLSPTVVTYNTLLSGLGK 589
Query: 261 RGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISL 316
G++ +A + E M + + ++ ++++ + A K+ ++ KPD+
Sbjct: 590 EGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLT 649
Query: 317 YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKG 367
Y+ +I GL++ + A F ++ K+ P T LL G L K G+ G
Sbjct: 650 YNTVIYGLIKENKVNHAFWFFHQL-KKSMHPDHVTICTLLPG-LVKCGQIG 698
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 163/391 (41%), Gaps = 46/391 (11%)
Query: 58 LFFQYTQKAQPCFAHNSITFNRMVDII---GKSRNIDLFWETLQEMGRRRLVNDKTFKIA 114
L + Y+ P H + T N M++ + K ++ +E +Q+ RR ++ T+
Sbjct: 106 LSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLD--TYLTI 163
Query: 115 LMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWI 173
L+ L++M + M G + N ++ L Q EA + ++ SE +
Sbjct: 164 FKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGL 223
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
KP+ Y L+ D + M D G P++ I + K DEA +
Sbjct: 224 KPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYE 283
Query: 234 VFQMMRVKRMDDLG----LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSI 289
+F +RMDD G L TY ++ID +C G++ A + +M G + D + ++
Sbjct: 284 IF-----RRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITL 338
Query: 290 IYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGC 345
+ G L + ++E PD+ + L+ L + R EA F M K+G
Sbjct: 339 LDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGI 398
Query: 346 EPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEV 405
P +HTY L + GL++AG+ DA K ++ + + GV+
Sbjct: 399 LPNLHTYNTL-----------------------ICGLLRAGRIEDALKLLDTMESVGVQP 435
Query: 406 PRFDYNKFLHYY--SNEEG--VVMFEEVGKK 432
+ Y F+ Y+ S E G V FE++ K
Sbjct: 436 TAYTYITFIDYFGKSGETGKAVETFEKMKAK 466
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 140/323 (43%), Gaps = 37/323 (11%)
Query: 149 VVKTLCQRKLVVEAKYLILKLSE--WIKPNEIAYGWLIKGYCDVGDLIE---ASKIWNL- 202
+V+ LC+ K + A + K ++ I P +Y C +G+L+E K W+L
Sbjct: 758 LVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYN------CLIGELLEVHYTEKAWDLF 811
Query: 203 --MTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCK 260
M + G P + ++ K K E ++++ M +R + TY IVI + K
Sbjct: 812 KDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAI-TYNIVISSLAK 870
Query: 261 RGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISL 316
+ +A ++ T +I GL GRL EA ++ EE+ KP+ ++
Sbjct: 871 SNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAI 930
Query: 317 YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML-----LQG-------HLGKRG 364
++ LI G ++ A Q+F+ M+ G P + +Y +L L G + +
Sbjct: 931 FNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELK 990
Query: 365 RKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGV 423
G DP + ++ I + GL K+ + +A + NRG+ + YN + N
Sbjct: 991 STGLDPDFIAYNRI-INGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLML---NLGLA 1046
Query: 424 VMFEEVGKKLREVGLADL-ADIF 445
M E+ + E+ LA L D+F
Sbjct: 1047 GMVEQAKRMYEELQLAGLEPDVF 1069
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 125/303 (41%), Gaps = 19/303 (6%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHI 133
I N ++D + K+ +D W+ M +L T+ L L + ++K + F
Sbjct: 543 IVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFES 602
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGD 192
M C + N ++ C+ V A + K++ KP+ + Y +I G
Sbjct: 603 MIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYG------ 656
Query: 193 LIEASKI----WNL-MTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
LI+ +K+ W + P + ++ K + +A+ + + + +
Sbjct: 657 LIKENKVNHAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVN 716
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
S + ++ ++ +A EE+ GI ++ L ++ L R AY++ +
Sbjct: 717 RSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFD 776
Query: 308 EIEK-----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
+ K P ++ Y+ LI LL + +A +F++M GC P T+ MLL H GK
Sbjct: 777 KFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVH-GK 835
Query: 363 RGR 365
G+
Sbjct: 836 SGK 838
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 92/223 (41%), Gaps = 23/223 (10%)
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
T +++++ K+ + E M K+ I D T +I L RG LR+ V+ ++
Sbjct: 124 TCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKM 183
Query: 310 EKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
K L Y+GLI L++ EA +V+R M+ G +P++ TY L+ KR
Sbjct: 184 RKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDS 243
Query: 366 K------------GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
+ G P V TI + L +AGK +A + R+ + G Y
Sbjct: 244 EMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVL 303
Query: 414 LHYYSN-------EEGVVMFEEVGKKLREVGLADLADIFQRYG 449
+ N +E V + G K +V L D F +G
Sbjct: 304 IDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFG 346
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 141/286 (49%), Gaps = 7/286 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
N ITFN ++D K N+ +EM R+ L N T+ + L+ +L + + +
Sbjct: 272 NEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALW 331
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDV 190
M G + ++ N ++ C++K++ EA+ L ++E + PN I + +I +C
Sbjct: 332 DKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKA 391
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G + E + N M DEG P++ + +I + A K+ M + + T
Sbjct: 392 GMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELK-ADVVT 450
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y I+I CK G+ S+A +L EM G++ +++T ++++ G G L+ A KV ++E
Sbjct: 451 YNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQME 510
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
K ++ Y+ LIKG + + +A ++ EM+++G P TY
Sbjct: 511 KEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTY 556
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 159/373 (42%), Gaps = 48/373 (12%)
Query: 98 QEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQR 156
+EM +RR+ N TF I + L + +L K + + G ++ N ++ C++
Sbjct: 189 KEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKK 248
Query: 157 ----KLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSI 212
K+ L L+ I PNEI + LI G+C +++ A + M +G +P+I
Sbjct: 249 GSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNI 308
Query: 213 DVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAY 268
+ +I K DEA+ ++ +M LGL T+ +I+ CK+ I +A
Sbjct: 309 VTYNSLINGLSNNGKLDEAIALWD-----KMVGLGLKPNIVTFNALINGFCKKKMIKEAR 363
Query: 269 TMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY----KVVEEIEKPDISLYHGLIKGL 324
+ +++ ++ + + +T +++I G + E + +++E P++S Y+ LI GL
Sbjct: 364 KLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGL 423
Query: 325 LRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVK 384
R + R A ++ EM + + TY I +GG K
Sbjct: 424 CRNQNVRAAKKLLNEMENYELKADVVTY-----------------------NILIGGWCK 460
Query: 385 AGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGV-------VMFEEVGKKLREVG 437
G+ A K + ++N GV+ YN + Y E + E+ GK+ V
Sbjct: 461 DGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVT 520
Query: 438 LADLADIFQRYGK 450
L F + GK
Sbjct: 521 YNVLIKGFCKTGK 533
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 106/227 (46%), Gaps = 3/227 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
N +TFN +++ K + I + ++ + LV N TF + + +++
Sbjct: 342 NIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALH 401
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDV 190
+ M D G ++ N ++ LC+ + V AK L+ ++ + +K + + Y LI G+C
Sbjct: 402 NSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKD 461
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G+ +A K+ M + G +P+ + +++ + A+KV M K + T
Sbjct: 462 GEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQME-KEGKRANVVT 520
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
Y ++I CK GK+ A +L EM ++G+ + T + +L +G
Sbjct: 521 YNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVVRLEMLEKG 567
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 97/216 (44%), Gaps = 24/216 (11%)
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
L L++ ++ + K + + + +EM KR I+ + T + I GL G+L +A V
Sbjct: 163 LSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDV 222
Query: 306 VEEIE----KPDISLYHGLIKGLLRLRRARE---ATQVFREMIKRGCEPTMHTYIMLLQG 358
+E+I+ P+I Y+ LI G + A + A + +EM+ P T+ L+ G
Sbjct: 223 IEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDG 282
Query: 359 HLGKRG------------RKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEV 405
R+G P +V ++++ + GL GK +A ++++ G++
Sbjct: 283 FCKDENVLAAKNAFEEMQRQGLKPNIVTYNSL-INGLSNNGKLDEAIALWDKMVGLGLKP 341
Query: 406 PRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADL 441
+N ++ + ++ M +E K ++ DL
Sbjct: 342 NIVTFNALINGFCKKK---MIKEARKLFDDIAEQDL 374
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 147/309 (47%), Gaps = 15/309 (4%)
Query: 61 QYTQKAQPCF--------AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TF 111
YT+KA F A ++ TFN ++ + GKS I +E +EM RR D T+
Sbjct: 802 HYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITY 861
Query: 112 KIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE 171
I + +LA+ L K ++FF+ + + ++ L + + EA L ++S+
Sbjct: 862 NIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSD 921
Query: 172 W-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDE 230
+ KPN + LI GY +GD A +++ M +EG P + +++ + DE
Sbjct: 922 YGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDE 981
Query: 231 AMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
A+ F ++ +D Y +I+ + K ++ +A + EM RGI D T +S++
Sbjct: 982 ALYYFNELKSTGLDP-DFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLM 1040
Query: 291 YGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
L G + +A ++ EE++ +PD+ Y+ LI+G A V++ M+ GC
Sbjct: 1041 LNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCN 1100
Query: 347 PTMHTYIML 355
P + TY L
Sbjct: 1101 PNIGTYAQL 1109
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 94/401 (23%), Positives = 168/401 (41%), Gaps = 67/401 (16%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIM 134
T++ ++ +GK R+ ++ L+EM L N TF I + L ++ + F M
Sbjct: 229 TYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRM 288
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDL 193
+D GC L ++ LC + AK L +K+ + KP+++ Y L+ + D GDL
Sbjct: 289 DDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDL 348
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR-------------- 239
+ W+ M +G+ P + +++ K DEA F +MR
Sbjct: 349 DTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTL 408
Query: 240 ----------------VKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGI 279
+ M+ +G+ TY I ID+ K G+ +A E+M +GI
Sbjct: 409 ICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGI 468
Query: 280 EADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQ 335
+ + ++ +Y L GRLREA + + + PD Y+ ++K ++ + EA
Sbjct: 469 VPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVN 528
Query: 336 VFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYV 395
+ EMI+ GCEP + +VN + L KAG+ +A +
Sbjct: 529 LLSEMIRNGCEPDV--------------------IVVN---SLIDSLYKAGRVDEAWQMF 565
Query: 396 ERVMNRGVEVPRFDYNKFLHYYSNE----EGVVMFEEVGKK 432
+R+ + + YN L E + + +FE + +K
Sbjct: 566 DRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEK 606
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 152/351 (43%), Gaps = 52/351 (14%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND------------- 108
++Q + + +TF +VD++ K+R+ D + T M ++ ++ +
Sbjct: 355 WSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLR 414
Query: 109 -----------------------KTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEM 145
T+ I + + E K V F M G ++
Sbjct: 415 AGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVA 474
Query: 146 LNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
N + +L + + EAK + L E + P+ + Y ++K Y VG + EA + + M
Sbjct: 475 CNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMI 534
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCK 260
G EP + VV+ +I++ +K + DEA ++F RM D+ LS TY ++ + K
Sbjct: 535 RNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFD-----RMKDMKLSPTVVTYNTLLSGLGK 589
Query: 261 RGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISL 316
G++ +A + E M ++ + ++ ++++ + A K+ ++ KPD+
Sbjct: 590 EGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLT 649
Query: 317 YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKG 367
Y+ +I GL++ + A F ++ K+ P T LL G L K G+ G
Sbjct: 650 YNTVIYGLIKENKVNHAFWFFHQL-KKSMHPDHVTICTLLPG-LVKCGQIG 698
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 129/269 (47%), Gaps = 8/269 (2%)
Query: 93 FWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKT 152
FW ++ G + + TF I + L + R+ + F +M G +L N ++
Sbjct: 354 FWSQMEADGY--MPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICG 411
Query: 153 LCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPS 211
L + + +A L+ + S ++P Y I + G+ +A + + M +G P+
Sbjct: 412 LLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPN 471
Query: 212 IDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTML 271
I + + + ++ + EA +F +R + + TY +++ K G++ +A +L
Sbjct: 472 IVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSV-TYNMMMKCYSKVGQVDEAVNLL 530
Query: 272 EEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRL 327
EM + G E D + ++S+I L GR+ EA+++ + ++ P + Y+ L+ GL +
Sbjct: 531 SEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKE 590
Query: 328 RRAREATQVFREMIKRGCEPTMHTYIMLL 356
R ++A ++F MI++ C P ++ LL
Sbjct: 591 GRVQKAIELFESMIEKKCSPNTISFNTLL 619
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 163/391 (41%), Gaps = 46/391 (11%)
Query: 58 LFFQYTQKAQPCFAHNSITFNRMVDII---GKSRNIDLFWETLQEMGRRRLVNDKTFKIA 114
L + Y+ P H + T N M++ + K ++ +E +Q+ RR ++ T+
Sbjct: 106 LSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLD--TYLTI 163
Query: 115 LMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWI 173
L+ L++M + M G + N ++ L Q EA + ++ SE +
Sbjct: 164 FKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGL 223
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
KP+ Y L+ D + M D G P++ I + K DEA +
Sbjct: 224 KPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYE 283
Query: 234 VFQMMRVKRMDDLG----LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSI 289
+F +RMDD G L TY ++ID +C G++ A + +M G + D + ++
Sbjct: 284 IF-----RRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITL 338
Query: 290 IYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGC 345
+ G L + ++E PD+ + L+ L + R EA F M K+G
Sbjct: 339 LDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGI 398
Query: 346 EPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEV 405
P +HTY L + GL++AG+ DA K + + + GV+
Sbjct: 399 LPNLHTYNTL-----------------------ICGLLRAGRIEDALKLLGTMESVGVQP 435
Query: 406 PRFDYNKFLHYY--SNEEG--VVMFEEVGKK 432
+ YN F+ Y+ S E G V FE++ K
Sbjct: 436 TAYTYNIFIDYFGKSGETGKAVETFEKMKAK 466
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 140/323 (43%), Gaps = 37/323 (11%)
Query: 149 VVKTLCQRKLVVEAKYLILKLSE--WIKPNEIAYGWLIKGYCDVGDLIE---ASKIWNL- 202
+V+ LC+ K + A + K ++ I P +Y C +G+L+E K W+L
Sbjct: 758 LVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYN------CLIGELLEVHYTEKAWDLF 811
Query: 203 --MTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCK 260
M + G P + ++ K K E ++++ M +R + TY IVI + K
Sbjct: 812 KDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAI-TYNIVISSLAK 870
Query: 261 RGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISL 316
+ +A ++ T +I GL GRL EA ++ EE+ KP+ ++
Sbjct: 871 SNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAI 930
Query: 317 YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML-----LQG-------HLGKRG 364
++ LI G ++ A Q+F+ M+ G P + +Y +L L G + +
Sbjct: 931 FNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELK 990
Query: 365 RKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGV 423
G DP + ++ I + GL K+ + +A + NRG+ + YN + N
Sbjct: 991 STGLDPDFIAYNRI-INGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLML---NLGLA 1046
Query: 424 VMFEEVGKKLREVGLADL-ADIF 445
M E+ + E+ LA L D+F
Sbjct: 1047 GMVEQAKRMYEELQLAGLEPDVF 1069
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 92/223 (41%), Gaps = 23/223 (10%)
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
T +++++ K+ + E M K+ I D T +I L RG LR+ V+ ++
Sbjct: 124 TCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKM 183
Query: 310 EKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
K L Y+GLI L++ EA +V+R M+ G +P++ TY L+ KR
Sbjct: 184 RKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDS 243
Query: 366 K------------GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
+ G P V TI + L +AGK +A + R+ + G Y
Sbjct: 244 EMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVL 303
Query: 414 LHYYSN-------EEGVVMFEEVGKKLREVGLADLADIFQRYG 449
+ N +E V + G K +V L D F +G
Sbjct: 304 IDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFG 346
>gi|224125420|ref|XP_002329801.1| predicted protein [Populus trichocarpa]
gi|222870863|gb|EEF07994.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 125/252 (49%), Gaps = 7/252 (2%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
DK++ L E +LK ++F+ M + G S+ LN ++K LC+ ++A + I
Sbjct: 119 TDKSYISVFAILVEENQLKVAMSFYKYMREMGVRQSVVSLNVLIKALCKNSGTIDAAFEI 178
Query: 167 LK--LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFK 224
+ P+ YG LI G C +G EA +++ M +G PS+ ++ +
Sbjct: 179 FREMPKRGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKGCSPSVVTYSCLMHGLCQ 238
Query: 225 INKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNL 284
DEAM +F M+ K ++ + TY ++D +CK G +A +LE M ++ + + +
Sbjct: 239 AGNVDEAMGLFDKMKKKAIEP-NVFTYSSLMDGLCKNGGSLEAMELLEMMVRKRHKPNMV 297
Query: 285 TLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREM 340
T S++I GL G+L EA + ++ ++ KPD LY +I G +R+ +EA EM
Sbjct: 298 TYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEAATYLDEM 357
Query: 341 IKRGCEPTMHTY 352
+ P T+
Sbjct: 358 VLGQISPNRVTW 369
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 138/304 (45%), Gaps = 17/304 (5%)
Query: 75 ITFNRMVDIIGK-SRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFH 132
++ N ++ + K S ID +E +EM +R D T+ + L ++ + + F
Sbjct: 156 VSLNVLIKALCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEAKELFK 215
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVG 191
M+ GC S+ + ++ LCQ V EA L K+ + I+PN Y L+ G C G
Sbjct: 216 EMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNG 275
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD-DLGLST 250
+EA ++ +M + +P++ +I K K EA++ M+++ + D GL
Sbjct: 276 GSLEAMELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGL-- 333
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLS-------SIIYGLLARGRLREAY 303
Y +I+ C K +A T L+EM I + +T S ++ GL G L ++
Sbjct: 334 YGKIINGFCNIRKFQEAATYLDEMVLGQISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSF 393
Query: 304 KVVEEIEKPDISLYHG----LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
++ + IS+ G L+K + +A ++F EM+ GC P + ++ G
Sbjct: 394 QLYIGMRTRGISIDAGTFDSLVKCFCKKGDLHKAARIFDEMVLDGCVPDHGIWSAVVGGF 453
Query: 360 LGKR 363
+R
Sbjct: 454 WDRR 457
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 132/299 (44%), Gaps = 26/299 (8%)
Query: 170 SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD 229
S + + +G +I + A ++ N M +E + ++ + + +++
Sbjct: 43 SNGFRHDHTTFGVMISKLVSANEFRPAEEMLNRMKEEKCRITEEIFLSICRGYGRVHMPL 102
Query: 230 EAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
+A++VF +M+D G +Y V + + ++ A + + M + G+ ++
Sbjct: 103 DAIRVFH-----KMNDFGCKPTDKSYISVFAILVEENQLKVAMSFYKYMREMGVRQSVVS 157
Query: 286 LSSIIYGLLAR-GRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREM 340
L+ +I L G + A+++ E+ K PD Y LI GL +L + EA ++F+EM
Sbjct: 158 LNVLIKALCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEAKELFKEM 217
Query: 341 IKRGCEPTMHTYIMLLQ------------GHLGKRGRKGPDPLVNFDTIFVGGLVKAGKS 388
+GC P++ TY L+ G K +K +P V + + GL K G S
Sbjct: 218 DTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGS 277
Query: 389 LDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLADIFQR 447
L+A + +E ++ + + Y+ ++ E + E +++ GL A ++ +
Sbjct: 278 LEAMELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGK 336
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 95/239 (39%), Gaps = 42/239 (17%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LK 168
T+ + L + + + + F M E ++ + ++ LC+ +EA L+ +
Sbjct: 228 TYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMELLEMM 287
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
+ + KPN + Y LI G C G L EA + + M +G +P + K+I F I K
Sbjct: 288 VRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRKF 347
Query: 229 DEAMKVFQMMRVKRMDD--------------------------------LGLSTYRIVID 256
EA M + ++ +G+ T I ID
Sbjct: 348 QEAATYLDEMVLGQISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMRTRGISID 407
Query: 257 ---------WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
CK+G + +A + +EM G D+ S+++ G R ++REA++ +
Sbjct: 408 AGTFDSLVKCFCKKGDLHKAARIFDEMVLDGCVPDHGIWSAVVGGFWDRRKVREAFESI 466
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 162/363 (44%), Gaps = 27/363 (7%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVN-DKTFKIALM-TLAEVRELKKMVNFFHI 133
TF +VD + K+ + +E EM V D+ A++ TL + + +K+ F
Sbjct: 191 TFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQ 250
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDVGD 192
M CG N ++ L + EA K L L++ P E+ YG L+ C G
Sbjct: 251 MEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGT 310
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLSTY 251
L A +++ +M GF P+ + +I F K + EA +F +M+ D+ T+
Sbjct: 311 LERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDV--ITH 368
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK 311
++ID +CK G QA EEM + G + + +T ++II GL GR+ A+++++ +
Sbjct: 369 TVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIA 428
Query: 312 ----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG--------- 358
PD Y L+ G +L R EA Q+ E+ K P + Y L++G
Sbjct: 429 HGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVEN 488
Query: 359 ------HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNK 412
K + DP + I GL K G+ +A + +R+++ G + YN
Sbjct: 489 TLDDLFEQSKAAAENLDPGLCCSIIV--GLCKTGRLDEACRIFQRMVSEGCKPDATTYNI 546
Query: 413 FLH 415
++
Sbjct: 547 LIN 549
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 150/314 (47%), Gaps = 10/314 (3%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMT 117
FF++ + Q F H+ T+N +++++ +N + +EM + + N +F I + +
Sbjct: 105 FFRWAGE-QAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRS 163
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE--WIKP 175
A R V F IM C+ L +V LC+ + +A + ++ ++ P
Sbjct: 164 FARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPP 223
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
+ + +++ + EA +++ M GF P + MI+ K EA+KV
Sbjct: 224 DRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVL 283
Query: 236 QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
M K + TY I+++ +CK G + +A + M G +++ +S+I+G
Sbjct: 284 DNMLAKACVPTEV-TYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAK 342
Query: 296 RGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
GR++EA + +E+ +PD+ + +I GL + +A + F EM++ GC+P + T
Sbjct: 343 SGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVT 402
Query: 352 YIMLLQGHLGKRGR 365
Y ++QG L K GR
Sbjct: 403 YTTIIQG-LSKIGR 415
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 114/465 (24%), Positives = 190/465 (40%), Gaps = 48/465 (10%)
Query: 30 LSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRN 89
+++ F + + + F S R + + + + + IT M+D + KS N
Sbjct: 321 MAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGN 380
Query: 90 IDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIMNDC---GCEYSLEM 145
+ ++ +EM R N T+ + L+++ ++ N F IM GC
Sbjct: 381 FEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKI---GRVANAFRIMKGMIAHGCFPDSVT 437
Query: 146 LNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVG-------DLIEAS 197
++ C+ + EA L+ +L + PN Y L+KG CD G DL E S
Sbjct: 438 YICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQS 497
Query: 198 KIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDW 257
K D G SI I K + DEA ++FQ M V +TY I+I+
Sbjct: 498 KAAAENLDPGLCCSI------IVGLCKTGRLDEACRIFQRM-VSEGCKPDATTYNILING 550
Query: 258 MC--KRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK---- 311
+C + ++ +A+ +L ++ G D +T + + GL G + A K++EE
Sbjct: 551 LCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWN 610
Query: 312 PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL-GKRGR----- 365
D+ Y L GL + A +F+EM+++G P Y ++ G + GK+
Sbjct: 611 ADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKF 670
Query: 366 ------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPR-FDYNKFLHYYS 418
KG P V T V L AG +A E ++ RG V Y+ +H +
Sbjct: 671 FDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFC 730
Query: 419 N----EEGVVMFEEV---GKKLREVGLADLADIFQRYGKKMATRE 456
+ + +FE++ G V A L D R GK +E
Sbjct: 731 KALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQE 775
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 80/186 (43%), Gaps = 6/186 (3%)
Query: 178 IAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQM 237
+AY L G C G + A ++ M +G P +I K K ++A K F
Sbjct: 614 VAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDE 673
Query: 238 MRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRG-IEADNLTLSSIIYGLLAR 296
M + + ++TY ++ +C G + +A+ E M RG + + ++I+G
Sbjct: 674 M-IGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKA 732
Query: 297 GRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
++ A K+ E++ P L GL+R + +A ++ +EM G P T+
Sbjct: 733 LKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATF 792
Query: 353 IMLLQG 358
+L G
Sbjct: 793 TAILDG 798
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/274 (19%), Positives = 121/274 (44%), Gaps = 11/274 (4%)
Query: 73 NSITFNRMVDIIGKSRN--IDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVN 129
++ T+N +++ + +SR ++ + L ++ + D T+ + L ++ E+ + V
Sbjct: 540 DATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVK 599
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYC 188
+ G + + LC + V A L ++ + P+ AY +I G
Sbjct: 600 MLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLI 659
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
L +A K ++ M +G +P++ +++ DEA F+ M + +
Sbjct: 660 KGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSV 719
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
Y +I CK K+ A + E+M RG +T +S+ GL+ G+ +A ++++E
Sbjct: 720 MIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQE 779
Query: 309 I----EKPDISLYHGLIKGLLRLRRAREATQVFR 338
+ P + + ++ G LR++ E+ ++ +
Sbjct: 780 MAAGGSPPHAATFTAILDG---LRKSDESGKLLK 810
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 80/175 (45%), Gaps = 20/175 (11%)
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
TY +++ + SQ Y + EEM K GI + + + +I R +A E +
Sbjct: 121 TYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIM 180
Query: 310 E----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP---TMHTYIM--LLQGHL 360
+ KPD+ + L+ L + +A +VF EM+ G P +HT ++ LL+
Sbjct: 181 KRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKR 240
Query: 361 GKRGRKG---------PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
K R+ P + ++T+ + GL KAG + +A K ++ ++ + VP
Sbjct: 241 VKEAREVFGQMEKCGFPPDAIAYNTM-IDGLAKAGHAQEALKVLDNMLAKAC-VP 293
>gi|255540805|ref|XP_002511467.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550582|gb|EEF52069.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 482
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 170/380 (44%), Gaps = 21/380 (5%)
Query: 55 PVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKI 113
P L F P + H + +F+ +DI + R+ W + M RL + +TF I
Sbjct: 73 PKALHFFKILSHHPSYCHQASSFDHAIDICARLRDFRTLWFLVSRMRSCRLGPSPRTFAI 132
Query: 114 ALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWI 173
A + + + V F M++ GC L N ++ LC+ K V A L L
Sbjct: 133 IAERYAAMGKPHRAVTVFMSMHEYGCFQDLSSFNTILDVLCKSKRVEMAYNLFKALKGKF 192
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
K + ++Y ++ G+C + +A ++ M + G P++ + M+ +F+ + +EA
Sbjct: 193 KADCVSYNIIVNGWCLIKRTPKALEMLKEMVERGLTPNLTTYNIMLNGYFRAGQTNEAWG 252
Query: 234 VFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
F M+ KR D+ + TY VI + G+I +A + +M K G+ T +++I L
Sbjct: 253 FFLEMK-KRKCDIDVVTYTSVIHGLGVVGEIKRARNVFNQMVKDGVLPSVATFNALIQIL 311
Query: 294 LARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
+ + A + EE+ K P+ Y+ +I+GL + + A ++ M CEP +
Sbjct: 312 CKKDSVENAILIFEEMVKRGYVPNSITYNLVIRGLCHVGEMQRAMELMERMEDDDCEPNV 371
Query: 350 HTYIMLLQ-----GHLGK-----RGRKGPDPLVNFDT--IFVGGLVKAGKS---LDAAKY 394
TY +L++ G + K + D L N DT I + + S L A K
Sbjct: 372 QTYNILIRYFCDAGEIEKGLDLFQKMGNGDCLPNLDTYNILINSMFVRKNSDNLLVAGKL 431
Query: 395 VERVMNRGVEVPRFDYNKFL 414
+ +++RG + +N+ L
Sbjct: 432 LVEMVDRGFLPRKLTFNRVL 451
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 111/234 (47%), Gaps = 14/234 (5%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
N T+N M++ ++ + W EM +R+ ++ T+ + L V E+K+ N F
Sbjct: 230 NLTTYNIMLNGYFRAGQTNEAWGFFLEMKKRKCDIDVVTYTSVIHGLGVVGEIKRARNVF 289
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIK----PNEIAYGWLIKGY 187
+ M G S+ N +++ LC++ V A IL E +K PN I Y +I+G
Sbjct: 290 NQMVKDGVLPSVATFNALIQILCKKDSVENA---ILIFEEMVKRGYVPNSITYNLVIRGL 346
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL- 246
C VG++ A ++ M D+ EP++ + +I F + ++ + +FQ M D L
Sbjct: 347 CHVGEMQRAMELMERMEDDDCEPNVQTYNILIRYFCDAGEIEKGLDLFQKM--GNGDCLP 404
Query: 247 GLSTYRIVIDWMCKRGKISQ---AYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
L TY I+I+ M R A +L EM RG LT + ++ GLL G
Sbjct: 405 NLDTYNILINSMFVRKNSDNLLVAGKLLVEMVDRGFLPRKLTFNRVLDGLLLTG 458
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 73/167 (43%), Gaps = 5/167 (2%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHIM 134
TFN ++ I+ K +++ +EM +R V N T+ + + L V E+++ + M
Sbjct: 303 TFNALIQILCKKDSVENAILIFEEMVKRGYVPNSITYNLVIRGLCHVGEMQRAMELMERM 362
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYC---DV 190
D CE +++ N +++ C + + L K+ PN Y LI +
Sbjct: 363 EDDDCEPNVQTYNILIRYFCDAGEIEKGLDLFQKMGNGDCLPNLDTYNILINSMFVRKNS 422
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQM 237
+L+ A K+ M D GF P +++++ D A ++ +
Sbjct: 423 DNLLVAGKLLVEMVDRGFLPRKLTFNRVLDGLLLTGNQDFAKEILSL 469
>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 443
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 136/280 (48%), Gaps = 8/280 (2%)
Query: 84 IGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSL 143
IGK+R E +++ G + + T+ + + + M GC S+
Sbjct: 132 IGKTRKATRIMEIIEDSGA--VPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSV 189
Query: 144 EMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNL 202
N ++ LC++ L+ A ++ K+ + PN ++Y L+ G+C + A +
Sbjct: 190 VTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGK 249
Query: 203 MTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRG 262
MT G P I + ++ K K D A+++ + K + L TY VID + K G
Sbjct: 250 MTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPV-LITYNTVIDGLSKVG 308
Query: 263 KISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYH 318
K QA +L+EM +G++ D +T SS++ GL G++ EA K ++E KP+ Y+
Sbjct: 309 KTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYN 368
Query: 319 GLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
++ GL + R+ A M++RGC+PT +Y +L++G
Sbjct: 369 AIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEG 408
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 125/257 (48%), Gaps = 19/257 (7%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+ I LI+G+C +G +A++I ++ D G P + + +I + +A K+
Sbjct: 117 PDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKL 176
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
M V+R + T+ I+I+++C++G + +A +LE+M K G ++L+ + +++G
Sbjct: 177 LADM-VRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFC 235
Query: 295 ARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
++ A + + ++ PDI Y+ L+ L + + A ++ ++ +GC P +
Sbjct: 236 KEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLI 295
Query: 351 TYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVER 397
TY ++ G L K G+ KG P + + VGGL + GK +A K+
Sbjct: 296 TYNTVIDG-LSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHD 354
Query: 398 VMNRGVEVPRFDYNKFL 414
+ GV+ YN +
Sbjct: 355 LEVLGVKPNAITYNAIM 371
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 111/237 (46%), Gaps = 3/237 (1%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHI 133
+TFN +++ + + + + L++M + N ++ L + +++++ + +
Sbjct: 190 VTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGK 249
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGD 192
M GC + N ++ LC+ V A L+ +LS + P I Y +I G VG
Sbjct: 250 MTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGK 309
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+A+K+ + M +G +P I ++ + K DEA+K F + V + + TY
Sbjct: 310 TDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAI-TYN 368
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
++ +CK K +A L M +RG + + + +I GL G +EA +++ E+
Sbjct: 369 AIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNEL 425
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 61/145 (42%), Gaps = 16/145 (11%)
Query: 293 LLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
L+ G L E ++ +E + + PDI LI+G ++ + R+AT++ + G P
Sbjct: 94 LVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPD 153
Query: 349 MHTYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVE 396
+ TY +L+ G L R+G P V I + L + G A +E
Sbjct: 154 VITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLE 213
Query: 397 RVMNRGVEVPRFDYNKFLHYYSNEE 421
++ G YN LH + E+
Sbjct: 214 KMPKHGCTPNSLSYNPLLHGFCKEK 238
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 104/429 (24%), Positives = 187/429 (43%), Gaps = 61/429 (14%)
Query: 58 LFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALM 116
LF + TQ+ P N +T+N ++ + K+R +D L++M G ++ T+ +
Sbjct: 233 LFHEMTQQGVP---PNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIH 289
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAK-YLILKLSEWIKP 175
+ + + K+ V F M G + + V LC+ + EA+ + L++ K
Sbjct: 290 GYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKL 349
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
N I+Y L+ GY G L++ S ++NLM +G P+ V + ++ + K EAM +F
Sbjct: 350 NIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIF 409
Query: 236 QMM--------------------RVKRMDDL--------------GLSTYRIVIDWMCKR 261
+ M R+ MDD + Y+ +I C
Sbjct: 410 EDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTH 469
Query: 262 GKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLY 317
G + +A ++ E+ +G+ L+ +S+I L GR+ EA ++ + I EK D++++
Sbjct: 470 GDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIF 529
Query: 318 HGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR------------ 365
LI G + + EA +V M+ G EP + TY L+ G K GR
Sbjct: 530 TSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNG-CCKNGRIDDGLILFRELL 588
Query: 366 -KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL----HYYSNE 420
KG P I + GL AG++ A + + ++ G+ V Y+ L E
Sbjct: 589 HKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTE 648
Query: 421 EGVVMFEEV 429
E + +F+++
Sbjct: 649 EAITVFQKL 657
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 91/410 (22%), Positives = 175/410 (42%), Gaps = 31/410 (7%)
Query: 56 VYLFFQYTQKAQPCFAHNSI-TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIA 114
V LF + + P A ++ T++ ++D ++R +DL + + R+ + D +
Sbjct: 84 VALFNRMSTGTGPRVALPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSS 143
Query: 115 LM-TLAEVRELKKMVN-FFHIMNDCGCEYSLEMLNKVVKTLC---QRKLVVEAKYLILKL 169
L+ L + + + V+ FH M + GC + V+K++C + + ++ + +K
Sbjct: 144 LLRGLCDAKRTDEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQ 203
Query: 170 SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD 229
N + Y ++ G G + EA +++ MT +G P++ + +I K D
Sbjct: 204 GGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVD 263
Query: 230 EAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSI 289
+A + + M + + TY +I G+ QA M +EM RG+ + +T S+
Sbjct: 264 KAQGILRQMVGNGVQPDNV-TYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTF 322
Query: 290 IYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGC 345
+ L GR+ EA + + + K +I Y L+ G + + +F M++ G
Sbjct: 323 VAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGI 382
Query: 346 EPTMHTYIMLLQGH---------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLD 390
P H + +L+ G+ + KRG PD L I + G D
Sbjct: 383 VPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLN-PDVLTYLAVIH--AFCRMGSMDD 439
Query: 391 AAKYVERVMNRGVEVPRFD-YNKFLHYYSNEEGVVMFEEVGKKLREVGLA 439
A ++++GVE P F Y + + +V EE+ ++R GL
Sbjct: 440 AMDKFNHMIDKGVE-PNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLG 488
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/385 (21%), Positives = 163/385 (42%), Gaps = 56/385 (14%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N FN +V+ K + ++M +R L D T+ + + + ++ F
Sbjct: 385 NQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKF 444
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
+ M D G E + + +++ C +V+A+ L+ ++ ++ + P +++ LI C
Sbjct: 445 NHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKE 504
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G + EA +I++++ G + +++ +I+ + I K EA +V M V + + T
Sbjct: 505 GRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAM-VSVGIEPDIVT 563
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y +++ CK G+I + E+ +G++ T I+ GL GR A ++ +E+
Sbjct: 564 YGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMI 623
Query: 311 KPDISL----YHGLIKGLLR-----------------------------------LRRAR 331
+ I++ Y L+ GL R RR
Sbjct: 624 ESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRRE 683
Query: 332 EATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG-------------RKGPDPLVNFDTIF 378
EA +F + G PT+ TY ++++ +L K G + G P +F +
Sbjct: 684 EAEGLFASIPDYGLVPTVQTYTIMME-NLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVI 742
Query: 379 VGGLVKAGKSLDAAKYVERVMNRGV 403
V L++ G+ + A Y+ RV + +
Sbjct: 743 VRTLLEKGEIVKAGIYMCRVDGKSI 767
>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 150/296 (50%), Gaps = 8/296 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+ +N +++ + K + + ++ EM +R+ D TF ++ V +LK+ FH
Sbjct: 200 VMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHE 259
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAK-YLILKLSEWIKPNEIAYGWLIKGYCDVGD 192
M + + +V LC+ + AK L + + + + P+ + Y L+ GYC V +
Sbjct: 260 MVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNE 319
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ +A +++ M+ G P + MI KI DEA+ +F+ M K + TY
Sbjct: 320 VNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAP-DTVTYN 378
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
+ID +CK G+IS A+ +++EM GI AD LT +S+I L + +A +V++I+
Sbjct: 379 SLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQ 438
Query: 311 --KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
+P + Y+ LI GL + R + A VF++++ +G TY +++ G L K G
Sbjct: 439 GIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMING-LCKEG 493
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/385 (21%), Positives = 169/385 (43%), Gaps = 77/385 (20%)
Query: 74 SITFNRMVDII---GKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNF 130
+ITFN +++ I GK + F + + +G ++ +++ + L ++ E + +
Sbjct: 129 TITFNTLINGICLNGKLKEALHFHDHVIALGFH--LDQVSYRTLINGLCKIGETRAALQM 186
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCD 189
+ + M N ++ +LC+ K V +A L ++ ++ I P+ + + LI G+C
Sbjct: 187 LKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCV 246
Query: 190 VGDLIEASKIWN-----------------------------------LMTDEGFEPSIDV 214
VG L EA +++ +M +G P +
Sbjct: 247 VGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVT 306
Query: 215 VDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTM 270
+++ + +N+ ++A VF M LG++ +Y I+I+ + K + +A ++
Sbjct: 307 YSSLMDGYCLVNEVNKAKHVFS-----TMSRLGVAPHAHSYNIMINGLGKIKMVDEALSL 361
Query: 271 LEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLR 326
+EM +GI D +T +S+I GL GR+ A+++V+E+ DI Y+ LI L +
Sbjct: 362 FKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCK 421
Query: 327 LRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAG 386
+A + +++ +G +P+M+TY I + GL K G
Sbjct: 422 NHHIDKAIALVKKIKDQGIQPSMYTY-----------------------NILIDGLCKGG 458
Query: 387 KSLDAAKYVERVMNRGVEVPRFDYN 411
+ +A + ++ +G V + YN
Sbjct: 459 RLKNAQDVFQDLLIKGYSVNAWTYN 483
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 111/263 (42%), Gaps = 34/263 (12%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
I P + + L+ YC +G++ A I+ + G+ P+ + +I K EA+
Sbjct: 90 ITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEAL 149
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
F + L +YR +I+ +CK G+ A ML+++ + + D + + II
Sbjct: 150 H-FHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINS 208
Query: 293 LLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
L + +AY++ E+ PD+ ++ LI G + + +EA +F EM+ + P
Sbjct: 209 LCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPD 268
Query: 349 MHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRF 408
++T+ +I V L K G A + +M +GV +P
Sbjct: 269 VYTF-----------------------SILVDALCKDGNITRAKNMLAVMMKQGV-IP-- 302
Query: 409 DYNKFLHYYSNEEGVVMFEEVGK 431
+ Y S +G + EV K
Sbjct: 303 ---DVVTYSSLMDGYCLVNEVNK 322
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 79/175 (45%), Gaps = 2/175 (1%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVN 129
A +++T+N ++D + K I W+ + EM + D T+ + L + + K +
Sbjct: 371 APDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIA 430
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYC 188
+ D G + S+ N ++ LC+ + A+ + L + N Y +I G C
Sbjct: 431 LVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLC 490
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM 243
G EA + + M + G P + +I F+ +++++A K+ + M ++ +
Sbjct: 491 KEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRGL 545
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 166/365 (45%), Gaps = 21/365 (5%)
Query: 72 HNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKT-FKIALMTLAEVRELKKMVNF 130
H+ TFN ++ + K+ + ++EM L D+T F + E L +
Sbjct: 201 HDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRI 260
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCD 189
M + GC + +N ++ C++ + +A I + +SE +P++ Y L+ G C
Sbjct: 261 KEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCK 320
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
+G A ++ + M G +P I + +I K+ + +EA+K+ M V R
Sbjct: 321 IGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQM-VSRDCSPNAV 379
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
TY +I +CK ++ +A + + +GI D T +S+I GL + A + EE+
Sbjct: 380 TYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEM 439
Query: 310 E----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
+ +PD Y+ LI L R+ EA + +EM GC + Y L+ G +
Sbjct: 440 KGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRI 499
Query: 366 KGPDPL-------------VNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNK 412
+ + + V ++T+ + GL K+ + DAA+ +++++ G+ +F YN
Sbjct: 500 EEAEEIFDEMELQGVSRDSVTYNTL-IDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNS 558
Query: 413 FLHYY 417
L ++
Sbjct: 559 LLTHF 563
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 164/376 (43%), Gaps = 28/376 (7%)
Query: 61 QYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLA 119
Q + PC +T N +++ K ID +QE D+ T+ + L
Sbjct: 263 QMVEYGCPC---TDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLC 319
Query: 120 EVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEI 178
++ K + M G + + N ++ LC+ + EA K L +S PN +
Sbjct: 320 KIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAV 379
Query: 179 AYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
Y +I C + EA++I L+T +G P + + +I+ + AM +F+ M
Sbjct: 380 TYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEM 439
Query: 239 RVK--RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR 296
+ K R D+ TY ++ID +C K+ +A +L+EM G + + +++I G
Sbjct: 440 KGKGCRPDEF---TYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKN 496
Query: 297 GRLREAYKVVEEIEKPDIS----LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
R+ EA ++ +E+E +S Y+ LI GL + +R +A Q+ +MI G P TY
Sbjct: 497 KRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTY 556
Query: 353 IMLLQGHLGKRG-------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVM 399
LL H K G G +P + + GL KAG+ A++ + +
Sbjct: 557 NSLLT-HFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQ 615
Query: 400 NRGVEVPRFDYNKFLH 415
+G+ + YN +
Sbjct: 616 MKGMVLTPHAYNPVIQ 631
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 133/290 (45%), Gaps = 8/290 (2%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIM 134
TFN ++ + S N + +EM G+ ++ T+ + + +L R+L++ +N M
Sbjct: 415 TFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEM 474
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDL 193
GC ++ + N ++ C+ K + EA+ + ++ + + + + Y LI G C +
Sbjct: 475 ELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRV 534
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
+A+++ + M EG P + ++ F K +A + Q M + + TY
Sbjct: 535 EDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNP-DIVTYAT 593
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI---- 309
+I +CK G++ A +L + +G+ + +I L R R EA ++ E+
Sbjct: 594 LISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKS 653
Query: 310 EKPDISLYHGLIKGLLRLRRA-REATQVFREMIKRGCEPTMHTYIMLLQG 358
E PD Y + +GL EA EMI+RG P +++ML +G
Sbjct: 654 EPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEG 703
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 126/256 (49%), Gaps = 12/256 (4%)
Query: 111 FKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS 170
+ + L L + +LK + + M + + N ++K LC+ V A ++ ++
Sbjct: 171 YNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMP 230
Query: 171 EW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDV-VDKMIETFFKINKD 228
+ + P+E + +++GY + G+L A +I M + G P DV V+ +I F K +
Sbjct: 231 SYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGC-PCTDVTVNVLINGFCKQGRI 289
Query: 229 DEAMKVFQMMRVK--RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTL 286
D+A+ Q + R D TY +++ +CK G A +++ M G++ D T
Sbjct: 290 DQALSFIQEAVSEGFRPDQF---TYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTY 346
Query: 287 SSIIYGLLARGRLREAYKVVEEIEKPDIS----LYHGLIKGLLRLRRAREATQVFREMIK 342
+S+I GL G + EA K+++++ D S Y+ +I L + R EAT++ R +
Sbjct: 347 NSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTS 406
Query: 343 RGCEPTMHTYIMLLQG 358
+G P + T+ L+QG
Sbjct: 407 KGILPDVCTFNSLIQG 422
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 152/353 (43%), Gaps = 23/353 (6%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHIM 134
T+N ++ + K I+ + L +M R N T+ + +L + + + ++
Sbjct: 345 TYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLL 404
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDL 193
G + N +++ LC A L ++ + +P+E Y LI C L
Sbjct: 405 TSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKL 464
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
EA + M G ++ + + +I+ F K + +EA ++F M ++ + + TY
Sbjct: 465 EEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSV-TYNT 523
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK-- 311
+ID +CK ++ A ++++M G+ D T +S++ G +++A +V+ +
Sbjct: 524 LIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSG 583
Query: 312 --PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR---- 365
PDI Y LI GL + R + A+++ R + +G T H Y ++Q L KR R
Sbjct: 584 CNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQA-LFKRNRTHEA 642
Query: 366 ----------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRF 408
P + + ++ G G +A + ++ RG +P F
Sbjct: 643 MRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERG-NIPEF 694
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 158/381 (41%), Gaps = 35/381 (9%)
Query: 60 FQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTL 118
F + K QP F +S + ++ +GK+ + + L+EM D+ F I + +
Sbjct: 84 FNWASK-QPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIFVESY 142
Query: 119 AEVRELKKMVNFFHIMNDCGCEYSLE--------MLNKVVKTLCQRKLVVEAKYLILKLS 170
+ ++V +M D EY ++ +LN +V + KLV A +++
Sbjct: 143 GKFELYDEVVGIVKVMED---EYRIKPDTRFYNVLLNVLVDA-NKLKLVESAHSSMVR-- 196
Query: 171 EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDE 230
I+ + + LIK C + A + M G P +++ + + D
Sbjct: 197 RRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDG 256
Query: 231 AMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
A+++ + M V+ T ++I+ CK+G+I QA + ++E G D T ++++
Sbjct: 257 ALRIKEQM-VEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLV 315
Query: 291 YGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
GL G + A +VV+ + PDI Y+ LI GL +L EA ++ +M+ R C
Sbjct: 316 NGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCS 375
Query: 347 PTMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAK 393
P TY ++ L K R KG P V + GL + A
Sbjct: 376 PNAVTYNAIISS-LCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMD 434
Query: 394 YVERVMNRGVEVPRFDYNKFL 414
E + +G F YN +
Sbjct: 435 LFEEMKGKGCRPDEFTYNMLI 455
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 112/267 (41%), Gaps = 39/267 (14%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVN 129
+ +S+T+N ++D + KS+ ++ + + +M L DK T+ L + ++KK +
Sbjct: 515 SRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAAD 574
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCD 189
M GC P+ + Y LI G C
Sbjct: 575 IVQTMTSSGC----------------------------------NPDIVTYATLISGLCK 600
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
G + AS++ + +G + + +I+ FK N+ EAM++F+ M + + +
Sbjct: 601 AGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREM-LDKSEPPDAI 659
Query: 250 TYRIVIDWMCK-RGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY+IV +C G I +A EM +RG + + + GL K+V+
Sbjct: 660 TYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLSMDDTLVKLVDM 719
Query: 309 I-EKPDISLYH-GLIKGLLRLRRAREA 333
I EK S I+G L++R+ ++A
Sbjct: 720 IMEKAKFSEREISTIRGFLKIRKFQDA 746
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/149 (20%), Positives = 62/149 (41%), Gaps = 23/149 (15%)
Query: 279 IEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFR 338
++A+ L L + + R R+R D+S ++ LIK L + + R A +
Sbjct: 179 VDANKLKLVESAHSSMVRRRIRH-----------DVSTFNILIKALCKAHQVRPAILMME 227
Query: 339 EMIKRGCEPTMHTYIMLLQGHLGKRGRKGP----DPLVNFD--------TIFVGGLVKAG 386
EM G P T+ ++QG++ G + +V + + + G K G
Sbjct: 228 EMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQG 287
Query: 387 KSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
+ A +++ ++ G +F YN ++
Sbjct: 288 RIDQALSFIQEAVSEGFRPDQFTYNTLVN 316
>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Brachypodium distachyon]
Length = 554
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 144/301 (47%), Gaps = 20/301 (6%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N ++ +C+ + + L ++S+ +KP+ YG LIKG+C G + A K++N M D
Sbjct: 224 NTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRD 283
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR-MDDLGLSTYRIVIDWMCKRGKI 264
G P+ V +I+ K + M ++Q MRV+ M D L Y +++ +C+ +
Sbjct: 284 TGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPD--LVAYNALVNGLCRARNL 341
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISL----YHGL 320
A +++EEM G++ D +T +++I G G+L A + +++ + ++SL Y L
Sbjct: 342 KAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTAL 401
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------------LGKRGRKGP 368
I GL + R +A +V REM++ EP TY M++ L + KG
Sbjct: 402 ISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGK 461
Query: 369 DPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEE 428
P V + + GL K G+ +A + ++N GV YN L V EE
Sbjct: 462 KPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEE 521
Query: 429 V 429
+
Sbjct: 522 L 522
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 135/331 (40%), Gaps = 58/331 (17%)
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYC 188
F+ + D G + N +++ + +V A+ + ++ ++P + + LI G C
Sbjct: 172 TFYLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMRRSVQPTVVTFNTLISGMC 231
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
DL ++ M+D G +P + +I+ F + + + A+K+F MR D G+
Sbjct: 232 RARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMR-----DTGV 286
Query: 249 STYRIV----IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK 304
+ +V ID CK G ++ + ++M RG+
Sbjct: 287 NPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGV------------------------- 321
Query: 305 VVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
PD+ Y+ L+ GL R R + A + EM G +P TY L+ G K G
Sbjct: 322 ------MPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCC-KDG 374
Query: 365 R---------KGPDPLVNFD----TIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
+ K + V+ D T + GL KAG+ +DA + + +M +E Y
Sbjct: 375 KLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYT 434
Query: 412 KFLHYYSN----EEGVVMFEEVGKKLREVGL 438
+ + + G + +E+ K ++ G+
Sbjct: 435 MVIDAFCRKGDVKTGFKLLKEMQNKGKKPGV 465
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 119/266 (44%), Gaps = 12/266 (4%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVNFF 131
N++ F ++D K N++ + Q+M R ++ D AL+ L R LK +
Sbjct: 289 NAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIV 348
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
M + G + ++ C+ + A + K++E + +E+ Y LI G
Sbjct: 349 EEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKA 408
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G ++A ++ M + EP +I+ F + K+ + M+ K G+ T
Sbjct: 409 GRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKP-GVVT 467
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y ++++ +CK G++ A +L M G+ D++T + ++ G G++ + EE+E
Sbjct: 468 YNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANS----EELE 523
Query: 311 K-----PDISLYHGLIKGLLRLRRAR 331
PD ++Y LI L + + A+
Sbjct: 524 SSKGMVPDFAVYTSLISELAKKKPAK 549
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 170/362 (46%), Gaps = 23/362 (6%)
Query: 70 FAHNSITFNRMVD---IIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKK 126
FA + IT+ ++ IG + N + ++E G + V + + +L + R +
Sbjct: 172 FAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDV--VAYNTVIDSLCKDRRANE 229
Query: 127 MVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIK 185
+ FF M D G ++ + ++ C + EA L ++ + PN + + L+
Sbjct: 230 AMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVD 289
Query: 186 GYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD 245
G C G ++EA +++ +MT+ G EP +++ + ++ DEA K+F +M K
Sbjct: 290 GLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAP 349
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
+ Y I+I+ CK ++++A T+L EM+ R + D +T S+++ G GR + A K+
Sbjct: 350 -SVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKL 408
Query: 306 VEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG--H 359
+E+ PD Y L+ GL + EA ++ + M + EP + Y +L+QG +
Sbjct: 409 FKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCN 468
Query: 360 LGKRGR----------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFD 409
GK KG P V T+ + GL+K G S +A + +++ G
Sbjct: 469 FGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCT 528
Query: 410 YN 411
YN
Sbjct: 529 YN 530
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 163/393 (41%), Gaps = 65/393 (16%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHI 133
+ +N ++D + K R + EM + + N T+ L + +L + + F
Sbjct: 212 VAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQ 271
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M + +V LC+ +++EA+ + ++E ++P+ Y L+ GYC
Sbjct: 272 MIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQ 331
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ EA K++++M +GF PS+ V + +I K + +EA + M + + TY
Sbjct: 332 MDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTP-DTVTYS 390
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
++ C+ G+ A + +EM G+ D++T S ++ GL G L EA+++++ ++
Sbjct: 391 TLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQES 450
Query: 311 -------------------------------------KPDISLYHGLIKGLLRLRRAREA 333
+P + Y +I GLL+ + EA
Sbjct: 451 KIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEA 510
Query: 334 TQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAK 393
++FR+M+ GC P TY + +QG L + G +A +
Sbjct: 511 CEMFRKMVVNGCLPNSCTYNVAIQGFL-----------------------RNGDPSNAVR 547
Query: 394 YVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMF 426
+E ++ RG + L SN+E + F
Sbjct: 548 LIEEMVGRGFSADSSTFQMLLDLESNDEIISRF 580
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 118/254 (46%), Gaps = 6/254 (2%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
TF L L ++ V F + G SL ++K LC+ A L+ K+
Sbjct: 143 TFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKM 202
Query: 170 SE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
E KP+ +AY +I C EA ++ M D+G P++ ++ F + +
Sbjct: 203 EEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQL 262
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
+EA +F+ M + R T+ I++D +CK G I +A + E M + G+E D T S+
Sbjct: 263 NEATSLFKQM-IGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSA 321
Query: 289 IIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
++ G + ++ EA K+ + + P + +Y+ LI G + RR EA + EM R
Sbjct: 322 LMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRD 381
Query: 345 CEPTMHTYIMLLQG 358
P TY L+QG
Sbjct: 382 LTPDTVTYSTLMQG 395
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 131/286 (45%), Gaps = 25/286 (8%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
++P + +G L+ G C +I+A K+++ + GF PS+ +I+ KI A+
Sbjct: 137 LQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNAL 196
Query: 233 KVFQMMRVKRMDDLG----LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
++ +K+M++ G + Y VID +CK + ++A EM +GI + +T SS
Sbjct: 197 QL-----LKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSS 251
Query: 289 IIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
I++G G+L EA + +++ P+ + L+ GL + EA +VF M + G
Sbjct: 252 ILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENG 311
Query: 345 CEPTMHTYIMLLQGHLGKRGR------------KGPDPLVNFDTIFVGGLVKAGKSLDAA 392
EP +TY L+ G+ + KG P V I + G K+ + +A
Sbjct: 312 VEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAK 371
Query: 393 KYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
+ + +R + Y+ + + + +++ K++ GL
Sbjct: 372 TLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGL 417
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 126/299 (42%), Gaps = 56/299 (18%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
I P+ I G Y ++ + +A +N + P + V +K++ + K +
Sbjct: 30 ISPSSITNGGFCSNYNNLHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVI 89
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMC--KRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
+ + M + + + T I+I+ +C R + A++ L +MFK G++ ++T +++
Sbjct: 90 SLCKQMDLSNIRP-NVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLL 148
Query: 291 YGLLARGRLREAYKVVEEIE---------------------------------------K 311
GL ++ ++ +A K+ +EI K
Sbjct: 149 NGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCK 208
Query: 312 PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG--HLGKR------ 363
PD+ Y+ +I L + RRA EA F EM+ +G P + TY +L G +LG+
Sbjct: 209 PDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSL 268
Query: 364 -----GRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
GR V F TI V GL K G L+A + E + GVE + Y+ + Y
Sbjct: 269 FKQMIGRNVMPNTVTF-TILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGY 326
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 172/372 (46%), Gaps = 26/372 (6%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVN 129
A + +N +++ + K +D MG + L ND T+ I + + + +L ++
Sbjct: 352 APSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALH 411
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYC 188
F M + G + ++ + ++ C+ + AK L ++ + +KPN + Y LI GYC
Sbjct: 412 FLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYC 471
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
G+L A ++++ MT +G P+ +I N+ EA K+F M V+
Sbjct: 472 KEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEM-VEWNVIPNE 530
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY ++I+ CK G +A+ +L+EM ++G+ D T +I GL + GR+ EA + + +
Sbjct: 531 VTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMND 590
Query: 309 IEK------------PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
++ P++ Y LI GL ++ +A + REM+ P +TY L
Sbjct: 591 LQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFL 650
Query: 357 -----QGHLGKRGRKGPDPLVNF------DTIFVGGLVKAGKSLDAAKYVERVMNRGVEV 405
+G++ K + L F I + G K G+ +AA+ + +++ G+
Sbjct: 651 DYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISP 710
Query: 406 PRFDYNKFLHYY 417
Y+ ++ Y
Sbjct: 711 DCISYSTIIYEY 722
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 148/347 (42%), Gaps = 22/347 (6%)
Query: 111 FKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS 170
+ + +L E+++ + M GC+ S+ N ++ LC+ + V EA + LS
Sbjct: 218 YTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLS 277
Query: 171 -EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD 229
+ ++ + Y L+ G C V + ++ N M + GF PS V +++ K
Sbjct: 278 YKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIG 337
Query: 230 EAMKVFQMMRVKRMD-DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
A + +VK+ L Y +I+ MCK GK+ +A ++ M +G+ +++T S
Sbjct: 338 SAFDLVN--KVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSI 395
Query: 289 IIYGLLARGRLREAY----KVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+I RG+L A K+ E K + Y LI G +L + R A +F EMI G
Sbjct: 396 LIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANG 455
Query: 345 CEPTMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDA 391
+P + Y L+ G+ K G KG P T + GL A + +A
Sbjct: 456 LKPNVVIYTSLISGYC-KEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEA 514
Query: 392 AKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
K ++ V YN + + E V E+ ++ E GL
Sbjct: 515 NKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGL 561
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 137/316 (43%), Gaps = 23/316 (7%)
Query: 123 ELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYG 181
EL +H M G + ++ LC + EA L ++ EW + PNE+ Y
Sbjct: 475 ELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYN 534
Query: 182 WLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR-- 239
LI+G+C G+ + A ++ + M ++G P +I + EA + ++
Sbjct: 535 VLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGE 594
Query: 240 VKRMDDL-----GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
++++++ + TY +I+ +CK G + +A + EM + T + + L
Sbjct: 595 QQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLT 654
Query: 295 ARGRLREA---YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
+ G + +A + V+ E + Y+ LI+G +L R +EA +V MI G P +
Sbjct: 655 SEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCIS 714
Query: 352 YIMLLQGHLGKRGRKGPDPL--------VNFDTI----FVGGLVKAGKSLDAAKYVERVM 399
Y ++ + + K L VN DT+ + G G+ A + + +M
Sbjct: 715 YSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMM 774
Query: 400 NRGVEVPRFDYNKFLH 415
RGV+ R YN +H
Sbjct: 775 RRGVKPNRATYNSLIH 790
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 126/291 (43%), Gaps = 33/291 (11%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N +T+N +++ K N +E L EM + LV D T++ + L + + F
Sbjct: 529 NEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREF- 587
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVG 191
MND E + LN++ E PN + Y LI G C +G
Sbjct: 588 --MNDLQGEQ--QKLNEI---------------------EGCLPNVVTYTALINGLCKIG 622
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTY 251
+ +A + M P+ + ++ ++A+++ ++ + + TY
Sbjct: 623 LMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANT--VTY 680
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI-- 309
I+I CK G+I +A +L M GI D ++ S+IIY RG L+EA K+ E +
Sbjct: 681 NILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLN 740
Query: 310 --EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
PD Y+ LI G +A ++ +M++RG +P TY L+ G
Sbjct: 741 RGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHG 791
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 138/317 (43%), Gaps = 21/317 (6%)
Query: 122 RELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAY 180
REL +V +M DCG + L+ V+ L + + A +L ++ S ++P+ Y
Sbjct: 160 RELDGLV-VVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVY 218
Query: 181 GWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
+++ C++ D I A ++ M G + S+ + I K + EA+++ ++
Sbjct: 219 TAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSY 278
Query: 241 KRM-DDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
K + D+G TY ++ +CK + M+ EM + G +S+++ GL +G +
Sbjct: 279 KGLRADVG--TYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNI 336
Query: 300 REAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
A+ +V +++K P + +Y+ LI + + + EA +F M +G P TY +L
Sbjct: 337 GSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSIL 396
Query: 356 LQG------------HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
+ LGK G V + + G K GK A + ++ G+
Sbjct: 397 IDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGL 456
Query: 404 EVPRFDYNKFLHYYSNE 420
+ Y + Y E
Sbjct: 457 KPNVVIYTSLISGYCKE 473
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 65/158 (41%), Gaps = 19/158 (12%)
Query: 312 PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------------ 359
P I G++ GL+R+R+ R A +F E++ G P ++ Y +++
Sbjct: 178 PQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREV 237
Query: 360 LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL----- 414
+G+ G D V +F+ GL K + +A + + +G+ Y +
Sbjct: 238 IGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCK 297
Query: 415 --HYYSNEEGVVMFEEVGKKLREVGLADLADIFQRYGK 450
+ + EE + E G E +++L D ++ G
Sbjct: 298 VEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGN 335
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 169/353 (47%), Gaps = 20/353 (5%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVNFF 131
N + +N ++D + K + ++ ++ EM + + D AL++ + +L ++ F
Sbjct: 224 NVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLF 283
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDV 190
+ M + + N +V C+ + E K + + + + IKPN + Y L+ GYC V
Sbjct: 284 NKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLV 343
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
++ +A I+N M G P I MI F KI K DEAM +F+ M K + + T
Sbjct: 344 KEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIP-DVVT 402
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y +ID + K G+IS A ++++M RG+ T +SI+ L ++ +A ++ +++
Sbjct: 403 YSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLK 462
Query: 311 ----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------- 359
+P++ Y LIKGL + + +A +VF ++ +G + TY +++QG
Sbjct: 463 DKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFN 522
Query: 360 -----LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPR 407
L K G P I + L K ++ A K + ++ RGV PR
Sbjct: 523 EALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVR-PR 574
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 187/410 (45%), Gaps = 32/410 (7%)
Query: 13 TILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAH 72
T+LY Q + +L +CN + N F + F + + + +
Sbjct: 103 TVLYLSQKMEFRGIKPNLVNCNI---------LINCFCQLGLIPFAFSVFAKILKMGYVP 153
Query: 73 NSITFNRMVD---IIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
++ITF ++ + G+ + LF + + +G + ++ + L +V E + ++
Sbjct: 154 DTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFH--FDQISYGTLIHGLCKVGETRAALD 211
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYC 188
++ + ++ M N ++ ++C+ KLV EA L ++ S+ I P+ + Y LI G+C
Sbjct: 212 LLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFC 271
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
+G L +A ++N M E +P + + ++ F K K E VF MM +K+
Sbjct: 272 ILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMM-MKQGIKPNF 330
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY ++D C ++++A ++ M + G+ D + S +I G + EA + +E
Sbjct: 331 VTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKE 390
Query: 309 IEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG----H- 359
+ + PD+ Y LI GL + R A Q+ +M RG PT+ TY +L H
Sbjct: 391 MHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQ 450
Query: 360 -------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
L K KG P + +I + GL ++GK DA K E ++ +G
Sbjct: 451 VDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKG 500
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 123/256 (48%), Gaps = 19/256 (7%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
++PN + Y +I C V + EA +++ M +G P + +I F + K ++A+
Sbjct: 221 VQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAI 280
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
+F M ++ + + T+ I+++ CK GK+ + T+ + M K+GI+ + +T +S++ G
Sbjct: 281 DLFNKMILENIKP-DVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDG 339
Query: 293 LLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
+ +A + + + PDI Y +I G ++++ EA +F+EM ++ P
Sbjct: 340 YCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPD 399
Query: 349 MHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYV 395
+ TY L+ G L K GR +G P + + L K + A +
Sbjct: 400 VVTYSSLIDG-LSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALL 458
Query: 396 ERVMNRGVEVPRFDYN 411
++ ++G++ + Y+
Sbjct: 459 TKLKDKGIQPNMYTYS 474
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 116/255 (45%), Gaps = 17/255 (6%)
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
++I+YG LI G C VG+ A + + +P++ + + +I++ K+ +EA +F
Sbjct: 189 DQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLF 248
Query: 236 QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
M K + + TY +I C GK++ A + +M I+ D T + ++
Sbjct: 249 SEMISKGISP-DVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCK 307
Query: 296 RGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
G+++E V + + KP+ Y+ L+ G ++ +A +F M + G P + +
Sbjct: 308 DGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQS 367
Query: 352 YIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVM 399
Y +++ G + RK P V + + GL K+G+ A + V+++
Sbjct: 368 YSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMH 427
Query: 400 NRGVEVPRFDYNKFL 414
+RGV YN L
Sbjct: 428 DRGVPPTIRTYNSIL 442
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 126/303 (41%), Gaps = 59/303 (19%)
Query: 146 LNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
NK++ +L + K YL K+ IKPN + LI +C +G + A ++ +
Sbjct: 88 FNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKIL 147
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
G+ P D + T+ +I +C +G+I
Sbjct: 148 KMGYVP--DTI----------------------------------TFTTLIKGLCLKGQI 171
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGL 320
QA+ +++ G D ++ ++I+GL G R A +++ ++ +P++ +Y+ +
Sbjct: 172 QQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTI 231
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH--LGKRGR----------KGP 368
I + +++ EA +F EMI +G P + TY L+ G LGK +
Sbjct: 232 IDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENI 291
Query: 369 DPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEE 428
P V I V K GK + + +M +G++ F+ Y S +G + +E
Sbjct: 292 KPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIK------PNFVTYNSLMDGYCLVKE 345
Query: 429 VGK 431
V K
Sbjct: 346 VNK 348
>gi|224068054|ref|XP_002302657.1| predicted protein [Populus trichocarpa]
gi|222844383|gb|EEE81930.1| predicted protein [Populus trichocarpa]
Length = 602
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 166/370 (44%), Gaps = 20/370 (5%)
Query: 56 VYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRR--LVNDKTFKI 113
Y FF + K QPC+ H + M+ ++ K + W L+EM R L+ + F +
Sbjct: 98 AYKFFVWASK-QPCYRHCYENYKAMIKVLSKMKQFGAVWALLEEMRRDNSVLITSEVFVV 156
Query: 114 ALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWI 173
+ A R + K + M GCE + ++ LC+ V EA L +
Sbjct: 157 VMRRFASSRMVNKAIEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVRF 216
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
P+ + L+ G+C G L+EA + M + GFEP I V + ++ + K +A
Sbjct: 217 SPSLKHFTCLLYGWCKEGKLLEAKHVLVQMREAGFEPDIVVYNNLLSGYATAGKMGDAFD 276
Query: 234 VFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
+ + +R K D ++Y I+I +C + K+ +A + EM + G +AD +T ++++ G
Sbjct: 277 LLKEIRRKGCDP-NATSYTILIQALCGQEKMDEAMRVFVEMERSGCDADVVTYTALVSGF 335
Query: 294 LARGRLREAYKVVEE-IEK---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
+ + Y++++ I+K P+ Y L+ + E ++ EM K GC P +
Sbjct: 336 CKWRMIDKGYQILQSMIQKGHMPNQLTYLHLMLAHEKKEELEECKELMGEMQKIGCIPDL 395
Query: 350 HTY--IMLLQGHLGKRGR----------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVER 397
Y ++ L LG+ G P ++ I + G + G ++A +Y +
Sbjct: 396 SIYNVVIRLACKLGEVNAGVDAWNEMEVSGLSPGLDTFVIMINGFLGHGYLVEACQYFKE 455
Query: 398 VMNRGVEVPR 407
++ RG+ R
Sbjct: 456 MVERGLLSSR 465
>gi|356570295|ref|XP_003553325.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Glycine max]
Length = 516
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 185/415 (44%), Gaps = 31/415 (7%)
Query: 11 VCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCF 70
+ I+++ P S+ L C+ +L+ + +++ W + FF + K QP +
Sbjct: 35 ILDIMHEMGSGP-SQTKQKLEHCSVDLSAKLVVEVLLRTRNDWEAAFTFFLWAGK-QPGY 92
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRR----LVNDKTFKIALMTLAEVRELKK 126
AH+ ++ M+ I+GK R D W ++EM R R LV +T I + V ++ +
Sbjct: 93 AHSIREYHSMISILGKMRKFDTAWNLIEEMRRGRTGPSLVTPQTLLIMIRKYCAVHDVAR 152
Query: 127 MVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKG 186
+N F+ + LE + ++ LC+ K V +A++L+ + ++ ++ G
Sbjct: 153 AINTFYAYKQFNFQVGLEEFHSLLSALCRYKNVQDAEHLLFCNKNLFPLDTKSFNIILNG 212
Query: 187 YCD-VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD 245
+C+ + A +IW+ M+ + + +I + K +K + +++F M+ KR
Sbjct: 213 WCNLIVSTSHAERIWHEMSKRRIQHDVVSYGSIISCYSKSSKLYKVLRMFDEMK-KRKIT 271
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
Y VI + K + +A ++ + + + +T +S+I L G++ EA ++
Sbjct: 272 PDRKVYNAVIYALAKGRLVKEAVNLIGTLEDNDVTPNVVTYNSLIKPLCKAGKVDEAKQL 331
Query: 306 VEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG 361
EI K P I +H + LR E ++ +M + GC PT+ TYIML++
Sbjct: 332 FYEILKRHLSPTIQTFHAFFRI---LRTKEEVFELLDKMKELGCYPTIETYIMLMRKFC- 387
Query: 362 KRGRKGPDPLVNFDT--------------IFVGGLVKAGKSLDAAKYVERVMNRG 402
R R+ D +D + + GL GK +A Y + +G
Sbjct: 388 -RWRQLDDVFKMWDAMREDGIGHDRSSYIVLIHGLFLNGKLEEAHTYYAEMQEKG 441
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 154/345 (44%), Gaps = 25/345 (7%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQ-RKLVVEAKYLILK 168
TF L ++A++ + + +ND G + L LN ++ C R +
Sbjct: 948 TFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGF 1007
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
L +P+ + L+KG + +A ++++ MT +G +I K K
Sbjct: 1008 LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKT 1067
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
A+K+ + M+ D+ TY ++ID +CK G ++A M EM GI D + SS
Sbjct: 1068 GLAIKLHEKMKGNCKGDV--FTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSS 1125
Query: 289 IIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
++ GL GRL+EA + +E+E D+ Y+ LI GL R +E T M+ RG
Sbjct: 1126 LMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRG 1185
Query: 345 CEPTMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDA 391
P T+ +L+ G L K G+ KG +P + + GL G+ DA
Sbjct: 1186 FSPDAFTFTILIDG-LCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDA 1244
Query: 392 AKYVERVMNRGVEVPRFDYNKFLHYYSN----EEGVVMFEEVGKK 432
K E + +RG+++ F YN ++ Y +E FEE+ K
Sbjct: 1245 TKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPK 1289
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 152/351 (43%), Gaps = 30/351 (8%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVNFFHIM 134
T+ ++D + K + EM ++ D +LM L LK+ + FF M
Sbjct: 1087 TYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEM 1146
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGDL 193
G + N ++ L + L E + + L + P+ + LI G C G +
Sbjct: 1147 EGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKV 1206
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
EA +I LM +G EP I + ++ + + ++A K+F+ + R L + +Y I
Sbjct: 1207 GEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESL-ADRGIKLNVFSYNI 1265
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPD 313
+I+ CK KI +A+ EEM +G++ +T +++I L GR+R A K+ E++
Sbjct: 1266 LINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCG 1325
Query: 314 ----ISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPD 369
+S Y L+ GL + EA +F+ + K +P + + +LL G
Sbjct: 1326 QFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDG----------- 1374
Query: 370 PLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE 420
+ +AGK +A K + + G+E YN ++ N+
Sbjct: 1375 ------------MCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNK 1413
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 139/293 (47%), Gaps = 7/293 (2%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMV 128
F+ ++ TF ++D + K + + L+ M + D T+ + L V +L+
Sbjct: 1186 FSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDAT 1245
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGY 187
F + D G + ++ N ++ C+ + + EA ++ + +KP+ + Y LI
Sbjct: 1246 KLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGAL 1305
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C G + A K++ M G + +++ K +EAM +FQ ++ K
Sbjct: 1306 CQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIK-KTEHKPN 1364
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
+ + I++D MC+ GK+ +A+ +E+ K G+E D + + +I GL +G L EA K++
Sbjct: 1365 IEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLW 1424
Query: 308 EIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
++E+ PD ++ +I+ LL+ EA Q+ EM R P MLL
Sbjct: 1425 QMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 1477
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 139/294 (47%), Gaps = 7/294 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHI 133
+ ++ ++D + + + E +EM R + D T+ + L+ K++ F ++
Sbjct: 1121 VVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNL 1180
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGD 192
M D G ++ LC+ V EA+ ++ L + +P+ + Y L+ G C VG
Sbjct: 1181 MVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQ 1240
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
L +A+K++ + D G + ++ + +I + K K DEA + F+ MR K + TY
Sbjct: 1241 LEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKP-STVTYN 1299
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK- 311
+I +C+ G++ A + EM G T ++ GL G L EA + + I+K
Sbjct: 1300 TLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKT 1359
Query: 312 ---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
P+I ++ L+ G+ R + EA + F E+ K G EP Y +L+ G K
Sbjct: 1360 EHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNK 1413
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 166/378 (43%), Gaps = 25/378 (6%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHI 133
I FNR+ I K++ +L ++M + + + T I + R+L +
Sbjct: 89 IDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGK 148
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGD 192
+ G E + N ++ LC V EA L+ ++ E KP I L+ G C G
Sbjct: 149 IMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGK 208
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ +A + + M + GF+P+ ++ K + AM++ + M +R L Y
Sbjct: 209 VSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKME-ERNIKLDAVKYS 267
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK- 311
I+ID +CK G + A+ + EM +G +AD +T +++I G GR + K++ ++ K
Sbjct: 268 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 312 ---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR--- 365
P++ + LI ++ + REA Q+ +EM++RG P TY L+ G K R
Sbjct: 328 KISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFC-KENRLEE 386
Query: 366 ----------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
KG DP + I + G KA + D + + RGV YN +
Sbjct: 387 AIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQ 446
Query: 416 YYSNEEGVVMFEEVGKKL 433
+ + EV KKL
Sbjct: 447 GFCQSGKL----EVAKKL 460
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 140/295 (47%), Gaps = 7/295 (2%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKT-FKIALMTLAEVRELKKMV 128
F N +T+ +++++ KS L E L++M R + D + I + L + L
Sbjct: 224 FQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAF 283
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQR-KLVVEAKYLILKLSEWIKPNEIAYGWLIKGY 187
N F+ M G + + N ++ C + AK L + I PN + + LI +
Sbjct: 284 NLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSF 343
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
G L EA ++ M G P+ + +I+ F K N+ +EA+++ +M + + D
Sbjct: 344 VKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLM-ISKGCDPD 402
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
+ T+ I+I+ CK +I + EM RG+ A+ +T ++++ G G+L A K+ +
Sbjct: 403 IMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQ 462
Query: 308 EI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
E+ +PDI Y L+ GL +A ++F ++ K E + Y++++ G
Sbjct: 463 EMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHG 517
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 125/278 (44%), Gaps = 3/278 (1%)
Query: 67 QPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELK 125
Q A N+IT+N ++D K ++ + + M + D TF I + + +
Sbjct: 361 QRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRID 420
Query: 126 KMVNFFHIMNDCGCEYSLEMLNKVVKTLCQR-KLVVEAKYLILKLSEWIKPNEIAYGWLI 184
+ F M+ G + N +V+ CQ KL V K +S ++P+ ++Y L+
Sbjct: 421 DGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILL 480
Query: 185 KGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD 244
G CD G+L +A +I+ + E I + +I +K D+A +F + +K +
Sbjct: 481 DGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGV- 539
Query: 245 DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK 304
L Y I+I +C++ +S+A + +M + G D LT + +I L A +
Sbjct: 540 KLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAE 599
Query: 305 VVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIK 342
++EE++ +K ++ + + E + F +M+
Sbjct: 600 LIEEMKSSGFPADVSTVKMVINMLSSGELDKSFLDMLS 637
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 106/237 (44%), Gaps = 27/237 (11%)
Query: 241 KRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR 296
K+M+ G++ T I+I+ C+ K+S A++ + ++ K G E D + ++++ GL
Sbjct: 112 KQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLE 171
Query: 297 GRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
R+ EA ++V+ + KP + + L+ GL + +A + M++ G +P TY
Sbjct: 172 CRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTY 231
Query: 353 -----IMLLQGHLG---KRGRKGPDPLVNFD----TIFVGGLVKAGKSLDAAKYVERVMN 400
+M G + RK + + D +I + GL K G +A +
Sbjct: 232 GPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 291
Query: 401 RGVEVPRFDYNKFLHYYSN----EEGVVMFEEVGKK---LREVGLADLADIFQRYGK 450
+G + YN + + N ++G + ++ K+ V + L D F + GK
Sbjct: 292 KGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGK 348
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/288 (19%), Positives = 122/288 (42%), Gaps = 41/288 (14%)
Query: 165 LILKLSEWIKPNEIAYGW-----LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMI 219
L+L L + ++ IA+ +I +C L A + G+EP + + ++
Sbjct: 106 LVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLL 165
Query: 220 ETFFKINKDDEAMKVFQMMRVKRMDDLG----LSTYRIVIDWMCKRGKISQAYTMLEEMF 275
+ EA+++ V RM ++G L T +++ +C GK+S A +++ M
Sbjct: 166 NGLCLECRVSEALEL-----VDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMV 220
Query: 276 KRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISL----YHGLIKGLLRLRRAR 331
+ G + + +T ++ + G+ A +++ ++E+ +I L Y +I GL +
Sbjct: 221 ETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLD 280
Query: 332 EATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDA 391
A +F EM +G + + TY +GG AG+ D
Sbjct: 281 NAFNLFNEMEIKGFKADIITY-----------------------NTLIGGFCNAGRWDDG 317
Query: 392 AKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLA 439
AK + ++ R + ++ + + E + +++ K++ + G+A
Sbjct: 318 AKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365
>gi|356541430|ref|XP_003539180.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 492
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 175/379 (46%), Gaps = 22/379 (5%)
Query: 58 LFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALM 116
LFF++ + P + H+ +F+ VDI + R+ + W + M RL + KT I
Sbjct: 85 LFFKHLDRHLPSYTHSPSSFDHAVDIAARMRDFNSAWALVGRMRSLRLGPSPKTLAILAE 144
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPN 176
A + + + V F M++ G L N ++ LC+ V A L+ L +P+
Sbjct: 145 RYASIGKPHRAVRTFLSMHEHGLHQDLHSFNTLLDILCKSNRVETAHDLLRTLKSRFRPD 204
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
++Y L GYC A ++ M G EP++ + M++ +F+ N+ EA + +
Sbjct: 205 TVSYNILANGYCLKKRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYL 264
Query: 237 MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR 296
M+ KR ++ + +Y VI + G++ +A + +EM K G+ + T +++I +
Sbjct: 265 EMK-KRKCEIDVVSYTTVIHGFGEAGEVKKAKRVFDEMVKEGVAPNVATYNALIQVFCKK 323
Query: 297 GRLREAYKVVEEIEK-----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
++ A V EE+ + P++ ++ +I+GL + A M + G ++ T
Sbjct: 324 DSVQNAVAVFEEMVREGVCSPNVVTFNVVIRGLCHVGDMERALGFMERMGEHGLRASVQT 383
Query: 352 YIMLLQ-----GHLGKR----GRKGPD-PLVNFDT--IFVGGLVKAGKSLD---AAKYVE 396
Y ++++ G + K G+ G L N DT + + + KS D A K +
Sbjct: 384 YNVVIRYFCDAGEIEKGLEVFGKMGDGLCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLM 443
Query: 397 RVMNRGVEVPRFDYNKFLH 415
++ RG +F +N+ L+
Sbjct: 444 EMVERGFLPRKFTFNRVLN 462
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 142/298 (47%), Gaps = 22/298 (7%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIAL-------MTLAEVRELKKMV 128
+FN ++DI+ KS ++ + L+ + R + ++ I T +R LK+MV
Sbjct: 173 SFNTLLDILCKSNRVETAHDLLRTLKSRFRPDTVSYNILANGYCLKKRTPMALRVLKEMV 232
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGY 187
G E ++ N ++K + + EA L++ + + + ++Y +I G+
Sbjct: 233 QR-------GIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVSYTTVIHGF 285
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
+ G++ +A ++++ M EG P++ + +I+ F K + A+ VF+ M + +
Sbjct: 286 GEAGEVKKAKRVFDEMVKEGVAPNVATYNALIQVFCKKDSVQNAVAVFEEMVREGVCSPN 345
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
+ T+ +VI +C G + +A +E M + G+ A T + +I G + + +V
Sbjct: 346 VVTFNVVIRGLCHVGDMERALGFMERMGEHGLRASVQTYNVVIRYFCDAGEIEKGLEVFG 405
Query: 308 EIEK----PDISLYHGLIKGLLRLRRARE---ATQVFREMIKRGCEPTMHTYIMLLQG 358
++ P++ Y+ LI + +++ + A ++ EM++RG P T+ +L G
Sbjct: 406 KMGDGLCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLMEMVERGFLPRKFTFNRVLNG 463
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 129/284 (45%), Gaps = 27/284 (9%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
+ P+ L + Y +G A + + M + G + + +++ K N+ + A
Sbjct: 132 LGPSPKTLAILAERYASIGKPHRAVRTFLSMHEHGLHQDLHSFNTLLDILCKSNRVETAH 191
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
+ + ++ + D +Y I+ + C + + A +L+EM +RGIE +T ++++ G
Sbjct: 192 DLLRTLKSRFRPDT--VSYNILANGYCLKKRTPMALRVLKEMVQRGIEPTMVTYNTMLKG 249
Query: 293 LLARGRLREAYKVVEEIEKP----DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
+++EA++ E++K D+ Y +I G ++A +VF EM+K G P
Sbjct: 250 YFRSNQIKEAWEFYLEMKKRKCEIDVVSYTTVIHGFGEAGEVKKAKRVFDEMVKEGVAPN 309
Query: 349 MHTYIMLLQ---------------GHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAK 393
+ TY L+Q + + G P+ +V F+ + + GL G A
Sbjct: 310 VATYNALIQVFCKKDSVQNAVAVFEEMVREGVCSPN-VVTFNVV-IRGLCHVGDMERALG 367
Query: 394 YVERVMNRGVEVPRFDYNKFLHYYSN----EEGVVMFEEVGKKL 433
++ER+ G+ YN + Y+ + E+G+ +F ++G L
Sbjct: 368 FMERMGEHGLRASVQTYNVVIRYFCDAGEIEKGLEVFGKMGDGL 411
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 103/235 (43%), Gaps = 19/235 (8%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHI 133
+T+N M+ +S I WE EM +R+ ++ ++ + E E+KK F
Sbjct: 241 VTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVSYTTVIHGFGEAGEVKKAKRVFDE 300
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIK-----PNEIAYGWLIKGYC 188
M G ++ N +++ C++ V A + E ++ PN + + +I+G C
Sbjct: 301 MVKEGVAPNVATYNALIQVFCKKDSVQNA---VAVFEEMVREGVCSPNVVTFNVVIRGLC 357
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL-- 246
VGD+ A M + G S+ + +I F + ++ ++VF M D L
Sbjct: 358 HVGDMERALGFMERMGEHGLRASVQTYNVVIRYFCDAGEIEKGLEVFGKMG----DGLCL 413
Query: 247 -GLSTYRIVIDWMCKRGK---ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
L TY ++I M R K + A +L EM +RG T + ++ GL+ G
Sbjct: 414 PNLDTYNVLISAMFVRKKSEDLVVAGKLLMEMVERGFLPRKFTFNRVLNGLVITG 468
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 103/233 (44%), Gaps = 33/233 (14%)
Query: 229 DEAMKVFQMMR--------VKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFK 276
D A+ + MR V RM L L T I+ + GK +A M +
Sbjct: 105 DHAVDIAARMRDFNSAWALVGRMRSLRLGPSPKTLAILAERYASIGKPHRAVRTFLSMHE 164
Query: 277 RGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE---KPDISLYHGLIKGLLRLRRAREA 333
G+ D + ++++ L R+ A+ ++ ++ +PD Y+ L G +R A
Sbjct: 165 HGLHQDLHSFNTLLDILCKSNRVETAHDLLRTLKSRFRPDTVSYNILANGYCLKKRTPMA 224
Query: 334 TQVFREMIKRGCEPTMHTYIMLLQG-------------HLGKRGRKGPDPLVNFDTIFVG 380
+V +EM++RG EPTM TY +L+G +L + RK +V++ T+ +
Sbjct: 225 LRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVSYTTV-IH 283
Query: 381 GLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY----SNEEGVVMFEEV 429
G +AG+ A + + ++ GV YN + + S + V +FEE+
Sbjct: 284 GFGEAGEVKKAKRVFDEMVKEGVAPNVATYNALIQVFCKKDSVQNAVAVFEEM 336
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 72/173 (41%), Gaps = 6/173 (3%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV--NDKTFKIALMTLAEVRELKKMV 128
A N T+N ++ + K ++ +EM R + N TF + + L V ++++ +
Sbjct: 307 APNVATYNALIQVFCKKDSVQNAVAVFEEMVREGVCSPNVVTFNVVIRGLCHVGDMERAL 366
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWI-KPNEIAYGWLIKGY 187
F M + G S++ N V++ C + + + K+ + + PN Y LI
Sbjct: 367 GFMERMGEHGLRASVQTYNVVIRYFCDAGEIEKGLEVFGKMGDGLCLPNLDTYNVLISAM 426
Query: 188 C---DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQM 237
DL+ A K+ M + GF P ++++ D A + +M
Sbjct: 427 FVRKKSEDLVVAGKLLMEMVERGFLPRKFTFNRVLNGLVITGNQDFAKDILRM 479
>gi|356547370|ref|XP_003542086.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 628
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 170/366 (46%), Gaps = 20/366 (5%)
Query: 56 VYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRR--RLVNDKTFKI 113
Y F+ + K Q + + M+ ++ + R W ++EM + L+ + F I
Sbjct: 113 AYRFYSWASK-QSGHRLDHDAYKAMIKVLSRMRQFGAVWALIEEMRQENPHLITPQVFVI 171
Query: 114 ALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWI 173
+ A R + K V M + GCE + ++ L + V EA L +L
Sbjct: 172 LMRRFASARMVHKAVQVLDEMPNYGCEPDEYVFGCLLDALRKNGSVKEAASLFEELRYRW 231
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
KP+ + L+ G+C G L+EA + M D G EP I V + ++ + + +K +A
Sbjct: 232 KPSVKHFTSLLYGWCKEGKLMEAKHVLVQMKDAGIEPDIVVYNNLLGGYAQADKMGDAYD 291
Query: 234 VFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
+ + MR K + ++Y ++I +CK ++ +A + EM + G +AD +T S++I G
Sbjct: 292 LLKEMRRKGCEP-NATSYTVLIQSLCKHERLEEATRVFVEMQRNGCQADLVTYSTLISGF 350
Query: 294 LARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
G+++ Y++++E+ + P+ +Y ++ + E ++ EM K GC P +
Sbjct: 351 CKWGKIKRGYELLDEMIQQGHFPNQVIYQHIMVAHEKKEELEECKELVNEMQKIGCAPDL 410
Query: 350 HTY--IMLLQGHLG--KRG--------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVER 397
Y ++ L LG K G G P ++ I + G ++ G ++A +Y +
Sbjct: 411 SIYNTVIRLACKLGEVKEGVRLWNEMESSGLSPSIDTFVIMINGFLEQGCLVEACEYFKE 470
Query: 398 VMNRGV 403
++ RG+
Sbjct: 471 MVGRGL 476
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 57/296 (19%), Positives = 130/296 (43%), Gaps = 16/296 (5%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHI 133
+ +N ++ ++ + ++ L+EM R+ N ++ + + +L + L++ F
Sbjct: 271 VVYNNLLGGYAQADKMGDAYDLLKEMRRKGCEPNATSYTVLIQSLCKHERLEEATRVFVE 330
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIK----PNEIAYGWLIKGYCD 189
M GC+ L + ++ C+ + L L E I+ PN++ Y ++ +
Sbjct: 331 MQRNGCQADLVTYSTLISGFCKWGKIKRGYEL---LDEMIQQGHFPNQVIYQHIMVAHEK 387
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
+L E ++ N M G P + + + +I K+ + E ++++ M + +
Sbjct: 388 KEELEECKELVNEMQKIGCAPDLSIYNTVIRLACKLGEVKEGVRLWNEMESSGLSP-SID 446
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNL--TLSSIIYGLLARGRL---REAYK 304
T+ I+I+ ++G + +A +EM RG+ A TL ++ LL +L ++A+
Sbjct: 447 TFVIMINGFLEQGCLVEACEYFKEMVGRGLFAAPQYGTLKELMNSLLRAEKLEMAKDAWN 506
Query: 305 VVEEIE--KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+ + + ++S + I L +EA M+ + P T+ L++G
Sbjct: 507 CITASKGCQLNVSAWTIWIHALFSKGHVKEACSFCIAMMDKDLMPQPDTFAKLMRG 562
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 146/297 (49%), Gaps = 2/297 (0%)
Query: 58 LFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALM 116
LF + + + + +T+ ++D KS N++ + L M GR+ + N T+ L
Sbjct: 173 LFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLH 232
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKP- 175
L + +L + ++ F M GC ++ ++ LC V A+ L+ +++ P
Sbjct: 233 GLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPA 292
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
+ ++Y L+ GYC +G + EA +++ M + P ++ F ++ +EA +
Sbjct: 293 DTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLL 352
Query: 236 QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
+ M+ D + TY IV+ + + +A ++EM R + + +T SS+I GL
Sbjct: 353 ENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCK 412
Query: 296 RGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
GR+ A +V++ ++KPD+ Y +I+GL R EA + EM+ + EP++ T+
Sbjct: 413 AGRVNHAMEVLKNVDKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTF 469
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 91/399 (22%), Positives = 170/399 (42%), Gaps = 56/399 (14%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMV 128
A + +T+ +VD + + +D E ++EM + + DK TF + R++ + +
Sbjct: 77 MAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEAL 136
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-----SEWIKPNEIAYGWL 183
+ + C + ++ LC+ + + EA L ++ W KP+ + Y L
Sbjct: 137 KLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAW-KPDVVTYTAL 195
Query: 184 IKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR- 242
I G+C G+L +A K+ +M P++ ++ K D+A+ +F+ M K
Sbjct: 196 IDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGC 255
Query: 243 --------------------------MDDLGLS-------TYRIVIDWMCKRGKISQAYT 269
MD++ + +Y ++D C+ G+I +A
Sbjct: 256 VPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQ 315
Query: 270 MLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK-----PDISLYHGLIKGL 324
+ +EM + D +T + ++ G RL EA ++E ++ PD+ Y ++ G
Sbjct: 316 LFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGY 375
Query: 325 LRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR--KGPDPLVNFD------- 375
R +R EA + +EMI R P TY L+ G L K GR + L N D
Sbjct: 376 SRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDG-LCKAGRVNHAMEVLKNVDKPDVVTY 434
Query: 376 TIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
TI + GL ++ +A +E ++N+ VE +N +
Sbjct: 435 TIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVI 473
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 177/414 (42%), Gaps = 82/414 (19%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNF 130
A N T+N +V+ + K+R +E L+EM + K+ L+T + V +N
Sbjct: 6 APNERTYNVVVNGLCKARLTSKAYEVLKEMR-----DGKSVAPDLVTYSTV------ING 54
Query: 131 FHIMN--DCGCEYSLEMLNK------------VVKTLCQRKLVVEAKYLILKLS-EWIKP 175
F D CE EM+ + VV LC+ + A ++ ++ + ++P
Sbjct: 55 FCKQGEMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEP 114
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWN----------------LMT--------------- 204
++ + LI G+C+ + EA K++ L+T
Sbjct: 115 DKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELF 174
Query: 205 -------DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDW 257
D ++P + +I+ F K ++AMK+ +M ++ + TY ++
Sbjct: 175 QEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVP-NVVTYSSLLHG 233
Query: 258 MCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PD 313
+CK G + QA + M +G + +T +++I+GL A ++ A +++E+ D
Sbjct: 234 LCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPAD 293
Query: 314 ISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK----------- 362
Y+ L+ G RL R EA Q+F+EM + C P TY L++G
Sbjct: 294 TVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLE 353
Query: 363 --RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
+ G DP V +I V G +A + ++AA++++ ++ R V Y+ +
Sbjct: 354 NMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLI 407
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 121/268 (45%), Gaps = 22/268 (8%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD-EGFEPSIDVVDKMIETFFKINK 227
+ E++ PNE Y ++ G C +A ++ M D + P + +I F K +
Sbjct: 1 MREFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGE 60
Query: 228 DDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLS 287
D A ++ + M + + TY V+D +C+ GK+ +A M+ EM +G+E D T S
Sbjct: 61 MDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFS 120
Query: 288 SIIYGLLARGRLREAYKVVEEIEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKR 343
++I G ++ EA K+ +EI L LI GL R RR EA ++F+EM R
Sbjct: 121 ALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMR 180
Query: 344 ---GCEPTMHTYIMLL-----QGHLGK--------RGRKGPDPLVNFDTIFVGGLVKAGK 387
+P + TY L+ G+L K GRK +V + ++ GL KAG
Sbjct: 181 EDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLL-HGLCKAGD 239
Query: 388 SLDAAKYVERVMNRGVEVPRFDYNKFLH 415
A R+ ++G Y +H
Sbjct: 240 LDQALDLFRRMTSKGCVPNVVTYTTLIH 267
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 155/375 (41%), Gaps = 40/375 (10%)
Query: 58 LFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT 117
LF + T K N +T+ ++ + + +D + EM D AL+
Sbjct: 246 LFRRMTSKG---CVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLD 302
Query: 118 ----LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI--LKLSE 171
L + E K++ F M C +V+ C + EA++L+ +K +
Sbjct: 303 GYCRLGRIEEAKQL---FKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAA 359
Query: 172 WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEA 231
I P+ + Y ++ GY +EA++ M P+ +I+ K + + A
Sbjct: 360 GIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHA 419
Query: 232 MKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
M+V K +D + TY IVI+ +C + +A T+LEEM + +E T +S+I
Sbjct: 420 MEVL-----KNVDKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIG 474
Query: 292 GLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
L G + EA+K++ + +P + Y L++G R R A ++F M ++ +
Sbjct: 475 ALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKS 534
Query: 348 TM-------HTYIMLLQGHLGKRG------------RKGPDPLVNFDTIFVGGLVKAGKS 388
+ + L++G R + +P V GL++AG++
Sbjct: 535 SSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRT 594
Query: 389 LDAAKYVERVMNRGV 403
+A K + + G+
Sbjct: 595 EEAGKLINSISKVGL 609
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 179/402 (44%), Gaps = 59/402 (14%)
Query: 37 LTHEFFLQ-ICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWE 95
+TH +Q +CN LS QY +++ C A +S+ FN +V + K+ + +
Sbjct: 141 VTHSSIVQALCNTGNLSRA-----MQYFRESVEC-APDSVLFNILVHGLCKANQLSEARQ 194
Query: 96 TLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQ 155
++EM R +V D +V + +++ Y +E ++++T+ +
Sbjct: 195 MIEEMSERGIVPD------------------VVTYNSLIDGLCKSYRMEEARQLLETMVK 236
Query: 156 RKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVV 215
RK ++PN + Y LI GYC G A ++ M G P +
Sbjct: 237 RK---------------VRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTF 281
Query: 216 DKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMF 275
+ +I F + +K D+A +V +M+ K + L TY ++I +C G+ ++A +L EM
Sbjct: 282 NSLISGFCQKSKIDKACEVLHLMK-KGLCAPNLVTYNVLISGLCDAGRANEACELLSEMD 340
Query: 276 KRGIEADNLTLSSIIYGLLARG-RLREAYKV----VEEIEKPDISLYHGLIKGLLRLRRA 330
RGI D +T +S+I G+ R ++ +A+++ VE PD Y L LL+ R
Sbjct: 341 GRGILPDIITYNSLI-GIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERF 399
Query: 331 REATQVFREMIKRGCEPTMHTYIMLLQGHLGKR------------GRKGPDPLVNFDTIF 378
EA + M G P + T+ L++G R R G DP + +
Sbjct: 400 DEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVL 459
Query: 379 VGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE 420
V GL KAG+ DA + + +++ G++ +H + E
Sbjct: 460 VTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLARE 501
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 127/267 (47%), Gaps = 23/267 (8%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
L + N I Y LI G+C GD+ A ++ M + G P + +++
Sbjct: 97 LGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNL 156
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
AM+ F+ V+ D L + I++ +CK ++S+A M+EEM +RGI D +T +S
Sbjct: 157 SRAMQYFR-ESVECAPDSVL--FNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNS 213
Query: 289 IIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+I GL R+ EA +++E + K P++ Y+ LI G + A Q+ MI+ G
Sbjct: 214 LIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSG 273
Query: 345 CEPTMHTYIMLLQG--------------HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLD 390
P + T+ L+ G HL K+G P+ LV ++ + + GL AG++ +
Sbjct: 274 THPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPN-LVTYN-VLISGLCDAGRANE 331
Query: 391 AAKYVERVMNRGVEVPRFDYNKFLHYY 417
A + + + RG+ YN + +
Sbjct: 332 ACELLSEMDGRGILPDIITYNSLIGIF 358
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 103/222 (46%), Gaps = 18/222 (8%)
Query: 218 MIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKR 277
++ T K + +A ++F+ + + D TY +I CK G + +A+ +L EM +R
Sbjct: 75 LLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKER 134
Query: 278 GIEADNLTLSSIIYGLLARGRLREAYKVV-EEIE-KPDISLYHGLIKGLLRLRRAREATQ 335
G D +T SSI+ L G L A + E +E PD L++ L+ GL + + EA Q
Sbjct: 135 GHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVECAPDSVLFNILVHGLCKANQLSEARQ 194
Query: 336 VFREMIKRGCEPTMHTYIMLLQGHLGKR--------------GRKGPDPLVNFDTIFVGG 381
+ EM +RG P + TY L+ G L K RK LV ++T+ + G
Sbjct: 195 MIEEMSERGIVPDVVTYNSLIDG-LCKSYRMEEARQLLETMVKRKVRPNLVTYNTL-IYG 252
Query: 382 LVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGV 423
K G + A + +ER++ G +N + + + +
Sbjct: 253 YCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKI 294
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 94/227 (41%), Gaps = 5/227 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHI 133
+TFN ++ + ID E L M + N T+ + + L + +
Sbjct: 279 VTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSE 338
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI--LKLSEWIKPNEIAYGWLIKGYCDVG 191
M+ G + N ++ C R +E + I L + + P+ I+Y L
Sbjct: 339 MDGRGILPDIITYNSLIGIFC-RNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSE 397
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTY 251
EA + + M D G P++ + ++E + DEA + +MR + D STY
Sbjct: 398 RFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMR-RVGCDPAASTY 456
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR 298
+++ +CK G++ A +L M GI+ + +I++ L G+
Sbjct: 457 EVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGK 503
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 75/166 (45%), Gaps = 8/166 (4%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK----TFKIALMTLAEVRELKKMVNF 130
IT+N ++ I ++ I+ ++ M R ++ D T +AL+ E +++
Sbjct: 349 ITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDN 408
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCD 189
M D G +L N +++ LC + + EA++L+ + P Y L+ G C
Sbjct: 409 ---MFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCK 465
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
G + +A ++ +M EG +P + ++ T + K D A+ F
Sbjct: 466 AGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYF 511
>gi|224107981|ref|XP_002314676.1| predicted protein [Populus trichocarpa]
gi|222863716|gb|EEF00847.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 100/409 (24%), Positives = 181/409 (44%), Gaps = 20/409 (4%)
Query: 15 LYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNS 74
+ ++ Y E + +L+ + TH+ Q+ F W F + K Q + H
Sbjct: 113 ILKKHYLSEDAVVEALNESGISATHDLVSQLLKRFSNQWLIALGVFIWA-KNQTGYVHKP 171
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALMTLAEVRELKKMVNFFHI 133
+N M+DI+GKSR L W+ +QEM G V+ T + L + + ++ F
Sbjct: 172 EIYNSMIDILGKSRKFSLMWDLVQEMSGLNGYVSLVTMGKVMKRLVRDGKYNEAIDAFRG 231
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDL 193
+ G S E +N ++ L + V +A+ + L+ + + +Y L GYC
Sbjct: 232 LEKFGLSKSTEAMNVLMDILARNGRVEDARAVALEFEGCLTLDYRSYNILSSGYCKARMF 291
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
+A K M + GF P++ IE + + KD +++ ++ L TY +
Sbjct: 292 GDARKTMEEMEERGFHPNVVSYTAFIEAYGE-QKDFRNVEIILNEMQEKGCPPDLITYTV 350
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP- 312
I + K +I++A + EE+ + G S+I+ L GRL++A+ + E++EK
Sbjct: 351 YIRALGKARQINKALEICEEIKRNGFVLGTQFYCSLIHSLCLSGRLKDAWNIFEDVEKQG 410
Query: 313 ---DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPD 369
D+ +Y +I L + A ++ +M + C+P + TY LL+ K+ K
Sbjct: 411 VGRDLGMYKAMISAACALSQDESALKLLHKMEEDSCKPDVQTYAPLLKMCCRKKSMKMLK 470
Query: 370 PLVN--FDT----------IFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
L+N F+ + V GL K GK A + + + +G+ VP
Sbjct: 471 FLLNHMFENDVSIDIVTYDLLVHGLRKQGKLKYACFFFQEAVLKGM-VP 518
>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
Length = 1205
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 148/293 (50%), Gaps = 7/293 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N + ++ ++D + K + + + EM + + D T+ + +LK+ +
Sbjct: 198 NVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLL 257
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAK-YLILKLSEWIKPNEIAYGWLIKGYCDV 190
+ M ++ N +V LC+ V EAK L + L +KP+ I Y L+ GY V
Sbjct: 258 NEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLV 317
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
++ +A ++N M+ G P + +I F K DEA+ +F+ M K M G+ T
Sbjct: 318 YEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVP-GIVT 376
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y +ID +CK G+I + +++EM RG A+ +T SS+I GL G L A + +++
Sbjct: 377 YSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMK 436
Query: 311 ----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
+P+ + L+ GL + R ++A +VF++++ +G ++TY +++ GH
Sbjct: 437 DQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGH 489
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 140/313 (44%), Gaps = 19/313 (6%)
Query: 111 FKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-L 169
F L + A+++ V+ H + G + L LN ++ C + ++ K L
Sbjct: 62 FNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKIL 121
Query: 170 SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD 229
P+ + LIKG C G + +A + + +GF+ + +I KI
Sbjct: 122 KRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTR 181
Query: 230 EAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSI 289
A+K+ Q + R+ + Y +ID +CK +S+AY + EM +GI AD +T S++
Sbjct: 182 AAIKLLQKID-GRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTL 240
Query: 290 IYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGC 345
IYG G+L+EA ++ E+ P++ Y+ L+ L + + +EA V M+K
Sbjct: 241 IYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACV 300
Query: 346 EPTMHTYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAK 393
+P + TY L+ G+ G P V+ TI + G K K +D A
Sbjct: 301 KPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCK-NKMVDEAL 359
Query: 394 YVERVMNRGVEVP 406
+ + M++ VP
Sbjct: 360 NLFKEMHQKNMVP 372
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 142/353 (40%), Gaps = 88/353 (24%)
Query: 146 LNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
LN ++K LC + V +A + KL ++ + N+++YG LI G C +GD A K+ +
Sbjct: 132 LNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKID 191
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM--------------------- 243
+P++ + +I+ K EA +F M VK +
Sbjct: 192 GRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLK 251
Query: 244 DDLGL-------------STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
+ +GL TY I++D +CK GK+ +A ++L M K ++ D +T S+++
Sbjct: 252 EAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLM 311
Query: 291 YGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
G +++A V + PD+ Y LI G + + EA +F+EM ++
Sbjct: 312 DGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMV 371
Query: 347 PTMHTYIMLLQGHLGKRGR----------------------------------------- 365
P + TY L+ G L K GR
Sbjct: 372 PGIVTYSSLIDG-LCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIA 430
Query: 366 -------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
+G P TI + GL K G+ DA + + ++ +G + + YN
Sbjct: 431 LFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYN 483
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 112/245 (45%), Gaps = 8/245 (3%)
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIA 179
++ V+ H + G + L LN ++ C + ++ K L P+ I
Sbjct: 939 MKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTIT 998
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
+ LI G C G + +A + + +GF+ + +I KI A+K+ + +
Sbjct: 999 FTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKID 1058
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
R+ + Y +ID +CK +S+AY + EM +GI AD +T +++IYG G+L
Sbjct: 1059 -GRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKL 1117
Query: 300 REAY----KVVEEIEKPDISLYHGLIKGLLRLRR--AREATQVFREMIKRGCEPTMHTYI 353
+EA K+V + P++ Y+ L+ L + + E+ + +M GC+ T+
Sbjct: 1118 KEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFE 1177
Query: 354 MLLQG 358
+++
Sbjct: 1178 IIISA 1182
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 121/263 (46%), Gaps = 16/263 (6%)
Query: 67 QPCFAHNSITFNRMVD---IIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRE 123
+ C + IT++ ++D ++ + + + + MG V+ T+ I + + +
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVH--TYTILINGFCKNKM 354
Query: 124 LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKP-NEIAYGW 182
+ + +N F M+ + + ++ LC+ + LI ++ + +P N I Y
Sbjct: 355 VDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSS 414
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
LI G C G L A ++N M D+G P+ +++ K + +A +VFQ + K
Sbjct: 415 LIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKG 474
Query: 243 MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR------ 296
L + TY ++ID CK+G + +A TML +M G D +T II L +
Sbjct: 475 YH-LNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIALFKKDENGGN 533
Query: 297 -GRLREAYKVVE--EIEKPDISL 316
G ++ +++VE + E P I+
Sbjct: 534 VGFDKKVWEIVEHKKGETPSITF 556
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 72/142 (50%), Gaps = 12/142 (8%)
Query: 145 MLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLM 203
M N ++ LC+ +LV +A L +++ + I + + Y LI G+C VG L EA + N M
Sbjct: 1068 MYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKM 1127
Query: 204 TDEGFEPSIDVVDKMIETFFKINKD--DEAMKVFQMMRVKRMDDLGLS----TYRIVIDW 257
+ P++ + +++ K KD DE++ + +M+D G T+ I+I
Sbjct: 1128 VLKTINPNVRTYNILVDALCKEGKDLLDESLSMLS-----KMEDNGCKANAVTFEIIISA 1182
Query: 258 MCKRGKISQAYTMLEEMFKRGI 279
+ ++ + + +L EM RG+
Sbjct: 1183 LFEKDENDKVEKLLHEMIARGL 1204
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 103/392 (26%), Positives = 181/392 (46%), Gaps = 30/392 (7%)
Query: 66 AQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVREL 124
A C + N +T N +V K I+ + EM D+ TF + L + +
Sbjct: 274 AAGCPSSN-VTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHV 332
Query: 125 KKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWL 183
K + +M G + + N ++ LC+ V EA ++ ++ PN + Y L
Sbjct: 333 KHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTL 392
Query: 184 IKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK-- 241
I C + EA+++ ++T +G P + + +I+ N AM++F+ M+ K
Sbjct: 393 ISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGC 452
Query: 242 RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
D+ TY ++ID +C RG++ +A ++L+EM G + +T +++I G R+ E
Sbjct: 453 HPDEF---TYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEE 509
Query: 302 AYKVVEEIEKPDIS----LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
A ++ +E+E IS Y+ LI GL + RR EA Q+ +M+ G +P TY LL
Sbjct: 510 AEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLT 569
Query: 358 -----GHLGKRG-------RKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVE 404
G + K G +P V + T+ + GL KAG+ A++ + V +G+
Sbjct: 570 YFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLIL-GLSKAGRVELASRLLRTVQLKGMV 628
Query: 405 VPRFDYNKFLHYYSNE----EGVVMFEEVGKK 432
+ YN + E E V +F E+ +K
Sbjct: 629 LAPQTYNPVIKALFREKRTSEAVRLFREMMEK 660
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 148/304 (48%), Gaps = 7/304 (2%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMV 128
F+ N++T+N ++ + K ++ E + + + ++ D TF + L + +
Sbjct: 382 FSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAM 441
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGY 187
F M GC N ++ +LC R + EA L+ ++ S N + Y LI G+
Sbjct: 442 ELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGF 501
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C + EA +I++ M +G ++ + +I+ K + +EA ++ M ++ +
Sbjct: 502 CKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDK 561
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
TY ++ + C+ G I +A +++ M G E D++T ++I GL GR+ A +++
Sbjct: 562 F-TYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLR 620
Query: 308 EIEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
++ + L Y+ +IK L R +R EA ++FREM+++G P TY ++ +G
Sbjct: 621 TVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGG 680
Query: 364 GRKG 367
G G
Sbjct: 681 GPIG 684
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 157/391 (40%), Gaps = 34/391 (8%)
Query: 67 QPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELK 125
QP F +S+ + ++ +GK + LQEM + TF I + + A+
Sbjct: 98 QPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFD 157
Query: 126 KMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL------SEWIKPNEIA 179
+ V IM + E+ L+ L+ LV K ++++ S IKP+
Sbjct: 158 EAVAVVDIMEE---EFGLK-LDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTT 213
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
+ LIK C + A + M G P +++ F + + A+++ + M
Sbjct: 214 FNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMV 273
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
+ T +++ CK G+I + + ++EM G D T +S++ GL G +
Sbjct: 274 AAGCPSSNV-TVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHV 332
Query: 300 REAYKV----VEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
+ A ++ ++E PDI Y+ LI GL +L EA ++ +MI R P TY L
Sbjct: 333 KHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTL 392
Query: 356 LQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
+ L K + KG P V + GL A + E + +G
Sbjct: 393 IS-TLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKG 451
Query: 403 VEVPRFDYNKFLHYYSN----EEGVVMFEEV 429
F YN + + EE + + +E+
Sbjct: 452 CHPDEFTYNMLIDSLCSRGRLEEALSLLKEM 482
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 112/265 (42%), Gaps = 33/265 (12%)
Query: 206 EGFEPSIDVVDKMIETF----------FKINK--DDEAMKVFQMMR---VKRMDDLGLST 250
E F+ ++ VVD M E F F +N D +K+ +++ V R ++T
Sbjct: 154 ELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTT 213
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
+ I+I +C+ +I A M+EEM G+ D T ++++ G + G + A ++ E++
Sbjct: 214 FNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMV 273
Query: 311 K---PDISL-YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG-- 364
P ++ + L+ G + R E EM G P T+ L+ G L + G
Sbjct: 274 AAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNG-LCRIGHV 332
Query: 365 -----------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
++G DP + + GL K G+ +A + + +++ R YN
Sbjct: 333 KHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTL 392
Query: 414 LHYYSNEEGVVMFEEVGKKLREVGL 438
+ E V E+ + L G+
Sbjct: 393 ISTLCKENQVEEATELARVLTSKGI 417
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 113/274 (41%), Gaps = 28/274 (10%)
Query: 166 ILKLSEWIK------PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMI 219
IL L +W P+ + Y +++ G ++ M G E +I
Sbjct: 88 ILDLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILI 147
Query: 220 ETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGI 279
E++ K DEA+ V +M + L TY +++ + K+ + M RGI
Sbjct: 148 ESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGI 207
Query: 280 EADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQ 335
+ D T + +I L ++R A ++EE+ PD + L++G + A +
Sbjct: 208 KPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALR 267
Query: 336 VFREMIKRGCEPTMHTYIMLLQGHLGKRGR-------------KG--PDPLVNFDTIFVG 380
+ +M+ GC + T +L+ G+ K GR +G PD F+++ V
Sbjct: 268 IREQMVAAGCPSSNVTVNVLVHGYC-KEGRIEEVLSFIDEMSNEGFRPDRFT-FNSL-VN 324
Query: 381 GLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
GL + G A + ++ ++ G + F YN +
Sbjct: 325 GLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLI 358
>gi|224123678|ref|XP_002319139.1| predicted protein [Populus trichocarpa]
gi|222857515|gb|EEE95062.1| predicted protein [Populus trichocarpa]
Length = 518
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 173/370 (46%), Gaps = 26/370 (7%)
Query: 4 DPGHLVRVCTILYQQQYSPESR--LHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQ 61
D G TI+ Q S ++R + S + C ++ E L++ + W + FF
Sbjct: 18 DDGLFQDAKTIVNILQESCDNRVEMKSKIEQCGIKVSQELVLEVLSRVRNDWEAAFTFFL 77
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRR----LVNDKTFKIALMT 117
+ + QP +AH+ ++ M+ I+GK R D W + EM + LV +T I +
Sbjct: 78 WAAR-QPGYAHSVREYHSMISILGKMRKFDTAWVLIDEMRGVKTGVSLVTPQTLLIMIRK 136
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNE 177
V ++ + +N F+ + +E ++ LC+ K V +A+ L+ N
Sbjct: 137 YCAVHDVGRAINTFYAYKRFKFDMGIEEFQSLLSALCRYKNVQDAEQLMYCNKAVFPLNT 196
Query: 178 IAYGWLIKGYCD-VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
++ ++ G+C+ +G E+ ++W M+ G + M+ + K A +++
Sbjct: 197 KSFNIVLNGWCNLIGSPRESERVWREMSKRGIRFDVVSYASMMSCYSK------AGSLYR 250
Query: 237 MMRV-KRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
++R+ K+M +G+ Y VI + K +++A+ +++ M ++G+ + +T +S+I
Sbjct: 251 VLRLYKQMKKIGIEPDRKVYNAVIHALAKGRLVNEAFNLMKTMEEKGVAPNIVTYNSLIK 310
Query: 292 GLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
L ++ EA +++ K P I YH ++ LR E + +M K GC+P
Sbjct: 311 PLCRARKVEEAKGAFDDMLKRCISPTIRTYHAFLRI---LRTGEEVFALLEKMRKMGCQP 367
Query: 348 TMHTYIMLLQ 357
TYIML++
Sbjct: 368 INDTYIMLIR 377
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 115/247 (46%), Gaps = 17/247 (6%)
Query: 74 SITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTL-AEVRELKKMVNFFH 132
+I N ++IG R + W +EM +R + D ++M+ ++ L +++ +
Sbjct: 200 NIVLNGWCNLIGSPRESERVW---REMSKRGIRFDVVSYASMMSCYSKAGSLYRVLRLYK 256
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVG 191
M G E ++ N V+ L + +LV EA L+ + E + PN + Y LIK C
Sbjct: 257 QMKKIGIEPDRKVYNAVIHALAKGRLVNEAFNLMKTMEEKGVAPNIVTYNSLIKPLCRAR 316
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS-- 249
+ EA ++ M P+I + F +I + E +VF ++ ++M +G
Sbjct: 317 KVEEAKGAFDDMLKRCISPTI----RTYHAFLRILRTGE--EVFALL--EKMRKMGCQPI 368
Query: 250 --TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
TY ++I C+ ++ + + +EM + GI D + +I+GL G L A+K
Sbjct: 369 NDTYIMLIRKFCRWRQLENVFKLWDEMSENGISPDRSSYIVLIHGLFLNGELDAAHKYYT 428
Query: 308 EIEKPDI 314
E+++ +
Sbjct: 429 EMKEKQL 435
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 146/290 (50%), Gaps = 15/290 (5%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
N +TFN ++D K N+ + +EM ++ L N T+ + L +L++ ++ +
Sbjct: 272 NEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLW 331
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDV 190
M G + ++ N ++ C++K++ EA + +S + + PN I + +I YC
Sbjct: 332 DKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKE 391
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS- 249
G + E + + M DEG P++ + +I + +D +A K + M++ GL
Sbjct: 392 GMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCR-KQDLQAAKEL----LNEMENKGLKG 446
Query: 250 ---TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
TY I+ID +CK K A +L EMF G++ +++T ++++ G G+L+ A V
Sbjct: 447 DVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVR 506
Query: 307 EEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
+EK P++ Y+ LIKG ++ + A + EM+++G P TY
Sbjct: 507 TRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTY 556
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 136/285 (47%), Gaps = 22/285 (7%)
Query: 146 LNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
N ++ C+ + V AK ++ + +KPN + Y LI G C+ G L EA +W+ M
Sbjct: 276 FNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMV 335
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
G +P+I + +I F K EA KVF + + + + T+ +ID CK G +
Sbjct: 336 GLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVP-NVITFNTMIDAYCKEGMM 394
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGL 320
+ +++ M GI + T + +I GL + L+ A +++ E+E K D+ Y+ L
Sbjct: 395 EEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNIL 454
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL--GK------------RGRK 366
I GL + ++R A ++ EM G +P TY L+ G+ GK + RK
Sbjct: 455 IDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERK 514
Query: 367 GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
P+ +V ++ + + G K K A + ++ +G+ R Y+
Sbjct: 515 QPN-VVTYN-VLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYD 557
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 147/364 (40%), Gaps = 56/364 (15%)
Query: 113 IALMTLAEVRELKKMVNF--FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL- 169
I ++ LA V+ L+ + F D G + SL N ++ L + + + +Y+ ++
Sbjct: 133 IDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMI 192
Query: 170 SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD 229
I N + I G C G L +A M G P++ + +++ + K
Sbjct: 193 KRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAG 252
Query: 230 EAMKVFQMMRVKRMDDLGLS--TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLS 287
+ K M+ + + + T+ +ID CK ++ A EEM K+G++ + +T +
Sbjct: 253 KMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYN 312
Query: 288 SIIYGLLARGRLREAY----KVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFRE---- 339
S+I GL G+L EA K+V KP+I Y+ LI G + + +EAT+VF +
Sbjct: 313 SLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQ 372
Query: 340 -------------------------------MIKRGCEPTMHTYIMLLQGHLGKRGRKGP 368
M+ G P + TY L+ G K+ +
Sbjct: 373 ELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAA 432
Query: 369 DPLVN------------FDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHY 416
L+N I + GL K KS +A K + + N G++ YN +
Sbjct: 433 KELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDG 492
Query: 417 YSNE 420
Y E
Sbjct: 493 YCME 496
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 106/227 (46%), Gaps = 3/227 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
N +T+N +++ K + + + ++ ++ LV N TF + + +++ +
Sbjct: 342 NIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLC 401
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
M D G ++ N ++ LC+++ + AK L+ ++ ++ +K + + Y LI G C
Sbjct: 402 SSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKN 461
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
A K+ N M + G +P+ + +++ + K A+ V M +R + T
Sbjct: 462 DKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQP-NVVT 520
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
Y ++I CK K+ A +L EM ++G+ + T + +L +G
Sbjct: 521 YNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIVRLEMLEKG 567
>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 485
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 171/377 (45%), Gaps = 57/377 (15%)
Query: 90 IDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKV 149
IDLF + +Q R L + F L +A+ + +++ FH M CG + L N V
Sbjct: 54 IDLFCKMIQS---RPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIV 110
Query: 150 VKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGF 208
+ LC+ V A ++ K+ ++ +P+ + LI G+C + +A + + M + GF
Sbjct: 111 INCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGF 170
Query: 209 EPSIDVVDKMIETFFKINKDDEAMKVF--------------------------------Q 236
P + + + +I+ KI ++A+++F +
Sbjct: 171 RPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAAR 230
Query: 237 MMRVKRMDDL--GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
+MR M D+ + T+ VID K GK S+A + EEM +R ++ D T +S+I GL
Sbjct: 231 LMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLC 290
Query: 295 ARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
GR+ EA ++++ + PD+ Y+ LI G + +R E T++FREM +RG
Sbjct: 291 MHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTI 350
Query: 351 TYIMLLQGHLGKRGRKGPD------------PLVNFDTIFVGGLVKAGKSLDAAKYVERV 398
TY ++QG+ + GR PD P + +I + GL + A E +
Sbjct: 351 TYNTIIQGYF-QAGR--PDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENM 407
Query: 399 MNRGVEVPRFDYNKFLH 415
+E+ YN +H
Sbjct: 408 QKSEIELDITTYNIVIH 424
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 102/207 (49%), Gaps = 11/207 (5%)
Query: 147 NKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N ++ LC V EAK ++ L +++ P+ + Y LI G+C + E +K++ M
Sbjct: 283 NSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQ 342
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL-GLSTYRIVIDWMCKRGKI 264
G + +I+ +F+ + D A ++F RMD + TY I++ +C ++
Sbjct: 343 RGLVGDTITYNTIIQGYFQAGRPDAAQEIFS-----RMDSRPNIRTYSILLYGLCMNWRV 397
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGL 320
+A + E M K IE D T + +I+G+ G + +A+ + + KPD+ Y +
Sbjct: 398 EKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTM 457
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEP 347
I G R R+ ++ ++R+M + G P
Sbjct: 458 ISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 101/205 (49%), Gaps = 12/205 (5%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
+ P+ Y LI G C G + EA ++ +LM +G P + + +I F K + DE
Sbjct: 275 VDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGT 334
Query: 233 KVFQMMRVKRMDDLGLS-TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNL-TLSSII 290
K+F+ M + + +G + TY +I + G+ A +E+F R N+ T S ++
Sbjct: 335 KLFREMAQRGL--VGDTITYNTIIQGYFQAGRPDAA----QEIFSRMDSRPNIRTYSILL 388
Query: 291 YGLLARGRLREAYKVVEEIEKP----DISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
YGL R+ +A + E ++K DI+ Y+ +I G+ ++ +A +FR + +G +
Sbjct: 389 YGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLK 448
Query: 347 PTMHTYIMLLQGHLGKRGRKGPDPL 371
P + +Y ++ G KR D L
Sbjct: 449 PDVVSYTTMISGFCRKRQWDKSDLL 473
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 106/226 (46%), Gaps = 12/226 (5%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND----KTFKIALMTLAEVRELKKMV 128
N ITF ++D+ K + +EM RR + D + L V E K+M+
Sbjct: 243 NVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQML 302
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGY 187
+ +M GC + N ++ C+ K V E L ++++ + + I Y +I+GY
Sbjct: 303 D---LMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGY 359
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
G A +I++ M P+I ++ + ++A+ +F+ M+ K +L
Sbjct: 360 FQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQ-KSEIELD 415
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
++TY IVI MCK G + A+ + + +G++ D ++ +++I G
Sbjct: 416 ITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGF 461
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 164/361 (45%), Gaps = 27/361 (7%)
Query: 55 PVYLFFQYTQ-KAQPCFAHNSITFNRMVDIIGKSRNID----LFWETLQEMGRRRLVNDK 109
P +LFF + C S+ N + S +ID F+ L+ R +V
Sbjct: 37 PSFLFFNHHHITTSTCTKKRSLPQNNGGFLSNNSISIDDALASFYRMLRMNPRPSVVEFG 96
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
F L ++A+ ++ +V+ + M+ G +++ LN ++ LC+ VV A ++ K+
Sbjct: 97 RF---LGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISVLGKM 153
Query: 170 SEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
+ I+P+ I + LI G C G++ EA ++N M G +P + +I K
Sbjct: 154 FKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNT 213
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
A+++ + M K L Y +ID +CK ++ A +L EM RGI D +T S+
Sbjct: 214 SMALQLLRKMEEKGCKP-NLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYST 272
Query: 289 IIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
I++G + G L EA + E+ P+ + L+ GL + EA VF M K+G
Sbjct: 273 ILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKG 332
Query: 345 CEPTMHTYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAA 392
EP +TY L+ G+ L KG P+V+ I + G K + LD A
Sbjct: 333 AEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKR-RRLDEA 391
Query: 393 K 393
K
Sbjct: 392 K 392
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 98/418 (23%), Positives = 183/418 (43%), Gaps = 59/418 (14%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
++ITFN +++ I EM RR D ++ + L + +
Sbjct: 161 DAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLL 220
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
M + GC+ +L ++ +LC+ LV +A L+ ++ + I P+ + Y ++ G+C +
Sbjct: 221 RKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSL 280
Query: 191 GDLIEASKIWN-----------------------------------LMTDEGFEPSIDVV 215
G L EA+ ++N MT +G EP+
Sbjct: 281 GHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTY 340
Query: 216 DKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMF 275
+ +++ + N+ DEA KV +M K + + +Y I+I+ CKR ++ +A ++L EM
Sbjct: 341 NALMDGYCLNNQMDEAQKVLDIMVDKGCAPV-VHSYNILINGYCKRRRLDEAKSLLVEMS 399
Query: 276 KRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAR 331
++ + D +T S+++ GL GR +EA + +E+ PD+ Y L+ GL +
Sbjct: 400 EKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLD 459
Query: 332 EATQVFREMIKRGCEPTMHTYIMLLQGH------------LGKRGRKGPDPLVNFDTIFV 379
EA ++ + M + EP + Y +L++G K G P + TI +
Sbjct: 460 EALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMI 519
Query: 380 GGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN----KFLHYYSNEEGVVMFEE-VGKK 432
GL+K G S +A + ++ + G YN FL + + + +E VGK+
Sbjct: 520 KGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKR 577
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 141/292 (48%), Gaps = 11/292 (3%)
Query: 73 NSITFNRMVDIIGKSRNID---LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
N++TF +VD + K + +E + + G N T+ + ++ +
Sbjct: 301 NTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEP--NAYTYNALMDGYCLNNQMDEAQK 358
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYC 188
IM D GC + N ++ C+R+ + EAK L++++SE + P+ + Y L++G C
Sbjct: 359 VLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLC 418
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
VG EA ++ M G P + +++ K DEA+K+ + M+ +++ +
Sbjct: 419 QVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEP-DI 477
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
Y I+I+ M GK+ A + ++F GI+ T + +I GLL G EAY++ +
Sbjct: 478 VLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRK 537
Query: 309 IEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
+E P+ Y+ +I+G L+ + + A ++ EM+ + T+ MLL
Sbjct: 538 MEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLL 589
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 161/363 (44%), Gaps = 27/363 (7%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVN-DKTFKIALM-TLAEVRELKKMVNFFHI 133
TF +VD + K+ + +E EM V D+ A++ TL + + +K+ F
Sbjct: 191 TFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQ 250
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDVGD 192
M CG N ++ L + EA K L L++ P E+ YG L+ C G
Sbjct: 251 MEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGT 310
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLSTY 251
L A +++ +M GF P+ + +I F K + EA +F +M+ D+ T+
Sbjct: 311 LERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDV--ITH 368
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK 311
++ID +CK G QA EEM + G + + +T ++II GL GR+ A+++++ +
Sbjct: 369 TVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIA 428
Query: 312 ----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG--------- 358
PD Y L+ G +L R EA Q+ E+ K P + Y L+ G
Sbjct: 429 HGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEK 488
Query: 359 ------HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNK 412
K + DP + I GL K G+ +A + +R+++ G + YN
Sbjct: 489 TLDDLFEQSKAAAETLDPGLCCSIIV--GLCKTGRLDEACRIFQRMVSEGCKPDATTYNI 546
Query: 413 FLH 415
++
Sbjct: 547 LIN 549
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 150/314 (47%), Gaps = 10/314 (3%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMT 117
FF++ + Q F H+ T+N +++++ +N + +EM + + N +F I + +
Sbjct: 105 FFRWAGE-QAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRS 163
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE--WIKP 175
A R V F IM C+ L +V LC+ + +A + ++ ++ P
Sbjct: 164 FARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPP 223
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
+ + +++ + EA +++ M GF P + MI+ K EA+KV
Sbjct: 224 DRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVL 283
Query: 236 QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
M K + TY I+++ +CK G + +A + M G +++ +S+I+G
Sbjct: 284 DNMLAKACVPTEV-TYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAK 342
Query: 296 RGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
GR++EA + +E+ +PD+ + +I GL + +A + F EM++ GC+P + T
Sbjct: 343 SGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVT 402
Query: 352 YIMLLQGHLGKRGR 365
Y ++QG L K GR
Sbjct: 403 YTTIIQG-LSKIGR 415
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 112/465 (24%), Positives = 188/465 (40%), Gaps = 48/465 (10%)
Query: 30 LSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRN 89
+++ F + + + F S R + + + + + IT M+D + KS N
Sbjct: 321 MAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGN 380
Query: 90 IDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIMNDC---GCEYSLEM 145
+ ++ +EM R N T+ + L+++ ++ N F IM GC
Sbjct: 381 FEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKI---GRVANAFRIMKGMIAHGCFPDSVT 437
Query: 146 LNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVG-------DLIEAS 197
++ C+ + EA L+ +L + PN Y L+ G CD G DL E S
Sbjct: 438 YICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQS 497
Query: 198 KIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDW 257
K D G SI I K + DEA ++FQ M V +TY I+I+
Sbjct: 498 KAAAETLDPGLCCSI------IVGLCKTGRLDEACRIFQRM-VSEGCKPDATTYNILING 550
Query: 258 MC--KRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK---- 311
+C + ++ +A+ +L ++ K G D +T + + GL G + A K++EE
Sbjct: 551 LCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWN 610
Query: 312 PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG------- 364
D+ Y L GL + A +F+EM+++G P Y ++ G + +
Sbjct: 611 ADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKF 670
Query: 365 -----RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPR-FDYNKFLHYYS 418
KG P V T V L AG +A E ++ RG V Y+ +H +
Sbjct: 671 FDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFC 730
Query: 419 N----EEGVVMFEEV---GKKLREVGLADLADIFQRYGKKMATRE 456
+ + +FE++ G V A L D R GK +E
Sbjct: 731 KALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQE 775
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 81/186 (43%), Gaps = 6/186 (3%)
Query: 178 IAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQM 237
+AY L G C G + A ++ M +G P +I K+ K ++A K F
Sbjct: 614 VAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDE 673
Query: 238 MRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRG-IEADNLTLSSIIYGLLAR 296
M + + ++TY ++ +C G + +A+ E M RG + + ++I+G
Sbjct: 674 M-IGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKA 732
Query: 297 GRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
++ A K+ E++ P L GL+R + +A ++ +EM G P T+
Sbjct: 733 LKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATF 792
Query: 353 IMLLQG 358
+L G
Sbjct: 793 TAILDG 798
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/274 (20%), Positives = 123/274 (44%), Gaps = 11/274 (4%)
Query: 73 NSITFNRMVDIIGKSRN--IDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVN 129
++ T+N +++ + +SR ++ + L ++ + + D T+ + L ++ E+ + V
Sbjct: 540 DATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVK 599
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYC 188
+ G + + LC + V A L ++ + P+ AY +I G
Sbjct: 600 MLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLI 659
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
V L +A K ++ M +G +P++ +++ DEA F+ M + +
Sbjct: 660 KVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSV 719
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
Y +I CK K+ A + E+M RG +T +S+ GL+ G+ +A ++++E
Sbjct: 720 MIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQE 779
Query: 309 I----EKPDISLYHGLIKGLLRLRRAREATQVFR 338
+ P + + ++ G LR++ E+ ++ +
Sbjct: 780 MAAGGSPPHAATFTAILDG---LRKSDESGKLLK 810
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 80/175 (45%), Gaps = 20/175 (11%)
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
TY +++ + SQ Y + EEM K GI + + + +I R +A E +
Sbjct: 121 TYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIM 180
Query: 310 E----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP---TMHTYIM--LLQGHL 360
+ KPD+ + L+ L + +A +VF EM+ G P +HT ++ LL+
Sbjct: 181 KRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKR 240
Query: 361 GKRGRKG---------PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
K R+ P + ++T+ + GL KAG + +A K ++ ++ + VP
Sbjct: 241 VKEAREVFGQMEKCGFPPDAIAYNTM-IDGLAKAGHAQEALKVLDNMLAKAC-VP 293
>gi|449505568|ref|XP_004162510.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 614
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 163/353 (46%), Gaps = 8/353 (2%)
Query: 10 RVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPC 69
++ T+L + SPE+ + +L+ + +++ Q+ F W Y F++ + P
Sbjct: 168 KISTMLENRYPSPEN-VAEALNGKAYRVSNTLVAQLLKRFHNDWIQAYGIFKWAKDQIP- 225
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGR-RRLVNDKTFKIALMTLAEVRELKKMV 128
+ H+ ++N MVDI+GK++N L WE + EM V+ +T + LA ++ +
Sbjct: 226 YRHSPESYNSMVDILGKAKNFRLMWELVDEMNHLAGSVSLETMSKVIRRLARAGRHQEAI 285
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYC 188
+ F + G +N ++ L + V +A + +L I N ++ LI GYC
Sbjct: 286 HAFRNIEKYGISTDTTAMNVLMDALVKEASVEDAHNVFRELKCSIPFNLASFNVLIHGYC 345
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
L EA KI + G EP + IE + KV M K +
Sbjct: 346 KAKKLDEAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRNVDKVLVQMEHKGCKP-NV 404
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
T+ I++ + K +I++A + E+M K G D+ SS+I+ L GRL + ++VE+
Sbjct: 405 ITFTIIMHALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIFILGKAGRLTDVKEIVED 464
Query: 309 IEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
+EK PD+ Y+ LI + A + +M + C+P + TY LL+
Sbjct: 465 MEKQGVTPDVLTYNTLISCACAHSQEETALTLLLKMEEVSCKPDLKTYHPLLK 517
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 133/297 (44%), Gaps = 43/297 (14%)
Query: 171 EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLM---TDE----GFEPSIDVVDKMIETFF 223
+W K ++I Y + Y + D++ +K + LM DE S++ + K+I
Sbjct: 218 KWAK-DQIPYRHSPESYNSMVDILGKAKNFRLMWELVDEMNHLAGSVSLETMSKVIRRLA 276
Query: 224 KINKDDEAMKVFQMMRVKRMDDLGLST----YRIVIDWMCKRGKISQAYTMLEEMFKRGI 279
+ + EA+ F + ++ G+ST +++D + K + A+ + E+ K I
Sbjct: 277 RAGRHQEAIHAF-----RNIEKYGISTDTTAMNVLMDALVKEASVEDAHNVFREL-KCSI 330
Query: 280 EADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQ 335
+ + + +I+G +L EA+K++ E+EK PD+ Y I+ R + R +
Sbjct: 331 PFNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRNVDK 390
Query: 336 VFREMIKRGCEPTMHTYIMLLQGHLGKRG-------------RKGPDPLVNFDTIFVGGL 382
V +M +GC+P + T+ +++ LGK ++G P +F + + L
Sbjct: 391 VLVQMEHKGCKPNVITFTIIMHA-LGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIFIL 449
Query: 383 VKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH---YYSNEEGVVMF----EEVGKK 432
KAG+ D + VE + +GV YN + +S EE + EEV K
Sbjct: 450 GKAGRLTDVKEIVEDMEKQGVTPDVLTYNTLISCACAHSQEETALTLLLKMEEVSCK 506
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 101/234 (43%), Gaps = 7/234 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRE--LKKMVNF 130
N +FN ++ K++ +D W+ + E+ + L D A + A RE + +
Sbjct: 333 NLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPDVISYTAFIE-AHCREKDFRNVDKV 391
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCD 189
M GC+ ++ ++ L + K + EA + K+ E P+ Y LI
Sbjct: 392 LVQMEHKGCKPNVITFTIIMHALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIFILGK 451
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGL 248
G L + +I M +G P + + +I ++++ A+ + +M V DL
Sbjct: 452 AGRLTDVKEIVEDMEKQGVTPDVLTYNTLISCACAHSQEETALTLLLKMEEVSCKPDL-- 509
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
TY ++ C++ ++ +L+ MFK + + T + ++ GL G+L A
Sbjct: 510 KTYHPLLKMFCRKKRMKVLKFLLDHMFKNDVSIEAGTYAILVRGLCENGKLHLA 563
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 93/239 (38%), Gaps = 39/239 (16%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALM-TLAEVRELKKMVNFF 131
N ITF ++ +GK++ I+ + ++M + V D +F +L+ L + L +
Sbjct: 403 NVITFTIIMHALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIFILGKAGRLTDVKEIV 462
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
M G + N ++ C A L+LK+ E KP+ Y L+K +C
Sbjct: 463 EDMEKQGVTPDVLTYNTLISCACAHSQEETALTLLLKMEEVSCKPDLKTYHPLLKMFCRK 522
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
+ K+ + D F+ + + EA T
Sbjct: 523 KRM----KVLKFLLDHMFKNDVSI---------------EA-----------------GT 546
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
Y I++ +C+ GK+ A + EM + + + T ++ L R + E K++E +
Sbjct: 547 YAILVRGLCENGKLHLACSFFGEMLSKAMVPKDSTF-KMLKEELERKSMLEEMKIIENL 604
>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like, partial [Brachypodium distachyon]
Length = 907
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 170/382 (44%), Gaps = 44/382 (11%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMV 128
A N +T N +++ + K+R + E M D T++ + ++ +L +
Sbjct: 441 LARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRAT 500
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGY 187
M + G S+EM N + L K + + +++S + + PN + YG LI G+
Sbjct: 501 QIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGW 560
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM-DDL 246
C G+L +A ++ M ++G +P++ + ++ F++ K DEA V Q + M D
Sbjct: 561 CKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDC 620
Query: 247 GLST------------------------YRIVIDWMCKRGKISQAYTMLEEMFKRGIEAD 282
ST + IVI +CK G+++ A + E++ +G D
Sbjct: 621 SASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPD 680
Query: 283 NLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFR 338
N T SS+I+G A G + A+ + +E+ P+I Y+ LI GL + A +F
Sbjct: 681 NFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFN 740
Query: 339 EMIKRGCEPTMHTYIMLLQGHLG------------KRGRKGPDPLVNFDTIFVGGLVKAG 386
++ +G P TY L+ GH K ++G P V TI + GL G
Sbjct: 741 KLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQG 800
Query: 387 KSLDAAKYVERVMNRGVEVPRF 408
+A K +++++ V+ P F
Sbjct: 801 YMEEAIKLLDQMIENNVD-PNF 821
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 166/391 (42%), Gaps = 49/391 (12%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMV 128
F ++T+N +++ ID + M +R +V N+ + L + + ++ +
Sbjct: 371 FTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQAL 430
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKP-NEIAYGWLIKGY 187
N + G ++ +N V+ LC+ + + EA+ L ++ EW P + + Y LI GY
Sbjct: 431 NLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGY 490
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C +GDL A++I M + GF PS+++ + I F + + + M K +
Sbjct: 491 CKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSP-N 549
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
TY +I CK G + A + EM ++G++ + S ++ G++ EA V++
Sbjct: 550 TVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQ 609
Query: 308 EIEKPDI-------------------SLYHG-----------LIKGLLRLRRAREATQVF 337
++ D+ SL G +I GL +L R +A +F
Sbjct: 610 KLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLF 669
Query: 338 REMIKRGCEPTMHTYIMLLQG---------HLGKR-----GRKGPDPLVNFDTIFVGGLV 383
++ +G P TY L+ G G R R P+ +V ++++ + GL
Sbjct: 670 EDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPN-IVTYNSL-IYGLC 727
Query: 384 KAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
K+ A ++ ++G+ YN +
Sbjct: 728 KSCNVSRAVSLFNKLQSKGISPNAITYNTLI 758
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/368 (20%), Positives = 156/368 (42%), Gaps = 19/368 (5%)
Query: 85 GKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLE 144
G+ ++ ++ + + G RR + ++ L L + ++ V F M G
Sbjct: 108 GQLKDALYVFDEMGKAGSRRTL--RSCNRLLNQLVQAGDIGTAVAVFQQMRCAGTLPDDF 165
Query: 145 MLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLM 203
+ + K C+ V A + ++ E + N +AY ++ GYC +G A K+ + +
Sbjct: 166 TVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQTEVARKLLHSL 225
Query: 204 TDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGK 263
+G P++ +++ + K + +EA KV + ++ + Y +I+ C+RG+
Sbjct: 226 QVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALINGYCQRGR 285
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISL----YHG 319
+ A + +EM G++ + +++I G GR+ E K+++ E ++L Y+
Sbjct: 286 MEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNT 345
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG------------RKG 367
L+ G R +A + M++ G T TY LL G + ++G
Sbjct: 346 LVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRG 405
Query: 368 PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFE 427
P + + G KAGK+ A + + RG+ N ++ + E
Sbjct: 406 VVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAE 465
Query: 428 EVGKKLRE 435
E+ +++E
Sbjct: 466 ELFHRMKE 473
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 88/187 (47%), Gaps = 5/187 (2%)
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
+I + +I G C +G + +A ++ + +GF P +I D A +
Sbjct: 646 KIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRD 705
Query: 237 MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR 296
M R+ + TY +I +CK +S+A ++ ++ +GI + +T +++I G
Sbjct: 706 EMLSARLTP-NIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKD 764
Query: 297 GRLREAYKV----VEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
G EA+K+ ++E +P + Y LI GL EA ++ +MI+ +P TY
Sbjct: 765 GNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITY 824
Query: 353 IMLLQGH 359
L+QG+
Sbjct: 825 WTLIQGY 831
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 113/281 (40%), Gaps = 68/281 (24%)
Query: 179 AYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
++ L++ + D G L +A +++ M G ++ ++++ + A+ VFQ M
Sbjct: 96 SFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQM 155
Query: 239 RVKRM--DDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEAD-------------- 282
R DD T I+ C+ G+++ A L+EM + G++ +
Sbjct: 156 RCAGTLPDDF---TVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRI 212
Query: 283 ----------------NLTLSSIIYGLLAR-----GRLREAYKVVEEIEKP-----DISL 316
L+ + + Y LL + GR+ EA KVV+EI++ D
Sbjct: 213 GQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVA 272
Query: 317 YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDT 376
Y LI G + R +A +V EMI G + M Y ++ G+ K GR G
Sbjct: 273 YGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYC-KLGRMG--------- 322
Query: 377 IFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
+ K L A +Y RGV + + YN + Y
Sbjct: 323 -------EVEKLLQANEY------RGVNLDEYSYNTLVDGY 350
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 74/173 (42%), Gaps = 2/173 (1%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMV 128
F ++ T++ ++ S +IDL + EM RL N T+ + L + + + V
Sbjct: 677 FIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAV 736
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGY 187
+ F+ + G + N ++ C+ EA L K+ E I+P Y LI G
Sbjct: 737 SLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGL 796
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
C G + EA K+ + M + +P+ +I+ + + K++ M +
Sbjct: 797 CTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKLYNEMHI 849
>gi|449457845|ref|XP_004146658.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
gi|449484609|ref|XP_004156929.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
Length = 501
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 151/322 (46%), Gaps = 23/322 (7%)
Query: 108 DKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVE-AKYLI 166
+K++ L L E +LK F+ M G ++ LN ++K C+ ++ A +L
Sbjct: 149 EKSYISVLAILVEENQLKSAFRFYRDMRKMGIPPTVTSLNVLIKAFCKNSGTMDKAMHLF 208
Query: 167 LKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI 225
+S +P+ YG LI G C ++EA ++ M +G PS+ +I ++
Sbjct: 209 RTMSNHGCEPDSYTYGTLINGLCRFRSIVEAKELLQEMETKGCSPSVVTYTSIIHGLCQL 268
Query: 226 NKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
N DEAM++ + M+ K ++ + TY ++D CK G S+A +LE M ++ + + ++
Sbjct: 269 NNVDEAMRLLEDMKDKNIEP-NVFTYSSLMDGFCKTGHSSRARDILELMIQKRLRPNMIS 327
Query: 286 LSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMI 341
S+++ GL G++ EA ++ + ++ KPD LY ++ L + R +EA EM+
Sbjct: 328 YSTLLNGLCNEGKINEALEIFDRMKLQGFKPDAGLYGKIVNCLCDVSRFQEAANFLDEMV 387
Query: 342 KRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNR 401
G +P T+ + ++ H + GL S A + V+ R
Sbjct: 388 LCGIKPNRITWSLHVRTH----------------NRVIHGLCTINNSNRAFQLYLSVLTR 431
Query: 402 GVEVPRFDYNKFLHYYSNEEGV 423
G+ + +N L + N++ +
Sbjct: 432 GISITVDTFNSLLKCFCNKKDL 453
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 117/271 (43%), Gaps = 48/271 (17%)
Query: 124 LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGW 182
+ K ++ F M++ GCE ++ LC+ + +VEAK L+ ++ ++ P+ + Y
Sbjct: 201 MDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFRSIVEAKELLQEMETKGCSPSVVTYTS 260
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
+I G C + ++ EA ++ M D+ EP++ +++ F K A + ++M KR
Sbjct: 261 IIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGFCKTGHSSRARDILELMIQKR 320
Query: 243 MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
+ + +Y +++ +C GKI++A + + M +G + D I+ L R +EA
Sbjct: 321 LRP-NMISYSTLLNGLCNEGKINEALEIFDRMKLQGFKPDAGLYGKIVNCLCDVSRFQEA 379
Query: 303 YKVVEEIE----KPD-------ISLYHGLIKGLLRLRRAREATQVF-------------- 337
++E+ KP+ + ++ +I GL + + A Q++
Sbjct: 380 ANFLDEMVLCGIKPNRITWSLHVRTHNRVIHGLCTINNSNRAFQLYLSVLTRGISITVDT 439
Query: 338 ---------------------REMIKRGCEP 347
EM+ GC P
Sbjct: 440 FNSLLKCFCNKKDLPKTSRILDEMVINGCIP 470
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 115/240 (47%), Gaps = 14/240 (5%)
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD-DEAM 232
KP E +Y ++ + L A + + M G P++ ++ +I+ F K + D+AM
Sbjct: 146 KPTEKSYISVLAILVEENQLKSAFRFYRDMRKMGIPPTVTSLNVLIKAFCKNSGTMDKAM 205
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
+F+ M + TY +I+ +C+ I +A +L+EM +G +T +SII+G
Sbjct: 206 HLFRTMSNHGCEPDSY-TYGTLINGLCRFRSIVEAKELLQEMETKGCSPSVVTYTSIIHG 264
Query: 293 LLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
L + EA +++E+++ +P++ Y L+ G + + A + MI++ P
Sbjct: 265 LCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGFCKTGHSSRARDILELMIQKRLRPN 324
Query: 349 MHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRF 408
M +Y LL G L G K + L FD + + G DA Y +++N +V RF
Sbjct: 325 MISYSTLLNG-LCNEG-KINEALEIFDRMKLQGFKP-----DAGLY-GKIVNCLCDVSRF 376
Score = 41.2 bits (95), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 36/182 (19%), Positives = 78/182 (42%), Gaps = 17/182 (9%)
Query: 275 FKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISLYHGLIKGLLR----LRRA 330
+ G + D T S +I L++ + R A +++ +++ I + ++ + R + +
Sbjct: 71 YANGFKHDLNTFSLMISKLISANQFRLAETLLDRMKEEKIDVTEDILLSICRAYGRIHKP 130
Query: 331 REATQVFREMIKRGCEPTMHTYIMLL-----QGHLGKRGR-------KGPDPLVNFDTIF 378
++ +VF +M C+PT +YI +L + L R G P V +
Sbjct: 131 LDSIRVFHKMQDFHCKPTEKSYISVLAILVEENQLKSAFRFYRDMRKMGIPPTVTSLNVL 190
Query: 379 VGGLVKAGKSLDAAKYVERVM-NRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVG 437
+ K ++D A ++ R M N G E + Y ++ +V +E+ +++ G
Sbjct: 191 IKAFCKNSGTMDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFRSIVEAKELLQEMETKG 250
Query: 438 LA 439
+
Sbjct: 251 CS 252
>gi|326520119|dbj|BAK03984.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 485
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/429 (22%), Positives = 198/429 (46%), Gaps = 26/429 (6%)
Query: 4 DPGHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYT 63
DP R+C ++ + + S L L + +T + ++ + Y FF++
Sbjct: 34 DPAK--RLCKLIISCRQA--SGLEIELDHSDLRVTPDVAERVLERLDNAGMLAYRFFEWA 89
Query: 64 QKAQ---PCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAE 120
+K + C AH +F+ +V + K R L W+ + M R+ +VN +TF I + A
Sbjct: 90 RKQRRGGGC-AHTVRSFHTVVASLAKIRQYQLMWDVVAIMRRQGVVNVETFGIIMRKYAR 148
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAY 180
+++ + V F++M G +L N ++ LC+ K V +A+ + +++ P+ Y
Sbjct: 149 AQKVDEAVYTFNVMEKYGVVPNLAAFNSLLCALCKSKNVRKAQEIFEQMNGRFSPDAKTY 208
Query: 181 GWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
L++G+ +L + K+++ M D G +P I M+++ K + +EA+ V Q M
Sbjct: 209 SILLEGWGRAPNLPKMRKVYSDMLDAGCQPDIVTYGIMVDSLCKTGRVEEAVFVVQDMTS 268
Query: 241 KRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
+ Y +++ +I A +M K GI D + ++++ +
Sbjct: 269 RGCQPTTF-IYSVLVHTYGVEMRIEDAVATFLDMQKDGIVPDVVVYNALVTAFCKVKKFD 327
Query: 301 EAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
A++V++++E P+ ++ ++ L+ L + EA +VFR MIKR C+P TY M++
Sbjct: 328 NAFRVMDDMEGHGITPNSRTWNIILNKLISLGKDDEAYRVFRRMIKR-CQPDSDTYTMMI 386
Query: 357 QG-----------HLGKRGR-KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVE 404
+ + K R K P ++ ++ + GL G+ A +E ++ +G+
Sbjct: 387 KMFCENDRLEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIR 446
Query: 405 VPRFDYNKF 413
P + K
Sbjct: 447 PPGSTFGKL 455
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 120/296 (40%), Gaps = 71/296 (23%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
N FN ++ + KS+N+ E ++M R + KT+ I L L KM +
Sbjct: 170 NLAAFNSLLCALCKSKNVRKAQEIFEQMNGRFSPDAKTYSILLEGWGRAPNLPKMRKVYS 229
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS---------------------- 170
M D GC+ + +V +LC+ V EA +++ ++
Sbjct: 230 DMLDAGCQPDIVTYGIMVDSLCKTGRVEEAVFVVQDMTSRGCQPTTFIYSVLVHTYGVEM 289
Query: 171 --------------EWIKPNEIAYGWLIKGYCDVGDLIEA---------------SKIWN 201
+ I P+ + Y L+ +C V A S+ WN
Sbjct: 290 RIEDAVATFLDMQKDGIVPDVVVYNALVTAFCKVKKFDNAFRVMDDMEGHGITPNSRTWN 349
Query: 202 LM---------TDEGF----------EPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
++ DE + +P D MI+ F + ++ + A+KV++ MR+K+
Sbjct: 350 IILNKLISLGKDDEAYRVFRRMIKRCQPDSDTYTMMIKMFCENDRLEMALKVWKYMRLKQ 409
Query: 243 MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR 298
+ T+ ++I+ +C +G++SQA +LE+M ++GI T + LL GR
Sbjct: 410 FLP-SMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKEGR 464
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 86/206 (41%), Gaps = 28/206 (13%)
Query: 218 MIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKR 277
++ + KI + V +MR R + + T+ I++ + K+ +A M K
Sbjct: 108 VVASLAKIRQYQLMWDVVAIMR--RQGVVNVETFGIIMRKYARAQKVDEAVYTFNVMEKY 165
Query: 278 GIEADNLTLSSIIYGLLARGRLREAYKVVEEIE---KPDISLYHGLIKGLLRLRRAREAT 334
G+ + +S++ L +R+A ++ E++ PD Y L++G R +
Sbjct: 166 GVVPNLAAFNSLLCALCKSKNVRKAQEIFEQMNGRFSPDAKTYSILLEGWGRAPNLPKMR 225
Query: 335 QVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKY 394
+V+ +M+ GC+P + TY I V L K G+ +A
Sbjct: 226 KVYSDMLDAGCQPDIVTY-----------------------GIMVDSLCKTGRVEEAVFV 262
Query: 395 VERVMNRGVEVPRFDYNKFLHYYSNE 420
V+ + +RG + F Y+ +H Y E
Sbjct: 263 VQDMTSRGCQPTTFIYSVLVHTYGVE 288
>gi|224111544|ref|XP_002315895.1| predicted protein [Populus trichocarpa]
gi|222864935|gb|EEF02066.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/400 (22%), Positives = 192/400 (48%), Gaps = 22/400 (5%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTL 118
FF++ +K Q F +++ +++ +++ +GK + ++ W + +M ++ L+N +TF +
Sbjct: 25 FFRWAEK-QKGFQYSTESYHALIESLGKIKQFNVIWNLVTDMKQKGLLNKETFALISRRY 83
Query: 119 AEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEI 178
A R++K+ V+ F M G + +N+++ TLC+ + V A+ + K+++ +I
Sbjct: 84 ARARKVKEAVDAFMKMEKFGLKIESSDVNRLLDTLCKSRQVERAQLVFDKMNKRGFVADI 143
Query: 179 -AYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQM 237
+Y L++G+ +L +++N M DEGFEP + +I K + D+A+++F
Sbjct: 144 KSYTILLEGWGQEKNLSRLMEVYNEMKDEGFEPDVVTYGILINAHCKSRRYDDAIELFHE 203
Query: 238 MRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
M K Y +I+ + ++S+A E G + T ++++
Sbjct: 204 MEAKNCKP-SPHIYCTLINGLGAEKRLSEALEFFELSKASGFVPEAPTYNAVVGAYCWSE 262
Query: 298 RLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYI 353
R+ + + ++E+ K P Y ++ L+R + + A VF++M GC+P++ TY
Sbjct: 263 RMDDVQRTIDEMRKGGVGPSARTYDIILHHLIRAGKTKIAYSVFQKMSCEGCQPSVSTYE 322
Query: 354 MLLQGHLG------------KRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNR 401
++++ + KG P+++ + + L K +A Y + +++
Sbjct: 323 IIVRMFCNEDRVDMAIKVWDQMKAKGILPVMHMFSTLINSLCHESKLDEACMYFQEMLDV 382
Query: 402 GVEVPRFDYNKFLHYYSNE---EGVVMFEEVGKKLREVGL 438
G+ P ++ +E + VV+FE KLR+ L
Sbjct: 383 GIRPPAQLFSNLKQNLLDEGKKDTVVVFERKLDKLRKAPL 422
>gi|115455503|ref|NP_001051352.1| Os03g0761300 [Oryza sativa Japonica Group]
gi|14488357|gb|AAK63924.1|AC084282_5 unknown protein [Oryza sativa Japonica Group]
gi|108711214|gb|ABF99009.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549823|dbj|BAF13266.1| Os03g0761300 [Oryza sativa Japonica Group]
gi|125545804|gb|EAY91943.1| hypothetical protein OsI_13630 [Oryza sativa Indica Group]
gi|125588003|gb|EAZ28667.1| hypothetical protein OsJ_12678 [Oryza sativa Japonica Group]
Length = 484
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 158/346 (45%), Gaps = 40/346 (11%)
Query: 57 YLFFQYT--QKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIA 114
Y FF++ QK C AH +++ +V + K R L W+ + M R VN +TF I
Sbjct: 83 YRFFEWARRQKRGGC-AHTVRSYHTVVASLAKIRQYQLMWDVVAVMRREGAVNVETFGII 141
Query: 115 LMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIK 174
+ A +++ + V F++M G +L N ++ LC+ K V +A+ + K++
Sbjct: 142 MRKYARAQKVDEAVYTFNVMEKYGVVPNLAAFNSLLGALCKSKNVRKAQEIFDKMNSRFS 201
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+ Y L++G+ +L + ++++ M D G EP I M+++ K + +EA++V
Sbjct: 202 PDAKTYSILLEGWGRAPNLPKMREVYSEMLDAGCEPDIVTYGIMVDSLCKTGRVEEAVRV 261
Query: 235 FQMMRVK--------------------RMDDL--------------GLSTYRIVIDWMCK 260
Q M + R++D + Y ++ CK
Sbjct: 262 VQDMTSRGCQPTTYIYSVLVHTYGVEMRIEDAVATFLDMEKDGIVPDIVVYNALVSAFCK 321
Query: 261 RGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK---PDISLY 317
K A+ +L +M GI ++ T + I+ L++ GR EAYKV + K PD Y
Sbjct: 322 AKKFENAFRVLNDMEGHGITTNSRTWNIILNHLISLGRDDEAYKVFRRMIKCCQPDCDTY 381
Query: 318 HGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
+IK + A +V++ M + P+MHT+ +L+ G KR
Sbjct: 382 TMMIKMFCENDKVEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKR 427
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 116/296 (39%), Gaps = 71/296 (23%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
N FN ++ + KS+N+ E +M R + KT+ I L L KM +
Sbjct: 169 NLAAFNSLLGALCKSKNVRKAQEIFDKMNSRFSPDAKTYSILLEGWGRAPNLPKMREVYS 228
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS---------------------- 170
M D GCE + +V +LC+ V EA ++ ++
Sbjct: 229 EMLDAGCEPDIVTYGIMVDSLCKTGRVEEAVRVVQDMTSRGCQPTTYIYSVLVHTYGVEM 288
Query: 171 --------------EWIKPNEIAYGWLIKGYCDVGDLIEA---------------SKIWN 201
+ I P+ + Y L+ +C A S+ WN
Sbjct: 289 RIEDAVATFLDMEKDGIVPDIVVYNALVSAFCKAKKFENAFRVLNDMEGHGITTNSRTWN 348
Query: 202 LM---------TDEGF----------EPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
++ DE + +P D MI+ F + +K + A+KV++ MR+K+
Sbjct: 349 IILNHLISLGRDDEAYKVFRRMIKCCQPDCDTYTMMIKMFCENDKVEMALKVWKYMRLKQ 408
Query: 243 MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR 298
+ T+ ++I+ +C + ++SQA +LE+M ++GI T + LL GR
Sbjct: 409 FLP-SMHTFSVLINGLCDKREVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKEGR 463
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 87/206 (42%), Gaps = 28/206 (13%)
Query: 218 MIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKR 277
++ + KI + V +MR R + + T+ I++ + K+ +A M K
Sbjct: 107 VVASLAKIRQYQLMWDVVAVMR--REGAVNVETFGIIMRKYARAQKVDEAVYTFNVMEKY 164
Query: 278 GIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK---PDISLYHGLIKGLLRLRRAREAT 334
G+ + +S++ L +R+A ++ +++ PD Y L++G R +
Sbjct: 165 GVVPNLAAFNSLLGALCKSKNVRKAQEIFDKMNSRFSPDAKTYSILLEGWGRAPNLPKMR 224
Query: 335 QVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKY 394
+V+ EM+ GCEP + TY I V L K G+ +A +
Sbjct: 225 EVYSEMLDAGCEPDIVTY-----------------------GIMVDSLCKTGRVEEAVRV 261
Query: 395 VERVMNRGVEVPRFDYNKFLHYYSNE 420
V+ + +RG + + Y+ +H Y E
Sbjct: 262 VQDMTSRGCQPTTYIYSVLVHTYGVE 287
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 119/226 (52%), Gaps = 6/226 (2%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEA 196
GC S+ N ++ LC+++L+ A ++ K+ + PN ++Y L+ G+C + A
Sbjct: 344 GCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRA 403
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVID 256
+ +M G P I + ++ K K D A+++ + K + L TY VID
Sbjct: 404 IEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPV-LITYNTVID 462
Query: 257 WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KP 312
+ K GK A +LEEM ++G++ D +T S+++ GL G++ EA K+ ++E KP
Sbjct: 463 GLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKP 522
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
Y+ ++ GL + ++ A M+++GC+PT TY +L++G
Sbjct: 523 SAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEG 568
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 119/253 (47%), Gaps = 35/253 (13%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+ I Y LI GYC G++ +A ++ M+ P + + ++ + K EAM+V
Sbjct: 175 PDVITYNVLIGGYCKSGEIDKALQVLERMS---VAPDVVTYNTILRSLCDSGKLKEAMEV 231
Query: 235 F--QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
QM R D + TY I+I+ C + QA +L+EM K+G + D +T + +I G
Sbjct: 232 LDRQMQRECYPDVI---TYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLING 288
Query: 293 LLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
+ GRL EA K + + +P++ ++ +++ + R +A ++ +M+++GC P+
Sbjct: 289 ICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPS 348
Query: 349 MHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRF 408
+ T+ +L+ KR G+++D +E++ G
Sbjct: 349 VVTFNILINFLCRKR--------------------LLGRAIDV---LEKMPKHGCMPNSL 385
Query: 409 DYNKFLHYYSNEE 421
YN LH + E+
Sbjct: 386 SYNPLLHGFCQEK 398
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 147/331 (44%), Gaps = 21/331 (6%)
Query: 125 KKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLI 184
+K I+ + G + N ++ C+ + +A ++ ++S + P+ + Y ++
Sbjct: 159 RKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMS--VAPDVVTYNTIL 216
Query: 185 KGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD 244
+ CD G L EA ++ + P + +IE + +AMK+ MR K+
Sbjct: 217 RSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMR-KKGC 275
Query: 245 DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK 304
+ TY ++I+ +CK G++ +A L M G + + +T + I+ + + GR +A +
Sbjct: 276 KPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAER 335
Query: 305 VVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL 360
++ ++ + P + ++ LI L R R A V +M K GC P +Y LL G
Sbjct: 336 LLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFC 395
Query: 361 GKRG------------RKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPR 407
++ +G P +V ++T+ L K GK+ A + + ++ ++G
Sbjct: 396 QEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLT-ALCKDGKADAAVEILNQLSSKGCSPVL 454
Query: 408 FDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
YN + + E+ +++R GL
Sbjct: 455 ITYNTVIDGLTKVGKTEYAAELLEEMRRKGL 485
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 101/221 (45%), Gaps = 3/221 (1%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRR-LVNDKTFKIALMTLAEVRELKKMVNFFHI 133
+TFN +++ + + R + + L++M + + N ++ L + +++ + + + I
Sbjct: 350 VTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEI 409
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGD 192
M GC + N ++ LC+ A ++ +LS + P I Y +I G VG
Sbjct: 410 MVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGK 469
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
A+++ M +G +P I ++ K DEA+K+F M + + TY
Sbjct: 470 TEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAV-TYN 528
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
++ +CK + S+A L M ++G + T + +I G+
Sbjct: 529 AIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGI 569
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 71/160 (44%), Gaps = 17/160 (10%)
Query: 293 LLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
L+ G L E K +E + + PD+ LI+G R + R+AT++ + G P
Sbjct: 117 LVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPD 176
Query: 349 MHTYIMLLQGHLG-----------KRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVER 397
+ TY +L+ G+ +R PD +V ++TI L +GK +A + ++R
Sbjct: 177 VITYNVLIGGYCKSGEIDKALQVLERMSVAPD-VVTYNTIL-RSLCDSGKLKEAMEVLDR 234
Query: 398 VMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVG 437
M R Y + N+ GV ++ ++R+ G
Sbjct: 235 QMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKG 274
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 2/117 (1%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
IT+N ++D + K + E L+EM R+ L D T+ L L ++ + + FH
Sbjct: 455 ITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHD 514
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCD 189
M + S N ++ LC+ + A +L + + KP + Y LI+G D
Sbjct: 515 MEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGIAD 571
>gi|357440039|ref|XP_003590297.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479345|gb|AES60548.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 661
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 142/312 (45%), Gaps = 8/312 (2%)
Query: 53 WRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFK 112
W+ F++ + F H+ +++ MVDI+G+ + +D E L+EM + L+ T
Sbjct: 100 WKSALAIFRWA-GSHSNFKHSQQSYDMMVDILGRMKAMDKMREILEEMRQESLITLNTIA 158
Query: 113 IALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW 172
+ R+ K V F + G E + E +N ++ TLC+ K V +A+ + L+L +
Sbjct: 159 KVMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLCKEKFVEQAREIYLELKHY 218
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
I PN + LI G+C++ + EA M G P + +I+ + + D
Sbjct: 219 IAPNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVY 278
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
+ M+ + + TY ++ + K K +A ++E M G D L +S+IY
Sbjct: 279 DLLDEMQAQNCSP-NVVTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYT 337
Query: 293 LLARGRLREAYKVV-----EEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRG-CE 346
L GR+ +A V + P+ S Y+ +I + A + +EM K G C+
Sbjct: 338 LGRAGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEKSGLCK 397
Query: 347 PTMHTYIMLLQG 358
P + TY L++
Sbjct: 398 PDIQTYHPLIKS 409
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 153/301 (50%), Gaps = 14/301 (4%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRR----RLVNDKTFKIALMTLAEVRELKKMV 128
N + +N ++D + K + ++ ++ EM R ++ T ++ E ++
Sbjct: 149 NVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLL 208
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGY 187
N + N Y+ +L + LC+ V EAK L+ ++ E +KPN ++Y L+ GY
Sbjct: 209 NEMILKNINPNVYTYTIL---MDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGY 265
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C +G++ A ++++ M +G P++ + MI+ K + DEAM + + + K M
Sbjct: 266 CLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVP-N 324
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA----Y 303
TY +ID CK G+I+ A +L+EM+ RG AD +T +S++ L L +A
Sbjct: 325 TVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFM 384
Query: 304 KVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
K+ E +P+ Y LI GL + R + A ++F+ ++ +GC + TY +++ G L K
Sbjct: 385 KMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISG-LCKE 443
Query: 364 G 364
G
Sbjct: 444 G 444
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 86/385 (22%), Positives = 171/385 (44%), Gaps = 69/385 (17%)
Query: 70 FAHNSITFNRMVD---IIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKK 126
+ N+IT N ++ + G+ + F + + G + ++ ++ L L ++ E +
Sbjct: 76 YQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQ--MDQVSYATLLNGLCKIGETRS 133
Query: 127 MVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIK 185
+ ++ D ++ M N ++ LC+ KLV EA L ++ + I PN I Y LI
Sbjct: 134 ALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIY 193
Query: 186 GYCDVGDLIEASKIWN-----------------------------------LMTDEGFEP 210
G+C G L+EA + N +MT EG +P
Sbjct: 194 GFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKP 253
Query: 211 SIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTM 270
++ + +++ + I + A ++F M V++ + + +Y I+ID +CK ++ +A +
Sbjct: 254 NVVSYNTLMDGYCLIGEVQNAKQMFHTM-VQKGVNPNVYSYNIMIDRLCKSKRVDEAMNL 312
Query: 271 LEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLR 326
L E+ + + + +T SS+I G GR+ A +++E+ + D+ Y L+ L +
Sbjct: 313 LREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCK 372
Query: 327 LRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAG 386
+ +AT +F +M +RG +P +TY T + GL K G
Sbjct: 373 NQNLDKATALFMKMKERGIQPNKYTY-----------------------TALIDGLCKGG 409
Query: 387 KSLDAAKYVERVMNRGVEVPRFDYN 411
+ +A K + ++ +G + + YN
Sbjct: 410 RHKNAQKLFQHLLVKGCRINVWTYN 434
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 144/317 (45%), Gaps = 22/317 (6%)
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLC---QRKLVVEAKYLILKLSEWI 173
+L +++ ++ F M G E L LN ++ C Q ILKL
Sbjct: 19 SLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKILKLG--Y 76
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
+PN I L+KG C G++ ++ + + +GF+ ++ KI + A+K
Sbjct: 77 QPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALK 136
Query: 234 VFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
+ +M+ R + Y +ID +CK +++AY + EM RGI + +T S++IYG
Sbjct: 137 LLRMIE-DRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGF 195
Query: 294 LARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
G+L EA+ ++ E+ P++ Y L+ L + + +EA + M K G +P +
Sbjct: 196 CLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNV 255
Query: 350 HTYIMLLQGH--LGKRG----------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVER 397
+Y L+ G+ +G+ +KG +P V I + L K+ + +A +
Sbjct: 256 VSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLRE 315
Query: 398 VMNRGVEVPRFDYNKFL 414
V+++ + Y+ +
Sbjct: 316 VLHKNMVPNTVTYSSLI 332
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 143/311 (45%), Gaps = 20/311 (6%)
Query: 146 LNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
LN ++K LC + V ++ + K+ ++ + ++++Y L+ G C +G+ A K+ ++
Sbjct: 83 LNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIE 142
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
D P++ + + +I+ K +EA ++ M + + + TY +I C G++
Sbjct: 143 DRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFP-NVITYSTLIYGFCLAGQL 201
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV----EEIEKPDISLYHGL 320
+A+ +L EM + I + T + ++ L G+++EA ++ +E KP++ Y+ L
Sbjct: 202 MEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTL 261
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR-------------KG 367
+ G + + A Q+F M+++G P +++Y +++ L K R K
Sbjct: 262 MDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMID-RLCKSKRVDEAMNLLREVLHKN 320
Query: 368 PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFE 427
P + + G K G+ A ++ + +RG Y L + +
Sbjct: 321 MVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKAT 380
Query: 428 EVGKKLREVGL 438
+ K++E G+
Sbjct: 381 ALFMKMKERGI 391
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 131/312 (41%), Gaps = 45/312 (14%)
Query: 73 NSITFNRMVDIIGKSRNI----DLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMV 128
N T+ ++D + K + +L +E + +V+ T + EV+ K+M
Sbjct: 219 NVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQM- 277
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGY 187
FH M G ++ N ++ LC+ K V EA L+ + L + + PN + Y LI G+
Sbjct: 278 --FHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGF 335
Query: 188 CDVG-----------------------------------DLIEASKIWNLMTDEGFEPSI 212
C +G +L +A+ ++ M + G +P+
Sbjct: 336 CKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNK 395
Query: 213 DVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLE 272
+I+ K + A K+FQ + VK + + TY ++I +CK G + +A M
Sbjct: 396 YTYTALIDGLCKGGRHKNAQKLFQHLLVKGCR-INVWTYNVMISGLCKEGMLDEALAMKS 454
Query: 273 EMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRARE 332
+M + G D +T II L + + +A K++ E+ D+ + G +
Sbjct: 455 KMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKDLLRFRDF-HGERSPNENDK 513
Query: 333 ATQVFREMIKRG 344
A ++ EMI +G
Sbjct: 514 AEKLLHEMIAKG 525
>gi|449442128|ref|XP_004138834.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 591
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 163/353 (46%), Gaps = 8/353 (2%)
Query: 10 RVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPC 69
++ T+L + SPE+ + +L+ + +++ Q+ F W Y F++ + P
Sbjct: 145 KISTMLENRYPSPEN-VAEALNGKAYRVSNTLVAQLLKRFHNDWIQAYGIFKWAKDQIP- 202
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGR-RRLVNDKTFKIALMTLAEVRELKKMV 128
+ H+ ++N MVDI+GK++N L WE + EM V+ +T + LA ++ +
Sbjct: 203 YRHSPESYNSMVDILGKAKNFRLMWELVDEMNHLAGSVSLETMSKVIRRLARAGRHQEAI 262
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYC 188
+ F + G +N ++ L + V +A + +L I N ++ LI GYC
Sbjct: 263 HAFRNIEKYGISTDTTAMNVLMDALVKEASVEDAHNVFRELKCSIPFNLASFNVLIHGYC 322
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
L EA KI + G EP + IE + KV M K +
Sbjct: 323 KAKKLDEAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRNVDKVLVQMEHKGCKP-NV 381
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
T+ I++ + K +I++A + E+M K G D+ SS+I+ L GRL + ++VE+
Sbjct: 382 ITFTIIMHALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIFILGKAGRLTDVKEIVED 441
Query: 309 IEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
+EK PD+ Y+ LI + A + +M + C+P + TY LL+
Sbjct: 442 MEKQGVTPDVLTYNTLISCACAHSQEETALTLLLKMEEVSCKPDLKTYHPLLK 494
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 133/297 (44%), Gaps = 43/297 (14%)
Query: 171 EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLM---TDE----GFEPSIDVVDKMIETFF 223
+W K ++I Y + Y + D++ +K + LM DE S++ + K+I
Sbjct: 195 KWAK-DQIPYRHSPESYNSMVDILGKAKNFRLMWELVDEMNHLAGSVSLETMSKVIRRLA 253
Query: 224 KINKDDEAMKVFQMMRVKRMDDLGLST----YRIVIDWMCKRGKISQAYTMLEEMFKRGI 279
+ + EA+ F + ++ G+ST +++D + K + A+ + E+ K I
Sbjct: 254 RAGRHQEAIHAF-----RNIEKYGISTDTTAMNVLMDALVKEASVEDAHNVFREL-KCSI 307
Query: 280 EADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQ 335
+ + + +I+G +L EA+K++ E+EK PD+ Y I+ R + R +
Sbjct: 308 PFNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRNVDK 367
Query: 336 VFREMIKRGCEPTMHTYIMLLQGHLGKRG-------------RKGPDPLVNFDTIFVGGL 382
V +M +GC+P + T+ +++ LGK ++G P +F + + L
Sbjct: 368 VLVQMEHKGCKPNVITFTIIMHA-LGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIFIL 426
Query: 383 VKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH---YYSNEEGVVMF----EEVGKK 432
KAG+ D + VE + +GV YN + +S EE + EEV K
Sbjct: 427 GKAGRLTDVKEIVEDMEKQGVTPDVLTYNTLISCACAHSQEETALTLLLKMEEVSCK 483
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 101/234 (43%), Gaps = 7/234 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRE--LKKMVNF 130
N +FN ++ K++ +D W+ + E+ + L D A + A RE + +
Sbjct: 310 NLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPDVISYTAFIE-AHCREKDFRNVDKV 368
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCD 189
M GC+ ++ ++ L + K + EA + K+ E P+ Y LI
Sbjct: 369 LVQMEHKGCKPNVITFTIIMHALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIFILGK 428
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGL 248
G L + +I M +G P + + +I ++++ A+ + +M V DL
Sbjct: 429 AGRLTDVKEIVEDMEKQGVTPDVLTYNTLISCACAHSQEETALTLLLKMEEVSCKPDL-- 486
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
TY ++ C++ ++ +L+ MFK + + T + ++ GL G+L A
Sbjct: 487 KTYHPLLKMFCRKKRMKVLKFLLDHMFKNDVSIEAGTYAILVRGLCENGKLHLA 540
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 93/239 (38%), Gaps = 39/239 (16%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALM-TLAEVRELKKMVNFF 131
N ITF ++ +GK++ I+ + ++M + V D +F +L+ L + L +
Sbjct: 380 NVITFTIIMHALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIFILGKAGRLTDVKEIV 439
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
M G + N ++ C A L+LK+ E KP+ Y L+K +C
Sbjct: 440 EDMEKQGVTPDVLTYNTLISCACAHSQEETALTLLLKMEEVSCKPDLKTYHPLLKMFCRK 499
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
+ K+ + D F+ + + EA T
Sbjct: 500 KRM----KVLKFLLDHMFKNDVSI---------------EA-----------------GT 523
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
Y I++ +C+ GK+ A + EM + + + T ++ L R + E K++E +
Sbjct: 524 YAILVRGLCENGKLHLACSFFGEMLSKAMVPKDSTF-KMLKEELERKSMLEEMKIIENL 581
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 146/335 (43%), Gaps = 28/335 (8%)
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIA 179
V+ L++MV+ H+ ++ L VV++LC V +A+ L+ + L + N I
Sbjct: 59 VQVLQEMVSARHVPDN-------TTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAIT 111
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
Y L+ G C L EA + M + G P++ + +I F + + DEA + M
Sbjct: 112 YSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQM- 170
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
V + TY +I CK + + +L E+ +RG D +T S++I GL GRL
Sbjct: 171 VAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRL 230
Query: 300 REAYKVVEEIE-KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
R+A + EE+ P Y+ LI G R EA ++ +M+ C P + TY L+
Sbjct: 231 RDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSA 290
Query: 359 HLGKRGRK---------------GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
K GR PD +V F T V GL G+ DA + +E + RG
Sbjct: 291 FC-KMGRLDDAYELFQQMVANKLSPD-VVTF-TSLVDGLCGEGRMEDALELLEEITRRGC 347
Query: 404 EVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
+ YN + Y V EE+ R G
Sbjct: 348 PPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGF 382
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 154/354 (43%), Gaps = 55/354 (15%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
A N+IT++ +VD + K +D ++ M R
Sbjct: 105 MAANAITYSALVDGLCKCERLDEAVALVETMAER-------------------------- 138
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYC 188
GC ++ N ++ C+ + V EA + ++ +E P+ I Y LI G+C
Sbjct: 139 --------GCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFC 190
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
D+ ++ +T GF P I +I+ K + +A+ +F+ M
Sbjct: 191 KSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPT----A 246
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY +I C+ G + +A +L +M D +T ++++ GRL +AY++ ++
Sbjct: 247 ITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQ 306
Query: 309 IE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL-GKR 363
+ PD+ + L+ GL R +A ++ E+ +RGC PT++TY ++ G+ +
Sbjct: 307 MVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQ 366
Query: 364 GRKGPDPLVNFDT-----------IFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
RK + + +F + I V G +AG++ A +Y++++ + G P
Sbjct: 367 VRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCP 420
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 115/242 (47%), Gaps = 22/242 (9%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
+ P + + +I G C G L A ++ M D P K++ K + +A+
Sbjct: 1 MNPGTLLHNVVIGGLCRAGRLRHALGVYRQMND-AHPPDFLTYTKLVHGLSKARRLRDAV 59
Query: 233 KVFQ-MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
+V Q M+ + + D +T +V+ +C ++ A ++EEM RG+ A+ +T S+++
Sbjct: 60 QVLQEMVSARHVPDN--TTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVD 117
Query: 292 GLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
GL RL EA +VE + + P + Y+ +I G R RR EA +M+ GC P
Sbjct: 118 GLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHP 177
Query: 348 TMHTYIMLLQGH------------LGKRGRKGPDP-LVNFDTIFVGGLVKAGKSLDAAKY 394
+ TY L+ G LG+ R+G P +V + T+ + GL KAG+ DA
Sbjct: 178 DIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTV-IDGLCKAGRLRDAVDI 236
Query: 395 VE 396
E
Sbjct: 237 FE 238
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 134/290 (46%), Gaps = 12/290 (4%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHI 133
IT+ ++ KSR++ E L E+ RR D T+ + L + L+ V+ F
Sbjct: 180 ITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEE 239
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGD 192
M+ C + N ++ C+ + EA L+ K+ + P+ + Y L+ +C +G
Sbjct: 240 MS---CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGR 296
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
L +A +++ M P + +++ + ++A+++ + + +R + TY
Sbjct: 297 LDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEI-TRRGCPPTIYTYN 355
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK- 311
V+D CK ++ +A ++ + RG + +T + ++ G GR +A + ++++
Sbjct: 356 CVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSE 415
Query: 312 -----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
+++Y ++ L R R +A Q + EMI+RG P T+ ++
Sbjct: 416 GGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVV 465
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 109/243 (44%), Gaps = 5/243 (2%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVN 129
A + +T+ ++ K +D +E Q+M +L D TF + L ++ +
Sbjct: 278 APDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALE 337
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYC 188
+ GC ++ N VV C+ V +A+ L+ S PN + Y L+ G C
Sbjct: 338 LLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCC 397
Query: 189 DVGDLIEASKIWNLMTDEG--FEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
G +A + + + EG S+ + +++ + + D+A++ ++ M ++R
Sbjct: 398 RAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEM-IQRGYVP 456
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
+T+ V+ +CK + QA+ +LEEM K G T +++ G +++A ++
Sbjct: 457 AAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELA 516
Query: 307 EEI 309
E+
Sbjct: 517 SEL 519
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/249 (19%), Positives = 112/249 (44%), Gaps = 13/249 (5%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK------TFKIALMTLAEVREL 124
A +IT+N ++ ++ ++D E ++ +G+ +V+DK T+ + ++ L
Sbjct: 243 APTAITYNSLIGGYCRAGDMD---EAIRLLGK--MVDDKCAPDVVTYTTLMSAFCKMGRL 297
Query: 125 KKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEI-AYGWL 183
F M + +V LC + +A L+ +++ P I Y +
Sbjct: 298 DDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCV 357
Query: 184 IKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM 243
+ GYC + +A ++ GF P+ + ++ + + D+A++ + +
Sbjct: 358 VDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGG 417
Query: 244 D-DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
++ Y I++D +C+ G+ A EEM +RG T +++++ L + ++A
Sbjct: 418 PCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQA 477
Query: 303 YKVVEEIEK 311
++++EE+ K
Sbjct: 478 HELLEEMIK 486
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 189/411 (45%), Gaps = 23/411 (5%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMV 128
+ + I+++ +++ + +D W+ +++M ++ L N T+ + L + +L +
Sbjct: 700 YTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAE 759
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGY 187
F M G + +V C+R + A ++ S I P+ + Y +I G+
Sbjct: 760 EAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 819
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C +GD++EA K+++ M G EP I +++ + K +A +V M ++
Sbjct: 820 CQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHM-IQAGCSPN 878
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
+ TY +ID +CK G + A +L EM+K G++ + T +SI+ GL G + EA K+V
Sbjct: 879 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 938
Query: 308 EIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
E E D Y L+ + +A ++ EM+ +G +PT+ T+ +L+ G
Sbjct: 939 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHG 998
Query: 364 GRKGPDPLVNF--------DTIFVGGLVKA---GKSLDAAKYVERVM-NRGVEVPRFDYN 411
+ + L+N+ + LVK +L AA + + M +RGVE Y
Sbjct: 999 MLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYE 1058
Query: 412 KFLHYYSN----EEGVVMFEEVGKKLREVGLADLADIFQRYGKKMATRERR 458
+ + N +E +F+E+ K V ++ + + + + K+ E R
Sbjct: 1059 NLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAR 1109
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 165/386 (42%), Gaps = 42/386 (10%)
Query: 88 RNIDLFWETLQEMG---RRRLVNDKTFKIALMTLAE-----VRELKKMVN-------FFH 132
R D+F++ L E G R V +K L+ + + L K N F
Sbjct: 599 RVFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFR 658
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVG 191
+ G +++ N V+ +CQ + EA +L+L + + P+ I+Y +I GYC G
Sbjct: 659 EFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFG 718
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLST 250
+L + K+ M +G +P+ +I +I K EA + F +M+ + D
Sbjct: 719 ELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPD--TIV 776
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI- 309
Y ++D CKRG I A EM R I D LT ++II G G + EA K+ E+
Sbjct: 777 YTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEML 836
Query: 310 ---EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG-- 364
+PDI + L+ G + ++A +V MI+ GC P + TY L+ G L K G
Sbjct: 837 CRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDG-LCKEGDL 895
Query: 365 -----------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
+ G P + V GL K+G +A K V G+ Y
Sbjct: 896 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 955
Query: 414 LHYYS-----NEEGVVMFEEVGKKLR 434
+ Y ++ ++ E +GK L+
Sbjct: 956 MDAYCKSGEMDKAQEILTEMLGKGLQ 981
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 112/243 (46%), Gaps = 6/243 (2%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
N T+ + L + +L H M G + ++ N +V LC+ + EA L+
Sbjct: 878 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 937
Query: 167 LKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI 225
+ + + + + Y L+ YC G++ +A +I M +G +P+I + ++ F
Sbjct: 938 GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLH 997
Query: 226 NKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
++ K+ M K + +T+ ++ C R + A + ++M RG+E D T
Sbjct: 998 GMLEDGEKLLNWMLAKGIAP-NATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKT 1056
Query: 286 LSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMI 341
+++ G ++EA+ + +E++ +S Y LIKG + ++ EA ++F +M
Sbjct: 1057 YENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMR 1116
Query: 342 KRG 344
+ G
Sbjct: 1117 RDG 1119
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/259 (18%), Positives = 114/259 (44%), Gaps = 3/259 (1%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMT 117
F + Q + N +T+ ++D + K ++D E L EM + L N T+ +
Sbjct: 864 FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNG 923
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPN 176
L + +++ V G ++ C+ + +A+ ++ + L + ++P
Sbjct: 924 LCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPT 983
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
+ + L+ G+C G L + K+ N M +G P+ + +++ + N A +++
Sbjct: 984 IVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYK 1043
Query: 237 MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR 296
M + ++ G TY ++ C + +A+ + +EM +G T S +I G R
Sbjct: 1044 DMCSRGVEPDG-KTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKR 1102
Query: 297 GRLREAYKVVEEIEKPDIS 315
+ EA ++ +++ + ++
Sbjct: 1103 KKFVEAREIFDQMRRDGLA 1121
>gi|356549285|ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Glycine max]
Length = 479
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 131/258 (50%), Gaps = 9/258 (3%)
Query: 109 KTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK 168
K + L L E +K+ + F+ M + G S+ LN ++K LC+ K V++ I +
Sbjct: 121 KAYLTILDILVEENHVKRAIGFYREMRELGIPSSVVSLNILIKALCKNKETVDSALRIFQ 180
Query: 169 --LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKIN 226
+ +P+ YG LI G C +G++ EA +++ M +GF S+ +I + N
Sbjct: 181 EMPNRGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSN 240
Query: 227 KDDEAMKVFQMMRVKRMD-DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
DEA+ + + M KR D + + TY ++D +CK G SQA +LE M K+ + +T
Sbjct: 241 NLDEAIGLLEEM--KRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVT 298
Query: 286 LSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMI 341
S++I GL +LREA ++++ + KP+ LY +I GL +EA EM+
Sbjct: 299 YSTLINGLCKERKLREAVEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEAANFIDEMV 358
Query: 342 KRGCEPTMHTYIMLLQGH 359
G P ++ + ++ H
Sbjct: 359 LGGISPNRASWSLHVRMH 376
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 162/360 (45%), Gaps = 25/360 (6%)
Query: 75 ITFNRMVDIIGKSRNI----DLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNF 130
IT + +V +I +++ ++F E G + +TF + + L V + +
Sbjct: 13 ITNSLVVQLIKAEKDVHKAVNMFDSATAEYGNGFRHDHETFGLIISRLVTVNQFRPAEGM 72
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCD 189
M C + ++ + + + ++A + K+ + ++P + AY ++ +
Sbjct: 73 LERMKQEKCMVTEDIFLSICRGYGRVHRPLDAIRVFHKMEGFQLRPTQKAYLTILDILVE 132
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD--DEAMKVFQMMRVKRMDDLG 247
+ A + M + G S+ ++ +I+ K NK+ D A+++FQ M R
Sbjct: 133 ENHVKRAIGFYREMRELGIPSSVVSLNILIKALCK-NKETVDSALRIFQEMP-NRGCQPD 190
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
TY +I+ +C+ G IS+A + +EM ++G A +T +S+I+GL L EA ++E
Sbjct: 191 SYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIGLLE 250
Query: 308 EIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
E+++ P++ Y L+ GL + + +A Q+ M K+ P M TY L+ G +R
Sbjct: 251 EMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLINGLCKER 310
Query: 364 GRK------------GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
+ G P + GL AG +AA +++ ++ G+ R ++
Sbjct: 311 KLREAVEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEAANFIDEMVLGGISPNRASWS 370
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 116/254 (45%), Gaps = 13/254 (5%)
Query: 58 LFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALM 116
LF + QK F+ + +T+ ++ + +S N+D L+EM R + N T+ +
Sbjct: 213 LFKEMEQKG---FSASVVTYTSLIHGLCQSNNLDEAIGLLEEMKRNDIEPNVFTYSSLMD 269
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKP 175
L + + + +M+ ++ + ++ LC+ + + EA ++ ++ + +KP
Sbjct: 270 GLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLINGLCKERKLREAVEILDRMRIQGLKP 329
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPS-------IDVVDKMIETFFKINKD 228
N YG +I G C G EA+ + M G P+ + + + +++
Sbjct: 330 NAGLYGKIISGLCAAGSYQEAANFIDEMVLGGISPNRASWSLHVRMHNMVVQGLCNNVDP 389
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
A +++ MR R + + T+ ++ CKRG + +A +LEEM G D +
Sbjct: 390 PRAFQLYLSMRT-RCISVEIDTFDCLVKCFCKRGDLHKAARILEEMVLDGCIPDEGVWNV 448
Query: 289 IIYGLLARGRLREA 302
+I GL R ++REA
Sbjct: 449 VIGGLWDRKKVREA 462
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 170/362 (46%), Gaps = 34/362 (9%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVN 129
+ N++ +N +++ + K NI+ ++ L+EM + D T+ L L + ++ +
Sbjct: 77 SANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVSEAKQ 136
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL---SEWIKPNEIAYGWLIKG 186
FF M G + N ++ L + V EA L + + P+ I Y LI G
Sbjct: 137 FFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDG 196
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
+C V EA K++ + +G+ P + ++ + + DEA ++F K+M D
Sbjct: 197 FCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMF-----KKMVDS 251
Query: 247 GL----STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
G +TY IV+ C+ G +++ + EEM ++ D L +++I L ++ +A
Sbjct: 252 GCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDA 311
Query: 303 YKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+KV+EE+ K PD+ Y+ L+ GL + +A ++F M+ GC P + +Y ++L G
Sbjct: 312 HKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNG 371
Query: 359 HLGKRGRKGPDPLVNFD--------------TIFVGGLVKAGKSLDAAKYVERVMNRGVE 404
+ K D V FD I + GL KAGK LD AK + VM+
Sbjct: 372 LC--KTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGK-LDEAKDLLDVMSEHNV 428
Query: 405 VP 406
+P
Sbjct: 429 LP 430
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 130/270 (48%), Gaps = 26/270 (9%)
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
+P+ + Y +I G C G + EA ++ MT++G P + +++ + K DEA +
Sbjct: 7 EPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADE 66
Query: 234 VFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
+F M ++R Y +I+ +CK I +AY +LEEM +G E DN+T ++I+ GL
Sbjct: 67 LFHKM-IERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGL 125
Query: 294 LARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
G++ EA + + + PD+ Y+GL+ L + + EA +F+ M
Sbjct: 126 CRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTM--------- 176
Query: 350 HTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFD 409
+ R + PD L+ ++T+ + G + K+ +A K + V+ +G
Sbjct: 177 ---------DMADR-KVAPD-LITYNTL-IDGFCRVEKTDEAMKLFKDVIAKGYMPDTVT 224
Query: 410 YNKFLHYYSNEEGVVMFEEVGKKLREVGLA 439
YN L + + + EE+ KK+ + G A
Sbjct: 225 YNSILLGLARKSNMDEAEEMFKKMVDSGCA 254
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 155/364 (42%), Gaps = 46/364 (12%)
Query: 66 AQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVREL 124
A+ F + +T++ ++ + K+ + E ++EM + + D T+ I + L ++
Sbjct: 2 AEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKV 61
Query: 125 KKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWL 183
+ FH M + GC + N ++ LC+ + + A L+ ++ S+ +P+ I Y +
Sbjct: 62 DEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTI 121
Query: 184 IKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK-R 242
+ G C +G + EA + ++ M G+ P + + +++ +K K EA +F+ M + R
Sbjct: 122 LSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADR 181
Query: 243 MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
L TY +ID C+ K +A + +++ +G
Sbjct: 182 KVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGY----------------------- 218
Query: 303 YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH--L 360
PD Y+ ++ GL R EA ++F++M+ GC P TY ++L GH +
Sbjct: 219 --------MPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRV 270
Query: 361 GKRGR----------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY 410
G R K P V + L KA K DA K +E + G Y
Sbjct: 271 GNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTY 330
Query: 411 NKFL 414
N L
Sbjct: 331 NILL 334
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 84/385 (21%), Positives = 174/385 (45%), Gaps = 34/385 (8%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMV 128
+ +++T+N ++ + + N+D E ++M N T+ I L V + + +
Sbjct: 218 YMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCL 277
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGY 187
+ M + + + N V+ LC+ K V +A ++ ++S+ P+ + Y L+ G
Sbjct: 278 ELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGL 337
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C + +A ++++ M D G P I ++ K NK +A +F M ++R
Sbjct: 338 CKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRM-IERKLVPD 396
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV-- 305
+ T+ I++D +CK GK+ +A +L+ M + + D +T +++++GL R EA ++
Sbjct: 397 VVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQ 456
Query: 306 --VEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE--PTMHTYIMLLQGHLG 361
VE+ D+ ++ ++ GL R + +A F+ M+K E P + TY
Sbjct: 457 YMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTY--------- 507
Query: 362 KRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEE 421
T V L++AG+ A Y +++ G YN ++ +
Sbjct: 508 --------------TTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQG 553
Query: 422 GVVMFEEVGKKLREVGLADLADIFQ 446
+ + + + ++E G L+D F+
Sbjct: 554 RHIQADRLTQAMKEKGF--LSDCFK 576
>gi|297839201|ref|XP_002887482.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333323|gb|EFH63741.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 490
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/468 (22%), Positives = 203/468 (43%), Gaps = 35/468 (7%)
Query: 26 LHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIG 85
+ +L +LT +I + + FF + Q ++H I +N M+DI+
Sbjct: 10 MEKALDDSVVDLTTPVVCKILQRLQYEEKTAFRFFTWAGH-QEHYSHEPIAYNEMIDILS 68
Query: 86 ----KSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMN------ 135
K++ + + L M R N KT A + L +R+ + H+
Sbjct: 69 STKYKNKQFRIVIDMLDYMKR----NKKTVVPADILLEILRKYCERY-LTHVQKFAKRKR 123
Query: 136 -DCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLI 194
+ + N ++ LC+ LV E + L+ ++ +KP+ + L G+C V D
Sbjct: 124 IRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDATTFNVLFFGWCRVRDPK 183
Query: 195 EASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR--MDDLGLSTYR 252
+A K+ M G +P I+TF + DEA +F+ M K + T+
Sbjct: 184 KAMKLLEEMIQAGHKPENFTYCAAIDTFCQAGMVDEAADLFEFMITKGSVVSAPTAKTFA 243
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK- 311
++I + K K + + ++ M G D T +I G+ G++ EAYK ++E+
Sbjct: 244 LMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAGKVEEAYKFLDEMSNK 303
Query: 312 ---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGP 368
PDI Y+ ++ L R++ EA +++ M++ C P++ TY ML+ G
Sbjct: 304 GYPPDIVTYNCFLRVLCENRKSDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGA 363
Query: 369 ----------DPLVNFDT--IFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHY 416
D + + +T + + GL ++ +A +E V+N+G+++P ++ FL
Sbjct: 364 FNTWKEMDERDCVQDIETYCVMINGLFDCHRAKEACFLLEEVVNKGLKLPYRAFDSFLMR 423
Query: 417 YSNEEGVVMFEEVGKKLREVGLADLADIFQRYGKKMATRERRRNRAIE 464
S + ++ + +++ +A F K+ +T+ R + ++ E
Sbjct: 424 LSTVGNLKAIHKLSEHMKKFYNHSMARRFALSEKRKSTKLRGKFKSQE 471
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 165/364 (45%), Gaps = 23/364 (6%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N T+ MVD + K R +D L EM + LV T+ + E ++ +
Sbjct: 353 NVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEIL 412
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDV 190
+M C + N+++ +RK V +A L+ K+ E + P+ + Y LI C
Sbjct: 413 GLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKA 472
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G A K+ +L+ + G P I+T K + +EA +F ++ K + +
Sbjct: 473 GHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEV-M 531
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y +ID CK GKI +A ++LE M ++ T +S+IYG+ G+++E +VE +
Sbjct: 532 YTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMS 591
Query: 311 ----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL---------- 356
KP ++ Y LI+ +LR A +VF +M+ G +P ++TY +
Sbjct: 592 KMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVK 651
Query: 357 --QGHLGKRGRKG--PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNK 412
+G + + G PD L T+ + + G + DA ++R+++ G + +N
Sbjct: 652 EAEGMMARMIEAGVMPDSLTY--TLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNN 709
Query: 413 FLHY 416
+ Y
Sbjct: 710 LIWY 713
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 153/349 (43%), Gaps = 22/349 (6%)
Query: 109 KTFKIALMTL-AEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLIL 167
+T+ + + L R L+ M + F+ M + CE ++ +V +C+ + + E++ ++
Sbjct: 320 RTYTVIIHALFGNDRNLEGM-DLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILN 378
Query: 168 KLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKIN 226
++ E + P+ + Y LI+GYC+ G + A +I LM P+ +++I F K
Sbjct: 379 EMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRK 438
Query: 227 KDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTL 286
+AM + M ++ L TY +I CK G AY +L+ + + G+ D T
Sbjct: 439 HVHKAMTLLSKMLESKLTP-SLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTY 497
Query: 287 SSIIYGLLARGRLREAYKVVEEIEKPDIS----LYHGLIKGLLRLRRAREATQVFREMIK 342
S I L R+ EA + +++ I +Y LI G + + EA + M
Sbjct: 498 SVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHS 557
Query: 343 RGCEPTMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSL 389
C P TY L+ G + K G+ G P V TI + +++ G
Sbjct: 558 EDCLPNSSTYNSLIYG-VCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFD 616
Query: 390 DAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
A + ++++ G + + Y F+H Y V E + ++ E G+
Sbjct: 617 HANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGV 665
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 103/478 (21%), Positives = 195/478 (40%), Gaps = 93/478 (19%)
Query: 22 PESRLHSSLSSCNFNLTHEFFLQICNNFP-LSWRPVYLFFQYTQKAQPCFAHNSITFNRM 80
P+ + H S NL+ + NN P L+ FF +P F H + + +
Sbjct: 67 PKWQRHPSFQKLIPNLSPSHVSSLFNNHPDLNPNIALQFFNSLPLIKPGFKHTVKSHSFL 126
Query: 81 VDIIGKSR--------------------NIDLFWETLQEMGRRRLVNDKTFKIA------ 114
+ I+ + +I + L++M R ND FK++
Sbjct: 127 LKILIPNNLFGVGEKIRISMIKACVSVDDIRFLLDFLRQMNRDD--NDIKFKLSVRSYNE 184
Query: 115 -LMTLAE---VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS 170
LM LA + E+K++ + ++ND ++ LN +V + +VEA + K+
Sbjct: 185 LLMMLARFLMIDEMKRV--YTEMLNDMIVP-NIYTLNTMVNAYSKMGNIVEANLYVSKIF 241
Query: 171 EW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT------------------------D 205
+ + P+ Y LI GYC D+ A K++N+M D
Sbjct: 242 QAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRID 301
Query: 206 EGFE-----------PSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIV 254
EG P++ +I F +++ E M +F MR +R + + TY ++
Sbjct: 302 EGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMR-ERSCEPNVHTYTVM 360
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE---- 310
+D MCK K+ ++ +L EM ++G+ +T +++I G GR+ A +++ +E
Sbjct: 361 VDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNC 420
Query: 311 KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ-----GH------ 359
+P+ Y+ LI G + + +A + +M++ P++ TY L+ GH
Sbjct: 421 RPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYK 480
Query: 360 ---LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
L K PD ++F+ L K+ + +A + +G++ Y +
Sbjct: 481 LLDLLKENGLVPDQWTY--SVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALI 536
>gi|186495472|ref|NP_177628.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|133778904|gb|ABO38792.1| At1g74900 [Arabidopsis thaliana]
gi|332197524|gb|AEE35645.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 453
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 166/372 (44%), Gaps = 22/372 (5%)
Query: 36 NLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWE 95
NL + ++ N+ P + + FF + + H++ +F+ +DI + W
Sbjct: 57 NLVNSVLKRLWNHGPKALQ----FFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWS 112
Query: 96 TLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLC 154
+ M R+ + KTF I A + K V F M++ GC L N ++ LC
Sbjct: 113 LIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLC 172
Query: 155 QRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDV 214
+ K V +A L L + + Y ++ G+C + +A ++ M + G P++
Sbjct: 173 KSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTT 232
Query: 215 VDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEM 274
+ M++ FF+ + A + F M+ KR ++ + TY V+ G+I +A + +EM
Sbjct: 233 YNTMLKGFFRAGQIRHAWEFFLEMK-KRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEM 291
Query: 275 FKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRA 330
+ G+ T +++I L + + A + EE+ + P+++ Y+ LI+GL
Sbjct: 292 IREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEF 351
Query: 331 REATQVFREMIKRGCEPTMHTYIMLLQGH---------LGKRGRKGP-DPLVNFDT--IF 378
++ + M GCEP TY M+++ + LG + G D L N DT I
Sbjct: 352 SRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNIL 411
Query: 379 VGGLVKAGKSLD 390
+ G+ +S D
Sbjct: 412 ISGMFVRKRSED 423
>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
Length = 757
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 157/351 (44%), Gaps = 30/351 (8%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
N +T+ ++D + K++ +D Q M + + N+ T+ + + + K++V
Sbjct: 201 NVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQML 260
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDV 190
M+ G + + ++ LC+ EA+ + + + IKPN YG L+ GY
Sbjct: 261 QEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATE 320
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G L E +LM G P + + M + K DEAM +F MR +R+ + T
Sbjct: 321 GSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSP-NIVT 379
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA----YKVV 306
Y +ID +CK G++ A +M G+ D SS++YGL + +A ++V+
Sbjct: 380 YGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVL 439
Query: 307 EEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK 366
++ + D ++ L+ L R R EA ++ M++ G P + +Y L+ GH
Sbjct: 440 DQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGH------- 492
Query: 367 GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
G+ +AAK ++ +++ G++ + YN LH Y
Sbjct: 493 ----------------CLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGY 527
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 106/206 (51%), Gaps = 16/206 (7%)
Query: 165 LILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKI-WNLMTDEGFEPSIDVVDKMIETFF 223
LILK + W + + + L+KG CD + EA+ I M + G P + +++ F
Sbjct: 117 LILK-TGWRVNDTVIFSQLLKGLCDAKRVDEATDILLRRMPEFGCTPDVFSYSILLKGFC 175
Query: 224 KINKDDEAMKVFQMMRVKRMDDLGLS------TYRIVIDWMCKRGKISQAYTMLEEMFKR 277
+ +EA+++ MM DD S TY VID +CK + +A + + M +
Sbjct: 176 NEKRAEEALELLSMM----ADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDK 231
Query: 278 GIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREA 333
G+ +N T + +I+G L+ G+ +E ++++E+ +PD +Y L+ L + R EA
Sbjct: 232 GVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEA 291
Query: 334 TQVFREMIKRGCEPTMHTYIMLLQGH 359
+F +I++G +P + Y +LL G+
Sbjct: 292 RNIFDSVIRKGIKPNVTIYGILLHGY 317
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 139/317 (43%), Gaps = 44/317 (13%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N +T+ ++D + K +D +M + D F + L V + +K F
Sbjct: 376 NIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELF 435
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDV 190
+ D G N ++ LC+ V+EA+ LI L L ++P+ I+Y L+ G+C
Sbjct: 436 FEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLT 495
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G + EA+K+ +++ G +P DK+ T
Sbjct: 496 GRIDEAAKLLDVIVSIGLKP-----DKV-------------------------------T 519
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA----YKVV 306
Y ++ CK +I AY++ EM +G+ D +T ++I++GL GR EA ++
Sbjct: 520 YNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMI 579
Query: 307 EEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK 366
+ +I Y+ +I GL + EA ++F + + + + T +++ G L K GRK
Sbjct: 580 NSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMI-GALLKGGRK 638
Query: 367 GPDPLVNFDTIFVGGLV 383
D + F TI GLV
Sbjct: 639 -EDAMDLFATISAYGLV 654
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/336 (19%), Positives = 131/336 (38%), Gaps = 56/336 (16%)
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE----WIKPNEIAYGWLIKGYCD 189
M + GC + + ++K C K EA L+ +++ PN + Y +I G C
Sbjct: 155 MPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCK 214
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
+ A ++ M D+G P+ +I + I K E +++ Q M +
Sbjct: 215 AQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQP-DCY 273
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY------ 303
Y +++D++CK G+ ++A + + + ++GI+ + +++G G L E +
Sbjct: 274 IYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLM 333
Query: 304 ---------------------------------KVVEEIEKPDISLYHGLIKGLLRLRRA 330
K+ ++ P+I Y LI L +L R
Sbjct: 334 VGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRV 393
Query: 331 REATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPL--------VNFDTIFVG-- 380
+A F +MI G P + + L+ G + + L + DT+F
Sbjct: 394 DDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTL 453
Query: 381 --GLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
L + G+ ++A + ++ ++ GV YN +
Sbjct: 454 MCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLV 489
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 114/297 (38%), Gaps = 52/297 (17%)
Query: 144 EMLNKVVKTLCQR--KLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIW 200
++L V + C +LVV +I + S + P+ Y LI +C +G L +
Sbjct: 56 QLLTAVSRARCSSASELVVSLFNRMIRECSIKVAPSSFTYTILIGCFCRMGRLKHGFAAF 115
Query: 201 NLMTDEGFEPSIDVV-DKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVI 255
L+ G+ + V+ ++++ + DEA + ++RM + G + +Y I++
Sbjct: 116 GLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDIL----LRRMPEFGCTPDVFSYSILL 171
Query: 256 DWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDIS 315
C + +A +L M G + P++
Sbjct: 172 KGFCNEKRAEEALELLSMMADDG----------------------------DGSHTPNVV 203
Query: 316 LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG------------KR 363
Y +I GL + + A VF+ MI +G P HTY L+ G+L +
Sbjct: 204 TYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEM 263
Query: 364 GRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE 420
G P + + L K G+ +A + V+ +G++ Y LH Y+ E
Sbjct: 264 STHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATE 320
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 114/268 (42%), Gaps = 3/268 (1%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
I++N +VD + ID + L + L DK T+ L + R + + F
Sbjct: 483 ISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFRE 542
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGD 192
M G + N ++ L Q EAK L L + + + N Y +I G C
Sbjct: 543 MLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNF 602
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ EA K+++ + + + I + MI K + ++AM +F + + + TY
Sbjct: 603 VDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVP-DVETYC 661
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP 312
++ + + K G + + + M + G ++ L++++ LL RG + A + ++++
Sbjct: 662 LIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDINRAGAYLSKLDEK 721
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREM 340
+ SL L+ + E Q+ + +
Sbjct: 722 NFSLEASTTSMLISIYSRGEYQQLAKSL 749
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 178/380 (46%), Gaps = 30/380 (7%)
Query: 64 QKAQPCF-------AHNSITFNRMVDIIGKSRNIDLFWETLQEM--GRRRLVNDKTFKIA 114
++A CF A N T+N +V+ + K+R +E L+EM G+ + T+
Sbjct: 24 KQALACFEKMREFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTV 83
Query: 115 LMTLAEVRELKKMVNFF-HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EW 172
+ + E+ + ++ G + VV LC+ + A ++ ++ +
Sbjct: 84 INGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKG 143
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWN-LMTDEGFEPSIDVVDKMIETFFKINKDDEA 231
++P++ + LI G+C+ + EA K++ ++T ++P + +I+ F K ++A
Sbjct: 144 VEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKA 203
Query: 232 MKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
MK+ +M ++ + TY ++ +CK G + QA + M +G + +T +++I+
Sbjct: 204 MKMLGVMEGRKCVP-NVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIH 262
Query: 292 GLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
GL A ++ A +++E+ PD Y+ L+ G RL R EA Q+F+EM + C P
Sbjct: 263 GLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLP 322
Query: 348 TMHTYIMLLQGHLGK-------------RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKY 394
TY L++G + G DP V +I V G +A + ++AA++
Sbjct: 323 DRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEF 382
Query: 395 VERVMNRGVEVPRFDYNKFL 414
++ ++ R V Y+ +
Sbjct: 383 IQEMIARNVAPNAVTYSSLI 402
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 143/297 (48%), Gaps = 7/297 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALMTLAEVRELKKMVNFFHI 133
+T+ ++D KS N++ + L M GR+ + N T+ L L + +L + ++ F
Sbjct: 185 VTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRR 244
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M GC ++ ++ LC V A+ L+ +++ P+ ++Y L+ GYC +G
Sbjct: 245 MTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGR 304
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ EA +++ M + P ++ F ++ +EA + + M+ D + TY
Sbjct: 305 IEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYS 364
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI--- 309
IV+ + + +A ++EM R + + +T SS+I GL GR+ A +V++ +
Sbjct: 365 IVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNK 424
Query: 310 -EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
+P + ++ +I L RL EA ++ M G EP M TY LL+G + GR
Sbjct: 425 RVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEG-FSRTGR 480
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 139/318 (43%), Gaps = 26/318 (8%)
Query: 139 CEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASK 198
C+ ++ ++ C+ + +A K+ E++ PNE Y ++ G C +A +
Sbjct: 3 CQPTVVTWTIIIDGFCKANQLKQALACFEKMREFVAPNERTYNVVVNGLCKARLTSKAYE 62
Query: 199 IWNLMTD-EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDW 257
+ M D + P + +I F K + D A ++ + M + + TY V+D
Sbjct: 63 VLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDG 122
Query: 258 MCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-----KP 312
+C+ GK+ +A M+ EM +G+E D T S++I G ++ EA K+ +EI KP
Sbjct: 123 LCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKP 182
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG-------- 364
D+ Y LI G + +A ++ M R C P + TY LL G L K G
Sbjct: 183 DVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHG-LCKAGDLDQALDL 241
Query: 365 -----RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP-RFDYNKFLHYYS 418
KG P V T + GL A K +DAA+ + M P YN L Y
Sbjct: 242 FRRMTSKGCVPNVVTYTTLIHGLCAAHK-VDAARLLMDEMTATCCPPDTVSYNALLDGYC 300
Query: 419 N----EEGVVMFEEVGKK 432
EE +F+E+ K
Sbjct: 301 RLGRIEEAKQLFKEMATK 318
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 151/364 (41%), Gaps = 49/364 (13%)
Query: 58 LFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT 117
LF + T K N +T+ ++ + + +D + EM D AL+
Sbjct: 241 LFRRMTSKG---CVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLD 297
Query: 118 ----LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI--LKLSE 171
L + E K++ F M C +V+ C + EA++L+ +K +
Sbjct: 298 GYCRLGRIEEAKQL---FKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAA 354
Query: 172 WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEA 231
I P+ + Y ++ GY +EA++ M P+ +I+ K + D A
Sbjct: 355 GIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHA 414
Query: 232 MKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
M+V + M KR++ + T+ VI +C+ G + +A+ +L M G+E +T ++++
Sbjct: 415 MEVLKNMVNKRVEP-SVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLE 473
Query: 292 GLLARGRLREAYKVVEEIEK------------PDISLYHGLIKGLLRLRRAREATQVFRE 339
G GR+ AY++ E + K P+ + LI+GL + R +A V E
Sbjct: 474 GFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPE-QAFSALIRGLCKAREIDKAMAVVEE 532
Query: 340 MIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVM 399
+ R CEP + + V GL++AG++ +A K + +
Sbjct: 533 LRSRECEPAEEDCLAI-----------------------VDGLLRAGRTEEAGKLINSIS 569
Query: 400 NRGV 403
G+
Sbjct: 570 KVGL 573
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 163/360 (45%), Gaps = 34/360 (9%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALMTLAEVRELKKMV 128
F +T++ ++D + + +D + L+EM GR N T+ + L K+
Sbjct: 97 FRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAF 156
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK----LSEWIKPNEIAYGWLI 184
+ M GC L ++K LC+ +EA + ++ + + P+ I + ++
Sbjct: 157 SLLEQMAANGCPPELITFGLIIKGLCKEG-EIEAAFRVVDEMFMIESGLSPDVITFNSVL 215
Query: 185 KGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD 244
G C +++A ++ + G P++ +I+ K+ K DEA+++ +M
Sbjct: 216 DGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLA-----KMV 270
Query: 245 DLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
+LG TY V+D + K G++ A +L +M G D +T +++I G R RLR
Sbjct: 271 ELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLR 330
Query: 301 EAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
EA ++ E+ + P + Y L GL R R EA ++ M RGC P TY ++
Sbjct: 331 EAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIV 390
Query: 357 QGHLGKRGR--------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
G L K GR + P V + + GL KAGK +A +++ER++ G
Sbjct: 391 DG-LCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAG 449
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 172/377 (45%), Gaps = 30/377 (7%)
Query: 54 RPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNID----LFWETLQEMGRRRLVNDK 109
+ Y F+ +A+ C +T+N M+D + K I+ L+ + G R V
Sbjct: 47 KEAYDLFE-EARAKGCHP-TVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTV--V 102
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T+ + L E+ K M GC + N +V L + EA L+ ++
Sbjct: 103 TYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQM 162
Query: 170 SEWIKPNE-IAYGWLIKGYCDVGDLIEASKIWN--LMTDEGFEPSIDVVDKMIETFFKIN 226
+ P E I +G +IKG C G++ A ++ + M + G P + + +++ K
Sbjct: 163 AANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQ 222
Query: 227 KDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTL 286
+ +A VF+ ++R + TY +ID + K K+ +A +L +M + G A+ +T
Sbjct: 223 RILDAHNVFKRA-LERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTY 281
Query: 287 SSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIK 342
S+++ GLL GR+ +A V+ ++ PD Y+ LI G + +R REA + REM++
Sbjct: 282 STVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLE 341
Query: 343 RGCEPTMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSL 389
G P++ TY L G L + GR +G P + V GL KAG+
Sbjct: 342 AGFHPSVVTYTTLCHG-LCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVT 400
Query: 390 DAAKYVERVMNRGVEVP 406
+A Y E++ V P
Sbjct: 401 EALGYFEKMARDEVVAP 417
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 132/296 (44%), Gaps = 10/296 (3%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQ---EMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
N +T++ ++D + K +D + L E+G R N T+ + L +V ++ V
Sbjct: 242 NVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCR--ANTVTYSTVVDGLLKVGRMEDAVV 299
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYC 188
M D GC N ++ +R+ + EA L+ ++ E P+ + Y L G C
Sbjct: 300 VLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLC 359
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
G EA +I + M G P+ +++ K + EA+ F+ M + +
Sbjct: 360 RSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHV 419
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
Y +ID +CK GKI +AY LE M + G D +T S +I GL GR+ ++
Sbjct: 420 IAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRG 479
Query: 309 IEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL 360
+ + PD+ Y L+ L R R EA +F++M G P T ++ G L
Sbjct: 480 MAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLL 535
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 138/295 (46%), Gaps = 11/295 (3%)
Query: 80 MVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIMNDCG 138
M+D + KSR +D ++M + + D T+ + L + R +K+ + F G
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60
Query: 139 CEYSLEMLNKVVKTLCQRKLVVEAKYLI--LKLSEWIKPNEIAYGWLIKGYCDVGDLIEA 196
C ++ N ++ LC+ + A L + + +P + Y LI G C ++ +
Sbjct: 61 CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVID 256
K+ M G P+ + ++ + EA + + M L T+ ++I
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPP-ELITFGLIIK 179
Query: 257 WMCKRGKISQAYTMLEEMF--KRGIEADNLTLSSIIYGLLARGRLREAYKV----VEEIE 310
+CK G+I A+ +++EMF + G+ D +T +S++ GL R+ +A+ V +E
Sbjct: 180 GLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGC 239
Query: 311 KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
+P++ Y LI GL ++ + EA Q+ +M++ GC TY ++ G L K GR
Sbjct: 240 RPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLL-KVGR 293
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 140/329 (42%), Gaps = 66/329 (20%)
Query: 149 VVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEG 207
++ LC+ + V +A L ++ + I P+ + YG LI G + EA ++ +G
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60
Query: 208 FEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQA 267
P++ + MI+ K + + A+ ++ M + + TY +ID +C+ ++ +
Sbjct: 61 CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120
Query: 268 YTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE-------------------- 307
+LEEM RG + +T ++++ LL +GR +EA+ ++E
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180
Query: 308 -----EIE----------------KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
EIE PD+ ++ ++ GL + +R +A VF+ ++RGC
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCR 240
Query: 347 PTMHTYIMLLQG------------------HLGKRGRKGPDPLVNFDTIFVGGLVKAGKS 388
P + TY L+ G LG R V + T+ V GL+K G+
Sbjct: 241 PNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANT-----VTYSTV-VDGLLKVGRM 294
Query: 389 LDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
DA + ++ + G YN + +
Sbjct: 295 EDAVVVLRQMRDAGCLPDAVTYNTLIDGF 323
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 107/242 (44%), Gaps = 10/242 (4%)
Query: 73 NSITFNRMVDIIGKSRN----IDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMV 128
+++T+N ++D K + + L E L+ +V T+ L + V
Sbjct: 312 DAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVV---TYTTLCHGLCRSGRFDEAV 368
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS--EWIKPNEIAYGWLIKG 186
M GC + + +V LC+ V EA K++ E + P+ IAY LI G
Sbjct: 369 EILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDG 428
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
C G + EA + M G P + +I + D +++F+ M +R
Sbjct: 429 LCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGM-AERGCVP 487
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
+ TY ++D +C+ ++ +A+ + ++M G+ D T ++I+GLL R +A ++
Sbjct: 488 DMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRIQ 547
Query: 307 EE 308
+E
Sbjct: 548 DE 549
>gi|225439358|ref|XP_002269283.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like [Vitis vinifera]
Length = 1048
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/418 (23%), Positives = 182/418 (43%), Gaps = 61/418 (14%)
Query: 26 LHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIG 85
+ +L C T + ++I + L LFF + K + ++H + T+N + I G
Sbjct: 650 IEEALEKCTVQFTSQLVVEILRSCSLHGHAALLFFSWVGK-RDGYSHTTETYNMGIKISG 708
Query: 86 KSRNIDLFWETLQEMGRR-RLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLE 144
S+N EM R+ V T+ I +M + + F M C+ +
Sbjct: 709 CSKNFRSMRNLFFEMRRKGHPVTPDTWTIMIMQYGRAGLTEIALRNFAEMKANDCKPNGS 768
Query: 145 MLNKVVKTLCQRK--LVVEAKYLILKL--SEWIKPNEIAYGWLIKGYCDVGDLIEASKIW 200
++ LC RK V EA L++ + ++ E+ +L K C+VG L++A +
Sbjct: 769 TYKYLIICLCGRKGRKVDEAIKTFLEMIRAGYVPDKELVESYL-KCLCEVGKLLDARRCT 827
Query: 201 NLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCK 260
+ GF + +Y + I +C+
Sbjct: 828 EALCKLGFTIPL-------------------------------------SYSLYIRALCR 850
Query: 261 RGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISL 316
G++ +A +++E+ + D S+++GLL RGRL+EA + V+ +++ P + +
Sbjct: 851 AGRLEEALALVDEVGPERVTLDQYIYGSLVHGLLRRGRLKEALEKVDSMKQIGIHPTVHV 910
Query: 317 YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL------------GKRG 364
Y LI + ++ R+A + F++M + GCEPT+ TY L++GH+ G
Sbjct: 911 YTSLIVHFFKEKQMRKALETFQKMKEEGCEPTIVTYSALIRGHMAMGNFVDARNVFGLLQ 970
Query: 365 RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEG 422
KGP P ++F+ L K GKS +A + + +++ G+ +P + + + N EG
Sbjct: 971 LKGPFPDFKTYSMFISCLCKVGKSEEALQLLSEMLDSGI-IPSTINFRTVMFGLNREG 1027
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 138/296 (46%), Gaps = 8/296 (2%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVN 129
H + T+N M+ I G+++ L + + EM + D KT+ I + + + + K +
Sbjct: 202 CHTTRTYNTMLYIAGEAKEFGLVEKLIGEMEEKGCKRDIKTWTILISHYGKAKLIGKALL 261
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQ-RKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYC 188
M GCE + ++++LC +K + ++ + + + + Y L+
Sbjct: 262 ILEKMWKSGCEPDVAAYMILIRSLCNAQKADIALEFYKEMVQKEMGLDMSLYELLLTCLA 321
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
GD+ + + M P DV M+++F + EA+++ + + K + L
Sbjct: 322 GSGDIAGVQLVADDMIRRSQIPERDVFSCMLKSFCIAGRIREALELIRDLNDKNLT-LEP 380
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
+ + ++ +C+ +I+ A +++ M KR + D II G L R + +A+ V++
Sbjct: 381 NDFETLVKGLCRADRITDAAEIVDIMKKRKV-VDAKVYGIIISGYLRRNDIPKAFDVLQT 439
Query: 309 IEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL 360
+ + P IS Y L++ L RL ++ +++ EM++RG EP ++ GH+
Sbjct: 440 MTESGYLPTISTYTELMQHLFRLNEYQKGCKLYDEMLERGVEPDSVAITAMVAGHV 495
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/247 (19%), Positives = 104/247 (42%), Gaps = 41/247 (16%)
Query: 99 EMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRK 157
+M RR + ++ F L + +++ + +ND +VK LC+
Sbjct: 335 DMIRRSQIPERDVFSCMLKSFCIAGRIREALELIRDLNDKNLTLEPNDFETLVKGLCRAD 394
Query: 158 LVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDK 217
+ +A ++ + + + YG +I GY D+ +A + MT+ G+ P+I +
Sbjct: 395 RITDAAEIVDIMKKRKVVDAKVYGIIISGYLRRNDIPKAFDVLQTMTESGYLPTISTYTE 454
Query: 218 MIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKR 277
+++ F++N+ + K++ +EM +R
Sbjct: 455 LMQHLFRLNEYQKGCKLY------------------------------------DEMLER 478
Query: 278 GIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISL----YHGLIKGLLRLRRAREA 333
G+E D++ +++++ G + + + EA+KV +++ I Y IK L ++ R E
Sbjct: 479 GVEPDSVAITAMVAGHVRQNHIFEAWKVFNSMQERGIRATWKSYSVFIKELCKISRTDEV 538
Query: 334 TQVFREM 340
+V EM
Sbjct: 539 IKVLNEM 545
>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 670
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 171/376 (45%), Gaps = 28/376 (7%)
Query: 65 KAQPCFAH---NSITFNRMVDIIGKSRNIDLFWETLQEMGRR-RLVNDKTFKIALMTLAE 120
K++P F TF R+++ SR + L M R R++ + F + +
Sbjct: 77 KSRPQFGSYKLGDATFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKACGK 136
Query: 121 VRELKKMVNFFHIM-NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL----SEWIKP 175
+ VNFFH M ND C+ +++ N V+ + Q A L + S+ +P
Sbjct: 137 AHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQP 196
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
N + Y +IK C +G + A + M + P + ++ K + DEA+ +
Sbjct: 197 NLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLL 256
Query: 236 QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
M+ + + T+ ++ID + K G +S+A +++ MF +G + +T +++I+GL
Sbjct: 257 DEMQAEGCLPNPV-TFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCL 315
Query: 296 RGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
+G+L +A ++E++ P+ Y +I GL++ RRA + + M +RG + +
Sbjct: 316 KGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYI 375
Query: 352 YIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERV 398
Y L+ G L K G+ KG P V F+ GL + K +A ++ +
Sbjct: 376 YSSLISG-LFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEM 434
Query: 399 MNRGVEVPRFDYNKFL 414
+++G F Y+ +
Sbjct: 435 LSKGFLPNAFTYSSLM 450
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 152/337 (45%), Gaps = 11/337 (3%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
N +T+N ++ + +D L++M + V N T+ + L + R + V+
Sbjct: 302 NEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHIL 361
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
M + G + + + + ++ L + A L +++E KPN + YG I G C
Sbjct: 362 MSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRD 421
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
EA I M +GF P+ +++ FFK +A+ V++ M + M +
Sbjct: 422 EKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRH-NVVC 480
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
++++ +C+ G++ +A T+ M G++ D + SS+I GL G + + K+ E++
Sbjct: 481 CSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQ 540
Query: 311 ------KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
+PD+ Y+ L L R A + M+ GC+P T + L+ L +R
Sbjct: 541 CQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLET-LRERI 599
Query: 365 RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNR 401
D + D + V L+K + L A + VE ++ R
Sbjct: 600 NPPQDGRLFLDELVV-RLLKRERKLSALRIVEEMLLR 635
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/324 (20%), Positives = 131/324 (40%), Gaps = 63/324 (19%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRR-RLVNDKTFKIALMTLAEVRELKKMVNFF 131
N +T+ +++ + K R + L M R + N+ + + L + + + V +
Sbjct: 337 NQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLW 396
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGY--- 187
M + GC+ ++ + + LC+ + EA+ ++ + LS+ PN Y L+KG+
Sbjct: 397 KEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKK 456
Query: 188 --------------------------------CDVGDLIEASKIWNLMTDEGFEPSIDVV 215
C+ G L EA +W M EG +P +
Sbjct: 457 GDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAY 516
Query: 216 DKMIETFFKINKDDEAMKVFQMMRVKRMDD-LGLSTYRIVIDWMCKRGKISQAYTMLEEM 274
MI+ + D+ +K+F M+ + + TY I+ + +C++ +++A +L M
Sbjct: 517 SSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSM 576
Query: 275 FKRGIEADNLT---------------------LSSIIYGLLARGRLREAYKVVEEI---- 309
G + D+LT L ++ LL R R A ++VEE+
Sbjct: 577 LDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDELVVRLLKRERKLSALRIVEEMLLRF 636
Query: 310 EKPDISLYHGLIKGLLRLRRAREA 333
P+ S + +I+ + +R RE
Sbjct: 637 LPPEPSTWSRVIQRTCKPKRIRET 660
>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 646
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 171/376 (45%), Gaps = 28/376 (7%)
Query: 65 KAQPCFAH---NSITFNRMVDIIGKSRNIDLFWETLQEMGRR-RLVNDKTFKIALMTLAE 120
K++P F TF R+++ SR + L M R R++ + F + +
Sbjct: 53 KSRPQFGSYKLGDATFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKACGK 112
Query: 121 VRELKKMVNFFHIM-NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL----SEWIKP 175
+ VNFFH M ND C+ +++ N V+ + Q A L + S+ +P
Sbjct: 113 AHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQP 172
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
N + Y +IK C +G + A + M + P + ++ K + DEA+ +
Sbjct: 173 NLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLL 232
Query: 236 QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
M+ + + T+ ++ID + K G +S+A +++ MF +G + +T +++I+GL
Sbjct: 233 DEMQAEGCLPNPV-TFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCL 291
Query: 296 RGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
+G+L +A ++E++ P+ Y +I GL++ RRA + + M +RG + +
Sbjct: 292 KGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYI 351
Query: 352 YIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERV 398
Y L+ G L K G+ KG P V F+ GL + K +A ++ +
Sbjct: 352 YSSLISG-LFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEM 410
Query: 399 MNRGVEVPRFDYNKFL 414
+++G F Y+ +
Sbjct: 411 LSKGFLPNAFTYSSLM 426
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 152/337 (45%), Gaps = 11/337 (3%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
N +T+N ++ + +D L++M + V N T+ + L + R + V+
Sbjct: 278 NEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHIL 337
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
M + G + + + + ++ L + A L +++E KPN + YG I G C
Sbjct: 338 MSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRD 397
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
EA I M +GF P+ +++ FFK +A+ V++ M + M +
Sbjct: 398 EKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRH-NVVC 456
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
++++ +C+ G++ +A T+ M G++ D + SS+I GL G + + K+ E++
Sbjct: 457 CSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQ 516
Query: 311 ------KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
+PD+ Y+ L L R A + M+ GC+P T + L+ L +R
Sbjct: 517 CQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLET-LRERI 575
Query: 365 RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNR 401
D + D + V L+K + L A + VE ++ R
Sbjct: 576 NPPQDGRLFLDELVV-RLLKRERKLSALRIVEEMLLR 611
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/324 (20%), Positives = 131/324 (40%), Gaps = 63/324 (19%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRR-RLVNDKTFKIALMTLAEVRELKKMVNFF 131
N +T+ +++ + K R + L M R + N+ + + L + + + V +
Sbjct: 313 NQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLW 372
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGY--- 187
M + GC+ ++ + + LC+ + EA+ ++ + LS+ PN Y L+KG+
Sbjct: 373 KEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKK 432
Query: 188 --------------------------------CDVGDLIEASKIWNLMTDEGFEPSIDVV 215
C+ G L EA +W M EG +P +
Sbjct: 433 GDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAY 492
Query: 216 DKMIETFFKINKDDEAMKVFQMMRVKRMDD-LGLSTYRIVIDWMCKRGKISQAYTMLEEM 274
MI+ + D+ +K+F M+ + + TY I+ + +C++ +++A +L M
Sbjct: 493 SSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSM 552
Query: 275 FKRGIEADNLT---------------------LSSIIYGLLARGRLREAYKVVEEI---- 309
G + D+LT L ++ LL R R A ++VEE+
Sbjct: 553 LDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDELVVRLLKRERKLSALRIVEEMLLRF 612
Query: 310 EKPDISLYHGLIKGLLRLRRAREA 333
P+ S + +I+ + +R RE
Sbjct: 613 LPPEPSTWSRVIQRTCKPKRIRET 636
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 140/300 (46%), Gaps = 16/300 (5%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+T+N +++ K E EM R ++ T+ + + L + F++
Sbjct: 292 VTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYL 351
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M GC + N ++ C+ K V + L+ +++E + N I Y LI G+C VGD
Sbjct: 352 MATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGD 411
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD-------- 244
L A + M G P++ + +++ K +A+++F+ M+ +MD
Sbjct: 412 LNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFN 471
Query: 245 --DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
+ + TY I+I + GK +A + EEM RGI D +T +S+I+GL + RL EA
Sbjct: 472 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEA 531
Query: 303 YKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
++ + + P++ + LI G + R + ++F EM +RG TYI L+ G
Sbjct: 532 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHG 591
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/415 (23%), Positives = 163/415 (39%), Gaps = 79/415 (19%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK- 168
TF L L + + ++ FH M C+ ++ ++ LC+ VVEA L+ +
Sbjct: 150 TFSTLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRM 205
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD-EGFEPSIDV-----VDKMIETF 222
L + ++PN+I YG ++ G C +GD + A + M + +P++ + MI F
Sbjct: 206 LEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGF 265
Query: 223 FKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEAD 282
+ EA ++ Q M ++ + TY +I+ K GK +A + +EM RGI
Sbjct: 266 CSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPS 325
Query: 283 NLTLSSIIYGLLARGRLREA----YKVVEEIEKPDISLYHGLIKGLLRLRRARE------ 332
+T SS+I G + RL A Y + + PDI ++ LI G R +R +
Sbjct: 326 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLH 385
Query: 333 -----------------------------ATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
A + +EM+ G P + T LL G L
Sbjct: 386 EMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDG-LCDN 444
Query: 364 GR------------------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVM 399
G+ G +P V I + GL+ GK L+A + E +
Sbjct: 445 GKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMP 504
Query: 400 NRGVEVPRFDYNKFLHYYSNE----EGVVMFEEVGKKLREVGLADLADIFQRYGK 450
+RG+ YN +H + E MF+ +G K + + Y K
Sbjct: 505 HRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCK 559
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 124/296 (41%), Gaps = 19/296 (6%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAE 120
Y + C + + ITFN ++ +++ +D + L EM LV N T+ + +
Sbjct: 350 YLMATKGC-SPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQ 408
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE--------- 171
V +L + M G ++ N ++ LC + +A + + +
Sbjct: 409 VGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASH 468
Query: 172 ---WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++P+ Y LI G + G +EA +++ M G P + +I K ++
Sbjct: 469 PFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRL 528
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
DEA ++F M K + T+ +I+ CK G++ + EM +RGI A+ +T +
Sbjct: 529 DEATQMFDSMGSKSFSP-NVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYIT 587
Query: 289 IIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREM 340
+I+G G + A + +E+ PD ++ GL + A + ++
Sbjct: 588 LIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDL 643
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 121/299 (40%), Gaps = 55/299 (18%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
+ N ++ L+K +C L A + +T GF P++ ++ ++ EA+
Sbjct: 109 VPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEAL 168
Query: 233 KVFQMM--------------------------RVKRMDDLGLS----TYRIVIDWMCKRG 262
+F M + RM + GL TY ++D MCK G
Sbjct: 169 DLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMG 228
Query: 263 KISQAYTMLEEMFKRGIEADNLTL------SSIIYGLLARGRLREAYKVVEEIEK----- 311
A +L +M + N+ + + +I G + GR EA ++++E+ +
Sbjct: 229 DTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKIS 288
Query: 312 PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR-------- 363
PD+ Y+ LI ++ + EA +++ EM+ RG P+ TY ++ G +
Sbjct: 289 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHM 348
Query: 364 ----GRKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
KG P ++ F+T+ + G +A + D K + + G+ Y +H +
Sbjct: 349 FYLMATKGCSPDIITFNTL-IAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGF 406
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 84/176 (47%), Gaps = 1/176 (0%)
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
L G+ ++ L +A ++ M PS+ K++ ++ + D + + + M ++R
Sbjct: 49 LRSGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRR 108
Query: 243 MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
+ ++ I++ C K+ A + ++ K G +T S++++GL R+ EA
Sbjct: 109 VP-CNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEA 167
Query: 303 YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+ ++ KP++ + L+ GL R R EA + M++ G +P TY ++ G
Sbjct: 168 LDLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDG 223
>gi|357500061|ref|XP_003620319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495334|gb|AES76537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 496
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 127/249 (51%), Gaps = 11/249 (4%)
Query: 116 MTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKV--VKTLCQRKLVVEAKYLILKL-SEW 172
M AEV L+ VN + +C + + L + V T C+ V EAK + + +
Sbjct: 193 MLFAEVTSLRGDVNN---LRECFVSFMFQYLGMMAPVSTFCKEGKVKEAKNVFAAMMKKG 249
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
KPN + Y L+ GYC V ++ +A I+N M G P I + +I F KI D AM
Sbjct: 250 FKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNPDIQSYNILINGFCKIKMTDAAM 309
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
+F+ M +++ + TY +ID +CK GKIS A +++EM RG D +T SS++
Sbjct: 310 NLFEEMHCRKIIP-NVVTYNSLIDGLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLDA 368
Query: 293 LLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
L +A ++ +++ +P++ Y LI GL + R +A +F +++ +G
Sbjct: 369 LCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGLCKGGRPEDAQNIFEDLLVKGYNIN 428
Query: 349 MHTYIMLLQ 357
++TY +++
Sbjct: 429 VNTYTVMIH 437
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 107/229 (46%), Gaps = 6/229 (2%)
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIA 179
V+E+ K + F+ M G ++ N ++ C+ K+ A L ++ I PN +
Sbjct: 267 VKEVNKAKSIFNNMAQGGVNPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVT 326
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
Y LI G C G + A K+ + M D G P I +++ K + D+A+ + ++
Sbjct: 327 YNSLIDGLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLK 386
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
+ + + TY I+I+ +CK G+ A + E++ +G + T + +I+ G
Sbjct: 387 DQGLQP-NMYTYTILINGLCKGGRPEDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNGMF 445
Query: 300 REAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
EA ++ ++E+ P+ Y +I+ L +A ++ EMI RG
Sbjct: 446 GEALAMLSKMEENGCIPNAVTYEIIIRSLFDKDENDKAEKLLLEMITRG 494
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 81/217 (37%), Gaps = 53/217 (24%)
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK--- 311
+ CK GK+ +A + M K+G + + +T SS++ G + +A + + +
Sbjct: 226 VSTFCKEGKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGV 285
Query: 312 -PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG------ 364
PDI Y+ LI G +++ A +F EM R P + TY L+ G L K G
Sbjct: 286 NPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDG-LCKSGKISYAL 344
Query: 365 --------RKGPDPLVNFD----------------------------------TIFVGGL 382
R P ++ + TI + GL
Sbjct: 345 KLVDEMHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGL 404
Query: 383 VKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN 419
K G+ DA E ++ +G + Y +H + N
Sbjct: 405 CKGGRPEDAQNIFEDLLVKGYNINVNTYTVMIHVFCN 441
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 94/210 (44%), Gaps = 11/210 (5%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHIM 134
++N +++ K + D +EM R+++ N T+ + L + ++ + M
Sbjct: 291 SYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEM 350
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDL 193
+D G + + ++ LC+ +A L+ KL + ++PN Y LI G C G
Sbjct: 351 HDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGLCKGGRP 410
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL----S 249
+A I+ + +G+ +++ MI F EA+ + + +M++ G
Sbjct: 411 EDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAM-----LSKMEENGCIPNAV 465
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGI 279
TY I+I + + + +A +L EM RG+
Sbjct: 466 TYEIIIRSLFDKDENDKAEKLLLEMITRGL 495
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 164/362 (45%), Gaps = 20/362 (5%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHI 133
+ F +++ ++ + DL Q+M R+++ D +F I + +L ++ F
Sbjct: 80 VDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGK 139
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWI-KPNEIAYGWLIKGYCDVGD 192
+ G + N ++ LC V EA L ++ E +PN + + L+ G C G
Sbjct: 140 ITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGR 199
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
++EA + + M ++G +P+ +++ KI A+ + + M + Y
Sbjct: 200 IVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYS 259
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK- 311
+ID +CK G+ S A + EM ++GI D T +S+I G + GR +A ++++E+ +
Sbjct: 260 AIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER 319
Query: 312 ---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR----- 363
PD+ Y+ LI ++ + EA +++ EM+ RG P TY ++ G +
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAA 379
Query: 364 -------GRKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
KG P L+ F+T+ + G A + D + + + G+ YN +H
Sbjct: 380 EHMFYLMATKGCSPNLITFNTL-IDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIH 438
Query: 416 YY 417
+
Sbjct: 439 GF 440
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 137/300 (45%), Gaps = 16/300 (5%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHI 133
+T+N +++ K E EM R ++ N T+ + + L + F++
Sbjct: 326 VTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYL 385
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M GC +L N ++ C K + + L+ +++E + + Y LI G+ VGD
Sbjct: 386 MATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGD 445
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD-------- 244
L A + M G P I D +++ K +A+++F++M+ + D
Sbjct: 446 LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFN 505
Query: 245 --DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
+ + TY I+I + GK +A + EEM RGI D +T SS+I GL + RL EA
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 303 YKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
++ + + P++ + LI G + R + ++F EM +RG TYI L+ G
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICG 625
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 140/332 (42%), Gaps = 24/332 (7%)
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGY 187
N F M + G L N ++ C +A+ L+ ++ E I P+ + Y LI +
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAF 335
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
G EA ++++ M G P+ MI+ F K N+ D A +F +M K
Sbjct: 336 VKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP-N 394
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
L T+ +ID C +I +L EM + G+ AD T +++I+G G L A +++
Sbjct: 395 LITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQ 454
Query: 308 EIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE-PTMHTYIMLLQGHLGK 362
E+ PDI L+ GL + ++A ++F+ M K + H +
Sbjct: 455 EMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPF---------- 504
Query: 363 RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE-- 420
G +P V I + GL+ GK L+A + E + +RG+ Y+ + +
Sbjct: 505 ---NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561
Query: 421 --EGVVMFEEVGKKLREVGLADLADIFQRYGK 450
E MF+ +G K + + Y K
Sbjct: 562 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCK 593
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 108/235 (45%), Gaps = 18/235 (7%)
Query: 147 NKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
+ ++ C++ + A+++ L ++ PN I + LI GYC + + ++ + MT+
Sbjct: 364 SSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTE 423
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKIS 265
G + +I F+ + + A+ + Q M + + T ++D +C GK+
Sbjct: 424 TGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCP-DIVTCDTLLDGLCDNGKLK 482
Query: 266 QAYTMLEEMFK-----------RGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK--- 311
A M + M K G+E D T + +I GL+ G+ EA ++ EE+
Sbjct: 483 DALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542
Query: 312 -PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
PD Y +I GL + R EATQ+F M + P + T+ L+ G+ K GR
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYC-KAGR 596
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 125/296 (42%), Gaps = 19/296 (6%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKT-FKIALMTLAE 120
Y + C + N ITFN ++D ++ ID E L EM LV D T + +
Sbjct: 384 YLMATKGC-SPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYL 442
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA--KYLILKLSE------- 171
V +L ++ M G + + ++ LC + +A + +++ S+
Sbjct: 443 VGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASH 502
Query: 172 ---WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++P+ Y LI G + G +EA +++ M G P MI+ K ++
Sbjct: 503 PFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 562
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
DEA ++F M K + T+ +I+ CK G++ + EM +RGI A+ +T +
Sbjct: 563 DEATQMFDSMGSKSFSP-NVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYIT 621
Query: 289 IIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREM 340
+I G G + A + +E+ PD ++ GL + A + ++
Sbjct: 622 LICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
>gi|356526063|ref|XP_003531639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like isoform 1 [Glycine max]
gi|356526065|ref|XP_003531640.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like isoform 2 [Glycine max]
Length = 522
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 159/342 (46%), Gaps = 16/342 (4%)
Query: 26 LHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIG 85
LH+ F T +F Q ++ P L F Y + C + + + F+ + +
Sbjct: 110 LHTLSKHRQFKTTQKFLTQTLSSHPPHTLFDALLFSY----RLCNSSSPLVFDSLFKTLA 165
Query: 86 ---KSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGC-EY 141
K R+ + ++E G V ++ L +L +R + F+ + C
Sbjct: 166 HTNKFRHATHIYTLMKEHGFSPTV--QSCNAFLSSLLRLRRADIALAFYREIRRRSCVSP 223
Query: 142 SLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIW 200
++ LN +++ C V + ++ K+ + + PN +++ LI GYC+ G A K+
Sbjct: 224 NVYTLNMIIRAYCMLGEVQKGFDMLEKMMDMGLSPNVVSFNTLISGYCNKGLFGLALKVK 283
Query: 201 NLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCK 260
+LM + G +P++ + +I F K K EA +VF M+V +D + TY +++ +
Sbjct: 284 SLMVENGVQPNVVTFNTLINGFCKERKLHEANRVFNEMKVANVDP-SVVTYNTLLNGYGQ 342
Query: 261 RGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISL 316
G + EEM + G++AD LT +++I GL G+ ++A V E++K P+ S
Sbjct: 343 VGDSEMGVRVYEEMMRNGLKADILTYNALILGLCKDGKTKKAAGFVRELDKENLVPNAST 402
Query: 317 YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+ LI G + A ++R M++ GC P T+ ML+
Sbjct: 403 FSALITGQCVRNNSERAFLIYRSMVRSGCSPNGQTFQMLISA 444
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 111/240 (46%), Gaps = 18/240 (7%)
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
+ + + L K A+ I+ LM + GF P++ + + + ++ + D A+ +
Sbjct: 153 SPLVFDSLFKTLAHTNKFRHATHIYTLMKEHGFSPTVQSCNAFLSSLLRLRRADIALAFY 212
Query: 236 QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
+ +R + + T ++I C G++ + + MLE+M G+ + ++ +++I G
Sbjct: 213 REIRRRSCVSPNVYTLNMIIRAYCMLGEVQKGFDMLEKMMDMGLSPNVVSFNTLISGYCN 272
Query: 296 RGRLREAYKV----VEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
+G A KV VE +P++ ++ LI G + R+ EA +VF EM +P++ T
Sbjct: 273 KGLFGLALKVKSLMVENGVQPNVVTFNTLINGFCKERKLHEANRVFNEMKVANVDPSVVT 332
Query: 352 YIMLLQGHLGKRG-------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERV 398
Y LL G+ G+ G R G + + GL K GK+ AA +V +
Sbjct: 333 YNTLLNGY-GQVGDSEMGVRVYEEMMRNGLKADILTYNALILGLCKDGKTKKAAGFVREL 391
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 87/212 (41%), Gaps = 3/212 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
N +TFN +++ K R + EM + + T+ L +V + + V +
Sbjct: 294 NVVTFNTLINGFCKERKLHEANRVFNEMKVANVDPSVVTYNTLLNGYGQVGDSEMGVRVY 353
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDV 190
M G + + N ++ LC+ +A + +L E + PN + LI G C
Sbjct: 354 EEMMRNGLKADILTYNALILGLCKDGKTKKAAGFVRELDKENLVPNASTFSALITGQCVR 413
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
+ A I+ M G P+ +I F K D A++V + M + R+ LST
Sbjct: 414 NNSERAFLIYRSMVRSGCSPNGQTFQMLISAFCKNEDFDGAVQVLRDM-LGRLMSPDLST 472
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEAD 282
+ D +C+ GK A + EM R + D
Sbjct: 473 MSELCDGLCRCGKNQLALALCSEMEVRRLLPD 504
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 58/138 (42%), Gaps = 1/138 (0%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
+K + + Y LI G C G +A+ + E P+ +I N + A
Sbjct: 361 LKADILTYNALILGLCKDGKTKKAAGFVRELDKENLVPNASTFSALITGQCVRNNSERAF 420
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
+++ M V+ T++++I CK A +L +M R + D T+S + G
Sbjct: 421 LIYRSM-VRSGCSPNGQTFQMLISAFCKNEDFDGAVQVLRDMLGRLMSPDLSTMSELCDG 479
Query: 293 LLARGRLREAYKVVEEIE 310
L G+ + A + E+E
Sbjct: 480 LCRCGKNQLALALCSEME 497
>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Glycine max]
Length = 545
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 168/350 (48%), Gaps = 28/350 (8%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
N + +N ++D + K + + EM + + N T+ + V +L + + F
Sbjct: 202 NVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFL 261
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAK-YLILKLSEWIKPNEIAYGWLIKGYCDV 190
+ M + + N +V L + V EAK L + + +KPN I Y LI GY
Sbjct: 262 NEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGY--- 318
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
A ++N + G P + + MI KI + +EA+ +++ M K M T
Sbjct: 319 -----AKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVP-NTVT 372
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y +ID +CK G+IS A+ +++EM RG A+ +T +S+I GL G+L +A ++ +++
Sbjct: 373 YNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMK 432
Query: 311 ----KPDISLYHGLIKGLL-RLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL----- 360
+PD+ + L+ GLL + +R + A +F++++ +G P ++TY +++ GH
Sbjct: 433 DQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLL 492
Query: 361 -------GKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
K G P I + L++ G++ A K + ++ RG+
Sbjct: 493 DEAYALQSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEMIARGL 542
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 141/305 (46%), Gaps = 47/305 (15%)
Query: 140 EYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLIEASK 198
E ++ M N ++ LC+RKLV EA L ++S + I N + Y +I G+C VG L EA
Sbjct: 200 EPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALG 259
Query: 199 IWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR---------------- 242
N M + P + + + +++ K K EA V ++ VK
Sbjct: 260 FLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVI-VKTCLKPNVITYNTLIDGY 318
Query: 243 ----MDDLGLS-------TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
+ +GL +Y I+I+ +CK ++ +A + +EM ++ + + +T +S+I
Sbjct: 319 AKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLID 378
Query: 292 GLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
GL GR+ A+ +++E+ ++ Y+ LI GL + + +A + +M +G +P
Sbjct: 379 GLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQP 438
Query: 348 TMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKY 394
M+T +LL G L K R KG P V I + G K G LD A
Sbjct: 439 DMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEG-LLDEAYA 497
Query: 395 VERVM 399
++ M
Sbjct: 498 LQSKM 502
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 127/278 (45%), Gaps = 10/278 (3%)
Query: 146 LNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
LN ++ C + A ++ K+ +W +P+ + LIKG C G + +A + +
Sbjct: 101 LNILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLL 160
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
+GF +I KI + A+++ + + R+ + + Y +ID +CKR +
Sbjct: 161 AQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRID-GRLTEPNVVMYNTIIDCLCKRKLV 219
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGL 320
S+A + EM +GI A+ +T S+II+G G+L EA + E+ PD+ +Y+ L
Sbjct: 220 SEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTL 279
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH----LGKRGRKGPDPLVNFDT 376
+ L + + +EA V ++K +P + TY L+ G+ G G P V
Sbjct: 280 VDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSYN 339
Query: 377 IFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
I + L K + +A + + + + YN +
Sbjct: 340 IMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLI 377
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/399 (22%), Positives = 167/399 (41%), Gaps = 58/399 (14%)
Query: 69 CFAHNS--ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-----TFKIALMTLAEV 121
C H I FN+++D K ++ + T+ + RR + T I + +
Sbjct: 56 CMRHTPPIIQFNKILDSFAKMKH----YPTVVSLSRRLELKAIQPDFFTLNILINCFCHL 111
Query: 122 RELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAY 180
++ + + G + L ++K LC + V +A + KL ++ + ++++Y
Sbjct: 112 GQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSY 171
Query: 181 GWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
G LI G C +G+ A ++ + EP++ + + +I+ K EA +F M V
Sbjct: 172 GTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSV 231
Query: 241 KRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
K + + TY +I C GK+++A L EM + I D ++++ L G+++
Sbjct: 232 KGISA-NVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVK 290
Query: 301 EAYKV----VEEIEKPDISLYHGLIKG---------------------------LLRLRR 329
EA V V+ KP++ Y+ LI G L +++R
Sbjct: 291 EAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSYNIMINRLCKIKR 350
Query: 330 AREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDT 376
EA +++EM ++ P TY L+ G L K GR +G V
Sbjct: 351 VEEALNLYKEMHQKNMVPNTVTYNSLIDG-LCKSGRISYAWDLIDEMHDRGHHANVITYN 409
Query: 377 IFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
+ GL K G+ A + ++ ++G++ + N LH
Sbjct: 410 SLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLH 448
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 81/180 (45%), Gaps = 3/180 (1%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALMTLAE 120
Y + Q N++T+N ++D + KS I W+ + EM R N T+ + L +
Sbjct: 358 YKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCK 417
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVK-TLCQRKLVVEAKYLILK-LSEWIKPNEI 178
+L K + + M D G + + LN ++ LC+ K + A+ L L + PN
Sbjct: 418 NGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVY 477
Query: 179 AYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
Y +I G+C G L EA + + M D G P+ +I + + D+A K+ M
Sbjct: 478 TYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEM 537
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 133/260 (51%), Gaps = 11/260 (4%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
TF L L + + ++FFH + C+ ++ ++ LC+ VVEA L+ ++
Sbjct: 148 TFSTLLHGLCVEDRVSEALHFFHQI----CKPNVIAFTTLMNGLCREGRVVEAVALLDRM 203
Query: 170 SE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEG-FEPSIDVVDKMIETFFKINK 227
E ++PN+I YG ++ G C +GD + A + M + +P++ + +I+ +K +
Sbjct: 204 VEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGR 263
Query: 228 DDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLS 287
+A +F M+ K + L TY +I+ C G+ S+A +L EMF+R + D +T S
Sbjct: 264 QTDAQNLFSEMQEKGISP-NLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFS 322
Query: 288 SIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
+I L+ G+ EA ++ E+ P+ Y+ +I G + R A ++F M +
Sbjct: 323 VLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATK 382
Query: 344 GCEPTMHTYIMLLQGHLGKR 363
GC P + T+ +L+ G+ G +
Sbjct: 383 GCSPDVITFSILIDGYCGAK 402
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 141/300 (47%), Gaps = 16/300 (5%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHI 133
+TF+ +++ + K E EM R ++ N T+ + ++ L F++
Sbjct: 319 VTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYL 378
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M GC + + ++ C K V + L+ ++S + N I Y LI G+C +G+
Sbjct: 379 MATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGN 438
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD-------- 244
L A + M G P++ + +++ K +A+++F++M+ +MD
Sbjct: 439 LNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFN 498
Query: 245 --DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
+ + TY I+I + GK S+A + EEM RG+ D +T +S+I GL + RL EA
Sbjct: 499 DVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEA 558
Query: 303 YKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
++ + + PD+ + LI G ++ R + +VF EM +RG TY L+ G
Sbjct: 559 TQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHG 618
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 140/314 (44%), Gaps = 24/314 (7%)
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGY 187
N F M + G +L N ++ C EA+ L+ ++ E + P+ + + LI
Sbjct: 269 NLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINAL 328
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
G EA +++N M G P+ + MI+ F K N+ D A ++F +M K
Sbjct: 329 VKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSP-D 387
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
+ T+ I+ID C ++ +L EM +RG+ A+ +T +++I+G G L A +++
Sbjct: 388 VITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQ 447
Query: 308 EIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE-PTMHTYIMLLQGHLGK 362
E+ P++ + L+ GL + ++A ++F+ M K + H +
Sbjct: 448 EMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPF---------- 497
Query: 363 RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE-- 420
+P V I + GL+ GK +A + E + +RG+ YN + +
Sbjct: 498 ---NDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSR 554
Query: 421 --EGVVMFEEVGKK 432
E MF+ +G K
Sbjct: 555 LDEATQMFDSMGSK 568
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 123/266 (46%), Gaps = 24/266 (9%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
I N ++ LIK +C L A + +T GF PS+ ++ ++ EA+
Sbjct: 107 IPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEAL 166
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
F ++ + + + +T +++ +C+ G++ +A +L+ M + G++ + +T +I+ G
Sbjct: 167 HFFH--QICKPNVIAFTT---LMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDG 221
Query: 293 LLARGRLREAYKVVEEIE-----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
+ G A ++ ++E KP++ +Y +I GL + R +A +F EM ++G P
Sbjct: 222 MCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISP 281
Query: 348 TMHTYIMLLQGHLGKR-------------GRKGPDPLVNFDTIFVGGLVKAGKSLDAAKY 394
+ TY ++ G RK +V F ++ + LVK GK +A +
Sbjct: 282 NLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTF-SVLINALVKEGKFFEAEEL 340
Query: 395 VERVMNRGVEVPRFDYNKFLHYYSNE 420
++ RG+ YN + +S +
Sbjct: 341 YNEMLPRGIIPNTITYNSMIDGFSKQ 366
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 139/323 (43%), Gaps = 19/323 (5%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAE 120
+++ + + N T+N M++ S L+EM R++ D TF + + L +
Sbjct: 271 FSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVK 330
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLC-QRKLVVEAKYLILKLSEWIKPNEIA 179
+ + ++ M G + N ++ Q +L + L ++ P+ I
Sbjct: 331 EGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVIT 390
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
+ LI GYC + + K+ + M+ G + +I F ++ + A+ + Q M
Sbjct: 391 FSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEM- 449
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFK-----------RGIEADNLTLSS 288
+ + T ++D +C GK+ A M + M K +E D T +
Sbjct: 450 ISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNI 509
Query: 289 IIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+I GL+ G+ EA ++ EE+ PD Y+ +I GL + R EATQ+F M +G
Sbjct: 510 LICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKG 569
Query: 345 CEPTMHTYIMLLQGHLGKRGRKG 367
P + T+ L+ G+ K GR G
Sbjct: 570 FSPDVVTFTTLINGYC-KVGRVG 591
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 127/293 (43%), Gaps = 19/293 (6%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAE 120
Y + C + + ITF+ ++D ++ +D + L EM RR LV N T+ + +
Sbjct: 377 YLMATKGC-SPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQ 435
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA--KYLILKLSEW------ 172
+ L ++ M G ++ N ++ LC + +A + +++ S+
Sbjct: 436 LGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASH 495
Query: 173 ----IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++P+ Y LI G + G EA +++ M G P + +I+ K ++
Sbjct: 496 PFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRL 555
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
DEA ++F M K + T+ +I+ CK G++ + EM +RGI A+ +T +
Sbjct: 556 DEATQMFDSMGSKGFSP-DVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRT 614
Query: 289 IIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVF 337
+I+G G + A + +E+ PD ++ GL + A Q
Sbjct: 615 LIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVQCL 667
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 111/252 (44%), Gaps = 16/252 (6%)
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
L G+ ++ L +A ++ M P + K++ ++ + D + + + M ++R
Sbjct: 47 LQSGFHEIKGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRR 106
Query: 243 MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
+ + ++ I+I C K+ A + ++ K G +T S++++GL R+ EA
Sbjct: 107 IP-CNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEA 165
Query: 303 YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
+I KP++ + L+ GL R R EA + M++ G +P TY ++ G + K
Sbjct: 166 LHFFHQICKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDG-MCK 224
Query: 363 RG---------RKGPD-----PLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRF 408
G RK + P V + + GL K G+ DA + +G+ F
Sbjct: 225 MGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLF 284
Query: 409 DYNKFLHYYSNE 420
YN ++ + +
Sbjct: 285 TYNCMINGFCSS 296
>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Glycine max]
Length = 903
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 149/305 (48%), Gaps = 11/305 (3%)
Query: 70 FAHNSITFNRMVDIIGKSRNID---LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKK 126
F N +N +++ + K ++D L + + M R N T+ I + + L
Sbjct: 361 FVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRP--NGITYSILIDSFCRSGRLDV 418
Query: 127 MVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIK 185
+++F M G ++ N ++ C+ + A+ L ++++ + ++P + LI
Sbjct: 419 AISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLIS 478
Query: 186 GYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD 245
GYC + +A K++N M D G P++ +I NK EA ++F + +++
Sbjct: 479 GYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKP 538
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
+ TY ++I+ C+ GKI +A+ +LE+M ++G+ D T +I GL + GR+ +A
Sbjct: 539 TEV-TYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDF 597
Query: 306 VEEIEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG 361
++++ K ++ L Y L+ G + R EA EMI+RG + + +L+ G L
Sbjct: 598 IDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALK 657
Query: 362 KRGRK 366
+ RK
Sbjct: 658 QPDRK 662
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 90/192 (46%), Gaps = 6/192 (3%)
Query: 171 EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDE 230
+ ++P+ + Y +I Y G +A + W+LM E P++ ++ K + D
Sbjct: 674 QGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDR 733
Query: 231 AMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
A +F+ M+ + + TY +D + K G + +A + M K G+ A+ +T + II
Sbjct: 734 AGLLFKRMQAANVPPNSI-TYGCFLDNLTKEGNMKEAIGLHHAMLK-GLLANTVTHNIII 791
Query: 291 YGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
G GR EA KV+ E+ + PD Y LI R + +++ M+ RG E
Sbjct: 792 RGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLE 851
Query: 347 PTMHTYIMLLQG 358
P + Y +L+ G
Sbjct: 852 PDLVAYNLLIYG 863
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/370 (21%), Positives = 162/370 (43%), Gaps = 46/370 (12%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+T+N +++ + ID +E L++M ++ LV D T++ + L + K +F
Sbjct: 541 VTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDD 600
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
++ + + + ++ CQ ++EA ++ + I + + + LI G D
Sbjct: 601 LHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPD 660
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ M D+G P + MI+T+ K +A + + +M + + TY
Sbjct: 661 RKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFP-NVVTYT 719
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP 312
+++ +CK G++ +A + + M + +++T + L G ++EA
Sbjct: 720 ALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEA---------- 769
Query: 313 DISLYHGLIKGLL--------------RLRRAREATQVFREMIKRGCEPTMHTYIMLL-- 356
I L+H ++KGLL +L R EAT+V EM + G P TY L+
Sbjct: 770 -IGLHHAMLKGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYE 828
Query: 357 ---QGHLGKRGR-------KGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEV 405
G++G + +G +P LV ++ + G V G+ A + + ++ RG+ +
Sbjct: 829 YCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVN-GELDKAFELRDDMLRRGI-I 886
Query: 406 PRFDYNKFLH 415
P NK+L
Sbjct: 887 PD---NKYLQ 893
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/364 (17%), Positives = 147/364 (40%), Gaps = 41/364 (11%)
Query: 72 HNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFF 131
H++ ++ MV + SR LFW +L+ +RE F
Sbjct: 101 HSTTSYAIMVHALVHSR---LFWPA----------------NSLLHTLLLRESHPKCVFS 141
Query: 132 HIMNDCG-CEYSLEM-LNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYC 188
H ++ C++S + N +V+ + +A ++ L + + P L+ G
Sbjct: 142 HFLDSYKRCKFSSTLGFNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLL 201
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
V I ++++ + G P ++ + ++ A + + M D L +
Sbjct: 202 KVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFD-LSI 260
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY ++I +CK ++S+A + + +G+ AD +T +++ G + ++++E
Sbjct: 261 VTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDE 320
Query: 309 IEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
+ + P + GL+ GL + + +A ++ ++ + G P + Y L+ L K G
Sbjct: 321 MVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINS-LCKGG 379
Query: 365 RKGPDPLVNFD-------------TIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
L+ + +I + ++G+ A Y +R++ G+ + YN
Sbjct: 380 DLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYN 439
Query: 412 KFLH 415
++
Sbjct: 440 SLIN 443
>gi|313851107|ref|NP_001186539.1| pentatricopeptide repeat protein [Zea mays]
gi|312064725|gb|ADQ27447.1| pentatricopeptide repeat protein [Zea mays]
gi|414872960|tpg|DAA51517.1| TPA: hypothetical protein ZEAMMB73_325693 [Zea mays]
Length = 489
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 190/422 (45%), Gaps = 23/422 (5%)
Query: 10 RVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYT--QKAQ 67
R+C ++ + + S L L +T E + + + Y FF++ QK
Sbjct: 43 RLCKLIISCRKA--SALEHELDHSGVRVTPEIAESVLKHLDNAGMLAYRFFEWARKQKRG 100
Query: 68 PCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKM 127
C AH +++ +V + K R L W+ + M + + N +TF I + A ++L +
Sbjct: 101 VC-AHTVRSYHTVVTSLAKIRQYQLMWDVVAIMRKEGVANVETFGIIMRKYARAQKLDEA 159
Query: 128 VNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGY 187
V F++M G ++L N ++ LC+ K V +A+ + K++ P+ Y L++G+
Sbjct: 160 VYTFNVMEKYGVAHNLAAFNSLLSALCKSKNVRKAQEIFDKMNNRFSPDAKTYSILLEGW 219
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
L + ++++ M G +P I M++ K + +EA+ V Q M +
Sbjct: 220 GRAPSLPKMREVYSDMLAAGCQPDIVTYGIMVDALCKTGRVEEAVCVVQDMSSRGCQPTT 279
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
Y I++ +I A +M K GI D + +++I + A++V++
Sbjct: 280 F-IYSILVHTYGVDMRIEDAVAAFLDMEKDGIMPDVVVYNALITAFCKVKKFENAFRVMD 338
Query: 308 EIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG----- 358
+++ P+ ++ ++ L+ L + EA +VFR MIKR C+P TY M+++
Sbjct: 339 DMQGHGISPNSRTWNIILNTLISLGKDDEAYRVFRSMIKR-CKPDSDTYTMMIKMFCEND 397
Query: 359 ------HLGKRGR-KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
+ K R K P ++ ++ + GL G+ A +E ++ +G+ P +
Sbjct: 398 KIEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFG 457
Query: 412 KF 413
K
Sbjct: 458 KL 459
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 112/297 (37%), Gaps = 69/297 (23%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNF 130
AHN FN ++ + KS+N+ E +M R + KT+ I L L KM
Sbjct: 172 AHNLAAFNSLLSALCKSKNVRKAQEIFDKMNNRFSPDAKTYSILLEGWGRAPSLPKMREV 231
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-------------------- 170
+ M GC+ + +V LC+ V EA ++ +S
Sbjct: 232 YSDMLAAGCQPDIVTYGIMVDALCKTGRVEEAVCVVQDMSSRGCQPTTFIYSILVHTYGV 291
Query: 171 ----------------EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDV 214
+ I P+ + Y LI +C V A ++ + M G P+
Sbjct: 292 DMRIEDAVAAFLDMEKDGIMPDVVVYNALITAFCKVKKFENAFRVMDDMQGHGISPNSRT 351
Query: 215 VDKMIETFFKINKDDEAMKVFQMM--RVKRMDDL-------------------------- 246
+ ++ T + KDDEA +VF+ M R K D
Sbjct: 352 WNIILNTLISLGKDDEAYRVFRSMIKRCKPDSDTYTMMIKMFCENDKIEMALKVWKYMRL 411
Query: 247 -----GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR 298
+ T+ ++I+ +C +G++SQA +LE+M ++GI T + LL GR
Sbjct: 412 KQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKEGR 468
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 80/191 (41%), Gaps = 30/191 (15%)
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
+ T+ I++ + K+ +A M K G+ + +S++ L +R+A ++ +
Sbjct: 140 VETFGIIMRKYARAQKLDEAVYTFNVMEKYGVAHNLAAFNSLLSALCKSKNVRKAQEIFD 199
Query: 308 EIE---KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
++ PD Y L++G R + +V+ +M+ GC+P + TY
Sbjct: 200 KMNNRFSPDAKTYSILLEGWGRAPSLPKMREVYSDMLAAGCQPDIVTY------------ 247
Query: 365 RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN----E 420
I V L K G+ +A V+ + +RG + F Y+ +H Y E
Sbjct: 248 -----------GIMVDALCKTGRVEEAVCVVQDMSSRGCQPTTFIYSILVHTYGVDMRIE 296
Query: 421 EGVVMFEEVGK 431
+ V F ++ K
Sbjct: 297 DAVAAFLDMEK 307
>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 139/292 (47%), Gaps = 11/292 (3%)
Query: 75 ITFNRMVDIIGKSRNID---LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFF 131
+T+N +V+ + K +D F ++ G + N T I L ++
Sbjct: 52 VTYNVLVNGMCKEGRLDEAIKFLNSMPSYGSQP--NVITHNIILRSMCSTGRWMDAEKLL 109
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
M GC S+ N ++ LC++ L+ A ++ K+ + PN ++Y L+ G+C
Sbjct: 110 TEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKE 169
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
+ A + +M G P I + M+ K K D A+++ + K + L T
Sbjct: 170 KKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPV-LIT 228
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y VID + K GK QA +L EM +G++ D +T SS+I GL G++ EA K ++E
Sbjct: 229 YNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVE 288
Query: 311 ----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
KP+ Y+ ++ GL + ++ A MI +GC+PT +Y +L++G
Sbjct: 289 GFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEG 340
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 136/284 (47%), Gaps = 20/284 (7%)
Query: 149 VVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEG 207
+++ C V +A L+ ++ S KP+ + Y L+ G C G L EA K N M G
Sbjct: 22 LIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFLNSMPSYG 81
Query: 208 FEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQA 267
+P++ + ++ + + +A K+ M V++ + T+ I+I+++C++G + +A
Sbjct: 82 SQPNVITHNIILRSMCSTGRWMDAEKLLTEM-VRKGCSPSVVTFNILINFLCRKGLLGRA 140
Query: 268 YTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKG 323
+LE+M G ++L+ + +++G ++ A + +E + PDI Y+ ++
Sbjct: 141 IDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTA 200
Query: 324 LLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR-------------KGPDP 370
L + + A ++ ++ +GC P + TY ++ G L K G+ KG P
Sbjct: 201 LCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDG-LSKVGKTDQAVELLHEMRGKGLKP 259
Query: 371 LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
V + + GL + GK +A K+ V GV+ F YN +
Sbjct: 260 DVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIM 303
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 88/181 (48%), Gaps = 16/181 (8%)
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
TY I+I+ C + QA +L+EM RG + D +T + ++ G+ GRL EA K + +
Sbjct: 18 TYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFLNSM 77
Query: 310 ----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL-----QGHL 360
+P++ ++ +++ + R +A ++ EM+++GC P++ T+ +L+ +G L
Sbjct: 78 PSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLL 137
Query: 361 G-------KRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
G K G P + G K K A +Y+E +++RG YN
Sbjct: 138 GRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTM 197
Query: 414 L 414
L
Sbjct: 198 L 198
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 109/241 (45%), Gaps = 11/241 (4%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHI 133
+TFN +++ + + + + L++M N ++ L + +++ + + + I
Sbjct: 122 VTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEI 181
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGD 192
M GC + N ++ LC+ V A L+ +LS + P I Y +I G VG
Sbjct: 182 MVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGK 241
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS--- 249
+A ++ + M +G +P + +I + K +EA+K F ++ G+
Sbjct: 242 TDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFH-----DVEGFGVKPNA 296
Query: 250 -TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY ++ +CK + +A L M +G + ++ + +I G+ G +EA +++ E
Sbjct: 297 FTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNE 356
Query: 309 I 309
+
Sbjct: 357 L 357
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 66/135 (48%), Gaps = 2/135 (1%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
IT+N ++D + K D E L EM + L D T+ + L+ ++++ + FFH
Sbjct: 227 ITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHD 286
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDVGD 192
+ G + + N ++ LC+ + A +L +S+ KP E++Y LI+G + G
Sbjct: 287 VEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGL 346
Query: 193 LIEASKIWNLMTDEG 207
EA ++ N + G
Sbjct: 347 AKEALELLNELCSRG 361
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 51/118 (43%), Gaps = 14/118 (11%)
Query: 312 PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR------ 365
PD+ Y LI+ +A ++ EM RGC+P + TY +L+ G + K GR
Sbjct: 14 PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNG-MCKEGRLDEAIK 72
Query: 366 -------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHY 416
G P V I + + G+ +DA K + ++ +G +N +++
Sbjct: 73 FLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINF 130
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 143/323 (44%), Gaps = 28/323 (8%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDE 206
N+++K C+ + L L + P+ + Y LI G C G+ A ++ +LM D
Sbjct: 432 NELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDR 491
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQ 266
G P MI++ K + +EA +F + K ++ + Y +ID CK GK+ +
Sbjct: 492 GLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNP-NVVMYTALIDGYCKAGKVDE 550
Query: 267 AYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIK 322
A+ MLE+M + ++LT +++I+GL A G+L+EA + E++ K P +S LI
Sbjct: 551 AHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIH 610
Query: 323 GLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGL 382
LL+ A F++M+ G +P HTY T F+
Sbjct: 611 RLLKDGDFDHAYSRFQQMLSSGTKPDAHTY-----------------------TTFIQTY 647
Query: 383 VKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLA 442
+ G+ LDA + ++ GV F Y+ + Y + +V K++R+ G
Sbjct: 648 CREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQ 707
Query: 443 DIFQRYGKKMATRERRRNRAIEP 465
F K + + + + EP
Sbjct: 708 HTFLSLIKHLLEMKYGKQKGSEP 730
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 103/453 (22%), Positives = 193/453 (42%), Gaps = 65/453 (14%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEM---GRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
T+ ++ + +++D ++ EM G RR N+ + + L R + + ++ F
Sbjct: 255 TYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRR--NEVAYTHLIHGLCVARRIDEAMDLFV 312
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVG 191
M D C ++ ++K+LC + EA L+ ++ E IKPN Y LI C
Sbjct: 313 KMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQC 372
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD------ 245
+A ++ M ++G P++ + +I + K ++A+ V ++M +++
Sbjct: 373 KFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYN 432
Query: 246 --------------LG-------------LSTYRIVIDWMCKRGKISQAYTMLEEMFKRG 278
+G + TY +ID C+ G AY +L M RG
Sbjct: 433 ELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRG 492
Query: 279 IEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREAT 334
+ D T +S+I L R+ EA + + +E+ P++ +Y LI G + + EA
Sbjct: 493 LVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAH 552
Query: 335 QVFREMIKRGCEPTMHTYIMLLQGHLG------------KRGRKGPDPLVNFDTIFVGGL 382
+ +M+ + C P T+ L+ G K + G P V+ DTI + L
Sbjct: 553 LMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRL 612
Query: 383 VKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLA-DL 441
+K G A +++++ G + Y F+ Y E ++ E++ K+RE G++ DL
Sbjct: 613 LKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDL 672
Query: 442 ---ADIFQRYGKKMATR------ERRRNRAIEP 465
+ + + YG T +R R+ EP
Sbjct: 673 FTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEP 705
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 110/255 (43%), Gaps = 17/255 (6%)
Query: 179 AYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
Y L+ G + E +++ M ++ P+I +KM+ + K+ +EA + +
Sbjct: 185 CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKI 244
Query: 239 RVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR 298
V+ D TY +I C+R + A+ + EM +G + + + +I+GL R
Sbjct: 245 -VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARR 303
Query: 299 LREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIM 354
+ EA + +++ P + Y LIK L R EA + +EM + G +P +HTY +
Sbjct: 304 IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTV 363
Query: 355 LLQG------------HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
L+ LG+ KG P V + G K G DA VE + +R
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK 423
Query: 403 VEVPRFDYNKFLHYY 417
+ YN+ + Y
Sbjct: 424 LSPNTRTYNELIKGY 438
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 113/257 (43%), Gaps = 24/257 (9%)
Query: 183 LIKGYCDVGDLIEASKIWNLMT-DEGFEPS----IDVVDKMIETFFKINKDDEAMKVFQM 237
+IK VGD + + M DE FE I + ++ + + DE +V+
Sbjct: 149 MIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYME 208
Query: 238 MRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
M ++ + TY +++ CK G + +A + ++ + G++ D T +S+I G R
Sbjct: 209 MLEDKVCP-NIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRK 267
Query: 298 RLREAYKVVEEI-----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
L A+KV E+ + +++ H LI GL RR EA +F +M C PT+ TY
Sbjct: 268 DLDSAFKVFNEMPLKGCRRNEVAYTH-LIHGLCVARRIDEAMDLFVKMKDDECFPTVRTY 326
Query: 353 IMLLQGHLGKRGRK------------GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMN 400
+L++ G + G P ++ T+ + L K A + + +++
Sbjct: 327 TVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLE 386
Query: 401 RGVEVPRFDYNKFLHYY 417
+G+ YN ++ Y
Sbjct: 387 KGLMPNVITYNALINGY 403
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 105/249 (42%), Gaps = 60/249 (24%)
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRK---------------------LVVEAKYLILKLSEW 172
M D GCE S ++K L + K VVE L+ K+ E
Sbjct: 698 MRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVE---LLEKMVEH 754
Query: 173 -IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT-DEGFEPSIDVVDKMIETFFKINKDDE 230
+ PN +Y LI G C+VG+L A K+++ M +EG PS V + ++ K+ K +E
Sbjct: 755 SVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNE 814
Query: 231 AMKVF-QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSI 289
A KV M+ V + L + +++I + K+G+ + ++ + + + G D L I
Sbjct: 815 AAKVVDDMICVGHLPQ--LESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKII 872
Query: 290 IYGLLARGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
I G+ +G + Y ++F M K GC+ +
Sbjct: 873 IDGVGKQGLVEAFY-------------------------------ELFNVMEKNGCKFSS 901
Query: 350 HTYIMLLQG 358
TY +L++G
Sbjct: 902 QTYSLLIEG 910
>gi|124360736|gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
Length = 479
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 157/349 (44%), Gaps = 43/349 (12%)
Query: 18 QQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSI-T 76
Q+ P + + + +T + FL IC + RP+ ++I
Sbjct: 64 NQFRPAEGMLERMKQEDCEVTEDVFLTICRGYGRVHRPL----------------DAIRV 107
Query: 77 FNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMND 136
F++M D K K++ L E +K+ + F+ M +
Sbjct: 108 FHKMEDFQVKP-------------------TQKSYLTVFDILVEENHVKRAIGFYKEMRE 148
Query: 137 CGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK--LSEWIKPNEIAYGWLIKGYCDVGDLI 194
G ++ LN ++K LC+ + VE+ + + + + +P+ YG LI G C +G +
Sbjct: 149 KGIPPTVVSLNILIKALCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKIS 208
Query: 195 EASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIV 254
+A ++ + M ++G PS+ +I + N DEA+++ + M + ++ + TY +
Sbjct: 209 QAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEP-NVFTYSSL 267
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE---- 310
+D +CK G SQA +LE M +R + + +T S++I GL G+ REA ++++ +
Sbjct: 268 MDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGL 327
Query: 311 KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
KPD +Y +I GL +EA EM G P ++ ++ H
Sbjct: 328 KPDAGMYGRIISGLCAACNYQEAANFIDEMALGGISPNRASWTFHVKMH 376
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 147/327 (44%), Gaps = 27/327 (8%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
+ TF + L V + + M CE + ++ + + + ++A +
Sbjct: 49 DHNTFGAMIHRLVSVNQFRPAEGMLERMKQEDCEVTEDVFLTICRGYGRVHRPLDAIRVF 108
Query: 167 LKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI 225
K+ ++ +KP + +Y + + + A + M ++G P++ ++ +I+ K
Sbjct: 109 HKMEDFQVKPTQKSYLTVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLNILIKALCK- 167
Query: 226 NKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEA 281
++ F++ R M + G TY +I+ +CK GKISQA +L+EM ++G+
Sbjct: 168 -NEETVESAFRLFR--EMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSP 224
Query: 282 DNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVF 337
++ +S+I+GL L EA +++EE+ +P++ Y L+ GL + + +A ++
Sbjct: 225 SVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELL 284
Query: 338 REMIKRGCEPTMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVK 384
M++R P M TY L+ G L K G+ +G P + GL
Sbjct: 285 EVMVRRRLLPNMVTYSTLING-LCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCA 343
Query: 385 AGKSLDAAKYVERVMNRGVEVPRFDYN 411
A +AA +++ + G+ R +
Sbjct: 344 ACNYQEAANFIDEMALGGISPNRASWT 370
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 120/283 (42%), Gaps = 12/283 (4%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALM-TLAEVRELKKMVNFF 131
+S T+ +++ + K I E L EM + L +L+ L + L + +
Sbjct: 190 DSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELL 249
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDV 190
M G E ++ + ++ LC+ +A L+ + + + PN + Y LI G C
Sbjct: 250 EEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKE 309
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD------ 244
G EA +I + M +G +P + ++I EA M + +
Sbjct: 310 GKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACNYQEAANFIDEMALGGISPNRASW 369
Query: 245 DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK 304
+ + +V+ +C ++A+ + M RGI + T ++ RG L +A +
Sbjct: 370 TFHVKMHNMVVQGLCNNVDPTRAFQLYLSMRTRGISVEIGTFDCLVKCFCKRGDLNKAAR 429
Query: 305 VVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
++EE+ PD +++ L+ GL ++ RE T++ +K+
Sbjct: 430 ILEEMILDGCIPDEGMWNVLMCGLWDRKKVRETTELLVAELKQ 472
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 105/245 (42%), Gaps = 37/245 (15%)
Query: 179 AYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
+G +I V A + M E E + DV + + ++++ +A++VF
Sbjct: 52 TFGAMIHRLVSVNQFRPAEGMLERMKQEDCEVTEDVFLTICRGYGRVHRPLDAIRVFH-- 109
Query: 239 RVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
+M+D + +Y V D + + + +A +EM ++GI ++L+ +I L
Sbjct: 110 ---KMEDFQVKPTQKSYLTVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLNILIKALC 166
Query: 295 ARGRLRE-AYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
E A+++ E+ +PD Y LI GL +L + +A ++ EM ++G P++
Sbjct: 167 KNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSV 226
Query: 350 HTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFD 409
+Y T + GL ++ +A + +E ++ G+E F
Sbjct: 227 VSY-----------------------TSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFT 263
Query: 410 YNKFL 414
Y+ +
Sbjct: 264 YSSLM 268
>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 636
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 148/298 (49%), Gaps = 8/298 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N + +N ++D + K + + +E +M +++ D TF + V +L++ F
Sbjct: 207 NVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLF 266
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAK-YLILKLSEWIKPNEIAYGWLIKGYCDV 190
M N +V LC+ + AK L++ + E + PN + Y L+ GYC V
Sbjct: 267 REMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLV 326
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
+ +A + N ++ G P+ MI F KI DEA+ +F M+ K + + T
Sbjct: 327 NQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKV-T 385
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y +ID +CK G+IS A+ +++EM G A+ T + +I L + +A +V++I+
Sbjct: 386 YNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIK 445
Query: 311 ----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
+PD+ ++ LI GL ++ R + A VF++++ +G TY +++ G L K G
Sbjct: 446 DQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNG-LCKEG 502
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/383 (20%), Positives = 171/383 (44%), Gaps = 71/383 (18%)
Query: 73 NSITFNRMVD---IIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
++ITFN ++ + GK + F + + +G ++ ++ + L ++ E + +
Sbjct: 137 DTITFNTLIKGLCLNGKVKEALHFHDHVLALGFH--LDQFSYGTLINGLCKIGETRTALQ 194
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYC 188
++ + ++ M N ++ +LC+ KLV++A L ++ ++ I P+ + + LI G+C
Sbjct: 195 MLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFC 254
Query: 189 DVGDLIEASKIW---------------NLMTD--------------------EGFEPSID 213
VG L EA ++ N++ D EG P++
Sbjct: 255 IVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVV 314
Query: 214 VVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL-GLSTYRIVIDWMCKRGKISQAYTMLE 272
+++ + +N+ ++A V + +M +Y +I+ CK + +A ++
Sbjct: 315 TYSSLMDGYCLVNQVNKAKHVLN--TISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFN 372
Query: 273 EMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLR 328
+M +GI D +T +S+I GL GR+ A+++V+E+ + +I Y+ LI L +
Sbjct: 373 DMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNH 432
Query: 329 RAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKS 388
+A + +++ +G +P M+T+ I + GL K G+
Sbjct: 433 HVDQAIALVKKIKDQGIQPDMYTF-----------------------NILIYGLCKVGRL 469
Query: 389 LDAAKYVERVMNRGVEVPRFDYN 411
+A + ++++G V + YN
Sbjct: 470 KNAQDVFQDLLSKGYSVNAWTYN 492
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 107/259 (41%), Gaps = 21/259 (8%)
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
+P+ I + LIKG C G + EA + + GF +I KI + A+
Sbjct: 135 EPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTAL- 193
Query: 234 VFQMMRV--KRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
QM+R ++ + + Y +ID +CK + AY + +M + I D +T S++IY
Sbjct: 194 --QMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIY 251
Query: 292 GLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
G G+L EA+ + E+ PD ++ L+ L + + A + M+K G P
Sbjct: 252 GFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMP 311
Query: 348 TMHTYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYV 395
+ TY L+ G+ L + G P + + G K +A
Sbjct: 312 NVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLF 371
Query: 396 ERVMNRGVEVPRFDYNKFL 414
+ +G+ + YN +
Sbjct: 372 NDMQFKGIAPDKVTYNSLI 390
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 110/246 (44%), Gaps = 7/246 (2%)
Query: 73 NSITFNRMVD---IIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
N +T++ ++D ++ + T+ +MG N ++ + +++ + + ++
Sbjct: 312 NVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAP--NAHSYCTMINGFCKIKMVDEALS 369
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEI-AYGWLIKGYC 188
F+ M G N ++ LC+ + A L+ ++ + +P I Y LI C
Sbjct: 370 LFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALC 429
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
+ +A + + D+G +P + + +I K+ + A VFQ + K +
Sbjct: 430 KNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYS-VNA 488
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY I+++ +CK G +A +L +M GI D +T ++I L + +A K++ E
Sbjct: 489 WTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLRE 548
Query: 309 IEKPDI 314
+ D+
Sbjct: 549 MIARDV 554
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 90/200 (45%), Gaps = 5/200 (2%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
I P+ + LI YC + ++ A + + G+EP + +I+ K EA+
Sbjct: 99 ITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEAL 158
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
F + L +Y +I+ +CK G+ A ML ++ + ++ + + ++II
Sbjct: 159 H-FHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDS 217
Query: 293 LLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
L + +AY++ ++ PD+ + LI G + + EA +FREM+ + P
Sbjct: 218 LCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPD 277
Query: 349 MHTYIMLLQGHLGKRGRKGP 368
+T+ +L+ + KG
Sbjct: 278 YYTFNILVDALCKEGNLKGA 297
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 76/170 (44%), Gaps = 2/170 (1%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALMTLAEVRELKKMVN 129
A + +T+N ++D + KS I WE + EM + N T+ + L + + + +
Sbjct: 380 APDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIA 439
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYC 188
+ D G + + N ++ LC+ + A+ + LS+ N Y ++ G C
Sbjct: 440 LVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLC 499
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
G EA + + M D G P + +I+ F +++++A K+ + M
Sbjct: 500 KEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREM 549
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 167/377 (44%), Gaps = 21/377 (5%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMT 117
FQ +++P I F+R+ ++ +++ DL + ++M + + N T I +
Sbjct: 59 LFQEMTRSRP--RPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINC 116
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPN 176
R+L + + G E + ++ LC V EA L+ ++ E KP
Sbjct: 117 CCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPT 176
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
I L+ G C G + +A + + M + GF+P+ +++ K + AM++ +
Sbjct: 177 LITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLR 236
Query: 237 MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR 296
M +++ L Y I+ID +CK G + A+ + EM +G +AD + +++I G
Sbjct: 237 KMEERKI-KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYA 295
Query: 297 GRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
GR + K++ ++ K PD+ + LI ++ + REA ++ +EMI+RG P TY
Sbjct: 296 GRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTY 355
Query: 353 IMLLQG-----HLGKRGR-------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMN 400
L+ G L K KG P + I + G KA D + ++
Sbjct: 356 TSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSL 415
Query: 401 RGVEVPRFDYNKFLHYY 417
RGV YN + +
Sbjct: 416 RGVVADTVTYNTLIQGF 432
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 166/389 (42%), Gaps = 21/389 (5%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKT-FKIALMTLAEVRELKKMV 128
F N +T+ ++ ++ KS L E L++M R++ D + I + L + L
Sbjct: 208 FQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAF 267
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLC-QRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGY 187
N F+ M G + + + +++ C + AK L + I P+ +A+ LI +
Sbjct: 268 NLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCF 327
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
G L EA ++ M G P +I+ F K N+ D+A + +M V +
Sbjct: 328 VKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM-VSKGCGPN 386
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
+ T+ I+I+ CK I + +M RG+ AD +T +++I G G+L A ++ +
Sbjct: 387 IRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQ 446
Query: 308 EIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
E+ +PDI Y L+ GL +A ++F ++ K E + Y +++ G
Sbjct: 447 EMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 506
Query: 364 G------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPR-FDY 410
KG P V I +GGL K G SL A + R M P Y
Sbjct: 507 KVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKG-SLSEADLLFRKMEEDGHSPNGCTY 565
Query: 411 NKFLHYYSNEEGVVMFEEVGKKLREVGLA 439
N + + E ++ ++++ G +
Sbjct: 566 NILIRAHLGEGDATKSAKLIEEIKRCGFS 594
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 130/295 (44%), Gaps = 24/295 (8%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFF 131
+++T+N ++ + +++ E QEM RR+ D ++KI L L + E +K + F
Sbjct: 421 DTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIF 480
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDV 190
+ E + + N ++ +C V +A L L + +KP+ Y +I G C
Sbjct: 481 EKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKK 540
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD-DLGLS 249
G L EA ++ M ++G P+ + +I ++ K+ + +KR + S
Sbjct: 541 GSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIE--EIKRCGFSVDAS 598
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII--YGLLARGRLREAYKVVE 307
T R A + L M K G E D T ++++ + L + +A + +
Sbjct: 599 TLRF-------------ALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFK 645
Query: 308 EIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
++ KP++ Y+ +IKGLL + V +M +RGC+P T + G
Sbjct: 646 NMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISG 700
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 18/214 (8%)
Query: 195 EASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIV 254
+A ++ MT P + ++ + + D + + + M +K + L T I+
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAH-NLYTLSIM 113
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----E 310
I+ C+ K+S A++ + ++ K G E D +T S++I GL GR+ EA ++V+ +
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 311 KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY-----IMLLQGHLG---K 362
KP + + L+ GL + +A + M++ G +P TY +M G +
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 363 RGRKGPDPLVNFD----TIFVGGLVKAGKSLDAA 392
RK + + D +I + GL K G SLD A
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDG-SLDNA 266
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 166/350 (47%), Gaps = 27/350 (7%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+ + ++D + K R + + +M + + D T+ + L + E K + +
Sbjct: 197 VIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQ 256
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGD 192
M + + + + VV LC+ V EA ++ + + ++P+ + Y L+ G+C +
Sbjct: 257 MVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSE 316
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLSTY 251
+ EA K++++M +GF P + +I + KI+K D+AM +F +M R + + D TY
Sbjct: 317 MDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPD--TKTY 374
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE- 310
++ +C G++ A + EM RG D +T S ++ L L EA +++ IE
Sbjct: 375 NTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEA 434
Query: 311 ---KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG--- 364
PDI +Y+ +I G+ R A +F + +G P++ TY +++ G L KRG
Sbjct: 435 SNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHG-LCKRGLLN 493
Query: 365 ------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
PD ++TI G ++ ++L A + +E ++ RG
Sbjct: 494 EANKLFMEMDGNDCSPDG-CTYNTI-ARGFLQNNETLRAIQLLEEMLARG 541
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/401 (23%), Positives = 176/401 (43%), Gaps = 44/401 (10%)
Query: 55 PVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIA 114
P FF +Q F S+ FN + D + F L +V+ F
Sbjct: 15 PPLPFFSSSQNN---FHSKSLHFNTLDDALSS------FNRLLHMHPPPSIVD---FAKL 62
Query: 115 LMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLV-----VEAKYLILKL 169
L ++A+++ +++ M+ G ++ LN ++ + C V V AK ILKL
Sbjct: 63 LTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAK--ILKL 120
Query: 170 SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD 229
+P+ + LI+G C G + EA +++ M DEGF+P++ +I K+
Sbjct: 121 GH--QPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTS 178
Query: 230 EAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSI 289
A+++ + M + Y +ID +CK ++++A+ + +M +GI D T +S+
Sbjct: 179 AAIRLLRSMEQGNCQP-DVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSL 237
Query: 290 IYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGC 345
++ L + ++ ++ PD+ ++ ++ L + + EA ++ MI+RG
Sbjct: 238 VHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGV 297
Query: 346 EPTMHTYIMLLQGHLGKRG------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAK 393
EP + TY L+ GH + RKG P V T + G K K +D A
Sbjct: 298 EPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHK-IDKAM 356
Query: 394 YVERVMNRGVEVPRF-DYNKFLHYYSN----EEGVVMFEEV 429
Y+ M R +P YN +H + ++ + +F E+
Sbjct: 357 YLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEM 397
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 147/326 (45%), Gaps = 18/326 (5%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
N T+ + L +V + M C+ + + ++ +LC+ + V EA L
Sbjct: 160 NVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLF 219
Query: 167 LKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI 225
++ + I P+ Y L+ C++ + + + N M + P + + +++ K
Sbjct: 220 SQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKE 279
Query: 226 NKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
K EA ++ MM ++R + + TY ++D C + ++ +A + + M ++G D ++
Sbjct: 280 GKVTEAHEIVDMM-IQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVIS 338
Query: 286 LSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMI 341
+++I G ++ +A + EE+ + PD Y+ L+ GL + R ++A +F EM+
Sbjct: 339 YTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMV 398
Query: 342 KRGCEPTMHTYIMLLQG-----HLGKR-------GRKGPDPLVNFDTIFVGGLVKAGKSL 389
RG P + TY +LL HL + +P + I + G+ +AG+
Sbjct: 399 ARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELE 458
Query: 390 DAAKYVERVMNRGVEVPRFDYNKFLH 415
A + ++G+ + YN +H
Sbjct: 459 AARDLFSNLSSKGLHPSVWTYNIMIH 484
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 134/290 (46%), Gaps = 9/290 (3%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVR-ELKKMVNFFHI 133
+ F+ +VD + K + E + M +R + D LM ++ E+ + V F +
Sbjct: 267 VIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDM 326
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS--EWIKPNEIAYGWLIKGYCDVG 191
M G + ++ C+ + +A YL ++ EWI P+ Y L+ G C VG
Sbjct: 327 MVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWI-PDTKTYNTLMHGLCHVG 385
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTY 251
L +A +++ M G P + ++++ K +EAM + + + ++ + Y
Sbjct: 386 RLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNP-DIQVY 444
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE- 310
I+ID MC+ G++ A + + +G+ T + +I+GL RG L EA K+ E++
Sbjct: 445 NIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDG 504
Query: 311 ---KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
PD Y+ + +G L+ A Q+ EM+ RG + T +L++
Sbjct: 505 NDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVE 554
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 105/406 (25%), Positives = 176/406 (43%), Gaps = 69/406 (16%)
Query: 78 NRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIMND 136
N M+ + KS + W EM R R+ + TF I + L + +LKK F +M
Sbjct: 160 NDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEA 219
Query: 137 CGCEYSLEMLNKVVKTLCQRKLVV-----------------------------------E 161
G + ++ N ++ C R V E
Sbjct: 220 LGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEE 279
Query: 162 AKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIE 220
A ++ K+ E ++P + Y LI GYC+ G+L A + M EG P++ + +I
Sbjct: 280 ASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIH 339
Query: 221 TFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFK 276
F K DEA + +K M + GL TY I+I+ C+ G + +A+T+ +EM
Sbjct: 340 ALFLDCKMDEADGI-----IKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMIS 394
Query: 277 RGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRARE 332
+GI+ +T +S+IY L RGR+++A + E+I + PD+ +++ LI G
Sbjct: 395 KGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDR 454
Query: 333 ATQVFREMIKRGCEPTMHTYIMLLQG---------------HLGKRGRKGPDPLVNFDTI 377
A + +EM + P T+ L+QG + RG K PD ++++T+
Sbjct: 455 AFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIK-PDH-ISYNTL 512
Query: 378 FVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH-YYSNEEG 422
+ G K G DA + + +++ G YN + NEEG
Sbjct: 513 -ISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEG 557
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 115/237 (48%), Gaps = 39/237 (16%)
Query: 161 EAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMI 219
EA +I ++SE + P+ + Y LI GYC G++ +A + + M +G +P+ +I
Sbjct: 349 EADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLI 408
Query: 220 ETFFKINKDDEAMKVFQMM------------------------------RVKRMDDLGLS 249
K + +A +F+ + +K MD + +
Sbjct: 409 YVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVV 468
Query: 250 ----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
T+ ++ C+ GK+ A ++EEM RGI+ D+++ +++I G RG +++A++V
Sbjct: 469 PDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRV 528
Query: 306 VEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+E+ P + Y+ LI+GL + A Q+ +EMI +G P +TY+ L++G
Sbjct: 529 RDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEG 585
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 122/256 (47%), Gaps = 17/256 (6%)
Query: 178 IAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQM 237
+ Y LI+ C++ +A + +++M +G P + + M+ F K N+ ++A ++
Sbjct: 122 VLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAE 181
Query: 238 MRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
M R+ + T+ I+I+ +CK GK+ +A + M GI+ + +T ++II+G +RG
Sbjct: 182 MFRMRIKS-SVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRG 240
Query: 298 RLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYI 353
R+ A + + ++ KPD Y I G+ + + EA+ + +M + G PT TY
Sbjct: 241 RVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYN 300
Query: 354 MLLQGHLGKRG------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNR 401
L+ G+ K R+G P V+ + + L K +A ++ + +
Sbjct: 301 TLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEK 360
Query: 402 GVEVPRFDYNKFLHYY 417
G+ YN ++ Y
Sbjct: 361 GLVPDSVTYNILINGY 376
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 99/225 (44%), Gaps = 29/225 (12%)
Query: 216 DKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMF 275
D +I ++ + D+A + F MM+ K + + ++ K + +A+ + EMF
Sbjct: 125 DLLIRACCELKRGDDAFECFDMMKGKGVIP-HVHACNDMLSLFLKSNRTEKAWVLYAEMF 183
Query: 276 KRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAR 331
+ I++ +T + +I L G+L++A + + +E KP++ Y+ +I G R
Sbjct: 184 RMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVE 243
Query: 332 EATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDA 391
A +F M RG +P +TY F+ G+ K GK +A
Sbjct: 244 GARMIFDLMKCRGVKPDSYTY-----------------------GSFISGMCKEGKLEEA 280
Query: 392 AKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVM-FEEVGKKLRE 435
+ +E++ G+ YN + Y N+ + M F+ K +RE
Sbjct: 281 SGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVRE 325
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 87/220 (39%), Gaps = 71/220 (32%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIM 134
I FN ++D + N+D + L+EM + ++V D+ V F
Sbjct: 437 IMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDE------------------VTF---- 474
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDL 193
N +++ C+ V A+ LI ++ S IKP+ I+Y LI GY GD+
Sbjct: 475 ------------NTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDM 522
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
+A ++ + M GF P+ L TY
Sbjct: 523 KDAFRVRDEMLSIGFNPT------------------------------------LLTYNA 546
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
+I +CK + A +L+EM +GI ++ T S+I G+
Sbjct: 547 LIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGI 586
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 162/362 (44%), Gaps = 21/362 (5%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHIM 134
T N ++ + K + W EM R R+ + TF I + L + +LKK +F M
Sbjct: 188 TCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHM 247
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDL 193
G + ++ N +V C V A ++ + + I+P+ YG LI G C G L
Sbjct: 248 ETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRL 307
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
EASKI+ M +G PS + + +I+ F D A ++ +K+ +STY
Sbjct: 308 EEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMA-SAYKDEMLKKGISPTMSTYNS 366
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE--- 310
+I + + +A M++E+ ++GI D +T + +I G ++A+ + +E+
Sbjct: 367 LIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASG 426
Query: 311 -KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKG-- 367
KP Y L+ L + R +EA +F+++ G P + + L+ GH KG
Sbjct: 427 IKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAF 486
Query: 368 -----------PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHY 416
P V F+TI + G + GK +A + + + RG++ +N +
Sbjct: 487 ELLKDMDRMKVPPDEVTFNTI-MQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISG 545
Query: 417 YS 418
YS
Sbjct: 546 YS 547
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 127/258 (49%), Gaps = 17/258 (6%)
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
+ I + +LIK CD+ EA + + M ++G P+I+ + ++ F K+N+ + A ++
Sbjct: 150 SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLY 209
Query: 236 QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
M R+ + T+ I+I+ +CK GK+ +A + M G++ + +T ++I++G +
Sbjct: 210 AEMFRLRIKS-SVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCS 268
Query: 296 RGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
GR+ A ++ +++ PD Y LI G+ + R EA+++F EM+++G P+
Sbjct: 269 SGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVI 328
Query: 352 YIMLLQGHLGKRG------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVM 399
Y L+ G K +KG P ++ + L ++ +A ++ +
Sbjct: 329 YNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQ 388
Query: 400 NRGVEVPRFDYNKFLHYY 417
+G+ YN ++ Y
Sbjct: 389 EKGISPDAITYNILINGY 406
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 120/260 (46%), Gaps = 39/260 (15%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEA 196
G ++ N ++ L + EA+ +I ++ E I P+ I Y LI GYC + +A
Sbjct: 356 GISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKA 415
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR----------------- 239
+ + M G +P+ ++ K N+ EA +F+ +
Sbjct: 416 FLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDG 475
Query: 240 -------------VKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEAD 282
+K MD + + T+ ++ C+ GK+ +A + +EM +RGI+ D
Sbjct: 476 HCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPD 535
Query: 283 NLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFR 338
+++ +++I G RG +++A++V E+ P + Y+ L++GL + + A ++ +
Sbjct: 536 HISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLK 595
Query: 339 EMIKRGCEPTMHTYIMLLQG 358
EM+ +G P TY L++G
Sbjct: 596 EMVSKGMTPDDTTYFTLIEG 615
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 86/186 (46%), Gaps = 2/186 (1%)
Query: 109 KTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK 168
KT+ L L++ +K+ + F + G + M N ++ C V A L+
Sbjct: 432 KTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKD 491
Query: 169 LSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINK 227
+ + P+E+ + +++G+C G + EA ++++ M G +P + +I + +
Sbjct: 492 MDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGD 551
Query: 228 DDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLS 287
+A +V M + L TY ++ +CK + A +L+EM +G+ D+ T
Sbjct: 552 IKDAFRVRNEMLDTGFNPTVL-TYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYF 610
Query: 288 SIIYGL 293
++I G+
Sbjct: 611 TLIEGI 616
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 194/424 (45%), Gaps = 32/424 (7%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
++ ++ T ++ + KS I+ ++++ + L + TF I + L +
Sbjct: 12 YSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLCDISTFNIYISGLCRASRIGDAQT 71
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYC 188
F M G + N ++ LC + +A+ L ++ P+ + Y L+ G+C
Sbjct: 72 VFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFC 131
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
VG L EA KI++ GF P + + +I F K +K DEA ++ Q M + + +
Sbjct: 132 KVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVP-DV 190
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR-GRLREAYKVVE 307
TY +++ +CK G++ +A ++ + +G + +T S++I GL RL A +++E
Sbjct: 191 VTYNSLVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRRLESARQLLE 247
Query: 308 EIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
++ KPDI Y+ LI GL R + EA ++F ++++G EP + TY +L+ G L +
Sbjct: 248 KMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKED 307
Query: 364 G------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
+ G +P T+F+ GL KAG+ DA ++ + +G +N
Sbjct: 308 RVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHN 367
Query: 412 KFLHYYSNEEGVVMFEEVGKKLREVGLADLADIFQ----------RYGKKMATRERRRNR 461
++ E+ V E + + G + A F ++ K M T + R
Sbjct: 368 AVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKR 427
Query: 462 AIEP 465
++P
Sbjct: 428 GVKP 431
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 174/371 (46%), Gaps = 32/371 (8%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND----KTFKIALMTLAEVRELK 125
F + +T+N +++ K+ +D LQ M LV D + L V E +
Sbjct: 151 FVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEAR 210
Query: 126 KMVNFFHIMNDCGCEYSLEMLNKVVKTLCQ--RKLVVEAKYLILKLSEWIKPNEIAYGWL 183
++ D G ++ + ++ LC+ R+L + L + KP+ ++Y L
Sbjct: 211 MLIV------DKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNAL 264
Query: 184 IKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM 243
I G + EA K++ + +G+EP + + +I+ K ++ +EA ++F + VK
Sbjct: 265 IHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGL-VKHG 323
Query: 244 DDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
+ TY + ID +CK G++ A ML++M ++G D ++ +++I GL R+ EA
Sbjct: 324 LEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAE 383
Query: 304 KVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
++ +E P+ ++ LI G R + ++A F+EM+KRG +PT+ TY +L+ G
Sbjct: 384 VLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGL 443
Query: 360 LGKR--GR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVE 404
R GR KG P V + + GL KAGK DA + + + +G
Sbjct: 444 CKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCI 503
Query: 405 VPRFDYNKFLH 415
+ YN +
Sbjct: 504 PNVYTYNSLIS 514
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 138/293 (47%), Gaps = 12/293 (4%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIM 134
T+N ++D + K ++ +E + + L D T+ + + L + ++ + M
Sbjct: 295 TYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDM 354
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDL 193
++ GC + N V+ LC+ K V EA+ L+ + ++ PN I++ LI G C G
Sbjct: 355 DEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKW 414
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD---EAMKVFQMMRVK-RMDDLGLS 249
+A + M G +P++ + +++ K ++ EA+ +F M K R+ D+
Sbjct: 415 KKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDV--V 472
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV-VEE 308
TY +ID + K GK+ A +L M +G + T +S+I GL ++ EA ++ V
Sbjct: 473 TYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAM 532
Query: 309 IEK---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+EK PD Y +I L + +A +F ++ G PT Y L+ G
Sbjct: 533 VEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDG 585
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 142/302 (47%), Gaps = 11/302 (3%)
Query: 70 FAHNSITFNRMVDIIGKS-RNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKM 127
F+ N IT++ ++ + + R ++ + L++M D ++ + LA + + +
Sbjct: 218 FSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEA 277
Query: 128 VNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKG 186
+ F + G E + N ++ L + V EA L L ++P+ I Y I G
Sbjct: 278 LKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDG 337
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
C G + +A + M ++G P + + +I K + DEA + M K
Sbjct: 338 LCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPN 397
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL-AR--GRLREAY 303
+S + +I C+ GK +A T +EM KRG++ +T + ++ GL AR GR++EA
Sbjct: 398 AIS-FNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAI 456
Query: 304 KVVEE-IEK---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
+ + IEK PD+ Y LI GL + + +A ++ M +GC P ++TY L+ G
Sbjct: 457 TLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGL 516
Query: 360 LG 361
G
Sbjct: 517 CG 518
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 101/218 (46%), Gaps = 17/218 (7%)
Query: 65 KAQPCFAHNSITFNRMVDIIGKSRNIDLFWE----TLQEMGRRRL-VNDKTFKIALMTLA 119
+A+ C + N+I+FN + I G+ R W+ T +EM +R + T+ I + L
Sbjct: 390 EAKGC-SPNAISFNTL--ICGQCRAGK--WKKAMTTFKEMLKRGVKPTVVTYNILVDGLC 444
Query: 120 EVRE---LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKP 175
+ R+ +K+ + F M + G + + ++ L + + +A+ L+ + ++ P
Sbjct: 445 KARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIP 504
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
N Y LI G C + + EA +++ M ++G P +I K D+A+ +F
Sbjct: 505 NVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALF 564
Query: 236 Q-MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLE 272
+ + G+ Y +ID +C ++ +A +L+
Sbjct: 565 DGSLEAGVVPTSGM--YFSLIDGLCAVARVDEALKLLQ 600
>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Brachypodium distachyon]
Length = 877
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/426 (22%), Positives = 174/426 (40%), Gaps = 56/426 (13%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHI 133
+T+ ++ +G+ +++ L EM RRL N + + + L + R + +
Sbjct: 330 VTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQ 389
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGD 192
M GC+ + ++ LCQ V EA+ L+ + + W + PN +Y LI G+C G+
Sbjct: 390 MFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGE 449
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM-DDLGLSTY 251
+I AS + M + G P + +I + EA+ V + M +++ D + Y
Sbjct: 450 VIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANI--Y 507
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK 311
++I +CK+ + A ++EEM ++ + D +++I G + L EA K+ E +E+
Sbjct: 508 NVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQ 567
Query: 312 ----PDISLYHGLIKGLLRLRRAREATQVFR----------------------------- 338
PD+ Y+ +IKG + EA +
Sbjct: 568 KGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISG 627
Query: 339 ------EMIKRGCEPTMHTYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVG 380
+M+KR C+P + Y L+ G+ G +G P V TI +G
Sbjct: 628 ALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIG 687
Query: 381 GLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLAD 440
L K K + AA Y E ++ + + + N ++ + G
Sbjct: 688 SLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKGA 747
Query: 441 LADIFQ 446
L DIF+
Sbjct: 748 LLDIFR 753
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 132/293 (45%), Gaps = 20/293 (6%)
Query: 149 VVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEG 207
+V+ LC LV + LI + PN + Y LI GYC GD+ + M +G
Sbjct: 265 MVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKG 324
Query: 208 FEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQA 267
P++ ++ + ++ + MR +R+ + Y VID +CK SQA
Sbjct: 325 LLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPP-NVQIYNSVIDALCKCRSASQA 383
Query: 268 YTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKG 323
+L++MF G + D +T S++I GL GR++EA +++ E + P++S Y LI G
Sbjct: 384 LVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHG 443
Query: 324 LLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL------------GKRGRKGPDPL 371
A+ + EM++RG P + T+ L+ G + K + P
Sbjct: 444 FCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPD 503
Query: 372 VNFDTIFVGGLVKAGKSLDAAK-YVERVMNRGVEVPRFDYNKFLHYYSNEEGV 423
N + + GL K K L AA+ +E ++ + V ++ Y + + E +
Sbjct: 504 ANIYNVLISGLCKK-KMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESL 555
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 75/177 (42%), Gaps = 18/177 (10%)
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
+PN +AY LI GYC +GD A ++ M +G P++ +I + FK +K A
Sbjct: 641 QPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAM 700
Query: 234 VFQMMRVKRMDDLGLSTYRIV----------IDWMCKRGKISQAYTMLEEMFKRGI---- 279
F+ M + + + + +V I C L ++F+ +
Sbjct: 701 YFEYMLLNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKGALLDIFRALVNDRC 760
Query: 280 EADNLTLSSIIYGLLARGRLREAY----KVVEEIEKPDISLYHGLIKGLLRLRRARE 332
+ N ++II+ L L EA K+ + KPD + + L+ G + ++RE
Sbjct: 761 DPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSLLYGFCSVGKSRE 817
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 167/377 (44%), Gaps = 21/377 (5%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMT 117
FQ +++P I F+R+ ++ +++ DL + ++M + + N T I +
Sbjct: 59 LFQEMTRSRP--RPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINC 116
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWI-KPN 176
R+L + + G E + ++ LC V EA L+ ++ E KP
Sbjct: 117 CCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPT 176
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
I L+ G C G + +A + + M + GF+P+ +++ K + AM++ +
Sbjct: 177 LITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLR 236
Query: 237 MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR 296
M +++ L Y I+ID +CK G + A+ + EM +G +AD + +++I G
Sbjct: 237 KMEERKI-KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYA 295
Query: 297 GRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
GR + K++ ++ K PD+ + LI ++ + REA ++ +EMI+RG P TY
Sbjct: 296 GRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTY 355
Query: 353 IMLLQG-----HLGKRGR-------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMN 400
L+ G L K KG P + I + G KA D + ++
Sbjct: 356 TSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSL 415
Query: 401 RGVEVPRFDYNKFLHYY 417
RGV YN + +
Sbjct: 416 RGVVADTVTYNTLIQGF 432
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 166/389 (42%), Gaps = 21/389 (5%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKT-FKIALMTLAEVRELKKMV 128
F N +T+ ++ ++ KS L E L++M R++ D + I + L + L
Sbjct: 208 FQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAF 267
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLC-QRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGY 187
N F+ M G + + + +++ C + AK L + I P+ +A+ LI +
Sbjct: 268 NLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCF 327
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
G L EA ++ M G P +I+ F K N+ D+A + +M V +
Sbjct: 328 VKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM-VSKGCGPN 386
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
+ T+ I+I+ CK I + +M RG+ AD +T +++I G G+L A ++ +
Sbjct: 387 IRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQ 446
Query: 308 EIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
E+ +PDI Y L+ GL +A ++F ++ K E + Y +++ G
Sbjct: 447 EMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 506
Query: 364 G------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPR-FDY 410
KG P V I +GGL K G SL A + R M P Y
Sbjct: 507 KVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKG-SLSEADLLFRKMEEDGHSPNGCTY 565
Query: 411 NKFLHYYSNEEGVVMFEEVGKKLREVGLA 439
N + + E ++ ++++ G +
Sbjct: 566 NILIRAHLGEGDATKSAKLIEEIKRCGFS 594
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 130/282 (46%), Gaps = 3/282 (1%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAE 120
+ + Q + +++T+ ++D K +D L M + N +TF I + +
Sbjct: 340 HKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCK 399
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIA 179
+ + F M+ G N +++ C+ + AK L ++ S ++P+ ++
Sbjct: 400 ANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVS 459
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
Y L+ G CD G+ +A +I+ + E I + + +I +K D+A +F +
Sbjct: 460 YKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP 519
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
+K + + TY I+I +CK+G +S+A + +M + G + T + +I L G
Sbjct: 520 LKGVKP-DVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDA 578
Query: 300 REAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMI 341
++ K++EEI++ S+ +K ++ + + F +M+
Sbjct: 579 TKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLKKSFLDML 620
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 18/214 (8%)
Query: 195 EASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIV 254
+A ++ MT P + ++ + + D + + + M +K + L T I+
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAH-NLYTLSIM 113
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----E 310
I+ C+ K+S A++ + ++ K G E D +T S++I GL GR+ EA ++V+ +
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 311 KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY-----IMLLQGHLG---K 362
KP + + L+ GL + +A + M++ G +P TY +M G +
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 363 RGRKGPDPLVNFD----TIFVGGLVKAGKSLDAA 392
RK + + D +I + GL K G SLD A
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDG-SLDNA 266
>gi|255578729|ref|XP_002530223.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530270|gb|EEF32170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 142/299 (47%), Gaps = 22/299 (7%)
Query: 79 RMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIA--------------LMTLAEVREL 124
RM D R D ++TL M + R D ++ L +L ++ +
Sbjct: 140 RMCD--SSPRVFDSLFKTLAHMKKFRNATDTFLQMKGYGFLPTVESCNAYLSSLLDLHRV 197
Query: 125 KKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWL 183
+ F+ M C ++ N V++ C+ + +A + ++ S I PN+ +Y L
Sbjct: 198 DIALAFYKEMRRCRISPNVYTRNMVMRAFCKSGKLEKAVQVFEEMESVGISPNDTSYNTL 257
Query: 184 IKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM 243
I GYC G L A K+ N M +G E ++ + +I+ F K K EA KVF M+V +
Sbjct: 258 IMGYCRKGLLNSAVKLKNSMRAKGVEANVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNV 317
Query: 244 DDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
+ TY +I+ + G + EEM + G++AD LT +++I GL G+ ++A
Sbjct: 318 APNTI-TYNTLINGHSQMGNSEMGRRLYEEMSRNGVKADILTYNALILGLCKEGKTKKAA 376
Query: 304 KVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+V+E++K P+ S + LI G + A Q+++ M++ GC P T+ ML+
Sbjct: 377 YMVKELDKENLVPNASTFSALISGQCIRNNSDRAFQLYKSMVRIGCHPNEQTFNMLVSA 435
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 111/243 (45%), Gaps = 18/243 (7%)
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
+ L K + A+ + M GF P+++ + + + +++ D A+ ++ MR
Sbjct: 149 FDSLFKTLAHMKKFRNATDTFLQMKGYGFLPTVESCNAYLSSLLDLHRVDIALAFYKEMR 208
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
R+ + T +V+ CK GK+ +A + EEM GI ++ + +++I G +G L
Sbjct: 209 RCRISP-NVYTRNMVMRAFCKSGKLEKAVQVFEEMESVGISPNDTSYNTLIMGYCRKGLL 267
Query: 300 REAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
A K+ + + ++ ++ LI G + + EA++VF EM P TY L
Sbjct: 268 NSAVKLKNSMRAKGVEANVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNTITYNTL 327
Query: 356 LQGH-------LGKR-----GRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
+ GH +G+R R G + + GL K GK+ AA Y+ + +++
Sbjct: 328 INGHSQMGNSEMGRRLYEEMSRNGVKADILTYNALILGLCKEGKTKKAA-YMVKELDKEN 386
Query: 404 EVP 406
VP
Sbjct: 387 LVP 389
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 106/275 (38%), Gaps = 38/275 (13%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
N T N ++ KS ++ + +EM + ND ++ +M L V
Sbjct: 215 NVYTRNMVMRAFCKSGKLEKAVQVFEEMESVGISPNDTSYNTLIMGYCRKGLLNSAVKLK 274
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDV 190
+ M G E ++ N ++ C+ + EA + ++ + PN I Y LI G+ +
Sbjct: 275 NSMRAKGVEANVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNTITYNTLINGHSQM 334
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMI----------------------------ETF 222
G+ +++ M+ G + I + +I TF
Sbjct: 335 GNSEMGRRLYEEMSRNGVKADILTYNALILGLCKEGKTKKAAYMVKELDKENLVPNASTF 394
Query: 223 FKI-------NKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMF 275
+ N D A ++++ M V+ T+ +++ CK A+ +L EMF
Sbjct: 395 SALISGQCIRNNSDRAFQLYKSM-VRIGCHPNEQTFNMLVSAFCKNEDFEGAFLVLMEMF 453
Query: 276 KRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
+R + LS I +GL G+ A K+ E++
Sbjct: 454 ERCFTPGSDVLSEIYHGLCCCGKEHLAMKLSSELK 488
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 154/296 (52%), Gaps = 15/296 (5%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
+++T+N ++ + K +D +E L+ + R D T+ I L TL + +
Sbjct: 242 DTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLI 301
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
M GC+ ++ + ++ TLC+ V EA L+ + E +KP+ Y LI G+C
Sbjct: 302 SEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCRE 361
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG--- 247
G L A++ M +G P I + ++ + K D+A++VF+ ++D++G
Sbjct: 362 GRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFE-----KLDEVGCPP 416
Query: 248 -LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
+S+Y + + G +A M+ ++ +GI+ D +T +S+I L G + EA +++
Sbjct: 417 NVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELL 476
Query: 307 EEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+++ +P++ Y+ ++ GL ++ RA +A +V M ++GC+P TYI+L++G
Sbjct: 477 VDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEG 532
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 153/325 (47%), Gaps = 19/325 (5%)
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCD 189
F M D G + + K++K + + +A ++ L + KP+ AY LI G+
Sbjct: 91 FLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYGKPDVFAYNALISGFIK 150
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
L A+++ + M GF P + + MI +F K D A+++F+ + +K + +
Sbjct: 151 ANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEEL-LKDNCEPTVI 209
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
TY I+I+ G I A +L+EM +G+E D LT ++II G+ + +A++++ +
Sbjct: 210 TYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSL 269
Query: 310 E----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
KPDI Y+ L++ LL + E ++ EMI GC+P + T+ +L+ G L + G+
Sbjct: 270 SSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILI-GTLCRDGK 328
Query: 366 -------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNK 412
KG P + G + G+ A +++E +++ G +YN
Sbjct: 329 VEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNT 388
Query: 413 FLHYYSNEEGVVMFEEVGKKLREVG 437
+ EV +KL EVG
Sbjct: 389 IMAGLCRTGKADQALEVFEKLDEVG 413
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 124/293 (42%), Gaps = 49/293 (16%)
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
E+ L+ C G E+ M D+G+ P + + K+I+ FF +A +V +
Sbjct: 69 EVHLMKLLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVME 128
Query: 237 MMR-----------------------------VKRMDDLG----LSTYRIVIDWMCKRGK 263
++ + RM G + TY I+I C RGK
Sbjct: 129 ILERYGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGK 188
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHG 319
+ A + EE+ K E +T + +I + G + A K+++E+ +PD Y+
Sbjct: 189 LDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNA 248
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK----RGRK--------G 367
+I+G+ + +A ++ R + RGC+P + TY +LL+ L + G K G
Sbjct: 249 IIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIG 308
Query: 368 PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE 420
P V +I +G L + GK +A + + +G++ + Y+ + + E
Sbjct: 309 CKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCRE 361
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 77/181 (42%), Gaps = 2/181 (1%)
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYC 188
F M GC + N ++ LC+ +A + KL E PN +Y L
Sbjct: 370 FLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALW 429
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
GD A ++ + ++G +P + +I + DEA+++ M+ R +
Sbjct: 430 SSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRP-NV 488
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
+Y I++ +CK + + A +L M ++G + + T +I G+ G EA ++
Sbjct: 489 VSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANS 548
Query: 309 I 309
+
Sbjct: 549 L 549
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 129/259 (49%), Gaps = 8/259 (3%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
N T+ I + L K+ ++ M GC+ + N +V C+ V A+ L+
Sbjct: 156 NVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLV 215
Query: 167 LKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI 225
+ E +KPN + + ++ G C G + +A K+++ M EG P + ++ + K+
Sbjct: 216 DMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKV 275
Query: 226 NKDDEAMKVF-QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNL 284
EA+ VF +M R M D + T+ +I MCK G + +A ++ EM +RG++ + +
Sbjct: 276 GCSHEALSVFAEMTRKGIMPD--VVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEI 333
Query: 285 TLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREM 340
T +++I G +G L +A V E+ +P + Y+ LI G + R EA ++ REM
Sbjct: 334 TFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREM 393
Query: 341 IKRGCEPTMHTYIMLLQGH 359
+G +P + TY +L +
Sbjct: 394 EAKGVKPDVVTYSTILSAY 412
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 146/333 (43%), Gaps = 33/333 (9%)
Query: 52 SWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKT 110
S + +F + T+K + +TF ++ ++ K+ N++ ++EM R L +N+ T
Sbjct: 278 SHEALSVFAEMTRKG---IMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEIT 334
Query: 111 FKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL- 169
F + + L + M C + S+ N ++ C + EA+ L+ ++
Sbjct: 335 FTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREME 394
Query: 170 SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD 229
++ +KP+ + Y ++ YC GD A ++ M + G P +I + +
Sbjct: 395 AKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLG 454
Query: 230 EAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
+A +F K M LGL TY +ID CK G + +A ++ +EM K G+ D +T
Sbjct: 455 DAHVLF-----KNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVT 509
Query: 286 LSSIIYGLLARGRLREA----YKVVEEIEKPDISLYHGL--------IKGLLRLRRA--- 330
S +I GL R +EA +K+ E P Y L +K +L L +
Sbjct: 510 YSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCM 569
Query: 331 ----REATQVFREMIKRGCEPTMHTYIMLLQGH 359
EA +V++ ++ R Y +L+ GH
Sbjct: 570 KGLMNEADKVYQSILDRNWNLDGSVYSVLIHGH 602
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 99/220 (45%), Gaps = 5/220 (2%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDE 206
N V+ L L ++ LS+ + PN Y L++ C G EA + M
Sbjct: 127 NAVLLALSDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGA 186
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQ 266
G +P+ + ++ F + + D A ++ MMR + L T+ V++ +CK G++
Sbjct: 187 GCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKP-NLVTFNSVVNGICKAGRMED 245
Query: 267 AYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIK 322
A + +EM K G+ D ++ ++++ G G EA V E+ + PD+ + LI
Sbjct: 246 ARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIH 305
Query: 323 GLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
+ + A + REM +RG + T+ L+ G K
Sbjct: 306 VMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKK 345
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 95/187 (50%), Gaps = 6/187 (3%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+ +AY ++ D L A + ++ M +G P++ + ++ EA+ V
Sbjct: 121 PSVLAYNAVLLALSD-ASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSV 179
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
+ MR D + TY ++ C+ G++ +A +++ M + G++ + +T +S++ G+
Sbjct: 180 LRDMRGAGCDPNAV-TYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGIC 238
Query: 295 ARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
GR+ +A KV +E+ K PD Y+ L+ G ++ + EA VF EM ++G P +
Sbjct: 239 KAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVV 298
Query: 351 TYIMLLQ 357
T+ L+
Sbjct: 299 TFTSLIH 305
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 88/213 (41%), Gaps = 50/213 (23%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
+ +++ LC+ K + +A L + S ++P+E+ Y LI G+C G++ A + + M
Sbjct: 441 SSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVK 500
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVF----------------QMMRVKRMDDL--- 246
G P + +I K + EA ++ +MR R +L
Sbjct: 501 AGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSV 560
Query: 247 ----------GL--------------------STYRIVIDWMCKRGKISQAYTMLEEMFK 276
GL S Y ++I C+ G + +A + ++M +
Sbjct: 561 LALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQ 620
Query: 277 RGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
G ++ + S+I GL +G + EA +V++++
Sbjct: 621 CGFAPNSTSTISLIRGLFEKGMVVEADQVIQQL 653
>gi|255568998|ref|XP_002525469.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535282|gb|EEF36959.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 581
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 166/360 (46%), Gaps = 23/360 (6%)
Query: 11 VCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCF 70
+ +IL+Q +P + + + C ++ E L++ + W + FF + + Q +
Sbjct: 100 IMSILHQLSGNP-VEMKNKIEHCGVKVSRELVLEVLSRIRNDWEAAFTFFLWAGR-QLGY 157
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRR----LVNDKTFKIALMTLAEVRELKK 126
+H+ ++ M+ I+GK R D W + EM + LV +T I + V ++ +
Sbjct: 158 SHSVREYHAMISILGKMRKFDTAWALIDEMRGVKTGISLVTPQTLLIMIRKYCAVHDVGR 217
Query: 127 MVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKG 186
+N F+ + ++ ++ LC+ K V +A++L+ + N ++ ++ G
Sbjct: 218 AINTFYAHKRFKFDLGIDEFQSLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIVLNG 277
Query: 187 YCDV-GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD 245
+C+V G EA +IW M + +I + +K KVF++ +M +
Sbjct: 278 WCNVIGSPREADRIWREMCKRRIHYDVVSYASIISCY---SKAGNLYKVFKL--YNQMKE 332
Query: 246 LGLST----YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
+G+ Y VI + K +S+A +++ M ++GI + +T +S+I L ++ E
Sbjct: 333 VGIEPDRKIYNSVIFALAKGRHVSEAINLMKTMEEKGIAPNTVTYNSLIKPLCRARKIDE 392
Query: 302 AYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
A + +E+ P I YH + LR E + M K GC PT+ TYIML++
Sbjct: 393 ARGLFDEMLQHGHSPTIRTYHAFFRS---LRTGEEVFALLENMRKLGCHPTIDTYIMLIR 449
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 120/253 (47%), Gaps = 21/253 (8%)
Query: 74 SITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTL-AEVRELKKMVNFFH 132
+I N ++IG R D W +EM +RR+ D ++++ ++ L K+ ++
Sbjct: 272 NIVLNGWCNVIGSPREADRIW---REMCKRRIHYDVVSYASIISCYSKAGNLYKVFKLYN 328
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVG 191
M + G E ++ N V+ L + + V EA L+ + E I PN + Y LIK C
Sbjct: 329 QMKEVGIEPDRKIYNSVIFALAKGRHVSEAINLMKTMEEKGIAPNTVTYNSLIKPLCRAR 388
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG---- 247
+ EA +++ M G P+I + FF+ + E +VF ++ + M LG
Sbjct: 389 KIDEARGLFDEMLQHGHSPTI----RTYHAFFRSLRTGE--EVFALL--ENMRKLGCHPT 440
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
+ TY ++I C+ + + + ++ + G+ D + +I+GL G+L EAYK
Sbjct: 441 IDTYIMLIRKFCRWRQFDDVFKLWNQISENGLGPDRSSYIVLIHGLFLNGKLEEAYKFYA 500
Query: 308 EIEK----PDISL 316
++++ PD L
Sbjct: 501 DMKEKQLLPDPKL 513
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 161/362 (44%), Gaps = 21/362 (5%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHIM 134
T N ++ + K + W EM R R+ + TF I + L + +LKK +F M
Sbjct: 188 TCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHM 247
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDL 193
G + ++ N +V C V A ++ + + I+P+ YG LI G C G L
Sbjct: 248 ETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRL 307
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
EASKI+ M +G PS + + +I+ F D A ++ +K+ +STY
Sbjct: 308 EEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMA-SAYKDEMLKKGISPTMSTYNS 366
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE--- 310
+I + + +A M++E+ ++GI D +T + +I G ++A+ + +E+
Sbjct: 367 LIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASG 426
Query: 311 -KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKG-- 367
KP Y L+ L + R +EA +F+++ G P + L+ GH KG
Sbjct: 427 IKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAF 486
Query: 368 -----------PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHY 416
P V F+TI + G + GK +A + + + RG++ +N +
Sbjct: 487 ELLKDMDRMKVPPDEVTFNTI-MQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISG 545
Query: 417 YS 418
YS
Sbjct: 546 YS 547
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 127/258 (49%), Gaps = 17/258 (6%)
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
+ I + +LIK CD+ EA + + M ++G P+I+ + ++ F K+N+ + A ++
Sbjct: 150 SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLY 209
Query: 236 QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
M R+ + T+ I+I+ +CK GK+ +A + M G++ + +T ++I++G +
Sbjct: 210 AEMFRLRIKS-SVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCS 268
Query: 296 RGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
GR+ A ++ +++ PD Y LI G+ + R EA+++F EM+++G P+
Sbjct: 269 SGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVI 328
Query: 352 YIMLLQGHLGKRG------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVM 399
Y L+ G K +KG P ++ + L ++ +A ++ +
Sbjct: 329 YNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQ 388
Query: 400 NRGVEVPRFDYNKFLHYY 417
+G+ YN ++ Y
Sbjct: 389 EKGISPDAITYNILINGY 406
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 120/260 (46%), Gaps = 39/260 (15%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEA 196
G ++ N ++ L + EA+ +I ++ E I P+ I Y LI GYC + +A
Sbjct: 356 GISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKA 415
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR----------------- 239
+ + M G +P+ ++ K N+ EA +F+ +
Sbjct: 416 FLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDG 475
Query: 240 -------------VKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEAD 282
+K MD + + T+ ++ C+ GK+ +A + +EM +RGI+ D
Sbjct: 476 HCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPD 535
Query: 283 NLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFR 338
+++ +++I G RG +++A++V E+ P + Y+ L++GL + + A ++ +
Sbjct: 536 HISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLK 595
Query: 339 EMIKRGCEPTMHTYIMLLQG 358
EM+ +G P TY L++G
Sbjct: 596 EMVSKGMTPDDTTYFTLIEG 615
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 85/186 (45%), Gaps = 2/186 (1%)
Query: 109 KTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK 168
KT+ L L++ +K+ + F + G M N ++ C V A L+
Sbjct: 432 KTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKD 491
Query: 169 LSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINK 227
+ + P+E+ + +++G+C G + EA ++++ M G +P + +I + +
Sbjct: 492 MDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGD 551
Query: 228 DDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLS 287
+A +V M + L TY ++ +CK + A +L+EM +G+ D+ T
Sbjct: 552 IKDAFRVRNEMLDTGFNPTVL-TYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYF 610
Query: 288 SIIYGL 293
++I G+
Sbjct: 611 TLIEGI 616
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 151/297 (50%), Gaps = 13/297 (4%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIM 134
+++N +++ +D + EMG V T+ + L + +E+ + + F M
Sbjct: 194 VSYNIVINGFFNEGQVDKAYSLFLEMGVSPDV--VTYNTIIDGLCKAQEVDRAEDVFQQM 251
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDL 193
+ G + + N ++ LC+ + V A+ + K+ + +KP+ + Y +I G C +
Sbjct: 252 VEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAV 311
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK--RMDDLGLSTY 251
A ++ M D G +P + +I+ K D+A VFQ M K + D+L TY
Sbjct: 312 DRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNL---TY 368
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE- 310
I+ID +CK + +A + ++M +G++ +N T + +I+G L+ G+ E + ++E+
Sbjct: 369 TIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSA 428
Query: 311 ---KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
+PD+ Y L+ L + + EA +F MI++G +P++ Y ++L G+ GK+G
Sbjct: 429 HDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGY-GKKG 484
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 160/326 (49%), Gaps = 42/326 (12%)
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW----IKPNEIAYGWLIKGYCD 189
M + GC + N ++K LC R+ EA+ L+ + + P+ ++Y +I G+ +
Sbjct: 146 MPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFN 205
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
G + K ++L + G P + + +I+ K + D A VFQ M K + +
Sbjct: 206 EG---QVDKAYSLFLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNV- 261
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
TY +ID +CK ++ A + ++M +G++ N+T ++II GL + A V +++
Sbjct: 262 TYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQM 321
Query: 310 ----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
KPD Y+ +I GL + + +A VF++MI +G +P TY
Sbjct: 322 IDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTY------------- 368
Query: 366 KGPDPLVNFDTIFVGGLVKAGKSLDAAKYV-ERVMNRGVEVPRFDYNKFLHYYSNEEGVV 424
TI + GL KA +S+D A+ V ++++++GV+ YN +H Y +
Sbjct: 369 ----------TIIIDGLCKA-QSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTG--- 414
Query: 425 MFEEVGKKLREVGLADL-ADIFQRYG 449
+EEV ++++E+ DL D+F YG
Sbjct: 415 QWEEVVQRIKEMSAHDLEPDVFT-YG 439
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 167/362 (46%), Gaps = 21/362 (5%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
+++T+ ++D + K++++D Q+M + + N+ T+ + + +++V
Sbjct: 364 DNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRI 423
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
M+ E + ++ LC+ EA+ L + + IKP+ YG ++ GY
Sbjct: 424 KEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKK 483
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G L E + NLM G P+ + + +I + K DE M +F M+ + + + T
Sbjct: 484 GALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSP-NVVT 542
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y +ID +CK G++ A +M G+ +N+ +S++YGL + + ++ E+
Sbjct: 543 YGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEML 602
Query: 311 ----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------- 359
+PDI ++ ++ L + R EA ++ M+ G +P + +Y L+ GH
Sbjct: 603 NQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMD 662
Query: 360 -----LGKRGRKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
L G P +V+++T+ + G KAG+ +A ++ +GV YN
Sbjct: 663 EAVKLLDGMVSAGLKPNIVSYNTL-LHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTI 721
Query: 414 LH 415
L+
Sbjct: 722 LN 723
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 148/297 (49%), Gaps = 10/297 (3%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKT-FKIALMTLAEVRELKKMVNFFHIM 134
T+ ++D + K+ + M R+ + T + I L + L +M + ++M
Sbjct: 437 TYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLM 496
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDL 193
G + + N V+ +R ++ E ++ +K+ + + PN + YG LI C +G +
Sbjct: 497 VANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRV 556
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLSTYR 252
+A +N M +EG P+ V + ++ ++K ++ ++F +M+ D+ +
Sbjct: 557 DDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVF--FN 614
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
V+ +CK G++ +A +++ M G++ D ++ +++I G R+ EA K+++ +
Sbjct: 615 TVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSA 674
Query: 311 --KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
KP+I Y+ L+ G + R A +FREM+++G P + TY +L G L + GR
Sbjct: 675 GLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNG-LFRSGR 730
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/328 (20%), Positives = 158/328 (48%), Gaps = 9/328 (2%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAE 120
+ Q + N++T+N ++D + K++ +D+ Q+M + + ++ T+ + L +
Sbjct: 248 FQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCK 307
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIA 179
+ + + F M D G + N ++ LC+ + + +A+ + ++ + +KP+ +
Sbjct: 308 AQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLT 367
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
Y +I G C + A ++ M D+G +P+ + +I + + +E ++ + M
Sbjct: 368 YTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMS 427
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
++ + TY +++D++CK GK ++A ++ + M ++GI+ +++G +G L
Sbjct: 428 AHDLEP-DVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGAL 486
Query: 300 REAYKVVEEIEKPDISLYHGLIKGLLRLRRAR----EATQVFREMIKRGCEPTMHTYIML 355
E + ++ + IS H + ++ R E +F +M ++G P + TY L
Sbjct: 487 SEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTL 546
Query: 356 LQGHLGKRGRKGPDPLVNFDTIFVGGLV 383
+ L K GR D ++ F+ + G+
Sbjct: 547 IDA-LCKLGRV-DDAVLQFNQMINEGVT 572
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 132/307 (42%), Gaps = 13/307 (4%)
Query: 60 FQYTQKAQPCFAHNSITFNRMV---DIIGKSRNID-LFWETLQEMGRRRLVNDKTFKIAL 115
Q+ Q N++ FN +V + K ++ LF E L + R +V T L
Sbjct: 561 LQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNL 620
Query: 116 MTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIK 174
V E +++++ M G + + N ++ C + EA K L +S +K
Sbjct: 621 CKEGRVMEARRLIDSMVCM---GLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLK 677
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
PN ++Y L+ GYC G + A ++ M +G P ++ + ++ F+ + EA ++
Sbjct: 678 PNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEAREL 737
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
+ M +K + TY I++D CK +A+ + + + ++ D +T + +I GL
Sbjct: 738 YVNM-IKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLF 796
Query: 295 ARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
GR +A + I P + Y + + L+ E +F M K G P H
Sbjct: 797 KGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSH 856
Query: 351 TYIMLLQ 357
L++
Sbjct: 857 MLNALIR 863
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 98/208 (47%), Gaps = 21/208 (10%)
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
TY IVI C+ G++ + + K G D++ ++ ++ GL R+ EA V+
Sbjct: 86 TYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLR- 144
Query: 310 EKPDISL------YHGLIKGLLRLRRAREATQVFREMI---KRGCEPTMHTYIMLLQGHL 360
+ P++ Y+ L+KGL RRA EA ++ M+ C P + +Y +++ G
Sbjct: 145 QMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFF 204
Query: 361 --GKRGRK-------GPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY 410
G+ + G P +V ++TI + GL KA + A ++++ +GV+ Y
Sbjct: 205 NEGQVDKAYSLFLEMGVSPDVVTYNTI-IDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTY 263
Query: 411 NKFLHYYSNEEGVVMFEEVGKKLREVGL 438
N + + V M E V +K+ + G+
Sbjct: 264 NTIIDGLCKAQEVDMAEGVFQKMVDKGV 291
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 140/290 (48%), Gaps = 7/290 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHI 133
+T+N +++ I K +D + L M N T I L ++
Sbjct: 279 VTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSD 338
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M GC S+ N ++ LC+++L+ A ++ K+ + PN ++Y L+ G+C
Sbjct: 339 MLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKK 398
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ A + +M G P I + ++ K K D A+++ + K + L TY
Sbjct: 399 MDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPV-LITYN 457
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
VID + K GK A +LEEM ++G++ D +T S+++ GL G++ EA K+ ++E
Sbjct: 458 TVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGL 517
Query: 311 --KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
KP Y+ ++ GL + ++ A M+++GC+PT TY +L++G
Sbjct: 518 SIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEG 567
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 161/358 (44%), Gaps = 22/358 (6%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIM 134
IT+N ++ KS ID E L+ M V T+ L +L + +LK+ +
Sbjct: 177 ITYNVLIGGYCKSGEIDKALEVLERMSVAPDV--VTYNTILRSLCDSGKLKEAMEVLDRQ 234
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDL 193
C + +++ C V +A L+ ++ + KP+ + Y LI G C G L
Sbjct: 235 LQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRL 294
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
EA K N M G +P++ + ++ + + +A ++ M +++ + T+ I
Sbjct: 295 DEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDM-LRKGCSPSVVTFNI 353
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK-- 311
+I+++C++ + +A +LE+M K G ++L+ + +++G ++ A + +E +
Sbjct: 354 LINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRG 413
Query: 312 --PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG----- 364
PDI Y+ L+ L + + A ++ ++ +GC P + TY ++ G L K G
Sbjct: 414 CYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDG-LTKVGKTEYA 472
Query: 365 --------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
RKG P + + + GL + GK +A K + ++ YN +
Sbjct: 473 VELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIM 530
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 131/283 (46%), Gaps = 24/283 (8%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+ I Y LI GYC G++ +A ++ M+ P + + ++ + K EAM+V
Sbjct: 174 PDVITYNVLIGGYCKSGEIDKALEVLERMS---VAPDVVTYNTILRSLCDSGKLKEAMEV 230
Query: 235 F--QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
Q+ R D + TY I+I+ C + QA +L+EM K+G + D +T + +I G
Sbjct: 231 LDRQLQRECYPDVI---TYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLING 287
Query: 293 LLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
+ GRL EA K + + KP++ ++ +++ + R +A ++ +M+++GC P+
Sbjct: 288 ICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPS 347
Query: 349 MHTYIMLLQGHLGKR--GRK----------GPDPLVNFDTIFVGGLVKAGKSLDAAKYVE 396
+ T+ +L+ KR GR G P + G + K A +Y+E
Sbjct: 348 VVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLE 407
Query: 397 RVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLA 439
+++RG YN L + V E+ +L G +
Sbjct: 408 IMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCS 450
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 102/221 (46%), Gaps = 3/221 (1%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHI 133
+TFN +++ + + R + + L++M + V N ++ L + +++ + + + I
Sbjct: 349 VTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEI 408
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGD 192
M GC + N ++ LC+ V A ++ +LS + P I Y +I G VG
Sbjct: 409 MVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGK 468
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
A ++ M +G +P I ++ + K DEA+K+F M + + TY
Sbjct: 469 TEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAV-TYN 527
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
++ +CK + S+A L M ++G + T + +I G+
Sbjct: 528 AIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGI 568
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 2/117 (1%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
IT+N ++D + K + E L+EM R+ L D T+ L L ++ + + FH
Sbjct: 454 ITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHD 513
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCD 189
M + S N ++ LC+ + A +L + + KP E Y LI+G D
Sbjct: 514 MEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGIAD 570
Score = 41.6 bits (96), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 71/160 (44%), Gaps = 17/160 (10%)
Query: 293 LLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
L+ G L E K +E + + PD+ LI+G R + ++AT++ + G P
Sbjct: 116 LVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPD 175
Query: 349 MHTYIMLLQGHLG-----------KRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVER 397
+ TY +L+ G+ +R PD +V ++TI L +GK +A + ++R
Sbjct: 176 VITYNVLIGGYCKSGEIDKALEVLERMSVAPD-VVTYNTIL-RSLCDSGKLKEAMEVLDR 233
Query: 398 VMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVG 437
+ R Y + N+ GV ++ ++R+ G
Sbjct: 234 QLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKG 273
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 159/345 (46%), Gaps = 30/345 (8%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALM-TLAEVRELKKMVNFFHIM 134
T N +VD + +SRN L + + M ++ AL+ A+ ++ + ++
Sbjct: 76 TCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIECFADAQKPQLGFGVVGLV 135
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDL 193
G ++ ++N V+K LC+ V EA LI ++ + + P+ ++Y LI G C L
Sbjct: 136 LKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKL 195
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
EA + M G P+ +++ K + DEAM++ + M+ K+ D + Y
Sbjct: 196 KEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMK-KKGFDADVVLYGT 254
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK-- 311
+I C G + + + +EM +GI A+ +T S +++GL G+ +EA V+ + +
Sbjct: 255 LISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHG 314
Query: 312 --PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPD 369
PD+ Y GLI GL + RA A + M+++G EP+ TY +LL
Sbjct: 315 IHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLS------------ 362
Query: 370 PLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
GL K G +DA K + ++ +G + YN +
Sbjct: 363 -----------GLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLM 396
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 174/406 (42%), Gaps = 78/406 (19%)
Query: 60 FQYTQKAQPCFAHNSITFNR-------MVDII--GKSRNIDLF--WETLQEMGRRRLVND 108
F QK Q F + R +++I+ G RN +F ++EMGR+ + D
Sbjct: 119 FADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPD 178
Query: 109 -KTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLIL 167
++ + L + ++LK+ V M GC + ++ LC+ + EA L+
Sbjct: 179 IVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLE 238
Query: 168 K------------------------------------LSEWIKPNEIAYGWLIKGYCDVG 191
L + I N + Y L+ G C +G
Sbjct: 239 AMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLG 298
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTY 251
EA+ + N M + G P + +I+ K + AM + +M V++ ++ TY
Sbjct: 299 QWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLM-VEKGEEPSNVTY 357
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV----- 306
+++ +CK G + A+ +L M ++G +AD +T ++++ GL +G++ EA K+
Sbjct: 358 NVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFD 417
Query: 307 -EEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
E +P++ ++ LI GL + R +A ++ R+M+K+G + TY MLL
Sbjct: 418 NENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLL--------- 468
Query: 366 KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
GG +KAGK +A + ++V++ G F Y+
Sbjct: 469 --------------GGCLKAGKIKEAMELWKQVLDLGFVPNSFTYS 500
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 145/314 (46%), Gaps = 24/314 (7%)
Query: 128 VNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKG 186
++ ++M + G E S N ++ LC+ LV++A K L + + + K + + Y L+KG
Sbjct: 339 MDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKG 398
Query: 187 YCDVGDLIEASKIWNLMTDE--GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD 244
CD G + EA K++N M D EP++ + +I K + +A+K+ + M VK+
Sbjct: 399 LCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKM-VKKGS 457
Query: 245 DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK 304
L TY +++ K GKI +A + +++ G ++ T S +I G L A
Sbjct: 458 CGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKG 517
Query: 305 VVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL 360
+ E+ P + Y+ L+ L + +A +F+EM CEP + ++ ++ G L
Sbjct: 518 LFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTL 577
Query: 361 G------------KRGRKG--PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
K G PD L F T+ + L K G+ +A +ER++ G
Sbjct: 578 KAGDFQFVKELQMKMVEMGLRPDALT-FSTL-INRLSKLGELDEAKSALERMVASGFTPD 635
Query: 407 RFDYNKFLHYYSNE 420
Y+ L S++
Sbjct: 636 ALVYDSLLKGLSSK 649
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 131/295 (44%), Gaps = 11/295 (3%)
Query: 73 NSITFNRMVDIIGK-SRNIDLF--WETLQEMGRRR-LVNDKTFKIALMTLAEVRELKKMV 128
+++T+N ++ + K ID F + E G++ +V T L +V E K+
Sbjct: 353 SNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLF 412
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGY 187
N +C E ++ N ++ LC+ + +A + K+ + N + Y L+ G
Sbjct: 413 NSMFDNENC-LEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGC 471
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
G + EA ++W + D GF P+ +I+ F K+ + A +F MR ++
Sbjct: 472 LKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNP-A 530
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA----Y 303
L Y ++ +CK G + QA ++ +EM E D ++ +++I G L G +
Sbjct: 531 LFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQM 590
Query: 304 KVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
K+VE +PD + LI L +L EA M+ G P Y LL+G
Sbjct: 591 KMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKG 645
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 72/175 (41%), Gaps = 4/175 (2%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTF--KIALMTLAEVRELKKM 127
F NS T++ ++D K R +++ EM R +N F + +L + L++
Sbjct: 492 FVPNSFTYSILIDGFCKMRMLNIAKGLFCEM-RTHGLNPALFDYNTLMASLCKEGSLEQA 550
Query: 128 VNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKG 186
+ F M + CE + N ++ + K L +K+ E ++P+ + + LI
Sbjct: 551 KSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINR 610
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK 241
+G+L EA M GF P V D +++ E + + M K
Sbjct: 611 LSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAK 665
>gi|51971677|dbj|BAD44503.1| hypothetical protein [Arabidopsis thaliana]
Length = 447
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 165/372 (44%), Gaps = 22/372 (5%)
Query: 36 NLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWE 95
NL + ++ N+ P + + FF + + H++ +F+ +DI + W
Sbjct: 51 NLVNSVLKRLWNHGPKALQ----FFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWS 106
Query: 96 TLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLC 154
+ M R+ + KTF I A + K V F M++ GC L N ++ LC
Sbjct: 107 LIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLC 166
Query: 155 QRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDV 214
+ K V +A L L + + Y ++ G+C + + ++ M + G P++
Sbjct: 167 KSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKTLEVLKEMVERGINPNLTT 226
Query: 215 VDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEM 274
+ M++ FF+ + A + F M+ KR ++ + TY V+ G+I +A + +EM
Sbjct: 227 YNTMLKGFFRAGQIRHAWEFFLEMK-KRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEM 285
Query: 275 FKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRA 330
+ G+ T +++I L + + A + EE+ + P+++ Y+ LI+GL
Sbjct: 286 IREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEF 345
Query: 331 REATQVFREMIKRGCEPTMHTYIMLLQGH---------LGKRGRKGP-DPLVNFDT--IF 378
++ + M GCEP TY M+++ + LG + G D L N DT I
Sbjct: 346 SRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNIL 405
Query: 379 VGGLVKAGKSLD 390
+ G+ +S D
Sbjct: 406 ISGMFVRKRSED 417
>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Glycine max]
Length = 693
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 169/361 (46%), Gaps = 38/361 (10%)
Query: 105 LVNDKTFKIA-------LMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRK 157
L+++K F+ A + + AE+ +K+ + M++ G S + LN VVK + +
Sbjct: 122 LISNKNFEKAHEVMQCMVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMG 181
Query: 158 LVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVD 216
LV A+ L ++ + ++PN ++Y ++ GYC +G+++E+ + M + GF +
Sbjct: 182 LVEYAENLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLS 241
Query: 217 KMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLE 272
++ F + A+ F +R ++GL + +I+ +CKRG + QA+ MLE
Sbjct: 242 LIVREFCEKGFVTRALWYF-----RRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLE 296
Query: 273 EMFKRGIEADNLTLSSIIYGLLARGRLREAYK-----VVEEIEKPDISLYHGLIKGLLRL 327
EM RG + + T +++I GL +G +A++ V E KP++ Y +I G R
Sbjct: 297 EMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRD 356
Query: 328 RRAREATQVFREMIKRGCEPTMHTYIMLLQGH------------LGKRGRKGPDPLVNFD 375
+ A + M ++G P +TY L+ GH + +G P V
Sbjct: 357 EKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTY 416
Query: 376 TIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE----EGVVMFEEVGK 431
V GL K G+ +A K ++ G++ + Y + + + + +V+F ++ K
Sbjct: 417 NAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVK 476
Query: 432 K 432
Sbjct: 477 S 477
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 150/336 (44%), Gaps = 29/336 (8%)
Query: 102 RRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVE 161
R +V++ T + + E + + + +F + G +L +++ LC+R V +
Sbjct: 231 RGFVVDNATLSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQ 290
Query: 162 AKYLILKL--SEWIKPNEIAYGWLIKGYCDVGDLIEASKIW-NLMTDEGFEPSIDVVDKM 218
A ++ ++ W KPN + LI G C G +A +++ L+ E +P++ M
Sbjct: 291 AFEMLEEMVGRGW-KPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAM 349
Query: 219 IETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEM 274
I + + DE M +M+ + RM + GL+ TY +ID CK G +AY ++ M
Sbjct: 350 ISGYCR----DEKMNRAEML-LSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVM 404
Query: 275 FKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRA 330
+ G + T ++I+ GL +GR++EAYKV++ + D Y LI +
Sbjct: 405 NEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEI 464
Query: 331 REATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK------------GPDPLVNFDTIF 378
++A +F +M+K G +P +H+Y L+ ++ K G P T
Sbjct: 465 KQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSM 524
Query: 379 VGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
+ G + G A K+ R+ + G Y +
Sbjct: 525 ICGYCREGNLRLALKFFHRMSDHGCASDSITYGALI 560
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 100/237 (42%), Gaps = 13/237 (5%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
N +T+ M+ + ++ L M + L N T+ + + ++
Sbjct: 342 NVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELM 401
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK--LSEWIKPNEIAYGWLIKGYCD 189
++MN+ G ++ N +V LC++ V EA Y +LK + +++ Y LI +C
Sbjct: 402 NVMNEEGFSPNVCTYNAIVDGLCKKGRVQEA-YKVLKSGFRNGLDADKVTYTILISEHCK 460
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL- 248
++ +A ++N M G +P I +I F + + E+ F+ GL
Sbjct: 461 QAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFE-----EAVRFGLV 515
Query: 249 ---STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
TY +I C+ G + A M G +D++T ++I GL + +L EA
Sbjct: 516 PTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEA 572
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 93/210 (44%), Gaps = 3/210 (1%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMV 128
F+ N T+N +VD + K + ++ L+ R L DK T+ I + + E+K+ +
Sbjct: 409 FSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQAL 468
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGY 187
F+ M G + + ++ C+ K + E++ + + + P Y +I GY
Sbjct: 469 VLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGY 528
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C G+L A K ++ M+D G +I K +K DEA ++ M K +
Sbjct: 529 CREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDAMIEKGLTPCE 588
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKR 277
++ + ++ CK A +LE + K+
Sbjct: 589 VTRVTLAYEY-CKIDDGCSAMVVLERLEKK 617
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 138/290 (47%), Gaps = 7/290 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHI 133
+T+N +V+ I + +D E L+ + N ++ I L L +
Sbjct: 103 VTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGE 162
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGD 192
M GC ++ N ++ LC++ LV A ++ ++ ++ PN ++Y L+ +C
Sbjct: 163 MGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKK 222
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ +A +LM G P I + ++ + + D A+++ ++ K + L +Y
Sbjct: 223 MDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPV-LISYN 281
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
VID + K GK +A +L EM +G++ D +T S+I GL R+ +A + +++
Sbjct: 282 TVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDM 341
Query: 311 --KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+P+ LY+ +I GL + R A +F MI GC P TY +L++G
Sbjct: 342 GIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEG 391
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 114/249 (45%), Gaps = 33/249 (13%)
Query: 178 IAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-Q 236
+AY ++ GYC G L A + L+ + EP + +I + A+ V +
Sbjct: 1 MAYNAMVAGYCGAGQLDAARR---LVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDE 57
Query: 237 MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR 296
M+R + + D+ TY I+++ CKR QA +L+EM +G D +T + ++ G+
Sbjct: 58 MLRRRCVPDV--VTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQE 115
Query: 297 GRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
GR+ +A + ++ + +P+ Y+ ++KGL R +A ++ EM ++GC P + T+
Sbjct: 116 GRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTF 175
Query: 353 IMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNK 412
ML+ L ++G P A + +E++ G YN
Sbjct: 176 NMLIS-FLCRKGLVEP----------------------ALEVLEQIPKYGCTPNSLSYNP 212
Query: 413 FLHYYSNEE 421
LH + ++
Sbjct: 213 LLHAFCKQK 221
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 138/328 (42%), Gaps = 58/328 (17%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDE 206
N +V C + A+ L+ ++ ++P+ Y LI+G C G A + + M
Sbjct: 4 NAMVAGYCGAGQLDAARRLVAEMP--VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRR 61
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQ 266
P + ++E K + +AMK+ MR K + TY +V++ +C+ G++
Sbjct: 62 RCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTP-DIVTYNVVVNGICQEGRVDD 120
Query: 267 AYTMLE-----------------------------------EMFKRGIEADNLTLSSIIY 291
A L+ EM ++G + +T + +I
Sbjct: 121 AIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLIS 180
Query: 292 GLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
L +G + A +V+E+I K P+ Y+ L+ + ++ +A M+ RGC P
Sbjct: 181 FLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYP 240
Query: 348 TMHTYIMLLQGHLGKRGR-------------KGPDP-LVNFDTIFVGGLVKAGKSLDAAK 393
+ +Y LL L + G KG P L++++T+ + GL KAGK+ +A +
Sbjct: 241 DIVSYNTLLTA-LCRSGEVDVAVELLHQLKDKGCAPVLISYNTV-IDGLTKAGKTKEALE 298
Query: 394 YVERVMNRGVEVPRFDYNKFLHYYSNEE 421
+ ++++G++ Y+ E+
Sbjct: 299 LLNEMVSKGLQPDIITYSTIAAGLCRED 326
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 92/210 (43%), Gaps = 3/210 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFF 131
NS+++N ++ K + +D L M R D ++ L L E+ V
Sbjct: 206 NSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELL 265
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
H + D GC L N V+ L + EA L+ ++ S+ ++P+ I Y + G C
Sbjct: 266 HQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCRE 325
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
+ +A + + + D G P+ + + +I K + A+ +F M + ST
Sbjct: 326 DRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYM-IGNGCMPNEST 384
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIE 280
Y I+I+ + G I +A +L+E+ R E
Sbjct: 385 YTILIEGLAYEGLIKEARDLLDELCSRAGE 414
>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 173/376 (46%), Gaps = 41/376 (10%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVN 129
A ++ + N ++ +G+ R+I E L EM +R++ + TF I + L + R + + +
Sbjct: 278 AVDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQ 337
Query: 130 FFHIM------NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI--LKLSEWIKPNEIAYG 181
F + N G E + + N ++ LC+ + L+ +K+ +PN + Y
Sbjct: 338 VFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYN 397
Query: 182 WLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK 241
LI G+ G+ A +++ M +EG +P++ ++ +++ K + A++ F M+ K
Sbjct: 398 CLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGK 457
Query: 242 RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
+ +TY +I C I++A EEM G D + S+I GL GR+ +
Sbjct: 458 GLKG-NAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMND 516
Query: 302 AYKVVEEIEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
A VV +++ SL Y+ LI G + ++ ++ EM + G +P TY L+
Sbjct: 517 ASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLIS 576
Query: 358 GHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
+LGK G +F T A+K +E+++ G+ Y +H Y
Sbjct: 577 -YLGKTG--------DFAT--------------ASKVMEKMIKEGLRPSVVTYGAIIHAY 613
Query: 418 SN----EEGVVMFEEV 429
+ +EG+ +F E+
Sbjct: 614 CSKKNVDEGMKIFGEM 629
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 132/295 (44%), Gaps = 36/295 (12%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEG------FEPSIDVVDKMIETFFKIN 226
I+P+ + +G L+ C + EA ++++ + +G EP + + + +I+ K+
Sbjct: 312 IRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVG 371
Query: 227 KDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTL 286
K+++ + + + M++ ++ TY +ID K G +A+ + +M + G++ + +TL
Sbjct: 372 KEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITL 431
Query: 287 SSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIK 342
++++ GL GR+ A + E++ K + + Y LI + A Q F EM+
Sbjct: 432 NTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLS 491
Query: 343 RGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKY-------- 394
GC P Y L+ G L GR +N ++ V L AG SLD + Y
Sbjct: 492 SGCSPDAVVYYSLISG-LCIAGR------MNDASVVVSKLKLAGFSLDRSCYNVLISGFC 544
Query: 395 ----VERVM-------NRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
+ERV GV+ YN + Y +V +K+ + GL
Sbjct: 545 KKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGL 599
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 124/321 (38%), Gaps = 61/321 (19%)
Query: 34 NFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLF 93
NF+ HE F Q+ + QP N IT N +VD + K +
Sbjct: 408 NFDRAHELFRQM----------------NEEGVQP----NVITLNTLVDGLCKHGRVHRA 447
Query: 94 WETLQEM-GRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCE------YSL--- 143
E EM G+ N T+ + V + + + F M GC YSL
Sbjct: 448 VEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISG 507
Query: 144 --------------------------EMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPN 176
N ++ C++K + L+ ++ E +KP+
Sbjct: 508 LCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPD 567
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
I Y LI GD ASK+ M EG PS+ +I + DE MK+F
Sbjct: 568 TITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFG 627
Query: 237 MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR 296
M Y I+ID +C+ + +A +++E+M + + + T ++I+ G+ +
Sbjct: 628 EMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDK 687
Query: 297 GRLREAY----KVVEEIEKPD 313
L +A+ ++VEE +PD
Sbjct: 688 KMLHKAFELMDRMVEEACRPD 708
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 163/362 (45%), Gaps = 20/362 (5%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHI 133
+ F +++ ++ + DL Q+M R+++ D +F I + +L ++ F
Sbjct: 80 VDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGK 139
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWI-KPNEIAYGWLIKGYCDVGD 192
+ G + N ++ LC V EA L ++ E +PN + + L+ G C G
Sbjct: 140 LTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGR 199
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
++EA + + M ++G +P+ +++ K A+ + + M + Y
Sbjct: 200 IVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYS 259
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK- 311
+ID +CK G+ S A + EM ++GI D T +S+I G + GR +A ++++E+ +
Sbjct: 260 AIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER 319
Query: 312 ---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR----- 363
PD+ Y+ LI ++ + EA +++ EM+ RG P TY ++ G +
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAA 379
Query: 364 -------GRKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
KG P L+ F+T+ + G A + D + + + G+ YN +H
Sbjct: 380 EHMFYLMATKGCSPNLITFNTL-IDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIH 438
Query: 416 YY 417
+
Sbjct: 439 GF 440
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 137/300 (45%), Gaps = 16/300 (5%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHI 133
+T+N +++ K E EM R ++ N T+ + + L + F++
Sbjct: 326 VTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYL 385
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M GC +L N ++ C K + + L+ +++E + + Y LI G+ VGD
Sbjct: 386 MATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGD 445
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD-------- 244
L A + M G P I D +++ K +A+++F++M+ + D
Sbjct: 446 LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFN 505
Query: 245 --DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
+ + TY I+I + GK +A + EEM RGI D +T SS+I GL + RL EA
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 303 YKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
++ + + P++ + LI G + R + ++F EM +RG TYI L+ G
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICG 625
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 140/332 (42%), Gaps = 24/332 (7%)
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGY 187
N F M + G L N ++ C +A+ L+ ++ E I P+ + Y LI +
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAF 335
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
G EA ++++ M G P+ MI+ F K N+ D A +F +M K
Sbjct: 336 VKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP-N 394
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
L T+ +ID C +I +L EM + G+ AD T +++I+G G L A +++
Sbjct: 395 LITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQ 454
Query: 308 EIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE-PTMHTYIMLLQGHLGK 362
E+ PDI L+ GL + ++A ++F+ M K + H +
Sbjct: 455 EMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPF---------- 504
Query: 363 RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE-- 420
G +P V I + GL+ GK L+A + E + +RG+ Y+ + +
Sbjct: 505 ---NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561
Query: 421 --EGVVMFEEVGKKLREVGLADLADIFQRYGK 450
E MF+ +G K + + Y K
Sbjct: 562 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCK 593
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 108/235 (45%), Gaps = 18/235 (7%)
Query: 147 NKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
+ ++ C++ + A+++ L ++ PN I + LI GYC + + ++ + MT+
Sbjct: 364 SSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTE 423
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKIS 265
G + +I F+ + + A+ + Q M + + T ++D +C GK+
Sbjct: 424 TGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCP-DIVTCDTLLDGLCDNGKLK 482
Query: 266 QAYTMLEEMFK-----------RGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK--- 311
A M + M K G+E D T + +I GL+ G+ EA ++ EE+
Sbjct: 483 DALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542
Query: 312 -PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
PD Y +I GL + R EATQ+F M + P + T+ L+ G+ K GR
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYC-KAGR 596
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 125/296 (42%), Gaps = 19/296 (6%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKT-FKIALMTLAE 120
Y + C + N ITFN ++D ++ ID E L EM LV D T + +
Sbjct: 384 YLMATKGC-SPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYL 442
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA--KYLILKLSE------- 171
V +L ++ M G + + ++ LC + +A + +++ S+
Sbjct: 443 VGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASH 502
Query: 172 ---WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++P+ Y LI G + G +EA +++ M G P MI+ K ++
Sbjct: 503 PFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 562
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
DEA ++F M K + T+ +I+ CK G++ + EM +RGI A+ +T +
Sbjct: 563 DEATQMFDSMGSKSFSP-NVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYIT 621
Query: 289 IIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREM 340
+I G G + A + +E+ PD ++ GL + A + ++
Sbjct: 622 LICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 153/303 (50%), Gaps = 22/303 (7%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+ +N ++D + K + ++ ++ EM R + D T+ + +L + F +
Sbjct: 273 VMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQL---MGAFSL 329
Query: 134 MNDCGCEYSLEMLNKVVKT-------LCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIK 185
+N E +L+ +N V T LC+ + EAK L+ ++ E +KPN + Y L+
Sbjct: 330 LN----EMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMD 385
Query: 186 GYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD 245
GYC VG++ A +I++ M PS+ + MI K DEAM + + M K +
Sbjct: 386 GYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVP 445
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA--- 302
TY +ID +CK G+I+ A +++E+ RG AD +T +S++ GL L +A
Sbjct: 446 -NTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIAL 504
Query: 303 -YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG 361
K+ E +P+ Y LI GL + R + A ++F+ ++ +GC ++TY +++ G L
Sbjct: 505 FMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGG-LC 563
Query: 362 KRG 364
K G
Sbjct: 564 KEG 566
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 148/346 (42%), Gaps = 64/346 (18%)
Query: 106 VNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYL 165
+N ++ L L ++ E + + ++ D + M N ++ LC+ KLV EA
Sbjct: 235 MNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDF 294
Query: 166 ILKL-SEWIKPNEIAYGWLIKGYCDVGDLI------------------------------ 194
++ S I P+ I Y LI G+C G L+
Sbjct: 295 YTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCK 354
Query: 195 -----EASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
EA + +MT EG +P++ +++ + + + A ++F M V+ + +
Sbjct: 355 EGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAM-VQTEVNPSVC 413
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
+Y I+I+ +CK + +A +L EM + + + +T +S+I GL GR+ A +++E+
Sbjct: 414 SYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKEL 473
Query: 310 ----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
+ D+ Y L+ GL + + +A +F +M +RG +P +TY
Sbjct: 474 HHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTY------------- 520
Query: 366 KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
T + GL K + +A K + ++ +G + + YN
Sbjct: 521 ----------TALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYN 556
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 175/400 (43%), Gaps = 53/400 (13%)
Query: 60 FQYTQKAQPCFAHNSI-----TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTF--K 112
F + +QP H+ + FN M+ + RN E + +G LV K F
Sbjct: 98 FPFYFHSQPPSIHDVVHDAVSQFNGMLLM----RNTPSIIEFGKILGS--LVKMKHFPTA 151
Query: 113 IALMTLAEVRELKKMVNFFHIMNDCGCE-----YSLEMLNKVVKTLCQRKLVVEA---KY 164
I+L EV+ ++ + I+ +C C +S +L K++K Q ++ K
Sbjct: 152 ISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKG 211
Query: 165 LILK-------------LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPS 211
L LK +++ + N+++YG L+ G C +G+ A K+ ++ D P
Sbjct: 212 LCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPD 271
Query: 212 IDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTML 271
+ + + +I+ K +EA + M + + + TY +I C G++ A+++L
Sbjct: 272 VVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFP-DVITYSTLICGFCLAGQLMGAFSLL 330
Query: 272 EEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV----EEIEKPDISLYHGLIKGLLRL 327
EM + I D T + +I L G+L+EA ++ +E KP++ Y L+ G +
Sbjct: 331 NEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLV 390
Query: 328 RRAREATQVFREMIKRGCEPTMHTYIMLLQGHL-GKRGRKGPDPL------------VNF 374
A Q+F M++ P++ +Y +++ G GK + + L V +
Sbjct: 391 GEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTY 450
Query: 375 DTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
+++ + GL K+G+ A ++ + +RG Y L
Sbjct: 451 NSL-IDGLCKSGRITSALDLMKELHHRGQPADVITYTSLL 489
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 112/263 (42%), Gaps = 25/263 (9%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+ I +G ++ + A + M +G EP + + +I F + +
Sbjct: 130 PSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQ-----MA 184
Query: 235 FQMMRVKRMDDLGLSTYRIVID----WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
F + ++ LG I++ +C +G++ ++ +++ +G + + ++ +++
Sbjct: 185 FSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLL 244
Query: 291 YGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
GL G R A K++ IE +PD+ +Y+ +I GL + + EA + EM RG
Sbjct: 245 NGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIF 304
Query: 347 PTMHTYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKY 394
P + TY L+ G L + K +P V TI + L K GK +A
Sbjct: 305 PDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNL 364
Query: 395 VERVMNRGVEVPRFDYNKFLHYY 417
+ + GV+ Y+ + Y
Sbjct: 365 LGVMTKEGVKPNVVTYSTLMDGY 387
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 84/184 (45%), Gaps = 12/184 (6%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLSEWIKPNE-IAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N ++ LC+ + A L+ +L +P + I Y L+ G C +L +A ++ M +
Sbjct: 451 NSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKE 510
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKIS 265
G +P+ +I+ K + A K+FQ + VK + + TY ++I +CK G +
Sbjct: 511 RGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCC-IDVYTYNVMIGGLCKEGMLD 569
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISLYHGLIKGLL 325
+A M +M G D +T II L + +A K++ E+ + KGLL
Sbjct: 570 EALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEM----------IAKGLL 619
Query: 326 RLRR 329
R
Sbjct: 620 HFRN 623
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 172/400 (43%), Gaps = 49/400 (12%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMG-RRRLVNDK-TFKIALMTLAEVRELKKMVNF 130
N +TFN ++D + KS ++ +M + LV DK T+ + L +
Sbjct: 464 NVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEAL 523
Query: 131 FHIMND-------CGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWL 183
M D C C L L V R L V + L L+L P+++ + L
Sbjct: 524 LDAMPDPDTYAFNC-CINGLSKLGDV-----SRALQVYNRMLELELV----PDKVTFNIL 573
Query: 184 IKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM 243
I G C G+ +AS ++ M + +P + +I+ K + + A + +M
Sbjct: 574 IAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLM----- 628
Query: 244 DDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
+LG+ TY ++ +CK G+I +A LEEM G D++T S++Y L R
Sbjct: 629 GNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRT 688
Query: 300 REAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
+A ++V E++ PD Y+ L+ GL + + +A V EM+ +G P + TY L
Sbjct: 689 DDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTL 748
Query: 356 ---------------LQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMN 400
L G + R + P V ++ + GL K G+ +A + ++ +M
Sbjct: 749 IDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMR 808
Query: 401 RGVEV-PR-FDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
+ +V P YN FL + + E+ + LR+ L
Sbjct: 809 KSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSL 848
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 158/355 (44%), Gaps = 32/355 (9%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHI 133
+T+N ++D + K+ +++ +M R V N T+ + + L +V + +
Sbjct: 252 VTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQE 311
Query: 134 MNDCGCEYSLEML--NKVVKTLCQRKLVVEAKYLILKLSEW---IKPNEIAYGWLIKGYC 188
M C+ ++ N + LC++ + EA L+ L + + P+ + + LI G C
Sbjct: 312 MTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLC 371
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
G + EA +++ M G+ P++ + ++ K +K + A + + M V + +
Sbjct: 372 KCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESM-VDKGVTPDV 430
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY +++D CK ++ +A +L M RG + +T +SII GL R EA+++ ++
Sbjct: 431 ITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDD 490
Query: 309 IE-----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG--HLG 361
+ PD Y LI GL R RA +A + M +P + + + G LG
Sbjct: 491 MALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMP----DPDTYAFNCCINGLSKLG 546
Query: 362 KRGRK------------GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVE 404
R PD V F+ I + G KAG A+ E ++ + ++
Sbjct: 547 DVSRALQVYNRMLELELVPDK-VTFN-ILIAGACKAGNFEQASALFEEMVAKNLQ 599
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 97/426 (22%), Positives = 173/426 (40%), Gaps = 70/426 (16%)
Query: 23 ESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVD 82
+ RLH S+++ Q+ N L + F+ + A P F H +FN+ ++
Sbjct: 72 KGRLHPSVAA-------AILAQLDGNAELGTQ----FYDWA-AALPGFKHTIFSFNKYLN 119
Query: 83 IIGKS----RNIDLFWETLQEMGRRRLVNDKT---------------------------- 110
++ KS + IDLF L R T
Sbjct: 120 LLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVERTLGFFRRIRSSSRS 179
Query: 111 ---FKIALMTLAEVRELKKMVNFFHI-MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
+ I L +L E + + F M G ++ N ++ LC+ + L
Sbjct: 180 VADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELF 239
Query: 167 LKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI 225
+L E P+ + Y LI C GDL EA ++ M+ P++ +I K+
Sbjct: 240 EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKV 299
Query: 226 NKDDEAMKVFQMMRVKRMDDL-GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRG--IEAD 282
+ DEA ++ Q M K D L + TY +D +CK+ ++A ++ + + D
Sbjct: 300 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 359
Query: 283 NLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFR 338
+T S++I GL G++ EA V +++ P++ Y+ L+ GL + + A +
Sbjct: 360 TVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIE 419
Query: 339 EMIKRGCEPTMHTYIMLLQGH------------LGKRGRKGPDP-LVNFDTIFVGGLVKA 385
M+ +G P + TY +L+ L +G P +V F++I + GL K+
Sbjct: 420 SMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSI-IDGLCKS 478
Query: 386 GKSLDA 391
+S +A
Sbjct: 479 DRSGEA 484
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 157/355 (44%), Gaps = 32/355 (9%)
Query: 75 ITFNRMVDIIGKSRNID----LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNF 130
+T+N ++D + K+ +++ L + + R + N T+ + + L +V + +
Sbjct: 743 VTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEAREL 802
Query: 131 FHIMNDCGCEYSLEML--NKVVKTLCQRKLVVEAKYLILKLSEW---IKPNEIAYGWLIK 185
M C+ ++ N + LC++ ++ EA L+ L + + P+ + + LI
Sbjct: 803 IQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLID 862
Query: 186 GYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD 245
G C G EA +++ M G+ P++ + ++ K +K + A + + M V +
Sbjct: 863 GLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESM-VDKGVT 921
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
+ TY +++D CK + +A +L M RG + +T +SII GL + EA+++
Sbjct: 922 PDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQM 981
Query: 306 VEEIE-----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG-- 358
+++ PD Y LI GL R A +A + M +P + + + G
Sbjct: 982 FDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMP----DPDTYAFNCCINGLS 1037
Query: 359 HLGKRGRK---------GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVE 404
LG R PD V F+ I + G KAG A+ E ++ + ++
Sbjct: 1038 KLGDVSRALHRMLELELVPDK-VTFN-ILIAGACKAGNFEQASALFEEMVAKNLQ 1090
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 146/347 (42%), Gaps = 41/347 (11%)
Query: 58 LFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRR---LVNDKTFKIA 114
L + + C N +T++ +++ + K ID E +QEM R+ L N T+
Sbjct: 764 LHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSF 823
Query: 115 LMTLAEVRELKKMVNFFHIMNDCGCEYSLEML--NKVVKTLCQRKLVVEAKYLILKL-SE 171
L L + + + + D S + + + ++ LC+ EA + + +
Sbjct: 824 LDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAG 883
Query: 172 WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEA 231
PN + Y L+ G C + A + M D+G P + +++ F K + DEA
Sbjct: 884 GYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEA 943
Query: 232 MKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEM-FKRGIEADNLTLSSII 290
+++ M R + T+ +ID +CK + +A+ M ++M K G+ D +T ++I
Sbjct: 944 LELLHGM-ASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLI 1002
Query: 291 YGLLARGRLREAYKVVEEIEKPDISLYHGLIKGLLRL---RRA----------------- 330
GL G +A +++ + PD ++ I GL +L RA
Sbjct: 1003 DGLFRTGWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRALHRMLELELVPDKVTFN 1062
Query: 331 ------------REATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
+A+ +F EM+ + +P + T+ L+ G L K G+
Sbjct: 1063 ILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDG-LCKAGQ 1108
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 107/240 (44%), Gaps = 11/240 (4%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMV 128
+ N +T+N +++ + K+ ++ ++ M + + D T+ + + + + + +
Sbjct: 885 YVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEAL 944
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI--LKLSEWIKPNEIAYGWLIKG 186
H M GC ++ N ++ LC+ EA + + L + P++I Y LI G
Sbjct: 945 ELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDG 1004
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
G +A + + M D P + I K+ D + + +M+ ++ + D
Sbjct: 1005 LFRTGWAGQAEVLLDAMPD----PDTYAFNCCINGLSKLG--DVSRALHRMLELELVPDK 1058
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
T+ I+I CK G QA + EEM + ++ D +T ++I GL G++ + ++
Sbjct: 1059 --VTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEATWDIM 1116
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 146/327 (44%), Gaps = 22/327 (6%)
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCD 189
F + G +++ N V+ +CQ + EA +L+L + + P+ I+Y ++ GYC
Sbjct: 234 FREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR 293
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGL 248
G+L + K+ +M +G +P+ + +I +I K EA + F +M+R + D
Sbjct: 294 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPD--T 351
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
Y +ID CKRG I A EM R I D LT ++II G G + EA K+ E
Sbjct: 352 VVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE 411
Query: 309 I----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
+ +PD + LI G + ++A +V MI+ GC P + TY L+ G L K G
Sbjct: 412 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDG-LCKEG 470
Query: 365 -------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
+ G P + V GL K+G +A K V G+ Y
Sbjct: 471 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 530
Query: 412 KFLHYYSNEEGVVMFEEVGKKLREVGL 438
+ Y + +E+ K++ GL
Sbjct: 531 TLMDAYCKSGEMDKAQEILKEMLGKGL 557
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 143/295 (48%), Gaps = 7/295 (2%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMV 128
+ + I+++ +V+ + +D W+ ++ M R+ L N + + L + +L +
Sbjct: 277 YTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 336
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGY 187
F M G + ++ C+R + A ++ S I P+ + Y +I G+
Sbjct: 337 EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 396
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C +GD++EA K+++ M +G EP ++I + K +A +V M ++
Sbjct: 397 CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM-IQAGCSPN 455
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
+ TY +ID +CK G + A +L EM+K G++ + T +SI+ GL G + EA K+V
Sbjct: 456 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 515
Query: 308 EIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
E E D Y L+ + +A ++ +EM+ +G +PT+ T+ +L+ G
Sbjct: 516 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 161/362 (44%), Gaps = 29/362 (8%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
+++ + ++D K +I + EM R + D T+ + ++ ++ + F
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDV 190
H M G E +++ C+ + +A + + PN + Y LI G C
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS- 249
GDL A+++ + M G +P+I + ++ K +EA+K+ V + GL+
Sbjct: 470 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL-----VGEFEAAGLNA 524
Query: 250 ---TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
TY ++D CK G++ +A +L+EM +G++ +T + ++ G G L + K++
Sbjct: 525 DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 584
Query: 307 EEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
+ P+ + ++ L+K + AT ++++M RG P TY L++GH
Sbjct: 585 NWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKA 644
Query: 363 RGR------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPR--F 408
R KG V+ ++ + G +K K L+A + +++ G+ + F
Sbjct: 645 RNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Query: 409 DY 410
D+
Sbjct: 705 DF 706
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 117/251 (46%), Gaps = 28/251 (11%)
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFK-INKDDEAMKVFQMMRVKRMDDLG 247
D G L EA +++ M + G S+D + + K K A+ VF + ++G
Sbjct: 187 DFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVF-----REFPEVG 241
Query: 248 L----STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
+ ++Y IVI ++C+ G+I +A+ +L M +G D ++ S+++ G G L + +
Sbjct: 242 VCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVW 301
Query: 304 KVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
K++E ++ KP+ +Y +I L R+ + EA + F EMI++G P Y L+ G
Sbjct: 302 KLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG- 360
Query: 360 LGKRG-------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
KRG + P V T + G + G ++A K + +G+E
Sbjct: 361 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD 420
Query: 407 RFDYNKFLHYY 417
+ + ++ Y
Sbjct: 421 SVTFTELINGY 431
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/276 (19%), Positives = 121/276 (43%), Gaps = 3/276 (1%)
Query: 42 FLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMG 101
F ++ N + + F + Q + N +T+ ++D + K ++D E L EM
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483
Query: 102 RRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVV 160
+ L N T+ + L + +++ V G ++ C+ +
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 543
Query: 161 EAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMI 219
+A+ ++ + L + ++P + + L+ G+C G L + K+ N M +G P+ + ++
Sbjct: 544 KAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Query: 220 ETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGI 279
+ + N A +++ M + + G TY ++ CK + +A+ + +EM +G
Sbjct: 604 KQYCIRNNLKAATAIYKDMCSRGVGPDG-KTYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Query: 280 EADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDIS 315
T S +I G L R + EA +V +++ + ++
Sbjct: 663 SVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLA 698
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 144/289 (49%), Gaps = 7/289 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
N ITFN ++D + N+ + +EM R+ L N T+ + L +L + +
Sbjct: 298 NEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQ 357
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
M+ G + ++ N ++ C++K++ EA+ ++ + + + PN I + LI Y
Sbjct: 358 DKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKA 417
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G + +A + ++M D G P++ + +I F + EA K+ + M + L T
Sbjct: 418 GRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLK-ADLVT 476
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y I++D +CK+G+ +A +L+EMF+ G+ +LT +++I G G A V +E
Sbjct: 477 YNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLME 536
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
K +I Y+ LIKG + EA ++ EM+++G P TY +L
Sbjct: 537 KKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDIL 585
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 166/361 (45%), Gaps = 38/361 (10%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMV 128
F ++++ N M+ + K I + +EM RRR+ VN TF + + L +V + +K
Sbjct: 190 FRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAG 249
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGY 187
+ M G S+ N ++ C+ + +A L+ ++ ++ I PNEI + LI G+
Sbjct: 250 DVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGF 309
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C ++ A K++ M +G +P++ + +I K DEA+ + +M +G
Sbjct: 310 CRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGL-----QDKMSGMG 364
Query: 248 LS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
L TY +I+ CK+ + +A ML+++ KRG+ + +T +++I GR+ +A+
Sbjct: 365 LKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAF 424
Query: 304 ----KVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
+++ P++S Y+ LI G R +EA ++ +EM G + + TY
Sbjct: 425 LLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTY------- 477
Query: 360 LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN 419
I V L K G++ A + ++ + G+ YN + Y
Sbjct: 478 ----------------NILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFR 521
Query: 420 E 420
E
Sbjct: 522 E 522
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 148/314 (47%), Gaps = 15/314 (4%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMV 128
F+ + IT+N ++D K+ + L+EM +R+ N+ TF I + +
Sbjct: 260 FSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAK 319
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGY 187
F M G + ++ N ++ LC + EA L K+S +KPN + Y LI G+
Sbjct: 320 KVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGF 379
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C L EA ++ + + G P++ + +I+ + K + D+A + MM D G
Sbjct: 380 CKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMML-----DTG 434
Query: 248 L----STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
+ STY +I C+ G + +A + +EM G++AD +T + ++ L +G R+A
Sbjct: 435 VCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAV 494
Query: 304 KVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
++++E+ P Y+ LI G R + A V M K+G + TY +L++G
Sbjct: 495 RLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGF 554
Query: 360 LGKRGRKGPDPLVN 373
K + + L+N
Sbjct: 555 CNKGKLEEANRLLN 568
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 98/424 (23%), Positives = 171/424 (40%), Gaps = 77/424 (18%)
Query: 56 VYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRN-------IDLF-----------WETL 97
+ +F++TQK HN F R++ ++ ++N +D F + +L
Sbjct: 90 ILCYFKWTQKEFGAI-HNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNSTIFHSL 148
Query: 98 QEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQ-- 155
+G N + + + E+ + F D G S N ++ +L +
Sbjct: 149 SVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEG 208
Query: 156 RKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVV 215
R VVE+ Y + + I N + + +I G C VG +A + M GF PS+
Sbjct: 209 RIGVVESVYKEM-IRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSV--- 264
Query: 216 DKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMF 275
TY +ID CK GK+ +A +L+EM
Sbjct: 265 ---------------------------------ITYNTIIDGYCKAGKMFKADALLKEMV 291
Query: 276 KRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAR 331
+ I + +T + +I G + A KV EE+++ P++ Y+ LI GL +
Sbjct: 292 AKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLD 351
Query: 332 EATQVFREMIKRGCEPTMHTYIMLLQGHLGKR------------GRKGPDP-LVNFDTIF 378
EA + +M G +P + TY L+ G K+ G++G P ++ F+T+
Sbjct: 352 EALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTL- 410
Query: 379 VGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
+ KAG+ DA +++ GV YN + + E V ++ K++ GL
Sbjct: 411 IDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGL 470
Query: 439 -ADL 441
ADL
Sbjct: 471 KADL 474
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 126/290 (43%), Gaps = 32/290 (11%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
L W N I L+ Y G++ A + ++ D GF S + M+ + K +
Sbjct: 151 LGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRI 210
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
V++ M ++R + + T+ +VI+ +CK GK +A ++E+M G +T ++
Sbjct: 211 GVVESVYKEM-IRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNT 269
Query: 289 IIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
II G G++ +A +++E+ P+ ++ LI G R A +VF EM ++G
Sbjct: 270 IIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQG 329
Query: 345 CEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVE 404
+P + TY + L+N GL GK +A +++ G++
Sbjct: 330 LQPNVVTY----------------NSLIN-------GLCSNGKLDEALGLQDKMSGMGLK 366
Query: 405 VPRFDYNKFLHYYSN----EEGVVMFEEVGKKLREVGLADLADIFQRYGK 450
YN ++ + +E M +++GK+ + + YGK
Sbjct: 367 PNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGK 416
>gi|240255563|ref|NP_190542.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546755|sp|P0C8A0.1|PP275_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49730
gi|332645062|gb|AEE78583.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 189/429 (44%), Gaps = 23/429 (5%)
Query: 6 GHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQK 65
G + ++ IL + +S +L +L+ +L +++ + + Y FF + K
Sbjct: 65 GEVEKIYRIL-RNHHSRVPKLELALNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLWATK 123
Query: 66 AQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRR--RLVNDKTFKIALMTLAEVRE 123
QP + H+ MV I+ K R W ++EM + L+ + F + + A
Sbjct: 124 -QPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANM 182
Query: 124 LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWL 183
+KK V M G E + ++ LC+ V EA + + E PN + L
Sbjct: 183 VKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSL 242
Query: 184 IKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM 243
+ G+C G L+EA ++ M + G EP I V ++ + K +A + MR KR
Sbjct: 243 LYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMR-KRG 301
Query: 244 DDLGLSTYRIVIDWMCKRGK-ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
+ ++ Y ++I +C+ K + +A + EM + G EAD +T +++I G G + +
Sbjct: 302 FEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKG 361
Query: 303 YKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY--IMLL 356
Y V++++ K P Y ++ + + E ++ +M +RGC P + Y ++ L
Sbjct: 362 YSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRL 421
Query: 357 QGHLGKRGR----------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV-EV 405
LG+ G P V+ I + G G ++A + + +++RG+
Sbjct: 422 ACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSA 481
Query: 406 PRFDYNKFL 414
P++ K L
Sbjct: 482 PQYGTLKSL 490
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 169/392 (43%), Gaps = 45/392 (11%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMV 128
A N ITFN +++ + K + E L M R D T++ ++ +L
Sbjct: 495 LAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTAT 554
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGY 187
+ + M G S+EM N + K + + ++S + PN + YG LI G+
Sbjct: 555 HLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGW 614
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ-MMRVKRMDDL 246
C G+L EA ++ M + G P++ + ++ F+K K DEA V Q ++ + +
Sbjct: 615 CKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGC 674
Query: 247 GLST------------------------YRIVIDWMCKRGKISQAYTMLEEMFKRGIEAD 282
+ST + ++I +CK G+I+ A ++ E + + D
Sbjct: 675 SISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPD 734
Query: 283 NLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFR 338
N T SS+I+G A G + EA+ + + + P+I Y+ LI GL + + A +F
Sbjct: 735 NFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFN 794
Query: 339 EMIKRGCEPTMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKA 385
++ +G P TY L+ + K G+ +G P V +I + GL
Sbjct: 795 KLQSKGISPNGITYNTLIDEYC-KEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQ 853
Query: 386 GKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
G +A K +++++ V+ Y +H Y
Sbjct: 854 GYMEEAIKLLDQMIENNVDPNYITYCTLIHGY 885
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 116/231 (50%), Gaps = 6/231 (2%)
Query: 123 ELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYG 181
E+ K+ + + D + M N ++ LC+ + +AK L L ++ P+ Y
Sbjct: 680 EIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYS 739
Query: 182 WLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK 241
LI G G + EA + ++M G P+I + +I K K A+ +F ++ K
Sbjct: 740 SLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSK 799
Query: 242 RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
+ G+ TY +ID CK GK ++A+ + ++M + GI+ +T S +IYGL +G + E
Sbjct: 800 GISPNGI-TYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEE 858
Query: 302 AYKVVEE-IEK---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
A K++++ IE P+ Y LI G ++ E ++++ EM RG PT
Sbjct: 859 AIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPT 909
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 168/394 (42%), Gaps = 56/394 (14%)
Query: 97 LQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSL----EMLNKVV-- 150
L E+ R + +F + L A+ +L +N F M GC SL +LNK+V
Sbjct: 137 LAEVYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQS 196
Query: 151 -----------------------------KTLCQRKLVVEAKYLILKLSEW-IKPNEIAY 180
K C+ V +A + ++ ++ N +AY
Sbjct: 197 GDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAY 256
Query: 181 GWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
++ YC +G +A +I + +G P++ +++ + K + +EA +V + M
Sbjct: 257 HAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEM-- 314
Query: 241 KRMDDLGLS--TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR 298
K D+ + Y ++I+ C+RG++ A + EM GI + +++I GL GR
Sbjct: 315 KETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGR 374
Query: 299 LREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIM 354
+ E KV++E+E +PD Y+ LI G R R+A ++ R M++ G T TY
Sbjct: 375 MEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNT 434
Query: 355 LLQGHLGKRG------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
LL+G ++G P + + GL KAGK+ A + + RG
Sbjct: 435 LLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARG 494
Query: 403 VEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREV 436
+ +N ++ + EE+ +++E+
Sbjct: 495 LAKNVITFNTVINGLCKIGRMAEAEELLDRMKEL 528
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 162/361 (44%), Gaps = 27/361 (7%)
Query: 111 FKIALMTLAEVRE--LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK 168
F +A+M A R+ + + V F M G E +L + V+ C +A+ ++
Sbjct: 219 FTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILES 278
Query: 169 LS-EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVV--DKMIETFFKI 225
L + + PN + Y L+KGYC G + EA ++ M + G + +D V MI + +
Sbjct: 279 LQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETG-DIVVDEVAYGMMINGYCQR 337
Query: 226 NKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
+ D+A +V MR + + L Y +I+ +CK G++ + +L+EM G+ D +
Sbjct: 338 GRMDDATRVRNEMRDAGI-HVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYS 396
Query: 286 LSSIIYGLLARGRLREAYKVVEEIEKPDIS----LYHGLIKGLLRLRRAREATQVFREMI 341
+++I G G +R+A+++ + + ++ Y+ L+KG L +A +++ M+
Sbjct: 397 YNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLML 456
Query: 342 KRGCEPTMHTYIMLLQGHLGKRG--------------RKGPDPLVNFDTIFVGGLVKAGK 387
KRG P + LL G L K G R ++ F+T+ + GL K G+
Sbjct: 457 KRGVAPNEISCSTLLDG-LFKAGKTEQALNLWKETLARGLAKNVITFNTV-INGLCKIGR 514
Query: 388 SLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLADIFQR 447
+A + ++R+ Y Y + + K+ +G A ++F
Sbjct: 515 MAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNS 574
Query: 448 Y 448
+
Sbjct: 575 F 575
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 146/310 (47%), Gaps = 24/310 (7%)
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M D G +L + N ++ LC+ + E + ++ ++ + ++P++ +Y LI GYC G
Sbjct: 350 MRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGS 409
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM--RVKRMDDLGLST 250
+ +A ++ +M G + + +++ F ++ D+A++++ +M R +++ ST
Sbjct: 410 MRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCST 469
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
++D + K GK QA + +E RG+ + +T +++I GL GR+ EA ++++ ++
Sbjct: 470 ---LLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMK 526
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL------ 360
+ PD Y L G +L + AT + +M G P++ + + GH
Sbjct: 527 ELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWH 586
Query: 361 ------GKRGRKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
+ +G P LV + + + G K G +A ++N G+ F +
Sbjct: 587 KVNDIHSEMSARGLSPNLVTYGAL-IAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSAL 645
Query: 414 LHYYSNEEGV 423
+ + E V
Sbjct: 646 MSCFYKEGKV 655
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 127/284 (44%), Gaps = 24/284 (8%)
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
+ +++ L++ + D G L A +++ M G PS+ ++++ + A V+
Sbjct: 147 SAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVY 206
Query: 236 QMMRVKRM--DDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
MR+ + D+ T I+ C+ G+++QA +EEM G+E + + +++
Sbjct: 207 GQMRIAGVLPDEF---TVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCY 263
Query: 294 LARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG-CEPT 348
G +A +++E +++ P++ Y L+KG + R EA +V +EM + G
Sbjct: 264 CGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVD 323
Query: 349 MHTYIMLLQGHLGKRGRKGPDPLVNFD-------------TIFVGGLVKAGKSLDAAKYV 395
Y M++ G+ +RGR V + + GL K G+ + K +
Sbjct: 324 EVAYGMMINGYC-QRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVL 382
Query: 396 ERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLA 439
+ + + G+ ++ YN + Y E + E+ + + GLA
Sbjct: 383 QEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLA 426
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 4/200 (2%)
Query: 85 GKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLE 144
G+ + +E+L+ +R L ++ T+ + A + + + +M G ++
Sbjct: 714 GRIADAKSLFESLRN--KRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNII 771
Query: 145 MLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLM 203
N ++ LC+ + A L KL S+ I PN I Y LI YC G EA K+ M
Sbjct: 772 TYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKM 831
Query: 204 TDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGK 263
+EG +P++ +I +EA+K+ M ++ D TY +I K G
Sbjct: 832 VEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQM-IENNVDPNYITYCTLIHGYIKSGN 890
Query: 264 ISQAYTMLEEMFKRGIEADN 283
+ + + +EM RG+ N
Sbjct: 891 MEEISKLYDEMHIRGLLPTN 910
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 138/290 (47%), Gaps = 7/290 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHI 133
+T+N +V+ I + +D E L+ + N ++ I L L +
Sbjct: 231 VTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGE 290
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGD 192
M GC ++ N ++ LC++ LV A ++ ++ ++ PN ++Y L+ +C
Sbjct: 291 MGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKK 350
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ +A +LM G P I + ++ + + D A+++ ++ K + L +Y
Sbjct: 351 MDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPV-LISYN 409
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
VID + K GK +A +L EM +G++ D +T S+I GL R+ +A + +++
Sbjct: 410 TVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDM 469
Query: 311 --KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+P+ LY+ +I GL + R A +F MI GC P TY +L++G
Sbjct: 470 GIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEG 519
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 116/252 (46%), Gaps = 33/252 (13%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+ +AY ++ GYC G ++A++ W + E D +I + A+ V
Sbjct: 126 PDVMAYNAMMAGYCGAGQ-VDAARRW--CAERAVERDAYTCDTLIRGLCGRGRTANALAV 182
Query: 235 F-QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
+M+R + + D+ TY I+++ CKR QA +L+EM +G D +T + ++ G+
Sbjct: 183 LDEMLRRRCVPDV--VTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGI 240
Query: 294 LARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
GR+ +A + ++ + +P+ Y+ ++KGL R +A ++ EM ++GC P +
Sbjct: 241 CQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNV 300
Query: 350 HTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFD 409
T+ ML+ L ++G P A + +E++ G
Sbjct: 301 VTFNMLIS-FLCRKGLVEP----------------------ALEVLEQIPKYGCSPNSLS 337
Query: 410 YNKFLHYYSNEE 421
YN LH + ++
Sbjct: 338 YNPLLHAFCKQK 349
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 94/212 (44%), Gaps = 3/212 (1%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVN 129
+ NS+++N ++ K + +D L M R D ++ L L E+ V
Sbjct: 332 SPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVE 391
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYC 188
H + D GC L N V+ L + EA L+ ++ S+ ++P+ I Y + G C
Sbjct: 392 LLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLC 451
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
+ +A + + + D G P+ + + +I K + A+ +F M +
Sbjct: 452 REDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYM-IGNGCMPNE 510
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIE 280
STY I+I+ + G I +A +L+E+ RG E
Sbjct: 511 STYTILIEGLAYEGLIKEARDLLDELCSRGEE 542
>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g19440, chloroplastic-like [Cucumis sativus]
Length = 799
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 123/262 (46%), Gaps = 17/262 (6%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
I+P+ Y +L++G C+VG L +A K+W+ G +I M+E + K N+ ++
Sbjct: 531 IQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVE 590
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
+F + K+M +L Y I+I C+ G ++ A +LE M +GI + T SS+I+G
Sbjct: 591 NLFNELLSKKM-ELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHG 649
Query: 293 LLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
+ G + +A +++E+ K P++ Y LI G +L + A + EMI P
Sbjct: 650 VCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPN 709
Query: 349 MHTYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVE 396
TY +++ G+ L K G P V + G KA +A K +
Sbjct: 710 KFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCD 769
Query: 397 RVMNRGVEVPRFDYNKFLHYYS 418
++ G+ V Y +H ++
Sbjct: 770 QMATEGLPVDEITYTTLVHGWN 791
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 152/353 (43%), Gaps = 29/353 (8%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMN 135
T N + + K+ + E + M + +F + L + +++ + F M
Sbjct: 188 TCNFXLSSLVKANEFEKCCEVFRVMSEGACPDVFSFTNVINALCKGGKMENAIELFMKME 247
Query: 136 DCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLI 194
G ++ N ++ LCQ + A L K++ + ++PN YG LI G +
Sbjct: 248 KLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFD 307
Query: 195 EASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIV 254
+ + I + M GF P++ V + +I+ + K+ + A+K+ +M K + ++ Y +
Sbjct: 308 KVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSL- 366
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE---- 310
+ CK +I A LEE+ G+ S+++ L + R A++ + +
Sbjct: 367 MQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNF 426
Query: 311 KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDP 370
+P L L+ GL + + EAT+++ ++++G + T L+
Sbjct: 427 RPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIH------------- 473
Query: 371 LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGV 423
GL AGK +A++ V+ ++ RG+ + R YN + + NE V
Sbjct: 474 ----------GLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKV 516
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 133/300 (44%), Gaps = 15/300 (5%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMV 128
F N + FN ++D K NI+ + M + + +LM + +++
Sbjct: 321 FNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAE 380
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGY 187
N + G + VV LC++ A ++ + LS +P+++ L+ G
Sbjct: 381 NALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGL 440
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C G +EA+++W + ++G S + +I K EA ++ VK M + G
Sbjct: 441 CKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRI-----VKEMLERG 495
Query: 248 LS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
L TY +I C GK+ + + EEM KRGI+ D T + ++ GL G+L +A
Sbjct: 496 LPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAI 555
Query: 304 KVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
K+ +E + +I Y +++G + R + +F E++ + E Y ++++ H
Sbjct: 556 KLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAH 615
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 87/168 (51%), Gaps = 6/168 (3%)
Query: 196 ASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVI 255
A ++ L+ +G PS+ + + + K N+ ++ +VF++M D+ ++ VI
Sbjct: 170 AVDVFYLLARKGTFPSLKTCNFXLSSLVKANEFEKCCEVFRVMSEGACPDV--FSFTNVI 227
Query: 256 DWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----K 311
+ +CK GK+ A + +M K GI + +T + II GL GRL A+++ E++ +
Sbjct: 228 NALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQ 287
Query: 312 PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
P++ Y LI GL++L + + EMI G P + + L+ G+
Sbjct: 288 PNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGY 335
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 97/219 (44%), Gaps = 3/219 (1%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIM 134
T+ M++ K+ I+ E+ +++ +N + I + + + + M
Sbjct: 572 TYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENM 631
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDL 193
G + + ++ +C LV +AK+LI ++ E PN + Y LI GYC +G +
Sbjct: 632 KSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQM 691
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
A W M P+ MI+ + K+ ++A + M+ + + TY +
Sbjct: 692 DTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVP-DVVTYNV 750
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
+ + CK + A+ + ++M G+ D +T +++++G
Sbjct: 751 LTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHG 789
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 37/187 (19%), Positives = 82/187 (43%), Gaps = 2/187 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
NSI +N ++ ++ N+ + L+ M + ++ N T+ + + + ++ +
Sbjct: 604 NSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLI 663
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDV 190
M G ++ ++ C+ + A+ L++ + I PN+ Y +I GYC +
Sbjct: 664 DEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKL 723
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G++ +A+ + M + G P + + + F K N D A KV M + + ++
Sbjct: 724 GNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITY 783
Query: 251 YRIVIDW 257
+V W
Sbjct: 784 TTLVHGW 790
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 163/362 (45%), Gaps = 20/362 (5%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHI 133
+ F +++ ++ + DL Q+M R+++ D +F I + +L ++ F
Sbjct: 80 VDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGK 139
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWI-KPNEIAYGWLIKGYCDVGD 192
+ G + N ++ LC V EA L ++ E +PN + + L+ G C G
Sbjct: 140 ITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGR 199
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
++EA + + M ++G +P+ +++ K A+ + + M + Y
Sbjct: 200 IVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYS 259
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK- 311
+ID +CK G+ S A + EM ++GI D T +S+I G + GR +A ++++E+ +
Sbjct: 260 AIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER 319
Query: 312 ---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR----- 363
PD+ Y+ LI ++ + EA +++ EM+ RG P TY ++ G +
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAA 379
Query: 364 -------GRKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
KG P L+ F+T+ + G A + D + + + G+ YN +H
Sbjct: 380 EHMFYLMATKGCSPNLITFNTL-IDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIH 438
Query: 416 YY 417
+
Sbjct: 439 GF 440
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 137/300 (45%), Gaps = 16/300 (5%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHI 133
+T+N +++ K E EM R ++ N T+ + + L + F++
Sbjct: 326 VTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYL 385
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M GC +L N ++ C K + + L+ +++E + + Y LI G+ VGD
Sbjct: 386 MATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGD 445
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD-------- 244
L A + M G P I D +++ K +A+++F++M+ + D
Sbjct: 446 LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFN 505
Query: 245 --DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
+ + TY I+I + GK +A + EEM RGI D +T SS+I GL + RL EA
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 303 YKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
++ + + P++ + LI G + R + ++F EM +RG TYI L+ G
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICG 625
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 140/332 (42%), Gaps = 24/332 (7%)
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGY 187
N F M + G L N ++ C +A+ L+ ++ E I P+ + Y LI +
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAF 335
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
G EA ++++ M G P+ MI+ F K N+ D A +F +M K
Sbjct: 336 VKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP-N 394
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
L T+ +ID C +I +L EM + G+ AD T +++I+G G L A +++
Sbjct: 395 LITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQ 454
Query: 308 EIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE-PTMHTYIMLLQGHLGK 362
E+ PDI L+ GL + ++A ++F+ M K + H +
Sbjct: 455 EMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPF---------- 504
Query: 363 RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE-- 420
G +P V I + GL+ GK L+A + E + +RG+ Y+ + +
Sbjct: 505 ---NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561
Query: 421 --EGVVMFEEVGKKLREVGLADLADIFQRYGK 450
E MF+ +G K + + Y K
Sbjct: 562 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCK 593
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 108/235 (45%), Gaps = 18/235 (7%)
Query: 147 NKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
+ ++ C++ + A+++ L ++ PN I + LI GYC + + ++ + MT+
Sbjct: 364 SSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTE 423
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKIS 265
G + +I F+ + + A+ + Q M + + T ++D +C GK+
Sbjct: 424 TGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCP-DIVTCDTLLDGLCDNGKLK 482
Query: 266 QAYTMLEEMFK-----------RGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK--- 311
A M + M K G+E D T + +I GL+ G+ EA ++ EE+
Sbjct: 483 DALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542
Query: 312 -PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
PD Y +I GL + R EATQ+F M + P + T+ L+ G+ K GR
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYC-KAGR 596
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 125/296 (42%), Gaps = 19/296 (6%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKT-FKIALMTLAE 120
Y + C + N ITFN ++D ++ ID E L EM LV D T + +
Sbjct: 384 YLMATKGC-SPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYL 442
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA--KYLILKLSE------- 171
V +L ++ M G + + ++ LC + +A + +++ S+
Sbjct: 443 VGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASH 502
Query: 172 ---WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++P+ Y LI G + G +EA +++ M G P MI+ K ++
Sbjct: 503 PFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 562
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
DEA ++F M K + T+ +I+ CK G++ + EM +RGI A+ +T +
Sbjct: 563 DEATQMFDSMGSKSFSP-NVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYIT 621
Query: 289 IIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREM 340
+I G G + A + +E+ PD ++ GL + A + ++
Sbjct: 622 LICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Vitis vinifera]
Length = 877
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 186/387 (48%), Gaps = 32/387 (8%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHIM 134
++ ++ + K N +L E L+EM R V ++ TF ++ + + + M
Sbjct: 297 AYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEM 356
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDL 193
+CG +L + ++K C + + A L K++E + PN++ Y LI+G C+ G++
Sbjct: 357 INCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNI 416
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS---T 250
+AS+++ M G PS+ V+ ++ + K +EA K+F D G++ T
Sbjct: 417 EKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFD-----EAVDCGVANIFT 471
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI- 309
Y I++ W+CK GK+ +A ++L+ M +G+ + ++ + +I G +G + A V ++
Sbjct: 472 YNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDML 531
Query: 310 ---EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR- 365
KP++ Y LI G + + +A +F +M+ PT T+ ++ G L K G+
Sbjct: 532 ARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIING-LCKVGQM 590
Query: 366 -KGPDPLVNF------------DTIFVGGLVKAGKSLDAAKYVERVMNR-GVEVPRFDYN 411
+ D L NF ++I V G +K G ++D+A V R M GV Y
Sbjct: 591 SEARDKLKNFLEEGFIPSCMTYNSI-VDGFIKEG-NIDSALAVYREMCEFGVSPNVVTYT 648
Query: 412 KFLHYYSNEEGVVMFEEVGKKLREVGL 438
++ + + + + ++RE GL
Sbjct: 649 SLINGFCKSNRIDLALKTRDEMREKGL 675
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 100/196 (51%), Gaps = 8/196 (4%)
Query: 179 AYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
AY LI G+C D+ A ++ + + G P+ V + MI F +N + A+ ++ M
Sbjct: 681 AYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKM 740
Query: 239 RVKRMD-DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
R+ DLG TY +ID + K G++ A + EM +GI D +T ++ GL +G
Sbjct: 741 INDRIPCDLG--TYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKG 798
Query: 298 RLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYI 353
+L A K++EE+++ P + +Y+ LI G R +EA + EM+ RG P TY
Sbjct: 799 QLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYD 858
Query: 354 MLLQGHL-GKRGRKGP 368
+L+ G G R P
Sbjct: 859 ILINGKFKGDRSLSRP 874
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 156/351 (44%), Gaps = 23/351 (6%)
Query: 73 NSITFNRMVDIIGKSR--NIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVN 129
N +++N M I+G R N+D+ +M R L N T+ I + + + +K ++
Sbjct: 503 NVVSYNDM--ILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALD 560
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYC 188
F M + N ++ LC+ + EA+ + L E P+ + Y ++ G+
Sbjct: 561 LFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFI 620
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
G++ A ++ M + G P++ +I F K N+ D A+K MR K ++ L +
Sbjct: 621 KEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLE-LDV 679
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY----K 304
+ Y +ID CKR + A + E+ + G+ + + +S+I G + A K
Sbjct: 680 TAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKK 739
Query: 305 VVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK-- 362
++ + D+ Y LI GLL+ R A+ ++ EM+ +G P + T+ +L+ G K
Sbjct: 740 MINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQ 799
Query: 363 ----------RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
RK P V + G + G +A + +++RG+
Sbjct: 800 LENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGL 850
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 135/320 (42%), Gaps = 54/320 (16%)
Query: 136 DCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLI 194
DCG ++ N ++ LC+ + EA L+ + ++ + PN ++Y +I G+C G++
Sbjct: 463 DCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMD 521
Query: 195 EASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM---------------- 238
AS +++ M +P++ +I+ FK ++A+ +F M
Sbjct: 522 MASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTII 581
Query: 239 ----RVKRMDDL--------------GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIE 280
+V +M + TY ++D K G I A + EM + G+
Sbjct: 582 NGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVS 641
Query: 281 ADNLTLSSIIYGLLARGRLREAYKVVEEIEKP----DISLYHGLIKGLLRLRRAREATQV 336
+ +T +S+I G R+ A K +E+ + D++ Y LI G + R A +
Sbjct: 642 PNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDL 701
Query: 337 FREMIKRGCEPTMHTYIMLLQGHLGKRGRKG-------------PDPLVNFDTIFVGGLV 383
F E+++ G P Y ++ G + P L + T+ + GL+
Sbjct: 702 FFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTL-IDGLL 760
Query: 384 KAGKSLDAAKYVERVMNRGV 403
K G+ + A+ ++++G+
Sbjct: 761 KEGRLVFASDLYMEMLSKGI 780
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 5/168 (2%)
Query: 195 EASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIV 254
E ++N M G V M+ K + +EA + F+ + +R L Y I+
Sbjct: 243 ELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETK-ERGVKLDAGAYSII 301
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI---EK 311
I +CK+ + +LEEM +RG T +S+I +A+G + EA ++ EE+ K
Sbjct: 302 IQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGK 361
Query: 312 P-DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
P ++ + L+KG A +F ++ + G P TY +L++G
Sbjct: 362 PMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEG 409
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 77/178 (43%), Gaps = 7/178 (3%)
Query: 184 IKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM 243
+ G D ++ + N FE V + ++ + + N+ + A+ F M +
Sbjct: 162 VSGDSDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQ-- 219
Query: 244 DDLGLSTY-RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
D + Y I++ + +R I + + +M RGI D+ T+ ++ L GR+ EA
Sbjct: 220 DVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEA 279
Query: 303 YKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
+ E + K D Y +I+ + + + ++ EM +RG P+ T+ ++
Sbjct: 280 EEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVI 337
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 100/262 (38%), Gaps = 79/262 (30%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT------------- 117
+ N +T+ +++ KS IDL +T EM + L D T AL+
Sbjct: 641 SPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQD 700
Query: 118 ----LAEV----------------RELKKM----VNFFHIMND---CGCEYSLEMLNKVV 150
L EV R+L M V + ++ND C +++ ++
Sbjct: 701 LFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLL 760
Query: 151 KTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEP 210
K + +LV + + LS+ I P+ I + L+ G C+ G L A KI M + P
Sbjct: 761 K---EGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTP 817
Query: 211 SIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTM 270
S+ + + +I +F + G + +A+T+
Sbjct: 818 SVLIYNTLIAGYF------------------------------------REGNLKEAFTL 841
Query: 271 LEEMFKRGIEADNLTLSSIIYG 292
+EM RG+ D++T +I G
Sbjct: 842 HDEMLDRGLVPDDVTYDILING 863
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 146/327 (44%), Gaps = 22/327 (6%)
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCD 189
F + G +++ N V+ +CQ + EA +L+L + + P+ I+Y ++ GYC
Sbjct: 677 FREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR 736
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGL 248
G+L + K+ +M +G +P+ + +I +I K EA + F +M+R + D
Sbjct: 737 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPD--T 794
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
Y +ID CKRG I A EM R I D LT ++II G G + EA K+ E
Sbjct: 795 VVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE 854
Query: 309 I----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
+ +PD + LI G + ++A +V MI+ GC P + TY L+ G L K G
Sbjct: 855 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDG-LCKEG 913
Query: 365 -------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
+ G P + V GL K+G +A K V G+ Y
Sbjct: 914 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 973
Query: 412 KFLHYYSNEEGVVMFEEVGKKLREVGL 438
+ Y + +E+ K++ GL
Sbjct: 974 TLMDAYCKSGEMDKAQEILKEMLGKGL 1000
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 143/295 (48%), Gaps = 7/295 (2%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMV 128
+ + I+++ +V+ + +D W+ ++ M R+ L N + + L + +L +
Sbjct: 720 YTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 779
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGY 187
F M G + ++ C+R + A ++ S I P+ + Y +I G+
Sbjct: 780 EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 839
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C +GD++EA K+++ M +G EP ++I + K +A +V M ++
Sbjct: 840 CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM-IQAGCSPN 898
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
+ TY +ID +CK G + A +L EM+K G++ + T +SI+ GL G + EA K+V
Sbjct: 899 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 958
Query: 308 EIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
E E D Y L+ + +A ++ +EM+ +G +PT+ T+ +L+ G
Sbjct: 959 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 1013
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 161/362 (44%), Gaps = 29/362 (8%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
+++ + ++D K +I + EM R + D T+ + ++ ++ + F
Sbjct: 793 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 852
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDV 190
H M G E +++ C+ + +A + + PN + Y LI G C
Sbjct: 853 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 912
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS- 249
GDL A+++ + M G +P+I + ++ K +EA+K+ V + GL+
Sbjct: 913 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL-----VGEFEAAGLNA 967
Query: 250 ---TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
TY ++D CK G++ +A +L+EM +G++ +T + ++ G G L + K++
Sbjct: 968 DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 1027
Query: 307 EEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
+ P+ + ++ L+K + AT ++++M RG P TY L++GH
Sbjct: 1028 NWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKA 1087
Query: 363 RGR------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPR--F 408
R KG V+ ++ + G +K K L+A + +++ G+ + F
Sbjct: 1088 RNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 1147
Query: 409 DY 410
D+
Sbjct: 1148 DF 1149
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 117/251 (46%), Gaps = 28/251 (11%)
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFK-INKDDEAMKVFQMMRVKRMDDLG 247
D G L EA +++ M + G S+D + + K K A+ VF + ++G
Sbjct: 630 DFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVF-----REFPEVG 684
Query: 248 L----STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
+ ++Y IVI ++C+ G+I +A+ +L M +G D ++ S+++ G G L + +
Sbjct: 685 VCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVW 744
Query: 304 KVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
K++E ++ KP+ +Y +I L R+ + EA + F EMI++G P Y L+ G
Sbjct: 745 KLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG- 803
Query: 360 LGKRG-------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
KRG + P V T + G + G ++A K + +G+E
Sbjct: 804 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD 863
Query: 407 RFDYNKFLHYY 417
+ + ++ Y
Sbjct: 864 SVTFTELINGY 874
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 115/259 (44%), Gaps = 3/259 (1%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMT 117
F + Q + N +T+ ++D + K ++D E L EM + L N T+ +
Sbjct: 884 FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNG 943
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPN 176
L + +++ V G ++ C+ + +A+ ++ + L + ++P
Sbjct: 944 LCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPT 1003
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
+ + L+ G+C G L + K+ N M +G P+ + +++ + N A +++
Sbjct: 1004 IVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYK 1063
Query: 237 MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR 296
M + + G TY ++ CK + +A+ + +EM +G T S +I G L R
Sbjct: 1064 DMCSRGVGPDG-KTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKR 1122
Query: 297 GRLREAYKVVEEIEKPDIS 315
+ EA +V +++ + ++
Sbjct: 1123 KKFLEAREVFDQMRREGLA 1141
>gi|242063152|ref|XP_002452865.1| hypothetical protein SORBIDRAFT_04g033840 [Sorghum bicolor]
gi|241932696|gb|EES05841.1| hypothetical protein SORBIDRAFT_04g033840 [Sorghum bicolor]
Length = 551
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/412 (24%), Positives = 178/412 (43%), Gaps = 32/412 (7%)
Query: 28 SSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIG-- 85
++L + LT + + + + FF + Q ++H S T+N ++DI+
Sbjct: 97 AALDALGTELTTPLVADVLHRLRYEEKLAFRFFAWASH-QDGYSHESATYNDIIDILSGT 155
Query: 86 --KSRNIDLFWETLQEMGRRRL----VNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGC 139
KSR + L M R V D + T + ++K+ +
Sbjct: 156 RYKSRQFGVLCNVLDHMKRHGTRSVPVEDLLEILRAYTEKHLTHMRKLAKKRRVRLRTPP 215
Query: 140 EYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKI 199
E + LN ++ C+ +V EA+ + ++ + N Y L G+C D +A K+
Sbjct: 216 E--TDALNVLLDAFCKCGMVKEAEAVFGRVKRRLLGNAETYSILFFGWCRARDPKKAMKV 273
Query: 200 WNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK--RMDDLGLSTYRIVIDW 257
M P IE+F EA ++F+ MR + + TY I+I
Sbjct: 274 LEEMIQMKHTPESFTYIAAIESFCSAGLVSEARELFEFMRTEGSTISSPTAKTYSIMIVA 333
Query: 258 MCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PD 313
+ K ++ + + +L +M G D T +I G+ G+L AY+V+EE+ + PD
Sbjct: 334 LAKADRMEECFELLSDMRSCGCMPDVSTYKELIEGMCLVGKLDAAYRVLEEMGRAGFPPD 393
Query: 314 ISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY--IMLLQGHLGKRGR------ 365
I Y+ + L LR+A +A ++ MI+ CEP++HTY +M++ +G+ R
Sbjct: 394 IVTYNCFLNVLCSLRKADDALELCERMIEAHCEPSVHTYNMLMVMFFEMGEAHRALDIWL 453
Query: 366 ----KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
+G ++ I + GL GK+ A ++ V+NR + + Y KF
Sbjct: 454 EMDTRGCQRAIDTYEIMIDGLFDCGKTEHATSLLDEVINRDM---KLSYKKF 502
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 100/248 (40%), Gaps = 30/248 (12%)
Query: 210 PSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYT 269
P D ++ +++ F K EA VF RVKR TY I+ C+ +A
Sbjct: 215 PETDALNVLLDAFCKCGMVKEAEAVFG--RVKRRLLGNAETYSILFFGWCRARDPKKAMK 272
Query: 270 MLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE-------EIEKPDISLYHGLIK 322
+LEEM + ++ T + I + G + EA ++ E I P Y +I
Sbjct: 273 VLEEMIQMKHTPESFTYIAAIESFCSAGLVSEARELFEFMRTEGSTISSPTAKTYSIMIV 332
Query: 323 GLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------------LGKRGRKGPDP 370
L + R E ++ +M GC P + TY L++G L + GR G P
Sbjct: 333 ALAKADRMEECFELLSDMRSCGCMPDVSTYKELIEGMCLVGKLDAAYRVLEEMGRAGFPP 392
Query: 371 LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVG 430
+ F+ L K+ DA + ER++ E YN + VMF E+G
Sbjct: 393 DIVTYNCFLNVLCSLRKADDALELCERMIEAHCEPSVHTYNMLM---------VMFFEMG 443
Query: 431 KKLREVGL 438
+ R + +
Sbjct: 444 EAHRALDI 451
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 96/207 (46%), Gaps = 8/207 (3%)
Query: 109 KTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLV--VEAKYLI 166
KT+ I ++ LA+ +++ M CGC + ++++ +C LV ++A Y +
Sbjct: 325 KTYSIMIVALAKADRMEECFELLSDMRSCGCMPDVSTYKELIEGMC---LVGKLDAAYRV 381
Query: 167 LKL--SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFK 224
L+ P+ + Y + C + +A ++ M + EPS+ + ++ FF+
Sbjct: 382 LEEMGRAGFPPDIVTYNCFLNVLCSLRKADDALELCERMIEAHCEPSVHTYNMLMVMFFE 441
Query: 225 INKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNL 284
+ + A+ ++ M R + TY I+ID + GK A ++L+E+ R ++
Sbjct: 442 MGEAHRALDIWLEMDT-RGCQRAIDTYEIMIDGLFDCGKTEHATSLLDEVINRDMKLSYK 500
Query: 285 TLSSIIYGLLARGRLREAYKVVEEIEK 311
+I+ L A G L +++ E + +
Sbjct: 501 KFDAIMLRLSAVGDLGAIHRLSEHMRR 527
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 145/296 (48%), Gaps = 9/296 (3%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMV 128
+ N T + +++ + +DL + L ++ + L TF + L +V + + +
Sbjct: 129 LSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAM 188
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGY 187
F M GC + ++ LC+ A L+ K+ E +PN + Y +I +
Sbjct: 189 ELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSH 248
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR-VKRMDDL 246
+ EA I++ M +G P I + +I+ ++ EA + MR + M D+
Sbjct: 249 RKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDI 308
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
T+ +++D +CK GK+S+A +L+ M + G+E D +T SS++YG R + EA K+
Sbjct: 309 --VTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLF 366
Query: 307 EEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+ + KPD+ Y+ LI G +++R EA Q+F EMI +G P +Y L+ G
Sbjct: 367 DAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHG 422
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 133/279 (47%), Gaps = 13/279 (4%)
Query: 75 ITFNRMVDII---GKSRNIDLFWETLQEMG-RRRLVNDKTFKIALMTLAEVRELKKMVNF 130
+TFN +VD I GK +T+ EMG +V + +EV E +K+
Sbjct: 309 VTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKL--- 365
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCD 189
F M GC+ + N ++ C+ K + EAK L ++ + + PN ++Y LI G C
Sbjct: 366 FDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQ 425
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
+G L EA ++ M G P++ +++ F K +A ++F+ M+ L
Sbjct: 426 LGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQ-STYSKPNLV 484
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
Y I+ID MCK G + A + E+F +G++ + ++II GL G L EA + +
Sbjct: 485 MYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNM 544
Query: 310 EK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
E+ PD Y+ +I+G L + A Q+ EM +G
Sbjct: 545 EEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKG 583
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 111/227 (48%), Gaps = 6/227 (2%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEA 196
G + ++ ++ LC+ +A L + + +P+ Y +I G C +G+ A
Sbjct: 163 GLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAA 222
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVID 256
+ + M + G +P++ +I++ K + +EA+ +F M+VK + + TY +I
Sbjct: 223 AGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISP-DIFTYNSLIQ 281
Query: 257 WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----P 312
+C + +A +L EM I D +T + ++ + G++ EA V++ + + P
Sbjct: 282 GLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEP 341
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
D+ Y L+ G EA ++F MI +GC+P + +Y +L+ G+
Sbjct: 342 DVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGY 388
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 77/180 (42%), Gaps = 42/180 (23%)
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRG 262
G P+I + +I F + + D A V + ++ LGL T+ +I+W+CK G
Sbjct: 128 GLSPNIYTLSILINCFSHLQRVDLAFSV-----LAKIIKLGLQPTIVTFTTLINWLCKVG 182
Query: 263 KISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISLYHGLIK 322
K +QA + ++M RG +PD+ Y +I
Sbjct: 183 KFAQAMELFDDMVARGC-------------------------------RPDVYTYTTIIN 211
Query: 323 GLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGL 382
GL ++ A + ++M + GC+P + TY ++ H ++ R+ + L F + V G+
Sbjct: 212 GLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSH--RKDRRVNEALDIFSYMKVKGI 269
>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Cucumis sativus]
Length = 822
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 123/262 (46%), Gaps = 17/262 (6%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
I+P+ Y +L++G C+VG L +A K+W+ G +I M+E + K N+ ++
Sbjct: 554 IQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVE 613
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
+F + K+M +L Y I+I C+ G ++ A +LE M +GI + T SS+I+G
Sbjct: 614 NLFNELLSKKM-ELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHG 672
Query: 293 LLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
+ G + +A +++E+ K P++ Y LI G +L + A + EMI P
Sbjct: 673 VCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPN 732
Query: 349 MHTYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVE 396
TY +++ G+ L K G P V + G KA +A K +
Sbjct: 733 KFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCD 792
Query: 397 RVMNRGVEVPRFDYNKFLHYYS 418
++ G+ V Y +H ++
Sbjct: 793 QMATEGLPVDEITYTTLVHGWN 814
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/353 (20%), Positives = 153/353 (43%), Gaps = 29/353 (8%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMN 135
T N ++ + K+ + E + M + +F + L + +++ + F M
Sbjct: 211 TCNFLLSSLVKANEFEKCCEVFRVMSEGACPDVFSFTNVINALCKGGKMENAIELFMKME 270
Query: 136 DCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLI 194
G ++ N ++ LCQ + A L K++ + ++PN YG LI G +
Sbjct: 271 KLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFD 330
Query: 195 EASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIV 254
+ + + + M GF P++ V + +I+ + K+ + A+K+ +M K + ++ Y +
Sbjct: 331 KVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSL- 389
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE---- 310
+ CK +I A LEE+ G+ S+++ L + R A++ + +
Sbjct: 390 MQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNF 449
Query: 311 KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDP 370
+P L L+ GL + + EAT+++ ++++G + T L+
Sbjct: 450 RPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIH------------- 496
Query: 371 LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGV 423
GL AGK +A++ V+ ++ RG+ + R YN + + NE V
Sbjct: 497 ----------GLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKV 539
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 133/300 (44%), Gaps = 15/300 (5%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMV 128
F N + FN ++D K NI+ + M + + +LM + +++
Sbjct: 344 FNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAE 403
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGY 187
N + G + VV LC++ A ++ + LS +P+++ L+ G
Sbjct: 404 NALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGL 463
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C G +EA+++W + ++G S + +I K EA ++ VK M + G
Sbjct: 464 CKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRI-----VKEMLERG 518
Query: 248 LS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
L TY +I C GK+ + + EEM KRGI+ D T + ++ GL G+L +A
Sbjct: 519 LPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAI 578
Query: 304 KVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
K+ +E + +I Y +++G + R + +F E++ + E Y ++++ H
Sbjct: 579 KLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAH 638
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 88/168 (52%), Gaps = 6/168 (3%)
Query: 196 ASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVI 255
A ++ L+ +G PS+ + ++ + K N+ ++ +VF++M D+ ++ VI
Sbjct: 193 AVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMSEGACPDV--FSFTNVI 250
Query: 256 DWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----K 311
+ +CK GK+ A + +M K GI + +T + II GL GRL A+++ E++ +
Sbjct: 251 NALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQ 310
Query: 312 PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
P++ Y LI GL++L + V EMI G P + + L+ G+
Sbjct: 311 PNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGY 358
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 97/219 (44%), Gaps = 3/219 (1%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIM 134
T+ M++ K+ I+ E+ +++ +N + I + + + + M
Sbjct: 595 TYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENM 654
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDL 193
G + + ++ +C LV +AK+LI ++ E PN + Y LI GYC +G +
Sbjct: 655 KSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQM 714
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
A W M P+ MI+ + K+ ++A + M+ + + TY +
Sbjct: 715 DTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVP-DVVTYNV 773
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
+ + CK + A+ + ++M G+ D +T +++++G
Sbjct: 774 LTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHG 812
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 37/187 (19%), Positives = 82/187 (43%), Gaps = 2/187 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
NSI +N ++ ++ N+ + L+ M + ++ N T+ + + + ++ +
Sbjct: 627 NSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLI 686
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDV 190
M G ++ ++ C+ + A+ L++ + I PN+ Y +I GYC +
Sbjct: 687 DEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKL 746
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G++ +A+ + M + G P + + + F K N D A KV M + + ++
Sbjct: 747 GNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITY 806
Query: 251 YRIVIDW 257
+V W
Sbjct: 807 TTLVHGW 813
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 141/299 (47%), Gaps = 15/299 (5%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMV 128
+ N +T+N +V+ + K+ ++ ++ M + + D T+ + + + + + +
Sbjct: 254 YVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEAL 313
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGY 187
H M GC ++ N ++ LC+ EA + L++ + + P+++ + LI G
Sbjct: 314 ELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGA 373
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C G+ +AS ++ M + +P + +I+ K + + A + +M +LG
Sbjct: 374 CKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLM-----GNLG 428
Query: 248 LS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
+ TY +++ +CK G+I + LEEM G +++T S++Y L R +A
Sbjct: 429 VPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDAL 488
Query: 304 KVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
++V +++ PD Y+ L+ GL + + +A V EM+ +G +P T+ G
Sbjct: 489 QLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGG 547
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/395 (22%), Positives = 169/395 (42%), Gaps = 54/395 (13%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+T+N +++ + KS + E +E+ +R D T+ + +L + +L++
Sbjct: 82 VTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGG 141
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW---IKPNEIAYGWLIKGYCDV 190
M+ GC ++ + ++ LC+ + EA+ LI +++ + PN I Y + G C
Sbjct: 142 MSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQ 201
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVV--DKMIETFFKINKDDEA----------------- 231
EA ++ + D S D V +I+ K + DEA
Sbjct: 202 SMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNDDMIAGGYVPNVVTY 261
Query: 232 -------MKVFQMMR----VKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFK 276
K +M R ++ M D G++ TY +++D CK ++ +A +L M
Sbjct: 262 NALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMAS 321
Query: 277 RGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRARE 332
RG + +T +SII GL R EA+++ ++ PD ++ LI G + +
Sbjct: 322 RGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQ 381
Query: 333 ATQVFREMIKRGCEPTMHTYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVG 380
A+ +F EM+ + +P + T+ L+ G L G G P V + V
Sbjct: 382 ASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVH 441
Query: 381 GLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
GL K+G+ + +++E +++ G Y ++
Sbjct: 442 GLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVY 476
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 162/373 (43%), Gaps = 28/373 (7%)
Query: 111 FKIALMTLAEVRELKKMVNFFHI-MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
+ I L +L E + + F M G ++ N ++ LC+ + L +L
Sbjct: 48 YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 107
Query: 170 SE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
+ P+ + Y LI C GDL EA ++ M+ G P++ +I K+ +
Sbjct: 108 VKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRI 167
Query: 229 DEAMKVFQMMRVKRMDDL-GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRG--IEADNLT 285
DEA ++ Q M K D L + TY +D +CK+ ++A ++ + + D +T
Sbjct: 168 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 227
Query: 286 LSSIIYGLLARGRLREAYK--VVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
S++I GL G+ EA ++ P++ Y+ L+ GL + + A + M+ +
Sbjct: 228 FSTLIDGLCKCGQTDEACNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDK 287
Query: 344 GCEPTMHTYIMLLQGH------------LGKRGRKGPDP-LVNFDTIFVGGLVKAGKSLD 390
G P + TY +L+ L +G P +V F++I + GL K+ +S +
Sbjct: 288 GVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSI-IDGLCKSDRSGE 346
Query: 391 AAKYVERVMNRGVEVPRFDYNKFLHYYSN----EEGVVMFEE-VGKKLRE--VGLADLAD 443
A + +V NR + + +N + E+ +FEE V K ++ + L D
Sbjct: 347 AFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALID 406
Query: 444 IFQRYGKKMATRE 456
+ G+ A R+
Sbjct: 407 GLCKAGQVEAARD 419
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 107/231 (46%), Gaps = 7/231 (3%)
Query: 73 NSITFNRMVDIIGKS-RNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNF 130
N +TFN ++D + KS R+ + F LQ + R LV DK TF I + + ++
Sbjct: 327 NVVTFNSIIDGLCKSDRSGEAFQIALQ-VYNRMLVPDKVTFNILIAGACKAGNFEQASAL 385
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL--SEWIKPNEIAYGWLIKGYC 188
F M + + ++ LC+ V EA IL L + + PN + Y L+ G C
Sbjct: 386 FEEMVAKNMQPDVMTFGALIDGLCKAGQV-EAARDILDLMGNLGVPPNVVTYNVLVHGLC 444
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
G + E + M G P ++ + ++ D+A+++ ++ D +
Sbjct: 445 KSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTV 504
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
TY I++D + K GK QA T+LEEM +G + D+ T ++ GL G L
Sbjct: 505 -TYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNL 554
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 65/129 (50%), Gaps = 6/129 (4%)
Query: 242 RMDDLGLSTYRIVIDWMCKRGKISQAYTMLE-EMFKRGIEADNLTLSSIIYGLLARGRLR 300
R ++ Y IV+ +C+ G+ ++A + EM + G+ +T ++II GL L
Sbjct: 39 RSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELG 98
Query: 301 EAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
++ EE+ K PD+ Y+ LI L + EA ++ M RGC P + TY +L+
Sbjct: 99 AGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLI 158
Query: 357 QGHLGKRGR 365
G L K GR
Sbjct: 159 NG-LCKVGR 166
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 163/347 (46%), Gaps = 20/347 (5%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
F +I ++ +++ + K ++ E +++M R + T+ + L + + + +
Sbjct: 76 FKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAPPDALTYGPIVERLCKTKRIDDALA 135
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYC 188
M G + + N V+ LCQ + V EA+ L K+ + I PN + Y LI G C
Sbjct: 136 TVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLC 195
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
+ A +++ M +G+ P+ + +I+ F K A VF M V+ +
Sbjct: 196 KAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKM-VRSNCVPNV 254
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY +ID + K GK+ A +L+ M K+G+ + T S +I G R+ EA+K++E+
Sbjct: 255 VTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQ 314
Query: 309 IE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
+ P + Y+ L+ L R + +A ++FR M +R C PT+ TY LL+ +
Sbjct: 315 MVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQ 374
Query: 365 RKG-------------PDPLVNFDTIFVGGLVKAGKSLDAAKYVERV 398
G P + +DT+ GL +AGK +A + +E++
Sbjct: 375 LDGAHRLYAEMIAKGCPPDAITYDTL-AWGLTRAGKVHEAQELMEKM 420
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 153/359 (42%), Gaps = 18/359 (5%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRR-LVNDKTFKIALMTLAEVRELKKMVNFF 131
+ TFN + D K+ ++ E Q M + + I + L +V +
Sbjct: 9 GAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLL 68
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVG 191
H M + + ++ LC+ V EA+ LI K++ + P+ + YG +++ C
Sbjct: 69 HTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAPPDALTYGPIVERLCKTK 128
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTY 251
+ +A M G +P + + ++ + K +EA +F+ M VK+ + + TY
Sbjct: 129 RIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKM-VKQRINPNVVTY 187
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK 311
+I+ +CK +I AY + +EM +G ++ +++I G + L A V +++ +
Sbjct: 188 NTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVR 247
Query: 312 ----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH-------- 359
P++ Y LI GL + + + A +V M+K+G P + TY L+ G
Sbjct: 248 SNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDE 307
Query: 360 ----LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
L + +G P V I + L +A K DA K + R YN L
Sbjct: 308 AHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLL 366
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 117/279 (41%), Gaps = 51/279 (18%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P + + G+ G L + +++ M + G+ +I K+ DEA K+
Sbjct: 8 PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTML----------------------- 271
MR+KR ++ Y +I+W+CK ++ +A ++
Sbjct: 68 LHTMRLKRFKRKAIA-YSTIINWLCKLNRVEEARELIEKMARYAPPDALTYGPIVERLCK 126
Query: 272 -----------EEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISL 316
EEM RGI+ D + ++ GL ++ EA + E++ K P++
Sbjct: 127 TKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVT 186
Query: 317 YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG------------ 364
Y+ LI GL + R A ++F+EM +G PT +Y L+ G K+
Sbjct: 187 YNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMV 246
Query: 365 RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
R P V T + GL K+GK AA+ ++ ++ +GV
Sbjct: 247 RSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGV 285
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 120/240 (50%), Gaps = 3/240 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALMTLAEVRELKKMVNFF 131
N +T+N +++ + K+ I+ +E +EM G+ + + ++ + + ++L + F
Sbjct: 183 NVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVF 242
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQR-KLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDV 190
M C ++ ++ L + K+ A+ L + + + PN Y LI G+C V
Sbjct: 243 DKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKV 302
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
+ EA K+ M +G P++ + ++ + + +K ++A K+F+ M +R + T
Sbjct: 303 RRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPT-VVT 361
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y ++ +C ++ A+ + EM +G D +T ++ +GL G++ EA +++E+++
Sbjct: 362 YNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMK 421
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 172/363 (47%), Gaps = 38/363 (10%)
Query: 62 YTQKA--------QPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFK 112
YTQKA Q ++ TFN +++ K++ +D W+ +EM + N T+
Sbjct: 104 YTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYS 163
Query: 113 IALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SE 171
I + + + ++K + F M GC ++ ++ L + V +A +L ++ SE
Sbjct: 164 ILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSE 223
Query: 172 WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEA 231
+ + Y LI G G A+K++ M +G +P ++ + EA
Sbjct: 224 GLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEA 283
Query: 232 MKVFQMMRVKRMDDLG----LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLS 287
++FQ R D+G ++ Y ++ID +CK ++ +A+ + E+ + G+ D T +
Sbjct: 284 RRIFQEAR-----DVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFN 338
Query: 288 SIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
+++ GL GR+ +A+ ++ ++++ PD+++Y+ LI GL + R EA Q+ EM
Sbjct: 339 ALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSL 398
Query: 344 GCEPTMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLD 390
G EP + TY L+ K GR KG V ++TI + GL AG+ +
Sbjct: 399 GYEPDVVTYNTLIDESC-KGGRIEDALRLFEEISAKGFANTVTYNTI-LNGLCMAGRVDE 456
Query: 391 AAK 393
A K
Sbjct: 457 AYK 459
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 159/364 (43%), Gaps = 31/364 (8%)
Query: 95 ETLQEM-GRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTL 153
E L+ M G R + + + + +K + + +M G N ++
Sbjct: 75 EALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAF 134
Query: 154 CQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSI 212
+ K V L ++ ++ PN I Y LI C G + +A K++ M G P+I
Sbjct: 135 KKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNI 194
Query: 213 DVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIV----IDWMCKRGKISQAY 268
MI+ K D+A +F+ M + GL R+V I + + G+ A
Sbjct: 195 FTYTSMIDGLGKSGHVDKAFFLFEEMTSE-----GLVATRVVYNSLIHGLGRSGRADAAA 249
Query: 269 TMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP----DISLYHGLIKGL 324
+ EM +G++ D++T +S++YGL GR EA ++ +E D++LY+ LI L
Sbjct: 250 KLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTL 309
Query: 325 LRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG-------H-----LGKRGRKGPDPLV 372
+ +R EA ++F E+ + G P ++T+ L+ G H LG R G P V
Sbjct: 310 CKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDV 369
Query: 373 NFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN----EEGVVMFEE 428
+ GL K+G+ +A + + + + G E YN + E+ + +FEE
Sbjct: 370 TVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEE 429
Query: 429 VGKK 432
+ K
Sbjct: 430 ISAK 433
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 124/279 (44%), Gaps = 20/279 (7%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMT 117
FF + + + +N ++ +G+S D + +EM + L D TF +
Sbjct: 214 FFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYG 273
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPN 176
L + F D GC + + N ++ TLC+ K + EA + +L E + P+
Sbjct: 274 LGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPD 333
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
+ L+ G C G + +A + M G P + V + +I+ K + +EA ++
Sbjct: 334 VYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLL 393
Query: 237 MMRVKRMDDLG----LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
M LG + TY +ID CK G+I A + EE+ +G A+ +T ++I+ G
Sbjct: 394 -----EMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGF-ANTVTYNTILNG 447
Query: 293 LLARGRLREAYKV--------VEEIEKPDISLYHGLIKG 323
L GR+ EAYK+ V+ + PD Y L+ G
Sbjct: 448 LCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNG 486
>gi|255547888|ref|XP_002515001.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546052|gb|EEF47555.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 466
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 147/340 (43%), Gaps = 46/340 (13%)
Query: 33 CN-FNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNID 91
CN +L+HE ++ F W+ F++ + ++ + H+ ++ MVDI+GK + +D
Sbjct: 44 CNSIHLSHELVDKLLFRFKDDWKSALGVFRWAE-SRAGYKHSPEAYDTMVDIMGKMKQMD 102
Query: 92 LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVK 151
L+EM + + V KT A+ A R+ + ++ F + G E + E +N ++
Sbjct: 103 QMEFLLEEMEKGQHVTLKTVGKAMRRFAGARQWENVLRVFDKLGTFGLEKNTESMNLLLD 162
Query: 152 TLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPS 211
TLC+ + V A+ + L L I PN + I G+C V + EA M G P
Sbjct: 163 TLCKERKVELAREIFLDLKSHISPNANTFNIFIHGWCKVNRVEEAYWTIQEMKGHGCTPC 222
Query: 212 IDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTML 271
+ +Y ++ + C R S+ Y +L
Sbjct: 223 V------------------------------------ISYSTIVQFYCHRSNFSKVYELL 246
Query: 272 EEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRL 327
+EM +G+ + +T +S++ L EA ++ + ++ KPD Y+ LI L +
Sbjct: 247 DEMEAQGLIPNVVTYTSVMSALAKSEEYEEALQIAQRMKSVGCKPDTLFYNSLIHTLGKA 306
Query: 328 RRAREATQVFR-EMIKRGCEPTMHTY---IMLLQGHLGKR 363
R EA QVF EM G P TY I +L H +R
Sbjct: 307 GRPEEAIQVFEVEMPNTGVPPNTSTYNSMIAMLCHHSQER 346
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 101/251 (40%), Gaps = 19/251 (7%)
Query: 68 PCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKK 126
PC I+++ +V N +E L EM + L+ N T+ + LA+ E ++
Sbjct: 221 PCV----ISYSTIVQFYCHRSNFSKVYELLDEMEAQGLIPNVVTYTSVMSALAKSEEYEE 276
Query: 127 MVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA--KYLILKLSEWIKPNEIAYGWLI 184
+ M GC+ N ++ TL + EA + + + + PN Y +I
Sbjct: 277 ALQIAQRMKSVGCKPDTLFYNSLIHTLGKAGRPEEAIQVFEVEMPNTGVPPNTSTYNSMI 336
Query: 185 KGYCDVGDLIEASKIWNLMTD-EG---FEPSIDVVDKMIETFFKINKDDEAM-KVFQMMR 239
C + K NL+ + E +P + ++++ FK D + ++ M
Sbjct: 337 AMLCHHS---QERKALNLLKEIEASIICKPDVQTYYPLLKSCFKAGSIDSLLSQLLDDMV 393
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
K L S Y +++ +C+ K AY + EEM + + T LL +L
Sbjct: 394 KKHHLSLDFSAYTLLVHGLCRANKCEWAYCLFEEMIGKDMTPKYQTCRL----LLDEVKL 449
Query: 300 REAYKVVEEIE 310
+ Y ++IE
Sbjct: 450 KHMYDAAQKIE 460
>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
Length = 353
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 138/290 (47%), Gaps = 7/290 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHI 133
+T+N +V+ I + +D E L+ + N ++ I L L +
Sbjct: 28 VTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGE 87
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGD 192
M GC ++ N ++ LC++ LV A ++ ++ ++ PN ++Y L+ +C
Sbjct: 88 MGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKK 147
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ +A +LM G P I + ++ + + D A+++ ++ K + L +Y
Sbjct: 148 MDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPV-LISYN 206
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
VID + K GK +A +L EM +G++ D +T S+I GL R+ +A + +++
Sbjct: 207 TVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDM 266
Query: 311 --KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+P+ LY+ +I GL + R A +F MI GC P TY +L++G
Sbjct: 267 GIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEG 316
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 76/167 (45%), Gaps = 27/167 (16%)
Query: 259 CKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDI 314
CKR QA +L+EM +G D +T + ++ G+ GR+ +A + ++ + +P+
Sbjct: 3 CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT 62
Query: 315 SLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNF 374
Y+ ++KGL R +A ++ EM ++GC P + T+ ML+ L ++G P
Sbjct: 63 VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLIS-FLCRKGLVEP------ 115
Query: 375 DTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEE 421
A + +E++ G YN LH + ++
Sbjct: 116 ----------------ALEVLEQIPKYGCTPNSLSYNPLLHAFCKQK 146
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 93/209 (44%), Gaps = 3/209 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFF 131
NS+++N ++ K + +D L M R D ++ L L E+ V
Sbjct: 131 NSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELL 190
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
H + D GC L N V+ L + EA L+ ++ S+ ++P+ I Y + G C
Sbjct: 191 HQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCRE 250
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
+ +A + + + D G P+ + + +I K + A+ +F M + ST
Sbjct: 251 DRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYM-IGNGCMPNEST 309
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGI 279
Y I+I+ + G I +A +L+E+ RG+
Sbjct: 310 YTILIEGLAYEGLIKEARDLLDELCSRGV 338
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 141/296 (47%), Gaps = 11/296 (3%)
Query: 71 AHNSITFNRMVDII---GKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKM 127
A + +T+N +++ I G+ + F + L G N ++ I L L +
Sbjct: 233 APDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEP--NTVSYNIVLKGLFTAERWEDA 290
Query: 128 VNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKG 186
M GC ++ N ++ LC+R LV A ++ ++ ++ PN ++Y L+
Sbjct: 291 EKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHA 350
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
+C + +A + LM G P I + ++ + + D A+++ ++ K +
Sbjct: 351 FCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPV 410
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
L +Y VID + K GK +A +L+EM +G++ D +T S+I GL R+ EA +
Sbjct: 411 -LISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTF 469
Query: 307 EEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+++ +P +LY+ ++ GL + R A +F MI GC P TY +L++G
Sbjct: 470 CKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEG 525
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 166/385 (43%), Gaps = 56/385 (14%)
Query: 73 NSITFNRMV-DIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNF 130
++ T+N ++ + G+ R + L++M RR + D T+ I L + K+ +
Sbjct: 165 DAYTYNTLIRGLCGRGRTSNALA-VLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKL 223
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCD 189
M+D GC + N V+ +CQ V +A + L + +PN ++Y ++KG
Sbjct: 224 LDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFT 283
Query: 190 VGDLIEASKIWNLMTDEG--------------------FEPSIDVVDKM----------- 218
+A K+ M +G EP+++V+++M
Sbjct: 284 AERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLS 343
Query: 219 ----IETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEM 274
+ F K K +AM+ ++M V R + +Y ++ +C+ G++ A +L ++
Sbjct: 344 YNPLLHAFCKQKKIHKAMEFVELM-VSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQL 402
Query: 275 FKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRA 330
+G ++ +++I GL G+ +EA ++++E+ +PDI Y + GL R R
Sbjct: 403 KDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRI 462
Query: 331 REATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG------------RKGPDPLVNFDTIF 378
EA + F ++ G PT Y +L G +R G P + TI
Sbjct: 463 EEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTIL 522
Query: 379 VGGLVKAGKSLDAAKYVERVMNRGV 403
V GL G +A + ++ +RGV
Sbjct: 523 VEGLAYEGLVKEARELFAQLCSRGV 547
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 129/293 (44%), Gaps = 28/293 (9%)
Query: 150 VKTLCQRKLVVEAKYLILKLSEWIKPNEIAYG---WLIKGYCDVGDLIEASKIWNLMTDE 206
++ L +R + +A L+ L+ P+ A G LIK C G +A ++
Sbjct: 74 LRVLVRRGELDDALRLVDSLAGLNPPSPAAVGPCAALIKKLCASGRTADARRVL-----A 128
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQ 266
P + V + M+ + + D A ++ M V+ TY +I +C RG+ S
Sbjct: 129 ASGPDVMVYNAMVAGYCGAGQLDAARRLVADMPVEP----DAYTYNTLIRGLCGRGRTSN 184
Query: 267 AYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIK 322
A +LE+MF+RG D +T + ++ R ++A K+++E+ PDI Y+ ++
Sbjct: 185 ALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLN 244
Query: 323 GLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG------------HLGKRGRKGPDP 370
G+ + R +A + + + GCEP +Y ++L+G + + KG P
Sbjct: 245 GICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPP 304
Query: 371 LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGV 423
V + + L + G A + +E++ G YN LH + ++ +
Sbjct: 305 NVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKI 357
>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
Length = 837
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 186/387 (48%), Gaps = 32/387 (8%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHIM 134
++ ++ + K N +L E L+EM R V ++ TF ++ + + + M
Sbjct: 257 AYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEM 316
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDL 193
+CG +L + ++K C + + A L K++E + PN++ Y LI+G C+ G++
Sbjct: 317 INCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNI 376
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS---T 250
+AS+++ M G PS+ V+ ++ + K +EA K+F D G++ T
Sbjct: 377 EKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFD-----EAVDCGVANIFT 431
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI- 309
Y I++ W+CK GK+ +A ++L+ M +G+ + ++ + +I G +G + A V ++
Sbjct: 432 YNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDML 491
Query: 310 ---EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR- 365
KP++ Y LI G + + +A +F +M+ PT T+ ++ G L K G+
Sbjct: 492 ARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIING-LCKVGQM 550
Query: 366 -KGPDPLVNF------------DTIFVGGLVKAGKSLDAAKYVERVMNR-GVEVPRFDYN 411
+ D L NF ++I V G +K G ++D+A V R M GV Y
Sbjct: 551 SEARDKLKNFLEEGFIPSCMTYNSI-VDGFIKEG-NIDSALAVYREMCEFGVSPNVVTYT 608
Query: 412 KFLHYYSNEEGVVMFEEVGKKLREVGL 438
++ + + + + ++RE GL
Sbjct: 609 SLINGFCKSNRIDLALKTRDEMREKGL 635
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 100/196 (51%), Gaps = 8/196 (4%)
Query: 179 AYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
AY LI G+C D+ A ++ + + G P+ V + MI F +N + A+ ++ M
Sbjct: 641 AYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKM 700
Query: 239 RVKRMD-DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
R+ DLG TY +ID + K G++ A + EM +GI D +T ++ GL +G
Sbjct: 701 INDRIPCDLG--TYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKG 758
Query: 298 RLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYI 353
+L A K++EE+++ P + +Y+ LI G R +EA + EM+ RG P TY
Sbjct: 759 QLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYD 818
Query: 354 MLLQGHL-GKRGRKGP 368
+L+ G G R P
Sbjct: 819 ILINGKFKGDRSLSRP 834
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 158/354 (44%), Gaps = 24/354 (6%)
Query: 73 NSITFNRMVDIIGKSR--NIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVN 129
N +++N M I+G R N+D+ +M R L N T+ I + + + +K ++
Sbjct: 463 NVVSYNDM--ILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALD 520
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYC 188
F M + N ++ LC+ + EA+ + L E P+ + Y ++ G+
Sbjct: 521 LFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFI 580
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
G++ A ++ M + G P++ +I F K N+ D A+K MR K ++ L +
Sbjct: 581 KEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLE-LDV 639
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY----K 304
+ Y +ID CKR + A + E+ + G+ + + +S+I G + A K
Sbjct: 640 TAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKK 699
Query: 305 VVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK-- 362
++ + D+ Y LI GLL+ R A+ ++ EM+ +G P + T+ +L+ G K
Sbjct: 700 MINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQ 759
Query: 363 ----------RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
RK P V + G + G +A + +++RG+ VP
Sbjct: 760 LENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGL-VP 812
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 137/323 (42%), Gaps = 55/323 (17%)
Query: 136 DCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLI 194
DCG ++ N ++ LC+ + EA L+ + ++ + PN ++Y +I G+C G++
Sbjct: 423 DCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMD 481
Query: 195 EASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM---------------- 238
AS +++ M +P++ +I+ FK ++A+ +F M
Sbjct: 482 MASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTII 541
Query: 239 ----RVKRMDDL--------------GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIE 280
+V +M + TY ++D K G I A + EM + G+
Sbjct: 542 NGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVS 601
Query: 281 ADNLTLSSIIYGLLARGRLREAYKVVEEIEKP----DISLYHGLIKGLLRLRRAREATQV 336
+ +T +S+I G R+ A K +E+ + D++ Y LI G + R A +
Sbjct: 602 PNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDL 661
Query: 337 FREMIKRGCEPTMHTYIMLLQGHLGKRGRKG-------------PDPLVNFDTIFVGGLV 383
F E+++ G P Y ++ G + P L + T+ + GL+
Sbjct: 662 FFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTL-IDGLL 720
Query: 384 KAGKSLDAAKYVERVMNRGVEVP 406
K G+ + A+ ++++G+ VP
Sbjct: 721 KEGRLVFASDLYMEMLSKGI-VP 742
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 5/168 (2%)
Query: 195 EASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIV 254
E ++N M G V M+ K + +EA + F+ + +R L Y I+
Sbjct: 203 ELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETK-ERGVKLDAGAYSII 261
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI---EK 311
I +CK+ + +LEEM +RG T +S+I +A+G + EA ++ EE+ K
Sbjct: 262 IQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGK 321
Query: 312 P-DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
P ++ + L+KG A +F ++ + G P TY +L++G
Sbjct: 322 PMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEG 369
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 77/178 (43%), Gaps = 7/178 (3%)
Query: 184 IKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM 243
+ G D ++ + N FE V + ++ + + N+ + A+ F M +
Sbjct: 122 VSGDSDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQ-- 179
Query: 244 DDLGLSTY-RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
D + Y I++ + +R I + + +M RGI D+ T+ ++ L GR+ EA
Sbjct: 180 DVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEA 239
Query: 303 YKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
+ E + K D Y +I+ + + + ++ EM +RG P+ T+ ++
Sbjct: 240 EEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVI 297
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 96/229 (41%), Gaps = 58/229 (25%)
Query: 76 TFNRMVDIIGKSRNI----DLFWETLQ-EMGRRRLVNDKTFKIALMTLAEVRELKKM--- 127
++ ++D K R++ DLF+E L+ + R+V + ++ R+L M
Sbjct: 641 AYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSM-------ISGFRDLNNMEAA 693
Query: 128 -VNFFHIMND---CGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWL 183
V + ++ND C +++ ++K + +LV + + LS+ I P+ I + L
Sbjct: 694 LVWYKKMINDRIPCDLGTYTTLIDGLLK---EGRLVFASDLYMEMLSKGIVPDIITFHVL 750
Query: 184 IKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM 243
+ G C+ G L A KI M + PS+ + + +I +F
Sbjct: 751 VNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYF-------------------- 790
Query: 244 DDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
+ G + +A+T+ +EM RG+ D++T +I G
Sbjct: 791 ----------------REGNLKEAFTLHDEMLDRGLVPDDVTYDILING 823
>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
Length = 609
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 138/290 (47%), Gaps = 7/290 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHI 133
+T+N +++ I K +D + L M N T I L ++
Sbjct: 118 VTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSD 177
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGD 192
M GC S+ N ++ LC++ L+ A ++ K+ PN ++Y L+ G+C
Sbjct: 178 MLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKK 237
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ A + ++M G P I + ++ K K D A+++ + K + L TY
Sbjct: 238 MDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPV-LITYN 296
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
VID + K GK +A +L+EM ++G++ D +T SS++ GL G++ EA K ++E
Sbjct: 297 TVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGL 356
Query: 311 --KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+P+ Y+ ++ GL + R+ A MI + C+PT TY +L++G
Sbjct: 357 GIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEG 406
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 140/292 (47%), Gaps = 20/292 (6%)
Query: 141 YSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKI 199
+SL + V+T C+ V +A L+ ++ ++ KP+ + Y LI G C G L EA K
Sbjct: 80 FSLSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKF 139
Query: 200 WNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMC 259
N M G +P++ + ++ + + +A K+ M +++ + T+ I+I+++C
Sbjct: 140 LNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDM-LRKGCSPSVVTFNILINFLC 198
Query: 260 KRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDIS 315
++G + +A +LE+M G ++L+ + +++G ++ A + ++ + PDI
Sbjct: 199 RQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIV 258
Query: 316 LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG----------- 364
Y+ L+ L + + A ++ ++ +GC P + TY ++ G L K G
Sbjct: 259 TYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDG-LSKVGKTERAIKLLDE 317
Query: 365 --RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
RKG P + + V GL + GK +A K+ + G+ YN +
Sbjct: 318 MRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIM 369
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 96/210 (45%), Gaps = 16/210 (7%)
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
LS + + CK + QA +L+EM +G + D +T + +I G+ GRL EA K
Sbjct: 80 FSLSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKF 139
Query: 306 VEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL----- 356
+ + +P++ ++ +++ + R +A ++ +M+++GC P++ T+ +L+
Sbjct: 140 LNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCR 199
Query: 357 QGHLG-------KRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFD 409
QG LG K G P + G K K A +Y++ +++RG
Sbjct: 200 QGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVT 259
Query: 410 YNKFLHYYSNEEGVVMFEEVGKKLREVGLA 439
YN L + V + E+ +L G +
Sbjct: 260 YNTLLTALCKDGKVDVAVEILNQLSSKGCS 289
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 106/241 (43%), Gaps = 11/241 (4%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHI 133
+TFN +++ + + + + L++M N ++ L + +++ + + + I
Sbjct: 188 VTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDI 247
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGD 192
M GC + N ++ LC+ V A ++ +LS + P I Y +I G VG
Sbjct: 248 MVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGK 307
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS--- 249
A K+ + M +G +P I ++ + K DEA+K F ++ LG+
Sbjct: 308 TERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFH-----DLEGLGIRPNA 362
Query: 250 -TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY ++ +CK + +A L M + + T + +I G+ G +EA ++ E
Sbjct: 363 ITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNE 422
Query: 309 I 309
+
Sbjct: 423 L 423
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 3/209 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFF 131
NS+++N ++ K + +D E L M R D T+ L L + ++ V
Sbjct: 221 NSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEIL 280
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDV 190
+ ++ GC L N V+ L + A L+ ++ + +KP+ I Y L+ G
Sbjct: 281 NQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSRE 340
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G + EA K ++ + G P+ + ++ K + D A+ M KR +T
Sbjct: 341 GKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTE-AT 399
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGI 279
Y I+I+ + G +A +L E+ RG+
Sbjct: 400 YTILIEGIAYEGLAKEALDLLNELCSRGL 428
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 144/299 (48%), Gaps = 8/299 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N I++N +++ + + ++ WE L+EMG + D+ T+ L + + +
Sbjct: 283 NLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIH 342
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDV 190
M G S+ ++ ++C+ + + A ++ ++PNE Y LI G+
Sbjct: 343 AEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQ 402
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G L EA +I N MT+ GF PS+ + I + + +EA+ V Q M K + + +
Sbjct: 403 GLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAP-DVVS 461
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI- 309
Y +I C++G++ +A+ M +EM ++G+ D +T SS+I GL RL EA + +E+
Sbjct: 462 YSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEML 521
Query: 310 ---EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
PD Y LI +A + EMI +G P TY +L+ G L K+ R
Sbjct: 522 DMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLING-LNKQAR 579
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 134/308 (43%), Gaps = 48/308 (15%)
Query: 64 QKAQPCFAH--------NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIAL 115
QK CF N +T+N ++D K ID + L+ M +
Sbjct: 231 QKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSK------------ 278
Query: 116 MTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIK 174
G + +L N ++ LC+ + EA ++ ++ +
Sbjct: 279 ----------------------GMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFT 316
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+E+ Y L+ GYC G+ +A I M G PS+ +I + K + AM+
Sbjct: 317 PDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEF 376
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
F MR++ + TY +ID ++G +++AY +L EM + G +T ++ I+G
Sbjct: 377 FDQMRIRGLRP-NERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHC 435
Query: 295 ARGRLREAYKVVEE-IEK---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
R+ EA VV+E +EK PD+ Y +I G R A Q+ +EM+++G P
Sbjct: 436 VLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAV 495
Query: 351 TYIMLLQG 358
TY L+QG
Sbjct: 496 TYSSLIQG 503
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 147/334 (44%), Gaps = 32/334 (9%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHI 133
+T+ +++ + K+RN++ E +M R L N++T+ + + L + +
Sbjct: 355 VTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNE 414
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M + G S+ N + C + + EA ++ ++ E + P+ ++Y +I G+C G+
Sbjct: 415 MTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGE 474
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS--- 249
L A ++ M ++G P +I+ ++ + EA + Q M D+GL
Sbjct: 475 LDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQ-----EMLDMGLPPDE 529
Query: 250 -TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA----YK 304
TY +I+ C G +++A + +EM +G D +T S +I GL + R REA +K
Sbjct: 530 FTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFK 589
Query: 305 VVEEIEKPDISLYH---------------GLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
++ E P Y LIKG EA +VF M++R +P
Sbjct: 590 LIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGE 649
Query: 350 HTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLV 383
Y +++ GH RG P + + G V
Sbjct: 650 AVYNVIIHGHC--RGGNLPKAFNLYKEMIHSGFV 681
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 129/312 (41%), Gaps = 53/312 (16%)
Query: 144 EMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLM 203
+L+ +V++ KL E Y + + + PN Y LI+G+C VG+L + + M
Sbjct: 182 SVLDAIVRSRGSVKLSAEEVYREM-IRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEM 240
Query: 204 TDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGK 263
G P++ TY +ID CK G+
Sbjct: 241 ERNGCLPNV------------------------------------VTYNTLIDAYCKMGR 264
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHG 319
I +A+ +L+ M +G++ + ++ + II GL G ++EA++++EE+ PD Y+
Sbjct: 265 IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 324
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR------------KG 367
L+ G + +A + EM++ G P++ TY L+ R +G
Sbjct: 325 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 384
Query: 368 PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFE 427
P T + G + G +A + + + G YN F+H + E +
Sbjct: 385 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEAL 444
Query: 428 EVGKKLREVGLA 439
V +++ E GLA
Sbjct: 445 GVVQEMVEKGLA 456
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 66/133 (49%), Gaps = 4/133 (3%)
Query: 149 VVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEG 207
++K C + L+ EA + + E KP E Y +I G+C G+L +A ++ M G
Sbjct: 620 LIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSG 679
Query: 208 FEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQ 266
F P V +I+ FK ++E +V +R R+++ L+ +++++ K G +
Sbjct: 680 FVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAELA--KVLVEINHKEGNMEA 737
Query: 267 AYTMLEEMFKRGI 279
+L +M K G+
Sbjct: 738 VLNVLTDMAKDGL 750
>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
Length = 479
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 156/334 (46%), Gaps = 29/334 (8%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
TF L L + + ++ FH M C+ ++ ++ LC+ VVEA L+ ++
Sbjct: 52 TFNTLLHGLCVEDRVSEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRM 107
Query: 170 SE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD-EGFEPSIDVVDKMIETFFKINK 227
E ++PN+I YG ++ G C +GD + A + M + +P + + +I+ +K +
Sbjct: 108 VEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGR 167
Query: 228 DDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLS 287
+A +F M+ K + + TY +I+ C GK S+A +L+EM R I D +T S
Sbjct: 168 HTDAQNLFIEMQDKGIFP-DIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFS 226
Query: 288 SIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
+I L+ G L A +++E+ P++ + L+ GL + ++A ++F+ M K
Sbjct: 227 GLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKS 286
Query: 344 GCE-PTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
+ H + G +P V I + GL+ GK L+A + E + +RG
Sbjct: 287 MMDIDATHAF-------------NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 333
Query: 403 VEVPRFDYNKFLHYYSNE----EGVVMFEEVGKK 432
+ Y+ ++ + E MF+ +G K
Sbjct: 334 IVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSK 367
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 112/245 (45%), Gaps = 15/245 (6%)
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGY 187
N F M D G + + ++ C EA+ L+ + L I P+ + + LI
Sbjct: 173 NLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINAL 232
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD--- 244
GDL A + M G P++ + +++ K +A+++F+ M+ MD
Sbjct: 233 VKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDA 292
Query: 245 -------DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
+ + TY I+I + GK +A + EEM RGI D +T SS+I GL +
Sbjct: 293 THAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQS 352
Query: 298 RLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYI 353
RL EA ++ + + P+I ++ LI G + + ++F EM +RG TYI
Sbjct: 353 RLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYI 412
Query: 354 MLLQG 358
L++G
Sbjct: 413 TLIRG 417
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 122/260 (46%), Gaps = 17/260 (6%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHI 133
+TF+ +++ + K +++ + LQEM + N T L L + +LK + F
Sbjct: 223 VTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKA 282
Query: 134 MNDC-----------GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYG 181
M G E ++ N ++ L +EA+ L ++ I P+ + Y
Sbjct: 283 MQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYS 342
Query: 182 WLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK 241
+I G C L EA+++++ M + F P+I + +I + K D+ +++F M +
Sbjct: 343 SMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMG-R 401
Query: 242 RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
R TY +I K G I+ + + +EM G+ D +T+ +++ GL ++ L+
Sbjct: 402 RGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKR 461
Query: 302 AYKVVEEIEKPDISLYHGLI 321
A ++EE++ +S+ H L+
Sbjct: 462 ALAMLEELQ---MSMDHHLV 478
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
++ I+I C K+ A + ++ K G +T +++++GL R+ EA + ++
Sbjct: 17 SFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM 76
Query: 310 EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG----- 364
KP++ + L+ GL R R EA + M++ G +P TY ++ G + K G
Sbjct: 77 CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDG-MCKMGDTVSA 135
Query: 365 ----RKGPD-----PLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
RK + P V + + GL K G+ DA + ++G+
Sbjct: 136 LNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGI 183
>gi|449437410|ref|XP_004136485.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
gi|449519964|ref|XP_004167004.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
Length = 534
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 131/307 (42%), Gaps = 42/307 (13%)
Query: 51 LSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDK 109
+ + P FF + + F H+ +N M+D+ GK + L W + M R + +
Sbjct: 126 IPFLPALAFFNWATAGE-GFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARNVEITVV 184
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
TF + + + V+ F+ M D GC + + V+ LC+++ VEA+ L
Sbjct: 185 TFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSFFDNL 244
Query: 170 SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD 229
+P+ I Y L+ G+C GD+ EA ++ M G P++
Sbjct: 245 KHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNV----------------- 287
Query: 230 EAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSI 289
TY IVID +C+ G+I++A+ + EM G +++T +++
Sbjct: 288 -------------------YTYSIVIDALCRSGQITRAHDVFAEMLDAGCNPNSVTFNNL 328
Query: 290 IYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGC 345
I L GR + +V ++++ D+ Y+ LI+ + EA +V M K C
Sbjct: 329 IRVHLRAGRTEKVLQVYNQMKRLRCAADLITYNFLIETHCKDDNLGEAIKVLNSMAKNDC 388
Query: 346 EPTMHTY 352
P ++
Sbjct: 389 TPNASSF 395
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 15/173 (8%)
Query: 201 NLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST----YRIVID 256
+LM E ++ ++ + + EA+ F RM+D G + + VI
Sbjct: 172 DLMKARNVEITVVTFSMLVRRYVRAGLAAEAVHAFN-----RMEDYGCNADIIAFSNVIS 226
Query: 257 WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KP 312
+CK+ + +A + + + K E D + +S+++G G + EA V E++ P
Sbjct: 227 ILCKKRRAVEAQSFFDNL-KHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISP 285
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
++ Y +I L R + A VF EM+ GC P T+ L++ HL + GR
Sbjct: 286 NVYTYSIVIDALCRSGQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHL-RAGR 337
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 103/252 (40%), Gaps = 23/252 (9%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
N T+ I + L ++ + + F M D GC + N +++ L +
Sbjct: 286 NVYTYSIVIDALCRSGQITRAHDVFAEMLDAGCNPNSVTFNNLIRV----HLRAGRTEKV 341
Query: 167 LKLSEWIK-----PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIET 221
L++ +K + I Y +LI+ +C +L EA K+ N M P+ + +
Sbjct: 342 LQVYNQMKRLRCAADLITYNFLIETHCKDDNLGEAIKVLNSMAKNDCTPNASSFNPIFRC 401
Query: 222 FFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKR 277
K + A ++F RM ++G TY I++ + + +EM +
Sbjct: 402 IAKSQDVNGAHRMF-----ARMKEVGCKPNTVTYNILMRMFAVPKSADMIFKLKKEMDEE 456
Query: 278 GIEADNLTLSSIIYGLLARGRLREAYK-----VVEEIEKPDISLYHGLIKGLLRLRRARE 332
+E + T +I G AY + E+ KP + LY +++ L + + ++
Sbjct: 457 EVEPNFNTYRELIALYCGMGHWNHAYMFFREMIDEKCIKPSMPLYKMVLEELRKAGQLKK 516
Query: 333 ATQVFREMIKRG 344
++ +M++RG
Sbjct: 517 HEELVDKMVERG 528
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 166/371 (44%), Gaps = 24/371 (6%)
Query: 70 FAHNSITFNRMVDII-----GKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRE 123
FA +++N ++D + R+ D ++M R + N T+ + + + +
Sbjct: 163 FAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGD 222
Query: 124 LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGW 182
L+K + F M G ++ N ++ C++K V EA L+ ++ + N I+Y
Sbjct: 223 LEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNS 282
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
+I G C G + E ++ M +G P + ++ F K + + + M K
Sbjct: 283 VINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKG 342
Query: 243 MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
+ + TY +I+ MCK G +S+A + ++M RG+ + T +++I G +G + EA
Sbjct: 343 LSP-NVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEA 401
Query: 303 YKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
YKV+ E+ P + Y+ L+ G L R +EA + R M++RG P + +Y ++ G
Sbjct: 402 YKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAG 461
Query: 359 -----HLGKRGR-------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
LGK + KG P + + GL K ++A +M RG+
Sbjct: 462 FCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPD 521
Query: 407 RFDYNKFLHYY 417
Y ++ Y
Sbjct: 522 EVTYTSLINAY 532
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 133/295 (45%), Gaps = 15/295 (5%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALMTLAEVRELKKMVNFF 131
+ +T+N +V+ K N+ L EM G+ N T+ + + + L + V F
Sbjct: 311 DEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIF 370
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDV 190
M G + ++ CQ+ L+ EA K L + P+ + Y L+ GYC +
Sbjct: 371 DQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFL 430
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL-- 248
G + EA I M + G P + +I F + + E K FQM + M + G+
Sbjct: 431 GRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCR---ERELGKAFQMK--EEMVEKGVLP 485
Query: 249 --STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
TY +I +C + K+ +A+ + EM +RG+ D +T +S+I G L +A ++
Sbjct: 486 DTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLH 545
Query: 307 EEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
+E+ + PD Y LI GL + R + A ++ ++ P TY L++
Sbjct: 546 DEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIE 600
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 125/301 (41%), Gaps = 31/301 (10%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMV 128
F+ + +T+N +V + L+ M R L D ++ + REL K
Sbjct: 413 FSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAF 472
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGY 187
M + G + +++ LC ++ +VEA L ++ + P+E+ Y LI Y
Sbjct: 473 QMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAY 532
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEA----MKVFQMMRVKRM 243
C G+L +A ++ + M GF P +I K + A +K+F V
Sbjct: 533 CVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVP-- 590
Query: 244 DDLGLSTYRIVID---------------WMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
DD+ TY +I+ C +G +++A + + M +R + + +
Sbjct: 591 DDV---TYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNL 647
Query: 289 IIYGLLARGRLREAYKVVEEIEKPDISLYH----GLIKGLLRLRRAREATQVFREMIKRG 344
+I+G G + +AY + E+E + + L+K L R E +++ + ++ R
Sbjct: 648 MIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNIL-RS 706
Query: 345 C 345
C
Sbjct: 707 C 707
>gi|242038757|ref|XP_002466773.1| hypothetical protein SORBIDRAFT_01g013990 [Sorghum bicolor]
gi|241920627|gb|EER93771.1| hypothetical protein SORBIDRAFT_01g013990 [Sorghum bicolor]
Length = 487
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/422 (22%), Positives = 190/422 (45%), Gaps = 23/422 (5%)
Query: 10 RVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYT--QKAQ 67
R+C ++ + + S + L +T E ++ + Y FF++ QK
Sbjct: 41 RLCKLIISCRKA--SAVEHELDHSGVRVTPEVAERVLERLDNAGMLAYRFFEWARRQKRG 98
Query: 68 PCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKM 127
C AH +++ +V + K R L W+ + M + + N +TF I + A ++ +
Sbjct: 99 GC-AHTVRSYHTVVASLAKIRQYQLMWDVVAVMRKEGVANVETFSIIMRKYARAQKFDEA 157
Query: 128 VNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGY 187
V F+IM G ++L N ++ LC+ K V +A+ + K++ P+ Y L++G+
Sbjct: 158 VYTFNIMERYGVAHNLAAFNSLLGALCKSKNVRKAQEIFDKMNNRFSPDAKTYSILLEGW 217
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
+L + ++++ M G +P I M++ K + +EA+ V Q M +
Sbjct: 218 GRAPNLPKMREVYSDMLAAGCQPDIVTYGIMVDALCKTGRVEEAVCVVQDMSSRGCQPTT 277
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
Y +++ +I A +M K GI D + ++++ + A++V++
Sbjct: 278 F-IYSVLVHTYGVDMRIEDAVATFLDMEKDGIVPDVVVYNALVTAFCKVKKFDNAFRVMD 336
Query: 308 EIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG----- 358
++E P+ ++ ++ L+ L + EA +VFR MIKR C+P TY M+++
Sbjct: 337 DMEGHGISPNSRTWNIILNTLISLGKDDEAYRVFRNMIKR-CKPDSDTYTMMIKMFCEND 395
Query: 359 ------HLGKRGR-KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
+ K R K P ++ ++ + GL G+ A +E ++ +G+ P +
Sbjct: 396 KIEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFG 455
Query: 412 KF 413
K
Sbjct: 456 KL 457
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 112/297 (37%), Gaps = 69/297 (23%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNF 130
AHN FN ++ + KS+N+ E +M R + KT+ I L L KM
Sbjct: 170 AHNLAAFNSLLGALCKSKNVRKAQEIFDKMNNRFSPDAKTYSILLEGWGRAPNLPKMREV 229
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-------------------- 170
+ M GC+ + +V LC+ V EA ++ +S
Sbjct: 230 YSDMLAAGCQPDIVTYGIMVDALCKTGRVEEAVCVVQDMSSRGCQPTTFIYSVLVHTYGV 289
Query: 171 ----------------EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDV 214
+ I P+ + Y L+ +C V A ++ + M G P+
Sbjct: 290 DMRIEDAVATFLDMEKDGIVPDVVVYNALVTAFCKVKKFDNAFRVMDDMEGHGISPNSRT 349
Query: 215 VDKMIETFFKINKDDEAMKVFQMM--RVKRMDDL-------------------------- 246
+ ++ T + KDDEA +VF+ M R K D
Sbjct: 350 WNIILNTLISLGKDDEAYRVFRNMIKRCKPDSDTYTMMIKMFCENDKIEMALKVWKYMRL 409
Query: 247 -----GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR 298
+ T+ ++I+ +C +G++SQA +LE+M ++GI T + LL GR
Sbjct: 410 KQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKEGR 466
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 79/191 (41%), Gaps = 30/191 (15%)
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
+ T+ I++ + K +A M + G+ + +S++ L +R+A ++ +
Sbjct: 138 VETFSIIMRKYARAQKFDEAVYTFNIMERYGVAHNLAAFNSLLGALCKSKNVRKAQEIFD 197
Query: 308 EIE---KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
++ PD Y L++G R + +V+ +M+ GC+P + TY
Sbjct: 198 KMNNRFSPDAKTYSILLEGWGRAPNLPKMREVYSDMLAAGCQPDIVTY------------ 245
Query: 365 RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN----E 420
I V L K G+ +A V+ + +RG + F Y+ +H Y E
Sbjct: 246 -----------GIMVDALCKTGRVEEAVCVVQDMSSRGCQPTTFIYSVLVHTYGVDMRIE 294
Query: 421 EGVVMFEEVGK 431
+ V F ++ K
Sbjct: 295 DAVATFLDMEK 305
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 171/389 (43%), Gaps = 23/389 (5%)
Query: 71 AHNSITFNRMVDIIGKSRNID---LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKM 127
A + IT+ +VD + KS I L E + E G N T+ + ++ + +
Sbjct: 233 APSVITYTILVDALCKSARISDASLILEDMIEAGCAP--NVVTYNTLINGFCKLGNMDEA 290
Query: 128 VNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKG 186
V F+ M + C + N ++ C+++ + L+ ++ ++ +PN I Y L+
Sbjct: 291 VVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDS 350
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
G I+A + +M +PS + MI+ F K+ + D A ++FQ+M R
Sbjct: 351 LVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLM-TDRGCLP 409
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
+ TY I+I C+ +I A +LE M + G D +T +SI+ GL ++ EAY+V
Sbjct: 410 DIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVY 469
Query: 307 EEIEKP----DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG---- 358
E + D+ LI GL + RR +A ++ REM + G P + Y +L+ G
Sbjct: 470 EVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKA 529
Query: 359 --------HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY 410
+ KG P V +I + L K+ + D ++ ++ RGV Y
Sbjct: 530 DQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVY 589
Query: 411 NKFLHYYSNEEGVVMFEEVGKKLREVGLA 439
+ + E+ K +++ G A
Sbjct: 590 TSVIDGLCKSDSYDEAYELYKLMKQTGCA 618
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 173/389 (44%), Gaps = 31/389 (7%)
Query: 73 NSITFNRMVDIIGKS-RNIDLFWETLQEMGRRRLVNDKTFKIALMT--LAEVRELKKMVN 129
N IT+N ++D + KS + ID F L +M RR F LM +V +L
Sbjct: 340 NFITYNTLMDSLVKSGKYIDAF--NLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYE 397
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYC 188
F +M D GC + N ++ C+ + +A+ L+ +++E P+ + Y ++ G C
Sbjct: 398 LFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLC 457
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLG 247
+ EA +++ ++ + G+ + +I+ K + D+A K+ +M R D+
Sbjct: 458 KASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDV- 516
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY---- 303
Y I+I CK ++ ++ EM +G +T S +I L R+R+
Sbjct: 517 -VAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLK 575
Query: 304 KVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
++E PD +Y +I GL + EA ++++ M + GC PT+ TY +L+ L K
Sbjct: 576 TMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVD-KLCKV 634
Query: 364 GRKG---------------PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRF 408
R PD V ++++F G K+ + A + + + +RG F
Sbjct: 635 SRLDEAIHLLEVMESDGCLPD-TVTYNSVF-DGFWKSAEHDKAFRLFQAMKSRGCSPTPF 692
Query: 409 DYNKFLHYYSNEEGVVMFEEVGKKLREVG 437
Y+ L EE + E+ ++ E G
Sbjct: 693 MYSLLLTKLVAEEKMDQAMEIWEEALEAG 721
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 157/362 (43%), Gaps = 21/362 (5%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMT 117
FF + QP + H+ T N ++ + + ++ + D T+ +
Sbjct: 118 FFDWCT-GQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLING 176
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNE 177
+ R+ ++ M G + N ++K LC V A + P+
Sbjct: 177 FCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRNCAPSV 236
Query: 178 IAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQM 237
I Y L+ C + +AS I M + G P++ + +I F K+ DEA+ +F
Sbjct: 237 ITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQ 296
Query: 238 MRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
M ++ + TY I+ID CK+ + +L+EM K G E + +T ++++ L+ G
Sbjct: 297 M-LENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSG 355
Query: 298 RLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYI 353
+ +A+ + + + KP ++ +I ++ + A ++F+ M RGC P ++TY
Sbjct: 356 KYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYN 415
Query: 354 MLLQGH------------LGKRGRKG-PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMN 400
+++ G L + G P +V +++I V GL KA + +A + E + N
Sbjct: 416 IMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSI-VSGLCKASQVDEAYEVYEVLRN 474
Query: 401 RG 402
G
Sbjct: 475 GG 476
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 106/239 (44%), Gaps = 17/239 (7%)
Query: 192 DLIEASKIWNLMTDE-GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
DL +A K ++ T + G++ S + ++ F + K EA +F+ R + T
Sbjct: 111 DLDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSI-T 169
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA---YKVVE 307
Y +I+ CK QAY +L+EM KRGI N ++II GL GR+ A Y+ ++
Sbjct: 170 YSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQ 229
Query: 308 EIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG--HLGKRG- 364
P + Y L+ L + R +A+ + +MI+ GC P + TY L+ G LG
Sbjct: 230 RNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDE 289
Query: 365 ---------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
P V I + G K + D AK ++ ++ G E YN +
Sbjct: 290 AVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLM 348
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 118/278 (42%), Gaps = 42/278 (15%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+T + ++D + KSR +D + L+EM R D + I + + +L K + FF
Sbjct: 482 VTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSE 541
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M D GC ++ + V+ LC+ V + L+ + E + P+ I Y +I G C
Sbjct: 542 MLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDS 601
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
EA +++ LM G P++ TY
Sbjct: 602 YDEAYELYKLMKQTGCAPTV------------------------------------VTYN 625
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
+++D +CK ++ +A +LE M G D +T +S+ G +A+++ + ++
Sbjct: 626 VLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSR 685
Query: 311 --KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
P +Y L+ L+ + +A +++ E ++ G +
Sbjct: 686 GCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGAD 723
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 139/294 (47%), Gaps = 7/294 (2%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVN 129
A + +T+N +V+ I + +D E L+ + N ++ I L L +
Sbjct: 219 APDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEK 278
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYC 188
M+ G ++ N ++ LC+R LV A ++ ++ ++ PN ++Y ++ +C
Sbjct: 279 LMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFC 338
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
+ A LM G P I + ++ + + D A+++ ++ K + L
Sbjct: 339 KQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPV-L 397
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
+Y VID + K GK +A +L EM +G++ D +T S+I GL GR+ EA K +
Sbjct: 398 ISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCK 457
Query: 309 IE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
++ +P+ LY+ ++ GL + R A +F M+ GC P TY +L++G
Sbjct: 458 VQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEG 511
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 124/278 (44%), Gaps = 37/278 (13%)
Query: 149 VVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGF 208
++K LC EA+ ++ +P+ ++Y ++ GYC G L A ++ M
Sbjct: 96 LIKKLCASGRTAEARRVLAS----CEPDVMSYNAMVAGYCVTGQLDNARRLVAAMP---M 148
Query: 209 EPSIDVVDKMIETFFKINKDDEAMKVFQ-MMRVKRMDDLGLSTYRIVIDWMCKRGKISQA 267
EP + +I + D A+ V M+R + D+ TY I+++ CKR QA
Sbjct: 149 EPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDV--VTYTILLEATCKRSGYKQA 206
Query: 268 YTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKG 323
+L+EM +G D +T + ++ G+ GR+ +A + ++ + +P+ Y+ ++KG
Sbjct: 207 VKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKG 266
Query: 324 LLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLV 383
L R +A ++ EM ++G P + T+ ML+ L +RG P
Sbjct: 267 LCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLIS-FLCRRGLVEP--------------- 310
Query: 384 KAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEE 421
A + ++++ G YN LH + ++
Sbjct: 311 -------AMEILDQIPKYGCTPNSLSYNPILHAFCKQK 341
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 94/214 (43%), Gaps = 3/214 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFF 131
NS+++N ++ K + +D ++ M D ++ L L E+ V
Sbjct: 326 NSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELL 385
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
H + D GC L N V+ L + EA L+ ++ ++ ++P+ I Y + G C
Sbjct: 386 HQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCRE 445
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G + EA K + + D G P+ + + ++ K A+ +F M V ST
Sbjct: 446 GRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYM-VSNGCMPNEST 504
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNL 284
Y I+I+ + G + +A M+ E+ RG+ + L
Sbjct: 505 YTILIEGLAYEGLVKEAREMMAELCSRGVVSKTL 538
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 138/290 (47%), Gaps = 7/290 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHI 133
+T+N +V+ I + +D E L+ + N ++ I L L +
Sbjct: 229 VTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGE 288
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGD 192
M GC ++ N ++ LC++ LV A ++ ++ ++ PN ++Y L+ +C
Sbjct: 289 MGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKK 348
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ +A +LM G P I + ++ + + D A+++ ++ K + L +Y
Sbjct: 349 MDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPV-LISYN 407
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
VID + K GK +A +L EM +G++ D +T S+I GL R+ +A + +++
Sbjct: 408 TVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDM 467
Query: 311 --KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+P+ LY+ +I GL + R A +F MI GC P TY +L++G
Sbjct: 468 GIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEG 517
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 116/252 (46%), Gaps = 33/252 (13%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+ +AY ++ GYC G L A + L+ + EP + +I + A+ V
Sbjct: 124 PDVMAYNAMVAGYCGAGQLDAARR---LVAEMPVEPDAYTYNTLIRGLCGRGRTANALAV 180
Query: 235 F-QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
+M+R + + D+ TY I+++ CKR QA +L+EM +G D +T + ++ G+
Sbjct: 181 LDEMLRRRCVPDV--VTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGI 238
Query: 294 LARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
GR+ +A + ++ + +P+ Y+ ++KGL R +A ++ EM ++GC P +
Sbjct: 239 CQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNV 298
Query: 350 HTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFD 409
T+ ML+ L ++G P A + +E++ G
Sbjct: 299 VTFNMLIS-FLCRKGLVEP----------------------ALEVLEQIPKYGCTPNSLS 335
Query: 410 YNKFLHYYSNEE 421
YN LH + ++
Sbjct: 336 YNPLLHAFCKQK 347
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 140/337 (41%), Gaps = 58/337 (17%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEAS 197
C + N +V C + A+ L+ ++ ++P+ Y LI+G C G A
Sbjct: 121 ACGPDVMAYNAMVAGYCGAGQLDAARRLVAEMP--VEPDAYTYNTLIRGLCGRGRTANAL 178
Query: 198 KIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDW 257
+ + M P + ++E K + +AMK+ MR K + TY +V++
Sbjct: 179 AVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTP-DIVTYNVVVNG 237
Query: 258 MCKRGKISQAYTMLE-----------------------------------EMFKRGIEAD 282
+C+ G++ A L+ EM ++G +
Sbjct: 238 ICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPN 297
Query: 283 NLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFR 338
+T + +I L +G + A +V+E+I K P+ Y+ L+ + ++ +A
Sbjct: 298 VVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLD 357
Query: 339 EMIKRGCEPTMHTYIMLLQGHLGKRGR-------------KGPDP-LVNFDTIFVGGLVK 384
M+ RGC P + +Y LL L + G KG P L++++T+ + GL K
Sbjct: 358 LMVSRGCYPDIVSYNTLLTA-LCRSGEVDVAVELLHQLKDKGCAPVLISYNTV-IDGLTK 415
Query: 385 AGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEE 421
AGK+ +A + + ++++G++ Y+ E+
Sbjct: 416 AGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCRED 452
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 93/209 (44%), Gaps = 3/209 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFF 131
NS+++N ++ K + +D L M R D ++ L L E+ V
Sbjct: 332 NSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELL 391
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
H + D GC L N V+ L + EA L+ ++ S+ ++P+ I Y + G C
Sbjct: 392 HQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCRE 451
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
+ +A + + + D G P+ + + +I K + A+ +F M + ST
Sbjct: 452 DRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYM-IGNGCMPNEST 510
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGI 279
Y I+I+ + G I +A +L+E+ RG+
Sbjct: 511 YTILIEGLAYEGLIKEARDLLDELCSRGV 539
>gi|242062032|ref|XP_002452305.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
gi|241932136|gb|EES05281.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
Length = 347
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 139/296 (46%), Gaps = 11/296 (3%)
Query: 71 AHNSITFNRMVDIIGKSRNID---LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKM 127
A + IT+N +++ I + +D F E L G N ++ I L L +
Sbjct: 13 APDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEP--NTVSYNIVLKGLFTAERWEDA 70
Query: 128 VNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKG 186
M GC ++ N ++ LC+R LV A ++ ++ ++ PN ++Y L+
Sbjct: 71 EKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNPLLHA 130
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
+C + +A LM G P I + ++ + + D A+ + ++ K +
Sbjct: 131 FCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPV 190
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
L +Y VID + K GK +A +L+EM +G++ D +T ++I GL ++ EA +
Sbjct: 191 -LISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTF 249
Query: 307 EEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+++ +P + LY+ ++ GL + R A +F MI GC P TY +L++G
Sbjct: 250 CKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTILVEG 305
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 108/230 (46%), Gaps = 6/230 (2%)
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGD 192
M D GC + N V+ +CQ V +A + L + +PN ++Y ++KG
Sbjct: 7 MRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLFTAER 66
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+A K+ M +G P++ + +I + + AM+V + + LS Y
Sbjct: 67 WEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLS-YN 125
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
++ CK+ K+ +A +E M RG D ++ ++++ L G + A ++ +++
Sbjct: 126 PLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGK 185
Query: 311 --KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
P + Y+ +I GL + + +EA ++ EMI +G +P + TY + G
Sbjct: 186 GCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASG 235
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 142/316 (44%), Gaps = 18/316 (5%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T+ + L + + + + F + G E + N V+K L + +A+ L+ ++
Sbjct: 18 TYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLFTAERWEDAEKLMEEM 77
Query: 170 S-EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
+ + PN + + LI C G + A ++ + G P+ + ++ F K K
Sbjct: 78 AHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKM 137
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
D+AM ++M V R + +Y ++ +C+ G++ A +L ++ +G ++ ++
Sbjct: 138 DKAMAFVELM-VSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVLISYNT 196
Query: 289 IIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+I GL G+ +EA ++++E+ +PDI Y + GL R + EA + F ++ G
Sbjct: 197 VIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFCKVQDMG 256
Query: 345 CEPTMHTYIMLLQGHLGKRG------------RKGPDPLVNFDTIFVGGLVKAGKSLDAA 392
PT+ Y +L G +R G P + TI V GL G +A
Sbjct: 257 IRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTILVEGLAYEGLVKEAR 316
Query: 393 KYVERVMNRGVEVPRF 408
+ ++ +RGV +F
Sbjct: 317 DLLGQLCSRGVVNKKF 332
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 70/156 (44%), Gaps = 27/156 (17%)
Query: 270 MLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLL 325
+L+EM +G D +T + ++ G+ GR+ +A + +E + +P+ Y+ ++KGL
Sbjct: 3 LLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLF 62
Query: 326 RLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKA 385
R +A ++ EM +GC P + T+ ML+ L +RG P
Sbjct: 63 TAERWEDAEKLMEEMAHKGCPPNVVTFNMLIS-FLCRRGLVEP----------------- 104
Query: 386 GKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEE 421
A + +E++ G YN LH + ++
Sbjct: 105 -----AMEVLEQIPKYGCTPNSLSYNPLLHAFCKQK 135
>gi|224107985|ref|XP_002314678.1| predicted protein [Populus trichocarpa]
gi|222863718|gb|EEF00849.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 156/348 (44%), Gaps = 7/348 (2%)
Query: 15 LYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNS 74
+ +++YS E+ + +L+ + T+E QI F + F + K Q + H
Sbjct: 64 ILKKRYSSEAAVVKALNESGIDATNELVSQILMRFDSHCVVAFGVFIWA-KNQTSYVHTP 122
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALMTLAEVRELKKMVNFFHI 133
++ M+DI+GK + L W +++M G V+ T + LA+ R+ K ++ F
Sbjct: 123 ELYDYMIDILGKFKKFSLMWSLVEQMKGLNGYVSLATASKVMRRLAKARKYKDAIDVFRG 182
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDL 193
+ G E LN ++ L + V +A L+ + I + ++ LI GYC
Sbjct: 183 IEKYGASKDREALNVLMDALVKEGDVEDAHSAFLEFKDCITLDSSSFNILIHGYCKARMF 242
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
+ A KI M GF P + I + + VF M+ K + TY
Sbjct: 243 VVARKIMEEMEKHGFHPDVVSYSCFIAAYCEQKDFRNVEAVFDEMQEKGCKP-NVITYTT 301
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPD 313
V+ + K ++++A + E+M + G D+ SS+IY L GR+++A+ V E++EK
Sbjct: 302 VMHALGKARQLNEALEVYEKMKRNGCLPDSKFYSSLIYVLSQSGRIKDAWDVFEDMEKQG 361
Query: 314 IS----LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
+ +Y+ +I + A ++ M C+P + TY LL+
Sbjct: 362 VCRNLWVYNTMISSACAHSQGGSALKLLERMEGDSCKPDVKTYAPLLK 409
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 102/240 (42%), Gaps = 11/240 (4%)
Query: 69 CFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKM 127
C +S +FN ++ K+R + + ++EM + D ++ + E ++ + +
Sbjct: 221 CITLDSSSFNILIHGYCKARMFVVARKIMEEMEKHGFHPDVVSYSCFIAAYCEQKDFRNV 280
Query: 128 VNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIK-----PNEIAYGW 182
F M + GC+ ++ V+ L + + + EA L++ E +K P+ Y
Sbjct: 281 EAVFDEMQEKGCKPNVITYTTVMHALGKARQLNEA----LEVYEKMKRNGCLPDSKFYSS 336
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
LI G + +A ++ M +G ++ V + MI + ++ A+K+ + M
Sbjct: 337 LIYVLSQSGRIKDAWDVFEDMEKQGVCRNLWVYNTMISSACAHSQGGSALKLLERMEGDS 396
Query: 243 MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
+ TY ++ C+R I +L MFK + D T + ++ G+L A
Sbjct: 397 CKP-DVKTYAPLLKMCCRRKSIKLLKFLLSHMFKNNVSVDLGTYTLLVNEFCRNGKLEHA 455
Score = 38.1 bits (87), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 83/209 (39%), Gaps = 38/209 (18%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALM-TLAEVRELKKMVNFF 131
N IT+ ++ +GK+R ++ E ++M R + D F +L+ L++ +K + F
Sbjct: 295 NVITYTTVMHALGKARQLNEALEVYEKMKRNGCLPDSKFYSSLIYVLSQSGRIKDAWDVF 354
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
M G +L + N ++ + C A L+ ++ + KP+ Y L+K C
Sbjct: 355 EDMEKQGVCRNLWVYNTMISSACAHSQGGSALKLLERMEGDSCKPDVKTYAPLLKMCCR- 413
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
SI ++ ++ FK N + L T
Sbjct: 414 ------------------RKSIKLLKFLLSHMFKNNVS-----------------VDLGT 438
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGI 279
Y ++++ C+ GK+ A +E +G+
Sbjct: 439 YTLLVNEFCRNGKLEHACFYFQEAVLKGM 467
>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
Length = 479
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 156/334 (46%), Gaps = 29/334 (8%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
TF L L + + ++ FH M C+ ++ ++ LC+ VVEA L+ ++
Sbjct: 52 TFNTLLHGLCVEDRVSEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRM 107
Query: 170 SE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD-EGFEPSIDVVDKMIETFFKINK 227
E ++PN+I YG ++ G C +GD + A + M + +P + + +I+ +K +
Sbjct: 108 VEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGR 167
Query: 228 DDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLS 287
+A +F M+ K + + TY +I+ C GK S+A +L+EM R I D +T S
Sbjct: 168 HTDAQNLFIEMQDKGIFP-DIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFS 226
Query: 288 SIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
+I L+ G L A +++E+ P++ + L+ GL + ++A ++F+ M K
Sbjct: 227 GLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKS 286
Query: 344 GCE-PTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
+ H + G +P V I + GL+ GK L+A + E + +RG
Sbjct: 287 MMDIDATHAF-------------NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 333
Query: 403 VEVPRFDYNKFLHYYSNE----EGVVMFEEVGKK 432
+ Y+ ++ + E MF+ +G K
Sbjct: 334 IVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSK 367
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 112/245 (45%), Gaps = 15/245 (6%)
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGY 187
N F M D G + + ++ C EA+ L+ + L I P+ + + LI
Sbjct: 173 NLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINAL 232
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD--- 244
GDL A + M G P++ + +++ K +A+++F+ M+ MD
Sbjct: 233 VKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDA 292
Query: 245 -------DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
+ + TY I+I + GK +A + EEM RGI D +T SS+I GL +
Sbjct: 293 THAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQS 352
Query: 298 RLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYI 353
RL EA ++ + + P+I ++ LI G + + ++F EM +RG TYI
Sbjct: 353 RLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYI 412
Query: 354 MLLQG 358
L++G
Sbjct: 413 TLIRG 417
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 123/260 (47%), Gaps = 17/260 (6%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHI 133
+TF+ +++ + K +++ + LQEM + N T L L + +LK + F
Sbjct: 223 VTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKA 282
Query: 134 MNDC-----------GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYG 181
M G E ++ N ++ L +EA+ L ++ I P+ + Y
Sbjct: 283 MQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYS 342
Query: 182 WLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK 241
+I G C L EA+++++ M + F P+I + +I + K D+ +++F M +
Sbjct: 343 SMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMG-R 401
Query: 242 RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
R TY +I K G I+ + + +EM G+ D +T+ +++ GL ++ L++
Sbjct: 402 RGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKK 461
Query: 302 AYKVVEEIEKPDISLYHGLI 321
A ++EE++ +S+ H L+
Sbjct: 462 ALAMLEELQ---MSMDHHLV 478
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
++ I+I C K+ A + ++ K G +T +++++GL R+ EA + ++
Sbjct: 17 SFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM 76
Query: 310 EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG----- 364
KP++ + L+ GL R R EA + M++ G +P TY ++ G + K G
Sbjct: 77 CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDG-MCKMGDTVSA 135
Query: 365 ----RKGPD-----PLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
RK + P V + + GL K G+ DA + ++G+
Sbjct: 136 LNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGI 183
>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
Length = 595
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 157/348 (45%), Gaps = 24/348 (6%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
N ++ + L R + V M G + +++ LC + A L+
Sbjct: 122 NAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELL 181
Query: 167 LKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI 225
++ ++PN + Y L++GYC G + K++ M+ G +P + + +I+ K
Sbjct: 182 DEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKE 241
Query: 226 NKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
K +A KV MM V+R + + TY ++I+ +CK G + +A T+ +EM +G+ D +T
Sbjct: 242 GKTGKAAKVKDMM-VQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVT 300
Query: 286 LSSIIYGLLARGRLREAYKVVEE------IEKPDISLYHGLIKGLLRLRRAREATQVFRE 339
+++I GL + EA +EE + +PD+ ++ +I GL ++ R +A +V
Sbjct: 301 YNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREM 360
Query: 340 MIKRGCEPTMHTYIMLLQGHLGKRGRK------------GPDPLVNFDTIFVGGLVKAGK 387
M +RGC + TY L+ G L K G +P +I + G K +
Sbjct: 361 MAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWE 420
Query: 388 SLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN----EEGVVMFEEVGK 431
A K++ + RG++ F Y L E + +F E+ K
Sbjct: 421 VDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDK 468
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 120/264 (45%), Gaps = 21/264 (7%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
N T+ + + +L + +++ + M+D G + N ++ L + EA +
Sbjct: 262 NVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFL 321
Query: 167 LKLSEW---IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFF 223
++ + ++P+ + + +I G C +G + +A K+ +M + G ++ + +I F
Sbjct: 322 EEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFL 381
Query: 224 KINKDDEAMKVFQMMRVKRMDDLGLS-------TYRIVIDWMCKRGKISQAYTMLEEMFK 276
+++K AM + MD+L +S TY I+I+ K ++ +A L M +
Sbjct: 382 RVHKVKMAMNL--------MDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQ 433
Query: 277 RGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP---DISLYHGLIKGLLRLRRAREA 333
RGI+A+ ++ + +G + A + E++K D Y +I G + +
Sbjct: 434 RGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDKNCGLDAIAYSTMIHGACKSGDMKTV 493
Query: 334 TQVFREMIKRGCEPTMHTYIMLLQ 357
Q+ ++M+ G P TY ML+
Sbjct: 494 KQLIQDMLDEGLAPDAVTYSMLIN 517
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 21/211 (9%)
Query: 250 TYRIVIDWMCKRG--KISQAYTMLEEMFKRGIEA---DNLTLSSIIYGLLARGRLREAYK 304
+Y V+ +C+RG + QA ++L +M + A + ++ ++++ GL A R EA
Sbjct: 85 SYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGEAVA 144
Query: 305 VVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH- 359
++ ++ + D+ Y LI+GL A ++ EM G +P + Y LL+G+
Sbjct: 145 LLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLRGYC 204
Query: 360 -------LGK----RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRF 408
+GK R+G P V T + L K GK+ AAK + ++ RG+E
Sbjct: 205 RSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVV 264
Query: 409 DYNKFLHYYSNEEGVVMFEEVGKKLREVGLA 439
YN ++ E V + K++ + G+A
Sbjct: 265 TYNVLINSLCKEGSVREALTLRKEMDDKGVA 295
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 114/261 (43%), Gaps = 10/261 (3%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK---TFKIALMTLAEVRELKKM 127
A + +T+N ++ + +D L+EM + V + TF + L ++ + +
Sbjct: 295 APDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQA 354
Query: 128 VNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKG 186
V +M + GC +L N ++ + V A L+ +L+ ++P+ Y LI G
Sbjct: 355 VKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILING 414
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
+ + ++ A K M G + + ++ + + AM +F M + L
Sbjct: 415 FSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEM--DKNCGL 472
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
Y +I CK G + ++++M G+ D +T S +I G L EA +V+
Sbjct: 473 DAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVL 532
Query: 307 EEIEK----PDISLYHGLIKG 323
+++ PD++++ LIKG
Sbjct: 533 KQMTASGFVPDVAVFDSLIKG 553
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 81/172 (47%), Gaps = 5/172 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRE--LKKMVNF 130
+S T++ +++ K +D + L M R+R + + F + A ++ +++ +
Sbjct: 404 DSFTYSILINGFSKMWEVDRAEKFLCTM-RQRGIKAELFHYIPLLAAMCQQGMMERAMGL 462
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCD 189
F+ M D C + ++ C+ + K LI L E + P+ + Y LI Y
Sbjct: 463 FNEM-DKNCGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAK 521
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK 241
+GDL EA ++ MT GF P + V D +I+ + + D+ +K+ MR K
Sbjct: 522 LGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAK 573
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 144/299 (48%), Gaps = 8/299 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N I++N +++ + + ++ WE L+EMG + D+ T+ L + + +
Sbjct: 79 NLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIH 138
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDV 190
M G S+ ++ ++C+ + + A ++ ++PNE Y LI G+
Sbjct: 139 AEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQ 198
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G L EA +I N MT+ GF PS+ + I + + +EA+ V Q M K + + +
Sbjct: 199 GLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAP-DVVS 257
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y +I C++G++ +A+ M +EM ++G+ D +T SS+I GL RL EA + +E+
Sbjct: 258 YSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEML 317
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
PD Y LI +A + EMI +G P TY +L+ G L K+ R
Sbjct: 318 DMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLING-LNKQAR 375
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 153/332 (46%), Gaps = 20/332 (6%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
N T+ I + V EL+K + F M GC ++ N ++ C+ + EA L+
Sbjct: 9 NVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLL 68
Query: 167 LKLS-EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI 225
+S + ++PN I+Y +I G C G + EA +I M +GF P + ++ + K
Sbjct: 69 KSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKE 128
Query: 226 NKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
+A+ + M V+ + TY +I+ MCK +++A ++M RG+ + T
Sbjct: 129 GNFHQALVIHAEM-VRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERT 187
Query: 286 LSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMI 341
+++I G +G L EAY+++ E+ + P + Y+ I G L R EA V +EM+
Sbjct: 188 YTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMV 247
Query: 342 KRGCEPTMHTYIMLLQGHLGKRG-------------RKGPDPLVNFDTIFVGGLVKAGKS 388
++G P + +Y ++ G ++G KG P + + GL + +
Sbjct: 248 EKGLAPDVVSYSTIISGFC-RKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRL 306
Query: 389 LDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE 420
+A + +++ G+ F Y ++ Y E
Sbjct: 307 TEACDLSQEMLDMGLPPDEFTYTTLINAYCVE 338
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 134/308 (43%), Gaps = 48/308 (15%)
Query: 64 QKAQPCFAH--------NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIAL 115
QK CF N +T+N ++D K ID + L+ M +
Sbjct: 27 QKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSK------------ 74
Query: 116 MTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIK 174
G + +L N ++ LC+ + EA ++ ++ +
Sbjct: 75 ----------------------GMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFT 112
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+E+ Y L+ GYC G+ +A I M G PS+ +I + K + AM+
Sbjct: 113 PDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEF 172
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
F MR++ + TY +ID ++G +++AY +L EM + G +T ++ I+G
Sbjct: 173 FDQMRIRGLRP-NERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHC 231
Query: 295 ARGRLREAYKVVEE-IEK---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
R+ EA VV+E +EK PD+ Y +I G R A Q+ +EM+++G P
Sbjct: 232 VLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAV 291
Query: 351 TYIMLLQG 358
TY L+QG
Sbjct: 292 TYSSLIQG 299
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 95/190 (50%), Gaps = 5/190 (2%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
+ PN Y LI+G+C VG+L + + M G P++ + +I+ + K+ + DEA
Sbjct: 6 VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAF 65
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
+ + M K M L +Y ++I+ +C+ G + +A+ +LEEM +G D +T ++++ G
Sbjct: 66 GLLKSMSSKGMQP-NLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNG 124
Query: 293 LLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
G +A + E+ + P + Y LI + + R A + F +M RG P
Sbjct: 125 YCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPN 184
Query: 349 MHTYIMLLQG 358
TY L+ G
Sbjct: 185 ERTYTTLIDG 194
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 140/310 (45%), Gaps = 30/310 (9%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHI 133
+T+ +++ + K+RN++ E +M R L N++T+ + + L + +
Sbjct: 151 VTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNE 210
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M + G S+ N + C + + EA ++ ++ E + P+ ++Y +I G+C G+
Sbjct: 211 MTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGE 270
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS--- 249
L A ++ M ++G P +I+ ++ + EA + Q M D+GL
Sbjct: 271 LDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQ-----EMLDMGLPPDE 325
Query: 250 -TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA----YK 304
TY +I+ C G +++A + +EM +G D +T S +I GL + R REA +K
Sbjct: 326 FTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFK 385
Query: 305 VVEEIEKPDISLYH---------------GLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
++ E P Y LIKG EA +VF M++R +P
Sbjct: 386 LIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGE 445
Query: 350 HTYIMLLQGH 359
Y +++ GH
Sbjct: 446 AVYNVIIHGH 455
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 2/110 (1%)
Query: 149 VVKTLCQRKLVVEAKYLILKLSEWI-KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEG 207
++K C + L+ EA + + E KP E Y +I G+C G+L +A ++ M G
Sbjct: 416 LIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSG 475
Query: 208 FEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLSTYRIVID 256
F P V +I+ FK ++E +V +R R+++ L+ + I+
Sbjct: 476 FVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAELAKVLVEIN 525
>gi|449442339|ref|XP_004138939.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Cucumis sativus]
Length = 559
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 114/468 (24%), Positives = 201/468 (42%), Gaps = 49/468 (10%)
Query: 26 LHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIG 85
+ +L LT + I + + + FF + + Q ++H +N M+DI+
Sbjct: 103 MEGALDQVGVYLTTDLVADILHRLRFDEKLAFRFFTWAAR-QENYSHEPRVYNEMIDILS 161
Query: 86 KSR----NIDLFWETLQEMGRRRLVNDKT-------FKIA-------LMTLAEVRELKKM 127
+R + + L M R NDK F I L L + + KK+
Sbjct: 162 STRYKVKQFRIVCDLLDYMKR----NDKNTVPVEVLFGILRNYTDKYLTCLQKFAKKKKV 217
Query: 128 VNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGY 187
+ + + N ++ LC+ LV +A+ L+ K+ + +KP+ Y + G+
Sbjct: 218 I--------VKRQPEINAFNLLLDALCKCSLVEDAEALLKKVKKKLKPDANTYNIMFFGW 269
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK--RMDD 245
C V + ++ M + GF+P + I +F K EA ++F+ MR K +
Sbjct: 270 CRVRNPGRGMRVLEEMIELGFDPDNFTYNTAIASFCKAGMLKEACELFEFMRTKGSALSS 329
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
TY I+I + G++ + + LE M K G D T +I G+ G+++EAY
Sbjct: 330 PTAKTYAIMIVALVNNGRMEECFKFLEYMIKSGCLPDVSTYKEMIEGICVAGKVQEAYMF 389
Query: 306 VEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML------ 355
+EE+ K PDI Y+ +K L + + +A + MI+ GC P++ TY ML
Sbjct: 390 LEEMGKKGYPPDIVTYNCFLKVLCDNKMSDDALRHCDRMIEVGCLPSVQTYNMLISMFFE 449
Query: 356 LQGHLG------KRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFD 409
+ H G + R G V+ I + GL K DA +E V+N+G+++P
Sbjct: 450 MNDHNGAFQIWLEMDRYGCTRDVDSYCIMIEGLFGCNKVGDACLLLEEVVNKGMKLPFRK 509
Query: 410 YNKFLHYYSNEEGVVMFEEVGKKLREVGLADLADIFQRYGKKMATRER 457
++ FL S + + + +R+ +A F K+M+ R
Sbjct: 510 FDSFLMQLSVNGNLKGIHRLSEHMRKFYNRAMARRFSLNQKRMSVSLR 557
>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
Length = 426
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 161/356 (45%), Gaps = 54/356 (15%)
Query: 111 FKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS 170
F L +A+ + +++ FH M CG + L N V+ LC+ V A ++ K+
Sbjct: 13 FSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMM 72
Query: 171 EW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD 229
++ +P+ + LI G+C + +A + + M + GF P + + + +I+ KI +
Sbjct: 73 KFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVN 132
Query: 230 EAMKVF--------------------------------QMMRVKRMDDL--GLSTYRIVI 255
+A+++F ++MR M D+ + T+ VI
Sbjct: 133 DAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVI 192
Query: 256 DWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK---- 311
D K GK S+A + EEM +R ++ D T +S+I GL GR+ EA ++++ +
Sbjct: 193 DVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCL 252
Query: 312 PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPD-- 369
PD+ Y+ LI G + +R E T++FREM +RG TY ++QG+ + GR PD
Sbjct: 253 PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYF-QAGR--PDAA 309
Query: 370 ----------PLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
P + +I + GL + A E + +E+ YN +H
Sbjct: 310 QEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIH 365
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 131/282 (46%), Gaps = 12/282 (4%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
+++T+N +V + S +++M R +V N TF + + + + + +
Sbjct: 149 DAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLY 208
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDV 190
M + + N ++ LC V EAK ++ L +++ P+ + Y LI G+C
Sbjct: 209 EEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKS 268
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL-GLS 249
+ E +K++ M G + +I+ +F+ + D A ++F RMD +
Sbjct: 269 KRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFS-----RMDSRPNIR 323
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
TY I++ +C ++ +A + E M K IE D T + +I+G+ G + +A+ + +
Sbjct: 324 TYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSL 383
Query: 310 E----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
KPD+ Y +I G R R+ ++ ++R+M + G P
Sbjct: 384 SCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 101/205 (49%), Gaps = 12/205 (5%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
+ P+ Y LI G C G + EA ++ +LM +G P + + +I F K + DE
Sbjct: 216 VDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGT 275
Query: 233 KVFQMMRVKRMDDLGLS-TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNL-TLSSII 290
K+F+ M + + +G + TY +I + G+ A +E+F R N+ T S ++
Sbjct: 276 KLFREMAQRGL--VGDTITYNTIIQGYFQAGRPDAA----QEIFSRMDSRPNIRTYSILL 329
Query: 291 YGLLARGRLREAYKVVEEIEKP----DISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
YGL R+ +A + E ++K DI+ Y+ +I G+ ++ +A +FR + +G +
Sbjct: 330 YGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLK 389
Query: 347 PTMHTYIMLLQGHLGKRGRKGPDPL 371
P + +Y ++ G KR D L
Sbjct: 390 PDVVSYTTMISGFCRKRQWDKSDLL 414
>gi|357498925|ref|XP_003619751.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494766|gb|AES75969.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 562
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 144/292 (49%), Gaps = 18/292 (6%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFF 131
N + +N ++D + K + + ++ EM +R+ D T+ + V +LK + F
Sbjct: 240 NLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGFCIVGKLKDAIGLF 299
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKY-LILKLSEWIKPNEIAYGWLIKGYCDV 190
+ M + N +V C+ V EAK L + + + IKP+ + Y L+ YC V
Sbjct: 300 NKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMDRYCLV 359
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
++ +A I+N M+ G ++ MI F KI D+AMK+F+ M K++ + T
Sbjct: 360 NEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIFP-NVIT 418
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y +ID +CK G+IS A + +EM RG + D +TL+ ++ ++
Sbjct: 419 YSSLIDGLCKSGRISYALELNDEMHDRGQQPDIITLTR---------------QLKDQGI 463
Query: 311 KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
+P++ Y LI GL + R +A +F +++ +G T++TY +++ G K
Sbjct: 464 RPNMFTYTILIDGLCKGGRLEDARNIFEDLLVKGYNITVNTYTVMIHGFCNK 515
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 131/300 (43%), Gaps = 45/300 (15%)
Query: 142 SLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIW 200
+L M N ++ ++C+ KL +A L ++ S+ I P+ Y LI G+C VG L +A ++
Sbjct: 240 NLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGFCIVGKLKDAIGLF 299
Query: 201 NLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCK 260
N MT E P + + +++ F K + EA MM +K+ + TY ++D C
Sbjct: 300 NKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMM-MKQGIKPDVVTYNSLMDRYCL 358
Query: 261 RGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISL 316
++++A ++ M RG+ A+ + S +I + +A K+ +E+ P++
Sbjct: 359 VNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIFPNVIT 418
Query: 317 YHGLIKGLLRLRRAREATQVFREMIKRGCEP----------------TMHTYIMLLQGHL 360
Y LI GL + R A ++ EM RG +P M TY
Sbjct: 419 YSSLIDGLCKSGRISYALELNDEMHDRGQQPDIITLTRQLKDQGIRPNMFTY-------- 470
Query: 361 GKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE 420
TI + GL K G+ DA E ++ +G + Y +H + N+
Sbjct: 471 ---------------TILIDGLCKGGRLEDARNIFEDLLVKGYNITVNTYTVMIHGFCNK 515
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 122/296 (41%), Gaps = 43/296 (14%)
Query: 139 CEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDL-IEAS 197
CE E LNK+VKT R +V A+ K W E + C+V L +EA
Sbjct: 87 CENIFEDLNKLVKT---RNNIVHAENYEEK---WTALRERVDTVM----CEVQKLSLEAH 136
Query: 198 KIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVID- 256
K + + F+ +VV M E +IN++ E K+F +D + T I D
Sbjct: 137 KEYINTLNIWFK---NVVSNMKEV--EINREQEKHKLFISDSPFYLDASSIITANIHADL 191
Query: 257 ---WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPD 313
W+ K +T + K +++ +LS R L+ +V ++ +P+
Sbjct: 192 SLNWLAKL----TVHTDAPILAKLQSDSEQGSLSQ-------RAPLQLLRRVDGKLLQPN 240
Query: 314 ISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------------LG 361
+ +Y+ +I + + + +A ++ EM+ + P ++TY L+ G
Sbjct: 241 LVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGFCIVGKLKDAIGLFN 300
Query: 362 KRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
K + +P V I V K G+ +A + +M +G++ YN + Y
Sbjct: 301 KMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMDRY 356
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 177/380 (46%), Gaps = 24/380 (6%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHI 133
IT++ +++ + K N + + L++M + N + + +L + R + + ++FF
Sbjct: 46 ITYSTIINGLCKMGNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSE 105
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGD 192
M G + + ++ C V EA L ++ E + PN++ + LI G C
Sbjct: 106 MVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRM 165
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ EA ++ MT++G EP + + +++ + ++ DEA K+F +M K + +Y
Sbjct: 166 ISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAP-NVRSYN 224
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK- 311
I+I+ CK G+I +A +L EM + + D T S+++ G GR +EA ++++E+
Sbjct: 225 ILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSY 284
Query: 312 ---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG--HLGKRGR- 365
P++ Y ++ GL + EA ++ + M + EP + Y +L++G GK
Sbjct: 285 GLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAA 344
Query: 366 ---------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN----K 412
KG P V T+ + GL+K G S +A + + G YN
Sbjct: 345 RELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQG 404
Query: 413 FLHYYSNEEGVVMFEE-VGK 431
FL V + EE VGK
Sbjct: 405 FLRNGDTPNAVRLIEEMVGK 424
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 139/289 (48%), Gaps = 7/289 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N +TF ++D + K R I W + M + L D T+ + ++ + F
Sbjct: 149 NKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLF 208
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDV 190
+IM+ GC ++ N ++ C+ + EAK L+ ++S + + P+ Y L++G+C V
Sbjct: 209 NIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQV 268
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G EA ++ M G P++ +++ K DEA ++ + M+ +++ +
Sbjct: 269 GRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEP-NIFI 327
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y I+I+ MC GK+ A + +F +GI+ +T + +I GLL G EA ++ E+
Sbjct: 328 YTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMA 387
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
P+ Y+ +I+G LR A ++ EM+ +G T+ ML
Sbjct: 388 VNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRML 436
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 119/261 (45%), Gaps = 17/261 (6%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
++P + + L+ G C +++A K+++ M G EP + +I K+ A+
Sbjct: 6 LQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMAL 65
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
++ + M K + Y +ID +CK +++A EM K GI D T SSI++G
Sbjct: 66 QLLKKMEEKGCKP-NVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHG 124
Query: 293 LLARGRLREAY----KVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
GR+ EA ++VE P+ + LI GL + R EA VF M ++G EP
Sbjct: 125 FCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPD 184
Query: 349 MHTYIMLLQGHLGKR------------GRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVE 396
++TY L+ G+ + RKG P V I + G K+G+ +A +
Sbjct: 185 VYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLA 244
Query: 397 RVMNRGVEVPRFDYNKFLHYY 417
+ ++ + F Y+ + +
Sbjct: 245 EMSHKSLTPDIFTYSTLMRGF 265
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 123/254 (48%), Gaps = 6/254 (2%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
TF L L ++ V F M G E + + ++ LC+ A L+ K+
Sbjct: 12 TFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKKM 71
Query: 170 SE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
E KPN +AY +I C + EA ++ M EG P + ++ F + +
Sbjct: 72 EEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRV 131
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
+EA +F+ M V+R T+ I+ID +CK+ IS+A+ + E M ++G+E D T ++
Sbjct: 132 NEATSLFKQM-VERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNA 190
Query: 289 IIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
++ G +R ++ EA K+ +++ P++ Y+ LI G + R EA + EM +
Sbjct: 191 LVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKS 250
Query: 345 CEPTMHTYIMLLQG 358
P + TY L++G
Sbjct: 251 LTPDIFTYSTLMRG 264
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 3/218 (1%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVN 129
A N ++N +++ KS ID L EM + L D T+ + +V ++
Sbjct: 217 APNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQE 276
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYC 188
M G +L + V+ LC+ + EA L+ + E I+PN Y LI+G C
Sbjct: 277 LLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMC 336
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
G L A ++++ + +G +P++ MI K +EA ++F+ M V
Sbjct: 337 TFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLP-NS 395
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTL 286
TY ++I + G A ++EEM +G AD+ T
Sbjct: 396 CTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTF 433
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 163/375 (43%), Gaps = 19/375 (5%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMT 117
+ Y + + N +T+N ++ + K++ +D E L M + ++ D T+ +
Sbjct: 108 YSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHG 167
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPN 176
+ K+ + F M G E + N ++ LC+ EA+ + +++ +KP
Sbjct: 168 FCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPE 227
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
YG L++GY G L+E + +LM G P+ V ++ + K K +EAM VF
Sbjct: 228 ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFS 287
Query: 237 MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR 296
MR + ++ + TY VI +CK G++ A E+M G+ N+ +S+I+GL
Sbjct: 288 KMRQQGLNPNAV-TYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTC 346
Query: 297 GRLREAYKVVEEIEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
+ A +++ E+ I L ++ +I + R E+ ++F M++ G +P + TY
Sbjct: 347 NKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITY 406
Query: 353 IMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMN 400
L+ G+ L G P + + G K + DA + +
Sbjct: 407 STLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMES 466
Query: 401 RGVEVPRFDYNKFLH 415
GV YN L
Sbjct: 467 SGVSPDIITYNIILQ 481
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 164/361 (45%), Gaps = 22/361 (6%)
Query: 44 QICNNFPLSWRP----VYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQE 99
I + F S +P V+L + +P + +T+N ++D + K+ +
Sbjct: 163 SIVHGFCSSGQPKEAIVFLKKMRSDGVEP----DVVTYNSLMDYLCKNGRCTEARKIFDS 218
Query: 100 MGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKL 158
M +R L + T+ L A L +M +M G + + + +V +++
Sbjct: 219 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEK 278
Query: 159 VVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDK 217
V EA + K+ + + PN + YG +I C G + +A + M DEG P V +
Sbjct: 279 VEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNS 338
Query: 218 MIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKR 277
+I NK + A ++ M + R L + +ID CK G++ ++ + + M +
Sbjct: 339 LIHGLCTCNKWERAEELILEM-LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 397
Query: 278 GIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREA 333
G++ D +T S++I G G++ EA K++ + KPD Y LI G ++ R ++A
Sbjct: 398 GVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDA 457
Query: 334 TQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAK 393
+FREM G P + TY ++LQG R L +V G+ K+G+ L+ +
Sbjct: 458 LVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKEL------YV-GITKSGRQLELST 510
Query: 394 Y 394
Y
Sbjct: 511 Y 511
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 128/294 (43%), Gaps = 54/294 (18%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVV--DKMIETFFKINKDDEAM 232
P+ +Y L+ G CD EA ++ ++M D+G + DVV +I FFK D+
Sbjct: 49 PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKTY 108
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
+ M +R+ + TY +I +CK + +A +L M K G+ D +T +SI++G
Sbjct: 109 STYNEMLDQRISP-NVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHG 167
Query: 293 LLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
+ G+ +EA ++++ +PD+ Y+ L+ L + R EA ++F M KRG +P
Sbjct: 168 FCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPE 227
Query: 349 MHTYIMLLQGHLGKRG-------------------------------------------- 364
+ TY LLQG+ K
Sbjct: 228 ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFS 287
Query: 365 ---RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
++G +P +G L K+G+ DA Y E++++ G+ YN +H
Sbjct: 288 KMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIH 341
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 121/258 (46%), Gaps = 8/258 (3%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAK-YL 165
N F I + A+ ++++ + F M G + V+ LC+ V +A Y
Sbjct: 262 NHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYF 321
Query: 166 ILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI 225
+ E + P I Y LI G C A ++ M D G + + +I++ K
Sbjct: 322 EQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKE 381
Query: 226 NKDDEAMKVFQMM-RVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNL 284
+ E+ K+F +M R+ D+ TY +ID C GK+ +A +L M G++ D +
Sbjct: 382 GRVIESEKLFDLMVRIGVKPDI--ITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCV 439
Query: 285 TLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREM 340
T S++I G R+++A + E+E PDI Y+ +++GL + RR A +++ +
Sbjct: 440 TYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI 499
Query: 341 IKRGCEPTMHTYIMLLQG 358
K G + + TY ++L G
Sbjct: 500 TKSGRQLELSTYNIILHG 517
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/350 (20%), Positives = 140/350 (40%), Gaps = 49/350 (14%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNID---LFWETLQEMGRRRLVNDKTFKIALMTL 118
+++ Q N++T+ ++ I+ KS ++ L++E + + G + + + L
Sbjct: 286 FSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSP--GNIVYNSLIHGL 343
Query: 119 AEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNE 177
+ ++ M D G + N ++ + C+ V+E++ L L + +KP+
Sbjct: 344 CTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDI 403
Query: 178 IAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQM 237
I Y LI GYC G + EA+K+ M G +P +I + KI++ +A+ +F+
Sbjct: 404 ITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFRE 463
Query: 238 MR----------------------------------VKRMDDLGLSTYRIVIDWMCKRGK 263
M K L LSTY I++ +CK
Sbjct: 464 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKL 523
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHG 319
A M + + ++ + T + +I LL GR EA + P+ Y
Sbjct: 524 TDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRL 583
Query: 320 LIKGLLRLRRAREATQVFREMIKRGC--EPTMHTYI---MLLQGHLGKRG 364
+ + ++ E Q+F M GC + M +I +L +G + + G
Sbjct: 584 MAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAG 633
>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
Length = 969
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 132/273 (48%), Gaps = 30/273 (10%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLC-----QRKLVVEAK- 163
T+ L + +++ + + FH M D GC + + +V LC Q+ V AK
Sbjct: 527 TYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKM 586
Query: 164 -----------YLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSI 212
Y + ++ I PN + YG LI G C +++A ++ ++M+ G EP+
Sbjct: 587 IGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNH 646
Query: 213 DVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG----LSTYRIVIDWMCKRGKISQAY 268
+ D +I+ F K+ K D A +VF RM G + TY +ID M K ++ A
Sbjct: 647 IIYDALIDGFCKVGKLDNAQEVF-----FRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAI 701
Query: 269 TMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGL 324
+L +M + + +T +++I GL G ++A K++ +EK P++ Y LI GL
Sbjct: 702 KVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGL 761
Query: 325 LRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
+ + + Q+F +MI +GC P TY +L+
Sbjct: 762 GKSGKVDMSLQLFTQMITQGCAPNYVTYRVLIN 794
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 149/318 (46%), Gaps = 24/318 (7%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMV 128
F ++ T+++++ + ++ ++ + QEM ++ D T+ I + + +V +++
Sbjct: 451 FVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQAR 510
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGY 187
++F M GC S+ ++ + K V +A + ++ + PN I Y L+ G
Sbjct: 511 SWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGL 570
Query: 188 CDVGDLIEASKIW--------NLMTDEGFE--------PSIDVVDKMIETFFKINKDDEA 231
C G+ +A +++ N+ +D FE P++ +I+ K +K +A
Sbjct: 571 CKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDA 630
Query: 232 MKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
++ +M + + Y +ID CK GK+ A + M K G T +S+I
Sbjct: 631 QELLDVMSSNGCEPNHI-IYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLID 689
Query: 292 GLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
+ RL A KV+ ++ + P++ Y +I GL R+ ++A ++ M KRGC P
Sbjct: 690 AMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNP 749
Query: 348 TMHTYIMLLQGHLGKRGR 365
+ TY L+ G LGK G+
Sbjct: 750 NVVTYTSLIDG-LGKSGK 766
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/370 (21%), Positives = 154/370 (41%), Gaps = 22/370 (5%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
N F + + R+ + M CGC + N + ++C + + L
Sbjct: 343 NPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLA 402
Query: 167 LK-------LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMI 219
L L+ N++ + C +G +A +I LM +GF P K+I
Sbjct: 403 LAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVI 462
Query: 220 ETFFKINKDDEAMKVFQMMR-VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRG 278
+ K ++A +FQ M+ V + D + TY I+ID CK G I QA + +EM G
Sbjct: 463 TFLCEAMKVEKAFLLFQEMKSVGVIPD--VYTYTILIDSFCKVGLIEQARSWFDEMESVG 520
Query: 279 IEADNLTLSSIIYGLLARGRLREA----YKVVEEIEKPDISLYHGLIKGLLRLRRAREAT 334
+T +++++ L ++ +A +++V+ P+ Y L+ GL + +++A
Sbjct: 521 CSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKAC 580
Query: 335 QVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKY 394
+V+ +MI Y G+ +V + + + GL KA K +DA +
Sbjct: 581 EVYAKMIGTSDNVGSDFYFE------GEHTDSIAPNVVTYGAL-IDGLCKAHKVVDAQEL 633
Query: 395 VERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLADIFQRYGKKMAT 454
++ + + G E Y+ + + + +EV ++ + G + M
Sbjct: 634 LDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAM-F 692
Query: 455 RERRRNRAIE 464
++RR + AI+
Sbjct: 693 KDRRLDLAIK 702
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/375 (21%), Positives = 156/375 (41%), Gaps = 66/375 (17%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVN 129
A N +T+ ++D + K+ + E L M + AL+ +V +L
Sbjct: 608 APNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQE 667
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQ-RKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYC 188
F M+ CG ++ ++ + + R+L + K L L PN + Y +I G C
Sbjct: 668 VFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLC 727
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
+G+ +A K+ ++M G P++ +I+ K K D ++++F M + +
Sbjct: 728 RIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQM-ITQGCAPNY 786
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEM-------FKRG---------------------IE 280
TYR++I+ C G + +A+++L EM + +G +E
Sbjct: 787 VTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKKFIASLGLLEELE 846
Query: 281 ADNLTLSSIIYGLL-----ARGRLREAYKVVEEIEKPDISL-------YHGLIKGLLRLR 328
+ + + +YGLL GRL +A ++ +E+ + SL Y LI+ L
Sbjct: 847 SHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLAS 906
Query: 329 RAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKS 388
+ +A +++ E+ ++G P + +I L++G L+K K
Sbjct: 907 QLEKAFELYSEITRKGVVPELSAFICLIKG-----------------------LIKVNKW 943
Query: 389 LDAAKYVERVMNRGV 403
+A + + + GV
Sbjct: 944 NEALQLCYSMCDEGV 958
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 86/440 (19%), Positives = 168/440 (38%), Gaps = 67/440 (15%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
+ T+N +V ++ + +D+ + +EM DK F + A +E +
Sbjct: 206 SGATYNALVQVLATAGQMDMGFRVQKEMSELGFCTDK-FTVGCFAQALCKEGRWSDALVM 264
Query: 133 IMNDCGCEYSLE--MLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCD 189
I + ++ L+ + +++ L + L EA + ++ PN + Y L+ G+
Sbjct: 265 IERE---DFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLK 321
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM----------- 238
L +I ++M +EG P+ + + ++ ++ A K+ M
Sbjct: 322 KKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVV 381
Query: 239 ------------RVKRMDDLGLS--------TYRIVID---------WMCKRGKISQAYT 269
+ D L L+ V++ +C GK +A+
Sbjct: 382 YNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQ 441
Query: 270 MLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLL 325
+++ M ++G D T S +I L ++ +A+ + +E++ PD+ Y LI
Sbjct: 442 IIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFC 501
Query: 326 RLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG------------RKGPDPLVN 373
++ +A F EM GC P++ TY LL +L + G P
Sbjct: 502 KVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTI 561
Query: 374 FDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMF----EEV 429
+ V GL KAG+S A + +++ V Y + H S VV + + +
Sbjct: 562 TYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGL 621
Query: 430 GKKLREVGLADLADIFQRYG 449
K + V +L D+ G
Sbjct: 622 CKAHKVVDAQELLDVMSSNG 641
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 54/127 (42%), Gaps = 5/127 (3%)
Query: 242 RMDDLGL----STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
R+ D G +TY ++ + G++ + + +EM + G D T+ L G
Sbjct: 197 RLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSELGFCTDKFTVGCFAQALCKEG 256
Query: 298 RLREAYKVVE-EIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
R +A ++E E K D L +I GL+ EA M C P + TY LL
Sbjct: 257 RWSDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLL 316
Query: 357 QGHLGKR 363
G L K+
Sbjct: 317 AGFLKKK 323
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 150/335 (44%), Gaps = 19/335 (5%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
N T+ I + L L++ V M GC + N +V C+ + A+ ++
Sbjct: 151 NVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVV 210
Query: 167 LKLSEW--IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFK 224
+ E KPN + + ++ G C G + A K+++ M EG P + + ++ + K
Sbjct: 211 SLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCK 270
Query: 225 INKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNL 284
+ E++ VF M +R + T+ +I CK G + QA ++ +M +RG+ + +
Sbjct: 271 VGCLHESLAVFSEM-TQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEV 329
Query: 285 TLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREM 340
T +++I G +G L +A VEE+ K P + Y+ LI G +L R A ++ REM
Sbjct: 330 TFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREM 389
Query: 341 IKRGCEPTMHTYIMLLQGHLG------------KRGRKGPDPLVNFDTIFVGGLVKAGKS 388
+ +P + TY ++ G+ K +KG P + + GL + +
Sbjct: 390 EAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRL 449
Query: 389 LDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGV 423
DA + E ++ GV+ F Y + + E V
Sbjct: 450 NDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNV 484
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 179/413 (43%), Gaps = 50/413 (12%)
Query: 58 LFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALM 116
+F + TQ+ + +TF ++ K+ N++ + +M R L +N+ TF +
Sbjct: 280 VFSEMTQRG---LVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALID 336
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKP 175
+ L + M CG + S+ N ++ C+ + A+ LI ++ ++ +KP
Sbjct: 337 GFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKP 396
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
+ + Y +I GYC VG+L A ++ M +G P +I + + ++A ++F
Sbjct: 397 DVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELF 456
Query: 236 QMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
+ M LG+ TY +ID CK G + +A ++ +EM ++G+ D +T S +I
Sbjct: 457 E-----NMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLIN 511
Query: 292 GLLARGRLREA----YKVVEEIEKPDISLYH---------------GLIKGLLRLRRARE 332
GL R +EA +K+ E PD Y L+KG +E
Sbjct: 512 GLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKE 571
Query: 333 ATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG--------------RKGPDPLVNFDTIF 378
A +V++ M+ R + Y +L+ GH RG R G P
Sbjct: 572 ADKVYQSMLDRNWKLDGSVYSILIHGHC--RGGNVRKALSFHKQMLRSGFSPNSTSTISL 629
Query: 379 VGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGK 431
V GL + G ++A ++ ++ + + +K L + +EG+ F+ G+
Sbjct: 630 VRGLFEEGMVVEADNAIQDLLT-CCPLADAEASKALIDLNRKEGMDYFQAQGE 681
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 98/221 (44%), Gaps = 4/221 (1%)
Query: 142 SLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWN 201
S+ N V+ L L ++L L + PN Y L++ C G L EA +
Sbjct: 117 SVPAYNAVLLALSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVG 176
Query: 202 LMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKR 261
M G P+ + ++ F + + D A +V +MR + L T+ +++ +CK
Sbjct: 177 DMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKA 236
Query: 262 GKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLY 317
G++ A + +EM + G+ D ++ ++++ G G L E+ V E+ + PD+ +
Sbjct: 237 GRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTF 296
Query: 318 HGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
LI + +A + +M +RG T+ L+ G
Sbjct: 297 TSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDG 337
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 168/365 (46%), Gaps = 34/365 (9%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHI 133
+T+N ++ + K++ +D E L M + ++ D T+ L + K+ + F
Sbjct: 232 VTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKK 291
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M G E + + ++ LC+ +EA+ + +++ +KP YG L++GY G
Sbjct: 292 MRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGA 351
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
L+E + +LM G P V +I + K K D+AM VF MR + ++ + TY
Sbjct: 352 LVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAV-TYG 410
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP 312
VI +CK G++ A E+M G+ N+ +S+I+GL + A +++ E+
Sbjct: 411 AVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDR 470
Query: 313 DISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGP 368
I L ++ +I + R E+ ++F M++ G +P + TY L+ G+
Sbjct: 471 GICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGY--------- 521
Query: 369 DPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN----EEGVV 424
AGK +A K + +++ G++ Y+ ++ Y E+ +V
Sbjct: 522 --------------CLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALV 567
Query: 425 MFEEV 429
+F+E+
Sbjct: 568 LFKEM 572
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 146/313 (46%), Gaps = 19/313 (6%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNID---LFWETLQEMGRRRLVNDKTFKIALMTL 118
+++ Q N++T+ ++ I+ KS ++ L++E + + G + + + L
Sbjct: 394 FSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSP--GNIVYNSLIHGL 451
Query: 119 AEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNE 177
+ ++ M D G + N ++ + C+ V+E++ L L + +KPN
Sbjct: 452 CTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNV 511
Query: 178 IAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQM 237
I Y LI GYC G + EA K+ + M G +P+ +I + KI++ ++A+ +F
Sbjct: 512 ITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLF-- 569
Query: 238 MRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
K M+ G+S TY I++ + + + + A + + + G + + T + I++GL
Sbjct: 570 ---KEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGL 626
Query: 294 LARGRLREAYKVVEEIEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
+A ++ + + D+ L ++ +I LL++ R EA +F G P
Sbjct: 627 CKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNY 686
Query: 350 HTYIMLLQGHLGK 362
TY ++ + +G+
Sbjct: 687 WTYRLMAENIIGQ 699
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 129/294 (43%), Gaps = 29/294 (9%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKI-WNLMTDEGFEPSIDVVDKMIETFFKINK 227
+ + + + IA+ L+KG C +A I MT+ G P++ + +++ N+
Sbjct: 114 IKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENR 173
Query: 228 DDEAMKVFQMMRVKRMDDLG------LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEA 281
EA+++ MM DD G + +Y VI+ K G +AY+ EM RGI
Sbjct: 174 SQEALELLHMM----ADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILP 229
Query: 282 DNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVF 337
D +T +SII L + +A +V+ + K PD Y+ ++ G + +EA
Sbjct: 230 DVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFL 289
Query: 338 REMIKRGCEPTMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVK 384
++M G EP + TY +L+ +L K GR +G P + + G
Sbjct: 290 KKMRSDGVEPDVVTYSLLMD-YLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYAT 348
Query: 385 AGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
G ++ ++ ++ G+ + ++ + Y+ + V V K+R+ GL
Sbjct: 349 KGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL 402
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 85/199 (42%), Gaps = 29/199 (14%)
Query: 225 INKDDEAMKVFQMMRVKRM--DDL--GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIE 280
+ +D A V + R+ R D++ L TY I+I C+ G++ + L + K+G
Sbjct: 60 VARDSPAAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFR 119
Query: 281 ADNLTLSSIIYGLLARGRLREAYKVV-----EEIEKPDISLYHGLIKGLLRLRRAREATQ 335
D + + ++ GL A R +A +V E P++ Y+ L+KGL R++EA +
Sbjct: 120 VDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALE 179
Query: 336 VFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYV 395
+ M RG P +V++ T+ + G K G S A
Sbjct: 180 LLHMMAD-------------------DRGGGSPPDVVSYTTV-INGFFKEGDSDKAYSTY 219
Query: 396 ERVMNRGVEVPRFDYNKFL 414
+++RG+ YN +
Sbjct: 220 HEMLDRGILPDVVTYNSII 238
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 156/333 (46%), Gaps = 43/333 (12%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N +T+N +V+ I KS + L + L++M R + D T+ + +L + ++ F
Sbjct: 169 NVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLF 228
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQ----------------RKLVV--------------- 160
M G + SL N +V LC+ RK++
Sbjct: 229 KEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKE 288
Query: 161 ----EAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVV 215
EA L ++ ++ I PN I Y L+ GYC L EA+ + +LM P I
Sbjct: 289 GKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTF 348
Query: 216 DKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMF 275
+I+ + K+ + DE MK+F+ + KR TY I++ C+ GK+ A + +EM
Sbjct: 349 TSLIKGYCKVKRVDEGMKLFRKIS-KRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMV 407
Query: 276 KRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP----DISLYHGLIKGLLRLRRAR 331
G+ D +T ++ GL G+L +A ++ E+++K DI +Y +I+G+ + +
Sbjct: 408 SLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVE 467
Query: 332 EATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
+A +F + +G +P + TY +++ G L K+G
Sbjct: 468 DAWNLFCSLPCKGVKPNVMTYTVMISG-LCKKG 499
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 142/295 (48%), Gaps = 7/295 (2%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKT-FKIALMTLAEVRELKKMV 128
AHN T N M++ + + L ++ + D T F + L ++ + V
Sbjct: 96 IAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAV 155
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGY 187
M + GC+ ++ N +V +C+ A L+ K+ E +K + Y +I
Sbjct: 156 VLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSL 215
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C G + A ++ M +G + S+ + ++ K K ++ +++ + M +++
Sbjct: 216 CRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIP-N 274
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
+ T+ ++ID K GK+ +A + +EM +GI + +T +S++ G + RL EA +++
Sbjct: 275 VITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLD 334
Query: 308 EIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+ + PDI + LIKG +++R E ++FR++ KRG TY +L+QG
Sbjct: 335 LMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQG 389
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 123/286 (43%), Gaps = 36/286 (12%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
N ITFN ++D+ K + E +EM + + N T+ + L + N
Sbjct: 274 NVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNML 333
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
+M C + ++K C+ K V E L K+S+ + N + Y L++G+C
Sbjct: 334 DLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQS 393
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD-DL--- 246
G L A +++ M G P + +++ K ++A+++F+ ++ +M+ D+
Sbjct: 394 GKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMY 453
Query: 247 ------------------------------GLSTYRIVIDWMCKRGKISQAYTMLEEMFK 276
+ TY ++I +CK+G +S+A +L +M +
Sbjct: 454 TIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 513
Query: 277 RGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISLYHGLIK 322
G E ++ T +++I L G L + K++EE++ S IK
Sbjct: 514 DGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIK 559
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/333 (20%), Positives = 130/333 (39%), Gaps = 67/333 (20%)
Query: 90 IDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKV 149
IDLF E ++ LV+ F +A ++ +++F M G +++ LN +
Sbjct: 50 IDLFQEMIRSRPLPSLVDFSRF---FSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIM 106
Query: 150 VKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGF 208
+ C+ A ++ K+ + +P+ + LI G C + EA + M + G
Sbjct: 107 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGC 166
Query: 209 EPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAY 268
+P++ TY +++ +CK G S A
Sbjct: 167 QPNV------------------------------------VTYNSIVNGICKSGDTSLAL 190
Query: 269 TMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGL 324
+L +M +R ++AD T S+II L G + A + +E+E K + Y+ L+ GL
Sbjct: 191 DLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGL 250
Query: 325 LRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVK 384
+ + + Q+ ++M R P + T+ + + VK
Sbjct: 251 CKAGKWNDGVQLLKDMTSRKIIPNVITF-----------------------NVLIDVFVK 287
Query: 385 AGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
GK +A + + ++ +G+ YN + Y
Sbjct: 288 EGKLQEANELYKEMITKGISPNTITYNSLMDGY 320
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 98/209 (46%), Gaps = 22/209 (10%)
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY----KV 305
T I+I+ C+ K AY++L ++ K G E D T +++I GL ++ EA ++
Sbjct: 102 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARM 161
Query: 306 VEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG------- 358
VE +P++ Y+ ++ G+ + A + R+M +R + + TY ++
Sbjct: 162 VENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCI 221
Query: 359 --------HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY 410
+ +G K LV ++++ VGGL KAGK D + ++ + +R + +
Sbjct: 222 DAAISLFKEMETKGIKSS--LVTYNSL-VGGLCKAGKWNDGVQLLKDMTSRKIIPNVITF 278
Query: 411 NKFLHYYSNEEGVVMFEEVGKKLREVGLA 439
N + + E + E+ K++ G++
Sbjct: 279 NVLIDVFVKEGKLQEANELYKEMITKGIS 307
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 91/223 (40%), Gaps = 38/223 (17%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMV 128
N++T++ +V +S +++ E QEM ++ D T+ I L L + +L+K +
Sbjct: 376 LVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKAL 435
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGY 187
F + + M +++ +C+ V +A L L + +KPN + Y +I G
Sbjct: 436 EIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGL 495
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C G L EA+ + M ++G EP+
Sbjct: 496 CKKGSLSEANILLRKMEEDGNEPND----------------------------------- 520
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
TY +I + G ++ + ++EEM G AD ++ +I
Sbjct: 521 -CTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 562
>gi|449505615|ref|XP_004162522.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g73400, mitochondrial-like [Cucumis sativus]
Length = 559
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 114/468 (24%), Positives = 201/468 (42%), Gaps = 49/468 (10%)
Query: 26 LHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIG 85
+ +L LT + I + + + FF + + Q ++H +N M+DI+
Sbjct: 103 MEGALDQVGVYLTTDLVADILHRLRFDEKLAFRFFTWAAR-QENYSHEPRVYNEMIDILS 161
Query: 86 KSR----NIDLFWETLQEMGRRRLVNDKT-------FKIA-------LMTLAEVRELKKM 127
+R + + L M R NDK F I L L + + KK+
Sbjct: 162 STRYKVKQFRIVCDLLDYMKR----NDKNTVPVEVLFGILRNYTDKYLTCLQKFAKKKKV 217
Query: 128 VNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGY 187
+ + + N ++ LC+ LV +A+ L+ K+ + +KP+ Y + G+
Sbjct: 218 I--------VKRQPEINAFNLLLDALCKCSLVEDAEALLKKVKKKLKPDANTYNIMXFGW 269
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK--RMDD 245
C V + ++ M + GF+P + I +F K EA ++F+ MR K +
Sbjct: 270 CRVRNPGRGMRVLEEMIELGFDPDNFTYNTAIASFCKAGMLKEACELFEFMRTKGSALSS 329
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
TY I+I + G++ + + LE M K G D T +I G+ G+++EAY
Sbjct: 330 PTAKTYAIMIVALVNNGRMEECFKFLEYMIKSGCLPDVSTYKEMIEGICVAGKVQEAYMF 389
Query: 306 VEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML------ 355
+EE+ K PDI Y+ +K L + + +A + MI+ GC P++ TY ML
Sbjct: 390 LEEMGKKGYPPDIVTYNCFLKVLCDNKMSDDALRHCDRMIEVGCLPSVQTYNMLISMFFE 449
Query: 356 LQGHLG------KRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFD 409
+ H G + R G V+ I + GL K DA +E V+N+G+++P
Sbjct: 450 MNDHNGAFQIWLEMDRYGCTRDVDSYCIMIEGLFGCNKVGDACLLLEEVVNKGMKLPFRK 509
Query: 410 YNKFLHYYSNEEGVVMFEEVGKKLREVGLADLADIFQRYGKKMATRER 457
++ FL S + + + +R+ +A F K+M+ R
Sbjct: 510 FDSFLMQLSVNGNLKGIHRLSEHMRKFYNRAMARRFSLNQKRMSVSLR 557
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 183/414 (44%), Gaps = 26/414 (6%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETL--QEMGRRRLVNDKTFKIALMTLAEVRELKKM 127
F +++N ++D I + R +F E + + + +N ++ I + L+
Sbjct: 163 FMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMG 222
Query: 128 VNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKG 186
+ FF M C ++ N V+ C+ K + EA L+ + E ++PN + Y +I G
Sbjct: 223 LRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVING 282
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDD 245
C VG + E S + M +GF P + ++ + K+ +A+ + +M+R D
Sbjct: 283 LCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPD 342
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
+ TY +I+ MCK G +++A ++M RG+ + +T +S+I G +G + EAY++
Sbjct: 343 V--VTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRI 400
Query: 306 VEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL- 360
+E+ + P I Y+ L+ G R EA + R M +G P + +Y ++ G
Sbjct: 401 WDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCR 460
Query: 361 -----------GKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFD 409
+ KG P + + GL + + +A + ++N+ + F
Sbjct: 461 YQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFT 520
Query: 410 YNKFLHYYSNE----EGVVMFEEVGKKLREVGLADLADIFQRYGKKMATRERRR 459
Y ++ Y E E + + +E+ KK + K+ TRE +R
Sbjct: 521 YTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKR 574
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 149/336 (44%), Gaps = 18/336 (5%)
Query: 29 SLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSR 88
+L NF H+FF C L + ++ Q A NS VD G
Sbjct: 64 TLKFINFAKPHQFFNPHCKCIALHILTKFKLYKTAQNLAQDLAENS------VDEKG--- 114
Query: 89 NIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNK 148
+ F++ L++ + F + + + + + ++K +N + G + N
Sbjct: 115 --NYFFQCLKDTYFMCNSSSAVFDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNA 172
Query: 149 VVKTL--CQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDE 206
++ ++ C++ ++ K ++ + N +Y LI+G+C G+L + + M
Sbjct: 173 ILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERN 232
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQ 266
P++ + +I + K+ + DEA K+ + M ++ ++ L TY +VI+ +C+ G+I +
Sbjct: 233 RCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEP-NLLTYNMVINGLCRVGRIEE 291
Query: 267 AYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIK 322
+L EM ++G D +T ++++ G G +A + E+ + PD+ Y LI
Sbjct: 292 TSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLIN 351
Query: 323 GLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+ + A + F +M RG P TY L+ G
Sbjct: 352 TMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLING 387
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 136/308 (44%), Gaps = 26/308 (8%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHI 133
+T+ +++ + K+ N++ E +M R L N T+ + ++ + + +
Sbjct: 344 VTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDE 403
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGD 192
M G ++ N ++ C + EA L+ + + + P+ ++Y +I G+C +
Sbjct: 404 MIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQE 463
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM--DDLGLST 250
L A ++ M ++G P +I+ + + +EA +FQ M K + D+ T
Sbjct: 464 LDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEF---T 520
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK------ 304
Y +I+ CK G +++A + +EM K+G D +T + +I GL + R REA +
Sbjct: 521 YTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLF 580
Query: 305 -------------VVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
++E + LIKG EA QVF MIKR +P
Sbjct: 581 YDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAV 640
Query: 352 YIMLLQGH 359
Y +++ GH
Sbjct: 641 YNVIIHGH 648
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 99/219 (45%), Gaps = 20/219 (9%)
Query: 147 NKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
+ +++ LC+++ + EA L + L++ + P+E Y LI GYC GDL EA + + M
Sbjct: 487 SSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIK 546
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM--------------RVKRMDDLGLSTY 251
+GF P + +I K + EA ++ + ++ D+ +
Sbjct: 547 KGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSV 606
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK 311
+I C +G +++A + E M KR + + + II+G G + +A+K+ +E+
Sbjct: 607 VALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVD 666
Query: 312 ----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
P L+K L + V R+++ R C+
Sbjct: 667 FGFIPHTVTIIALVKALYSEGMDEQLNLVIRDIL-RSCK 704
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 4/132 (3%)
Query: 149 VVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEG 207
++K C + L+ EA + + KPNE Y +I G+C G++ +A K++ M D G
Sbjct: 609 LIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFG 668
Query: 208 FEPSIDVVDKMIETFFKINKDDEAMKVFQ-MMRVKRMDDLGLSTYRIVIDWMCKRGKISQ 266
F P + +++ + D++ V + ++R ++ D LS + I+ K G I
Sbjct: 669 FIPHTVTIIALVKALYSEGMDEQLNLVIRDILRSCKLSDAELSKALVQINH--KEGNIDA 726
Query: 267 AYTMLEEMFKRG 278
+ +L EM K G
Sbjct: 727 VFNLLTEMAKDG 738
>gi|224107773|ref|XP_002333469.1| predicted protein [Populus trichocarpa]
gi|222836989|gb|EEE75382.1| predicted protein [Populus trichocarpa]
Length = 1048
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/420 (23%), Positives = 175/420 (41%), Gaps = 65/420 (15%)
Query: 26 LHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIG 85
+ +L C T E + N + FF + K Q F + T+N + + G
Sbjct: 649 IQDALEKCTIQFTPELVAETLRNCGMHGNAALHFFAWVGK-QNGFCQTTETYNMAMKVSG 707
Query: 86 KSRNIDLFWETLQEMGRRR-LVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLE 144
+ ++ EM RR L+ T+ I +M + + F M GC +
Sbjct: 708 RGKDFKHMRSLFYEMRRRGFLIPPDTWAIMIMQYGRTGLTEIALKIFGEMKASGCNPNDS 767
Query: 145 MLNKVVKTLCQRK--LVVEAKYLILKLSEWIKPNEIAYGWLIKGY----CDVGDLIEASK 198
++ LC RK V EA I E I+ + L+ Y C+VG L+EA K
Sbjct: 768 TYKYLIIFLCGRKGRKVDEA---IKIFREMIRAGHVPDKELVGTYLCCLCEVGKLLEARK 824
Query: 199 IWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWM 258
VD + + F + ++Y + I +
Sbjct: 825 ---------------SVDSLCKAGFTVP----------------------ASYSLYIRAL 847
Query: 259 CKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDI 314
C+ G + +A ++++++ D T +S+++GLL +GRL EA V+ +++ P +
Sbjct: 848 CRAGMLEEALSLVDQVSTEKTTLDRYTHASLVHGLLQKGRLEEALAKVDSMKQVGINPTV 907
Query: 315 SLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG---------- 364
+Y LI R + A +A ++F M + GCEPT+ TY L++G++
Sbjct: 908 HVYTSLIVHFFREKLASKALEIFESMKQEGCEPTIVTYSALIRGYMDTENVIEAWNVFHS 967
Query: 365 --RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEG 422
KGP P ++F+ L +AGKS +A + + +++ G+ VP + + + N EG
Sbjct: 968 LKTKGPAPDFKTYSMFLSCLCRAGKSEEALQLLSDMVDNGI-VPSNVNFRTVFFGLNREG 1026
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 142/327 (43%), Gaps = 12/327 (3%)
Query: 40 EFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQE 99
E L+ C P Y FF + K + F H + T+N M+ G++R + L+E
Sbjct: 174 EKVLKRCYKVP---HLAYRFFNWV-KTKDGFCHTTKTYNTMLYTAGEAREFSVVDVLLEE 229
Query: 100 MGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQR-K 157
M + D KT+ I + + + + K + M GCE +E+ + +LC K
Sbjct: 230 MEKYSCERDIKTWTILIRQYGKAKLIGKALLVHEKMRKSGCEPDVEVYEVTLHSLCDAGK 289
Query: 158 LVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDK 217
+ + + ++PN Y L+ GD+ + + M P DV
Sbjct: 290 GEIALEIYKEMVQREMEPNLSLYKMLLNCLAKSGDVSAVQSVADDMIRVSQIPEHDVHVC 349
Query: 218 MIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKR 277
+++++ + EA+++ + ++ K + L ++ + + +I+ A ++E M KR
Sbjct: 350 VLKSYCVAGRIREALELIRDLKNKEIQ-LDYEVSETLVKGLSRANRIADALEIVEIM-KR 407
Query: 278 GIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREA 333
D II G L R L +A + + +++ P S Y L++ L R ++
Sbjct: 408 KDFVDGKVYGIIINGYLRRNELSKALDLFQSMKEFGHLPTTSTYTELMQHLFRSNEYQKC 467
Query: 334 TQVFREMIKRGCEPTMHTYIMLLQGHL 360
+++ EM++RG E + ++ GH+
Sbjct: 468 CELYDEMLERGVEIDSVAVMAIVAGHV 494
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 118/285 (41%), Gaps = 46/285 (16%)
Query: 65 KAQPCFAHNSITFNRMVDIIG-KSRNIDLFWETLQEMGRRRLVNDK----TFKIALMTLA 119
KA C ++S ++ + G K R +D + +EM R V DK T+ L +
Sbjct: 758 KASGCNPNDSTYKYLIIFLCGRKGRKVDEAIKIFREMIRAGHVPDKELVGTYLCCLCEVG 817
Query: 120 EVRELKKMVNFFHIMNDCGCEYSLEMLNKV-VKTLCQRKLVVEAKYLILKLS-EWIKPNE 177
++ E +K V+ C +++ + ++ LC+ ++ EA L+ ++S E +
Sbjct: 818 KLLEARKSVDSL-----CKAGFTVPASYSLYIRALCRAGMLEEALSLVDQVSTEKTTLDR 872
Query: 178 IAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQM 237
+ L+ G G L EA + M G P++ V +I FF+ +A+++F+
Sbjct: 873 YTHASLVHGLLQKGRLEEALAKVDSMKQVGINPTVHVYTSLIVHFFREKLASKALEIFES 932
Query: 238 MRVK---------------RMDDLGL-------------------STYRIVIDWMCKRGK 263
M+ + MD + TY + + +C+ GK
Sbjct: 933 MKQEGCEPTIVTYSALIRGYMDTENVIEAWNVFHSLKTKGPAPDFKTYSMFLSCLCRAGK 992
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
+A +L +M GI N+ ++ +GL G+ A V+++
Sbjct: 993 SEEALQLLSDMVDNGIVPSNVNFRTVFFGLNREGKQSLAQTVLQK 1037
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 7/162 (4%)
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQ 266
GF+ ++V+K+++ +K+ A + F ++ K TY ++ + + S
Sbjct: 165 GFQLEPEIVEKVLKRCYKV--PHLAYRFFNWVKTKDGFCHTTKTYNTMLYTAGEAREFSV 222
Query: 267 AYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIK 322
+LEEM K E D T + +I + +A V E++ K PD+ +Y +
Sbjct: 223 VDVLLEEMEKYSCERDIKTWTILIRQYGKAKLIGKALLVHEKMRKSGCEPDVEVYEVTLH 282
Query: 323 GLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
L + A ++++EM++R EP + Y MLL L K G
Sbjct: 283 SLCDAGKGEIALEIYKEMVQREMEPNLSLYKMLLNC-LAKSG 323
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 168/367 (45%), Gaps = 34/367 (9%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
N +T+N ++ + K++ +D E L M + ++ N +T+ + + K+ + F
Sbjct: 233 NVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFL 292
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
M+ G E + N ++ LC+ EA+ + +++ +KP YG L++GY
Sbjct: 293 KKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATK 352
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G L+E + +LM G P+ V +I + K K D+AM VF MR + ++ T
Sbjct: 353 GALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNP-DTVT 411
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y VI +CK G++ A E+M + N+ +S+I+ L + +A +++ E+
Sbjct: 412 YGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEML 471
Query: 311 KPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK 366
I L ++ +I + R E+ ++F M++ G +P + TY L+ G+
Sbjct: 472 DRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGY------- 524
Query: 367 GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN----EEG 422
AGK +A K + +++ G++ YN ++ Y E+
Sbjct: 525 ----------------CLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568
Query: 423 VVMFEEV 429
+V+F E+
Sbjct: 569 LVLFREM 575
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 138/302 (45%), Gaps = 22/302 (7%)
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW---IKPNEIAYGWLIKGYCDV 190
M GC ++ N ++K LC EA L+ + + P+ ++Y +I G+
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
GDL +A ++ M D G P++ + +I K D+AM+V M VK T
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSM-VKNGVMPNCRT 271
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y ++ C G+ +A L++M G+E D +T +S++ L GR EA K+ + +
Sbjct: 272 YNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMT 331
Query: 311 ----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK 366
KP+I+ Y L++G E + M++ G P + + +L+ + K+G+
Sbjct: 332 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAY-AKQGKV 390
Query: 367 GPDPLV---------NFDTI----FVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
LV N DT+ +G L K+G+ DA +Y E++++ + YN
Sbjct: 391 DQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSL 450
Query: 414 LH 415
+H
Sbjct: 451 IH 452
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 142/306 (46%), Gaps = 15/306 (4%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAE 120
+++ Q +++T+ ++ I+ KS ++ ++M RL + + + +L
Sbjct: 397 FSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCI 456
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIA 179
+ K M D G N ++ + C+ V+E++ L L + +KPN I
Sbjct: 457 FDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIIT 516
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
Y LI GYC G + EA+K+ M G +P + +I + KI++ ++A+ +F
Sbjct: 517 YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLF---- 572
Query: 240 VKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
+ M+ G+S TY I++ + + + + A + + + G + + T + I++GL
Sbjct: 573 -REMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCK 631
Query: 296 RGRLREAYKVVEEIEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
EA ++ + + D+ L ++ +I LL++ R EA +F + G P + T
Sbjct: 632 NNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRT 691
Query: 352 YIMLLQ 357
Y ++ +
Sbjct: 692 YSLMAE 697
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 117/257 (45%), Gaps = 6/257 (2%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYL 165
N F I + A+ ++ + + F M G V+ LC+ V +A +Y
Sbjct: 373 NHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYF 432
Query: 166 ILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI 225
+ E + P I Y LI C +A ++ M D G + +I++ K
Sbjct: 433 EQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKE 492
Query: 226 NKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
+ E+ K+F +M V+ + TY +ID C GK+ +A +L M G++ D +T
Sbjct: 493 GRVIESEKLFDLM-VRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 551
Query: 286 LSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMI 341
+++I G R+ +A + E+E PDI Y+ +++GL + RR A +++ +
Sbjct: 552 YNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT 611
Query: 342 KRGCEPTMHTYIMLLQG 358
+ G + + TY ++L G
Sbjct: 612 ESGTQLELSTYNIILHG 628
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 85/194 (43%), Gaps = 23/194 (11%)
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
L TY I+I C G++ + L + K+G D + + ++ GL A R +A +V
Sbjct: 91 LCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVL 150
Query: 308 EIEK-----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG--CEPTMHTYIMLLQGHL 360
P++ Y+ L+KGL R++EA ++ + M G C P + +Y ++ G
Sbjct: 151 RRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFF 210
Query: 361 GKRG-------------RKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
K G +G P +V +++I + L KA A + + ++ GV
Sbjct: 211 -KEGDLDKAYGTYHEMLDRGILPNVVTYNSI-IAALCKAQAMDKAMEVLTSMVKNGVMPN 268
Query: 407 RFDYNKFLHYYSNE 420
YN +H Y +
Sbjct: 269 CRTYNSIVHGYCSS 282
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 49/246 (19%), Positives = 107/246 (43%), Gaps = 3/246 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFF 131
N IT++ ++D + +D + L M + D T+ + ++ ++ + F
Sbjct: 513 NIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLF 572
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIA-YGWLIKGYCDV 190
M G + N +++ L Q + AK L + ++E E++ Y ++ G C
Sbjct: 573 REMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKN 632
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
EA +++ + + + MI K+ ++DEA +F + + + T
Sbjct: 633 NLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVP-DVRT 691
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y ++ + + ++G + + + M + G A++ L+SI+ LL RG + A + I+
Sbjct: 692 YSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMID 751
Query: 311 KPDISL 316
+ SL
Sbjct: 752 EKHFSL 757
>gi|224088126|ref|XP_002308333.1| predicted protein [Populus trichocarpa]
gi|222854309|gb|EEE91856.1| predicted protein [Populus trichocarpa]
Length = 1048
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/420 (23%), Positives = 175/420 (41%), Gaps = 65/420 (15%)
Query: 26 LHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIG 85
+ +L C T E + N + FF + K Q F + T+N + + G
Sbjct: 649 IQDALEKCTIQFTPELVAETLRNCGMHGNAALHFFAWVGK-QNGFCQTTETYNMAMKVSG 707
Query: 86 KSRNIDLFWETLQEMGRRR-LVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLE 144
+ ++ EM RR L+ T+ I +M + + F M GC +
Sbjct: 708 RGKDFKHMRSLFYEMRRRGFLIPPDTWAIMIMQYGRTGLTEIALKIFGEMKASGCNPNDS 767
Query: 145 MLNKVVKTLCQRK--LVVEAKYLILKLSEWIKPNEIAYGWLIKGY----CDVGDLIEASK 198
++ LC RK V EA I E I+ + L+ Y C+VG L+EA K
Sbjct: 768 TYKYLIIFLCGRKGRKVDEA---IKIFREMIRAGHVPDKELVGTYLCCLCEVGKLLEARK 824
Query: 199 IWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWM 258
VD + + F + ++Y + I +
Sbjct: 825 ---------------SVDSLCKAGFTVP----------------------ASYSLYIRAL 847
Query: 259 CKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDI 314
C+ G + +A ++++++ D T +S+++GLL +GRL EA V+ +++ P +
Sbjct: 848 CRAGMLEEALSLVDQVSTEKTTLDRYTHASLVHGLLQKGRLEEALAKVDSMKQVGINPTV 907
Query: 315 SLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG---------- 364
+Y LI R + A +A ++F M + GCEPT+ TY L++G++
Sbjct: 908 HVYTSLIVHFFREKLASKALEIFESMKQEGCEPTIVTYSALIRGYMDTENVIEAWNVFHS 967
Query: 365 --RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEG 422
KGP P ++F+ L +AGKS +A + + +++ G+ VP + + + N EG
Sbjct: 968 LKTKGPAPDFKTYSMFLSCLCRAGKSEEALQLLSDMVDNGI-VPSNVNFRTVFFGLNREG 1026
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 142/327 (43%), Gaps = 12/327 (3%)
Query: 40 EFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQE 99
E L+ C P Y FF + K + F H + T+N M+ G++R + L+E
Sbjct: 174 EKVLKRCYKVP---HLAYRFFNWV-KTKDGFCHTTKTYNTMLYTAGEAREFSVVDVLLEE 229
Query: 100 MGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQR-K 157
M + D KT+ I + + + + K + M GCE +E+ + +LC K
Sbjct: 230 MEKYSCERDIKTWTILIQQYGKAKLVGKALLVHEKMRKSGCEPDVEVYEVTLHSLCDAGK 289
Query: 158 LVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDK 217
+ + + ++PN Y L+ GD+ + + M P DV
Sbjct: 290 GEIALEIYKEMVQREMEPNLSLYKMLLNCLAKSGDVSAVQSVADDMIRVSQIPEHDVHVC 349
Query: 218 MIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKR 277
+++++ + EA+++ + ++ K + L ++ + + +I+ A ++E M KR
Sbjct: 350 VLKSYCVAGRIREALELIRDLKNKEIQ-LDYEVSETLVKGLSRANRIADALEIVEIM-KR 407
Query: 278 GIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREA 333
D II G L R L +A + + +++ P S Y L++ L R ++
Sbjct: 408 KDFVDGKVYGIIINGYLRRNELSKALDLFQSMKEFGHLPTTSTYTELMQHLFRSNEYQKC 467
Query: 334 TQVFREMIKRGCEPTMHTYIMLLQGHL 360
+++ EM++RG E + ++ GH+
Sbjct: 468 CELYDEMLERGVEIDSVAVMAIVAGHV 494
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 118/285 (41%), Gaps = 46/285 (16%)
Query: 65 KAQPCFAHNSITFNRMVDIIG-KSRNIDLFWETLQEMGRRRLVNDK----TFKIALMTLA 119
KA C ++S ++ + G K R +D + +EM R V DK T+ L +
Sbjct: 758 KASGCNPNDSTYKYLIIFLCGRKGRKVDEAIKIFREMIRAGHVPDKELVGTYLCCLCEVG 817
Query: 120 EVRELKKMVNFFHIMNDCGCEYSLEMLNKV-VKTLCQRKLVVEAKYLILKLS-EWIKPNE 177
++ E +K V+ C +++ + ++ LC+ ++ EA L+ ++S E +
Sbjct: 818 KLLEARKSVDSL-----CKAGFTVPASYSLYIRALCRAGMLEEALSLVDQVSTEKTTLDR 872
Query: 178 IAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQM 237
+ L+ G G L EA + M G P++ V +I FF+ +A+++F+
Sbjct: 873 YTHASLVHGLLQKGRLEEALAKVDSMKQVGINPTVHVYTSLIVHFFREKLASKALEIFES 932
Query: 238 MRVK---------------RMDDLGL-------------------STYRIVIDWMCKRGK 263
M+ + MD + TY + + +C+ GK
Sbjct: 933 MKQEGCEPTIVTYSALIRGYMDTENVIEAWNVFHSLKTKGPAPDFKTYSMFLSCLCRAGK 992
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
+A +L +M GI N+ ++ +GL G+ A V+++
Sbjct: 993 SEEALQLLSDMVDNGIVPSNVNFRTVFFGLNREGKQSLAQTVLQK 1037
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 7/162 (4%)
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQ 266
GF+ ++V+K+++ +K+ A + F ++ K TY ++ + + S
Sbjct: 165 GFQLEPEIVEKVLKRCYKV--PHLAYRFFNWVKTKDGFCHTTKTYNTMLYTAGEAREFSV 222
Query: 267 AYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIK 322
+LEEM K E D T + +I + +A V E++ K PD+ +Y +
Sbjct: 223 VDVLLEEMEKYSCERDIKTWTILIQQYGKAKLVGKALLVHEKMRKSGCEPDVEVYEVTLH 282
Query: 323 GLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
L + A ++++EM++R EP + Y MLL L K G
Sbjct: 283 SLCDAGKGEIALEIYKEMVQREMEPNLSLYKMLLNC-LAKSG 323
>gi|6723418|emb|CAB66911.1| putative protein [Arabidopsis thaliana]
Length = 1184
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 189/429 (44%), Gaps = 23/429 (5%)
Query: 6 GHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQK 65
G + ++ IL + +S +L +L+ +L +++ + + Y FF + K
Sbjct: 65 GEVEKIYRIL-RNHHSRVPKLELALNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLWATK 123
Query: 66 AQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRR--RLVNDKTFKIALMTLAEVRE 123
QP + H+ MV I+ K R W ++EM + L+ + F + + A
Sbjct: 124 -QPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANM 182
Query: 124 LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWL 183
+KK V M G E + ++ LC+ V EA + + E PN + L
Sbjct: 183 VKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSL 242
Query: 184 IKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM 243
+ G+C G L+EA ++ M + G EP I V ++ + K +A + MR KR
Sbjct: 243 LYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMR-KRG 301
Query: 244 DDLGLSTYRIVIDWMCKRGK-ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
+ ++ Y ++I +C+ K + +A + EM + G EAD +T +++I G G + +
Sbjct: 302 FEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKG 361
Query: 303 YKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY--IMLL 356
Y V++++ K P Y ++ + + E ++ +M +RGC P + Y ++ L
Sbjct: 362 YSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRL 421
Query: 357 QGHLGKRGR----------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV-EV 405
LG+ G P V+ I + G G ++A + + +++RG+
Sbjct: 422 ACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSA 481
Query: 406 PRFDYNKFL 414
P++ K L
Sbjct: 482 PQYGTLKSL 490
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 150/335 (44%), Gaps = 19/335 (5%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
N T+ I + L L++ V M GC + N +V C+ + A+ ++
Sbjct: 151 NVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVV 210
Query: 167 LKLSEW--IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFK 224
+ E KPN + + ++ G C G + A K+++ M EG P + + ++ + K
Sbjct: 211 SLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCK 270
Query: 225 INKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNL 284
+ E++ VF M +R + T+ +I CK G + QA ++ +M +RG+ + +
Sbjct: 271 VGCLHESLAVFSEM-TQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEV 329
Query: 285 TLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREM 340
T +++I G +G L +A VEE+ K P + Y+ LI G +L R A ++ REM
Sbjct: 330 TFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREM 389
Query: 341 IKRGCEPTMHTYIMLLQGHLG------------KRGRKGPDPLVNFDTIFVGGLVKAGKS 388
+ +P + TY ++ G+ K +KG P + + GL + +
Sbjct: 390 EAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRL 449
Query: 389 LDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGV 423
DA + E ++ GV+ F Y + + E V
Sbjct: 450 NDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNV 484
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 148/327 (45%), Gaps = 33/327 (10%)
Query: 58 LFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALM 116
+F + TQ+ + +TF ++ K+ N++ + +M R L +N+ TF +
Sbjct: 280 VFSEMTQRG---LVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALID 336
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKP 175
+ L + M CG + S+ N ++ C+ + A+ LI ++ ++ +KP
Sbjct: 337 GFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKP 396
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
+ + Y +I GYC VG+L A ++ M +G P +I + + ++A ++F
Sbjct: 397 DVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELF 456
Query: 236 QMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
+ M LG+ TY +ID CK G + +A ++ +EM ++G+ D +T S +I
Sbjct: 457 E-----NMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLIN 511
Query: 292 GLLARGRLREA----YKVVEEIEKPDISLYH---------------GLIKGLLRLRRARE 332
GL R +EA +K+ E PD Y L+KG +E
Sbjct: 512 GLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKE 571
Query: 333 ATQVFREMIKRGCEPTMHTYIMLLQGH 359
A +V++ M+ R + Y +L+ GH
Sbjct: 572 ADKVYQSMLDRNWKLDGSVYSILIHGH 598
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 98/221 (44%), Gaps = 4/221 (1%)
Query: 142 SLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWN 201
S+ N V+ L L ++L L + PN Y L++ C G L EA +
Sbjct: 117 SVPAYNAVLLALSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVG 176
Query: 202 LMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKR 261
M G P+ + ++ F + + D A +V +MR + L T+ +++ +CK
Sbjct: 177 DMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKA 236
Query: 262 GKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLY 317
G++ A + +EM + G+ D ++ ++++ G G L E+ V E+ + PD+ +
Sbjct: 237 GRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTF 296
Query: 318 HGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
LI + +A + +M +RG T+ L+ G
Sbjct: 297 TSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDG 337
>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 870
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 173/385 (44%), Gaps = 47/385 (12%)
Query: 73 NSITFNRMVDII---GKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
N +TFN M+ G ET+++ G V+ +++ L+ L +L + +
Sbjct: 292 NVVTFNLMLKGFCQEGMMEEARSLVETMKKGGN--FVSLESYNTWLLGLLRNGKLLEGRS 349
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYC 188
M + G E ++ N V+ LC+ ++++A+ L+ L +S + P+ + Y L+ GYC
Sbjct: 350 VLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYC 409
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
G + EA I N M +G P+ + ++ + +K + EA ++ Q M K L
Sbjct: 410 SKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQ-LDT 468
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEA----------------------DNLTL 286
T IV++ +C+ G++ +A ++ EM+ G + D +T
Sbjct: 469 VTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITY 528
Query: 287 SSIIYGLLARGRLREAYK-VVEEIEK---PDISLYHGLIKGLLRLRRAREATQVFREMIK 342
+++I GL G+L EA K +E + K PD Y + + + A +V ++M +
Sbjct: 529 TTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMER 588
Query: 343 RGCEPTMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSL 389
GC T+ TY L+ G LG +G+ +G P + + L + GK+
Sbjct: 589 NGCSKTLQTYNSLILG-LGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTK 647
Query: 390 DAAKYVERVMNRGVEVPRFDYNKFL 414
DA + ++++GV P K L
Sbjct: 648 DATSLLHEMLDKGVVSPNVSSFKIL 672
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 167/372 (44%), Gaps = 25/372 (6%)
Query: 54 RPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKI 113
RP Y+ YT Q + TFN ++ + +S +D E +M + +K F +
Sbjct: 131 RPHYVTSLYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNK-FTV 189
Query: 114 ALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-W 172
++ R + + G + + N +V + C++ + EA+ L+ +++E
Sbjct: 190 GILVRGFCRAGRTKQALEFVDGKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKG 249
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGF----EPSIDVVDKMIETFFKINKD 228
+ P+ + + I C G + EAS+I+ M +G +P++ + M++ F +
Sbjct: 250 LLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMM 309
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
+EA + + M+ K + + L +Y + + + GK+ + ++L+EM + GIE + + +
Sbjct: 310 EEARSLVETMK-KGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNI 368
Query: 289 IIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
++ GL + +A ++++ + PD Y L+ G + EA + EMI++G
Sbjct: 369 VMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKG 428
Query: 345 CEPTMHTYIMLLQGHLGKRGRKGP---------DPLVNFDT----IFVGGLVKAGKSLDA 391
C P +T LL L K GRK + DT I V GL + G+ A
Sbjct: 429 CHPNTYTCNTLLNS-LWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKA 487
Query: 392 AKYVERVMNRGV 403
++ V + G
Sbjct: 488 SEVVSEMWTDGT 499
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 118/249 (47%), Gaps = 29/249 (11%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEA 196
GC + N ++ +L + EA+ ++ K++E + + + ++ G C G+L +A
Sbjct: 428 GCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKA 487
Query: 197 SKIWNLMTDEGFE----------------------PSIDVVDKMIETFFKINKDDEAMKV 234
S++ + M +G P + +I K+ K +EA K
Sbjct: 488 SEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKK 547
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
F M K + + TY + CK+GKIS A +L++M + G T +S+I GL
Sbjct: 548 FIEMMAKNLHPDSV-TYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLG 606
Query: 295 ARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG-CEPTM 349
++G++ E Y +++E+ + PDI Y+ +I L + ++AT + EM+ +G P +
Sbjct: 607 SKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNV 666
Query: 350 HTYIMLLQG 358
++ +L++
Sbjct: 667 SSFKILIKA 675
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 124/280 (44%), Gaps = 23/280 (8%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
IT+ +++ + K ++ + EM + L D T+ ++ + ++ +
Sbjct: 526 ITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKD 585
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M GC +L+ N ++ L + + E L+ ++ E I P+ Y +I C+ G
Sbjct: 586 MERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGK 645
Query: 193 LIEASKIWNLMTDEGF-EPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST- 250
+A+ + + M D+G P++ +I+ F K A ++F D+ LS
Sbjct: 646 TKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELF---------DVALSVC 696
Query: 251 ------YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK 304
Y ++ + + GK+S A + E +R + + N +I L GRL +A+
Sbjct: 697 GHKEALYSLMFNELLAGGKLSDAKELFEASLERSLLSKNFMYEDLIDKLCKDGRLDDAHG 756
Query: 305 VVEE-IEKP---DISLYHGLIKGLLRLRRAREATQVFREM 340
++++ I+K D S + +I GL + ++A ++ R M
Sbjct: 757 LLQKLIDKGYCFDHSSFIPVIDGLSKRGNKQQADELGRIM 796
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 107/234 (45%), Gaps = 7/234 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFF 131
+S+T++ V K I L++M R +T+ ++ L ++ +M
Sbjct: 559 DSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLM 618
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE--WIKPNEIAYGWLIKGYCD 189
M + G + N ++ LC+ +A L+ ++ + + PN ++ LIK +C
Sbjct: 619 DEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCK 678
Query: 190 VGDLIEASKIWNL-MTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
GD A +++++ ++ G + ++ + M K +A ++F+ + +
Sbjct: 679 SGDFKVACELFDVALSVCGHKEALYSL--MFNELLAGGKLSDAKELFEASLERSLLSKNF 736
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
Y +ID +CK G++ A+ +L+++ +G D+ + +I GL RG ++A
Sbjct: 737 -MYEDLIDKLCKDGRLDDAHGLLQKLIDKGYCFDHSSFIPVIDGLSKRGNKQQA 789
>gi|449435037|ref|XP_004135302.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Cucumis sativus]
Length = 519
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 179/401 (44%), Gaps = 32/401 (7%)
Query: 33 CN-FNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNID 91
CN L+H+ ++ F W+ F++ + F H ++ ++D +GK++ +
Sbjct: 97 CNSIQLSHDLVYKLLQRFKDDWKSALGVFRWAESLSG-FKHTPDLYDILIDTLGKTKQLV 155
Query: 92 LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVK 151
L+EM RLV T A+ A + + V F + G E + E +N ++
Sbjct: 156 KMRGMLEEMKEARLVTLDTVAKAMRRFAGAGQWENAVRIFDDLETYGLEKNTESMNVLLD 215
Query: 152 TLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPS 211
TLC+ K V +A+ + L+L I PN + I G+C V + EA M G P
Sbjct: 216 TLCKEKKVEKARQMYLELKSHIAPNANTFNMFIHGWCKVNKIDEAHWTLEEMKGYGHRPC 275
Query: 212 IDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQA 267
+ +I F ++ + KV++++ MD G TY ++ + K + +A
Sbjct: 276 VISYSTII--LFYCHRCN-FNKVYELL--DEMDAQGCPANVITYTTIMCSLTKSEEFEEA 330
Query: 268 YTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE-EIEK----PDISLYHGLIK 322
+ E M G E D L + +I+ L G++REA V E E+ P+ S Y+ +I
Sbjct: 331 LQIAERMKSAGYEPDTLFYNCLIHTLGRAGKVREAIHVFEVEMPSKSVLPNTSTYNSMIA 390
Query: 323 GLLRLRRAREATQVFREMIK-RGCEPTMHTYIMLLQG--HLGKRGRKGPDPL-------- 371
R R +A ++ EM K C+P + TY LL+ GK + L
Sbjct: 391 MYCRRAREEKAMKLLEEMQKSEHCKPDVQTYYPLLKSCFRTGKTDYDLSNLLDEMINKHH 450
Query: 372 ----VNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRF 408
++ ++ + GL +A K A + E+++++ ++ PR+
Sbjct: 451 LSLDISTYSLLIHGLCRANKCDWAYQLFEKMISQDIK-PRY 490
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 97/224 (43%), Gaps = 9/224 (4%)
Query: 67 QPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELK 125
+PC I+++ ++ N + +E L EM + N T+ + +L + E +
Sbjct: 273 RPCV----ISYSTIILFYCHRCNFNKVYELLDEMDAQGCPANVITYTTIMCSLTKSEEFE 328
Query: 126 KMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYL--ILKLSEWIKPNEIAYGWL 183
+ + M G E N ++ TL + V EA ++ + S+ + PN Y +
Sbjct: 329 EALQIAERMKSAGYEPDTLFYNCLIHTLGRAGKVREAIHVFEVEMPSKSVLPNTSTYNSM 388
Query: 184 IKGYCDVGDLIEASKIWNLMT-DEGFEPSIDVVDKMIETFFKINKDD-EAMKVFQMMRVK 241
I YC +A K+ M E +P + ++++ F+ K D + + M K
Sbjct: 389 IAMYCRRAREEKAMKLLEEMQKSEHCKPDVQTYYPLLKSCFRTGKTDYDLSNLLDEMINK 448
Query: 242 RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
L +STY ++I +C+ K AY + E+M + I+ LT
Sbjct: 449 HHLSLDISTYSLLIHGLCRANKCDWAYQLFEKMISQDIKPRYLT 492
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 136/286 (47%), Gaps = 7/286 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
N +T+N ++D K N+ EM R+ L N T+ I + L ++ + V
Sbjct: 227 NEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALR 286
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDV 190
M E ++ N ++ C+ K V EA L + + + PN + Y LI YC
Sbjct: 287 DQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKD 346
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G + +A ++N+M D G P + + +I + A + M K++ + T
Sbjct: 347 GRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLS-ADVVT 405
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y I+ID +CK+G+ +A +L+EMF++G+ ++T ++++ G G LR A V +E
Sbjct: 406 YNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRME 465
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
+ ++ ++ LIKG R +A + EM++RG P TY
Sbjct: 466 RKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTY 511
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 118/256 (46%), Gaps = 17/256 (6%)
Query: 171 EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDE 230
+ ++PN + Y LI G C G + EA + + M EP++ + +I F K +E
Sbjct: 257 QGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNE 316
Query: 231 AMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
A+ +F M + +D + TY +ID CK G++ A+ + M RGI + T + +I
Sbjct: 317 AINLFNDMEKQGVDPNAM-TYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLI 375
Query: 291 YGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
GL +G ++ A ++ E+ D+ Y+ LI L + +R+A ++ EM ++G
Sbjct: 376 AGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLN 435
Query: 347 PTMHTYIMLLQGHL------------GKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKY 394
P+ TY L+ G+ + RKG V + + G G+ DA
Sbjct: 436 PSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGL 495
Query: 395 VERVMNRGVEVPRFDY 410
+ ++ RG+ R Y
Sbjct: 496 LNEMLERGLVPNRTTY 511
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/416 (20%), Positives = 185/416 (44%), Gaps = 36/416 (8%)
Query: 16 YQQQYSPESRLHS-SLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNS 74
Y++ YS + H+ S+S +F + + F + + + F + + F +
Sbjct: 61 YEKDYSVSAIFHAISMSGDSFCVNSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSL 120
Query: 75 ITFNRMVD-IIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFH 132
I+ N ++ ++ +S N D+ + +EM +R++ +N +F I + L +V +L + +
Sbjct: 121 ISCNPLLSGLVKESENGDMEF-VYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIE 179
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQR----KLVVEAKYLILKLSEWIKPNEIAYGWLIKGYC 188
M G ++ N ++ C+ K+ L +++ I PNE+ Y LI G+C
Sbjct: 180 DMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFC 239
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
++ A +++ M +G P++ + +I K DEA+ + M ++ +
Sbjct: 240 KDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEP-NV 298
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV--- 305
T+ ++I+ CK +++A + +M K+G++ + +T +++I GR+ +A+ +
Sbjct: 299 VTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNM 358
Query: 306 -VEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
++ P++S Y+ LI GL R + A + EM+ + + TY
Sbjct: 359 MIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTY------------ 406
Query: 365 RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE 420
I + L K G+S A K ++ + +G+ YN + Y E
Sbjct: 407 -----------NILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCRE 451
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 145/296 (48%), Gaps = 9/296 (3%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVN 129
A N +T+N M+ + +S ++ + +EM L D ALM L + LK+
Sbjct: 275 AMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKA 334
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK--LSEWIKPNEIAYGWLIKGY 187
M+ G + ++ + +V + EA + ILK +S ++PN+I Y LI+G
Sbjct: 335 LLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEA-FDILKEMISAGVQPNKIMYDNLIRGL 393
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C +G L ASK+ M G P + +++ F+ + D A ++ MR +
Sbjct: 394 CKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILP-N 452
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
+ +Y I+I+ +C+ G+ +A +LEEM G++ + + +I G G + A + +E
Sbjct: 453 VYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALE 512
Query: 308 EIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
++ K PD+ Y+ LIKGL + R EA + + ++ KRG P TY L+ G+
Sbjct: 513 KMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGY 568
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 170/390 (43%), Gaps = 27/390 (6%)
Query: 78 NRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMND 136
N ++ + ++ ++L W+ M G L + T+ + + R+ F M
Sbjct: 212 NGLLKDLLRADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRR 271
Query: 137 CGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIE 195
C + N ++ LC+ V EA ++ ++ + P+ YG L+ G C L E
Sbjct: 272 RDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKE 331
Query: 196 ASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVI 255
A + + M+ G +P+I V +++ F K K EA + +K M G+ +I+
Sbjct: 332 AKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDI-----LKEMISAGVQPNKIMY 386
Query: 256 D----WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK 311
D +CK G++ +A +L+EM K G+ D T + ++ G + A++++ E+
Sbjct: 387 DNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRN 446
Query: 312 ----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH-------- 359
P++ Y +I GL + ++EA + EMI G +P Y L+ GH
Sbjct: 447 SGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISL 506
Query: 360 ----LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
L K + P + + GL G+ +A +Y +V RG+ F Y+ +H
Sbjct: 507 ACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIH 566
Query: 416 YYSNEEGVVMFEEVGKKLREVGLADLADIF 445
Y + +++ +++ GL AD +
Sbjct: 567 GYCKTGNLEKADQLLRQMLNSGLKPNADTY 596
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 151/355 (42%), Gaps = 65/355 (18%)
Query: 142 SLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASK-- 198
S +L+ +V T + V A ++L +++ + P L+K DL+ A
Sbjct: 172 STAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLK------DLLRADAME 225
Query: 199 -IWNL---MTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIV 254
+W L M G P + IE K D A KVF+ MR +R + TY ++
Sbjct: 226 LLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMR-RRDCAMNEVTYNVM 284
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE---- 310
I +C+ G + +A+ EEM G+ D T +++ GL RL+EA +++E+
Sbjct: 285 ISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGL 344
Query: 311 KPDIS-----------------------------------LYHGLIKGLLRLRRAREATQ 335
KP+I +Y LI+GL ++ + A++
Sbjct: 345 KPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASK 404
Query: 336 VFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVN------------FDTIFVGGLV 383
+ +EMIK G P TY L+QGH + + G L+N I + GL
Sbjct: 405 LLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLC 464
Query: 384 KAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
+ G+S +A +E +++ G++ F Y + +S E + + E +K+ + +
Sbjct: 465 QNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANV 519
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 116/270 (42%), Gaps = 29/270 (10%)
Query: 147 NKVVKTLCQRKLVVEAK-YLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N ++K L + EA+ Y + P+E Y LI GYC G+L +A ++ M +
Sbjct: 527 NSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLN 586
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKIS 265
G +P+ D ++E +FK N ++ + Q M + D Y IVI + + +
Sbjct: 587 SGLKPNADTYTDLLEGYFKSNDYEKVSSILQSM-LGSGDKPDNHIYGIVIRNLSRSENME 645
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLI 321
A+ +L E+ K G+ D SS+I GL + +A +++E+ K P I Y+ LI
Sbjct: 646 VAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALI 705
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGG 381
G R A VF ++ +G P TY L+ G+
Sbjct: 706 DGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGN---------------------- 743
Query: 382 LVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
K G DA + +++RG+ F YN
Sbjct: 744 -CKNGDITDAFDLYKEMLDRGIAPDAFVYN 772
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 136/312 (43%), Gaps = 9/312 (2%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAE 120
Y Q + + T++ ++ K+ N++ + L++M L N T+ L +
Sbjct: 546 YAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFK 605
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE--WIKPNEI 178
+ +K+ + M G + + V++ L R +E +++L E + P+
Sbjct: 606 SNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNL-SRSENMEVAFMVLTEVEKNGLVPDLH 664
Query: 179 AYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
Y LI G C + D+ +A + + M EG EP I + +I+ F + A VF +
Sbjct: 665 IYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSI 724
Query: 239 RVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR 298
K + TY +ID CK G I+ A+ + +EM RGI D + + G
Sbjct: 725 LAKGLVP-NCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAAD 783
Query: 299 LREAYKVVEEIEK---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
L +A + EE+ ++SL++ L+ G + + +E ++ M+ R P T +
Sbjct: 784 LEQALFLTEEMFNRGYANVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQT-VEK 842
Query: 356 LQGHLGKRGRKG 367
+ GK G+ G
Sbjct: 843 VVSEFGKAGKLG 854
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 107/237 (45%), Gaps = 10/237 (4%)
Query: 84 IGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVNFFHIMNDCGCEYS 142
+ +S N+++ + L E+ + LV D +L++ L ++ +++K V M G E
Sbjct: 638 LSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPG 697
Query: 143 LEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWN 201
+ N ++ C+ + A+ + L++ + PN + Y LI G C GD+ +A ++
Sbjct: 698 IVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYK 757
Query: 202 LMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG---LSTYRIVIDWM 258
M D G P D + D A + + M + G +S + ++
Sbjct: 758 EMLDRGIAP-----DAFVYNVLATGCSDAADLEQALFLTEEMFNRGYANVSLFNTLVHGF 812
Query: 259 CKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDIS 315
CKRGK+ + +L M R I + T+ ++ G+L EA++V E+++ S
Sbjct: 813 CKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQKKAS 869
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 109/261 (41%), Gaps = 17/261 (6%)
Query: 170 SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD 229
+ I PN +YG +I G C G+ EA + M EG +P+ + +I K
Sbjct: 446 NSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNIS 505
Query: 230 EAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSI 289
A + + M + L Y +I + G++ +A ++ KRG+ D T S +
Sbjct: 506 LACEALEKMTKANVHP-DLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGL 564
Query: 290 IYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGC 345
I+G G L +A +++ ++ KP+ Y L++G + + + + + M+ G
Sbjct: 565 IHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGD 624
Query: 346 EPTMHTYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAK 393
+P H Y ++++ L + + G P ++ + + GL K A
Sbjct: 625 KPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVG 684
Query: 394 YVERVMNRGVEVPRFDYNKFL 414
++ + G+E YN +
Sbjct: 685 LLDEMAKEGLEPGIVCYNALI 705
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 103/265 (38%), Gaps = 66/265 (24%)
Query: 209 EPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS------------------- 249
PS V+D +++T+ K A +V MM DLGL+
Sbjct: 170 SPSTAVLDVLVDTYKKTGSVRNAAQVVLMMA-----DLGLAPTRRCCNGLLKDLLRADAM 224
Query: 250 --------------------TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSI 289
TY I+ CK A + EEM +R + +T + +
Sbjct: 225 ELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVM 284
Query: 290 IYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGC 345
I GL G + EA+ EE+ PD Y L+ GL + R +EA + EM G
Sbjct: 285 ISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGL 344
Query: 346 EPTMHTYIMLLQGHLGKRGRKG---------------PDPLVNFDTIFVGGLVKAGKSLD 390
+P + Y L+ G + K G+ P+ ++ +D + + GL K G+
Sbjct: 345 KPNIVVYGTLVDGFM-KEGKTAEAFDILKEMISAGVQPNKIM-YDNL-IRGLCKIGQLGR 401
Query: 391 AAKYVERVMNRGVEVPRFDYNKFLH 415
A+K ++ ++ G+ F YN +
Sbjct: 402 ASKLLKEMIKVGLRPDTFTYNPLMQ 426
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 41/85 (48%)
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
+ L+ G+C G L E K+ ++M D P+ V+K++ F K K EA +VF ++
Sbjct: 805 FNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQ 864
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKI 264
K+ + ++ M +G I
Sbjct: 865 QKKASQSATDRFSLLFTDMINKGLI 889
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/413 (22%), Positives = 187/413 (45%), Gaps = 24/413 (5%)
Query: 70 FAHNSITFNRMVD-IIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKM 127
F +++N ++D +I +++ + +EM + N T+ I + L+
Sbjct: 163 FMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMG 222
Query: 128 VNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKG 186
+ FF M GC ++ N ++ C+ + + EA K L L + + PN I+Y +I G
Sbjct: 223 LXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVING 282
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
C G + E S+I M+ + P + +I + + +A+ V VK
Sbjct: 283 LCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQAL-VLHAEMVKNGLSP 341
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
+ TY +I+ MCK G +++A L++M RG+ + T +++I G +G L++AY+++
Sbjct: 342 NVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIM 401
Query: 307 EEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
+E+ + P I Y+ LI G L R +A+ + +EMI+RG P + +Y ++ G
Sbjct: 402 KEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRN 461
Query: 363 RG------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY 410
+ KG P V + + GL K + + + +++ G+ Y
Sbjct: 462 QELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTY 521
Query: 411 NKFLHYYSNE----EGVVMFEEVGKKLREVGLADLADIFQRYGKKMATRERRR 459
++ Y E + + + +E+ +K + + + K+ T+E +R
Sbjct: 522 TSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKR 574
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 140/332 (42%), Gaps = 35/332 (10%)
Query: 70 FAHNSITFNRMVD---IIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELK 125
F IT+N +++ I+G+ + LQEM R + D ++ + +EL+
Sbjct: 409 FTPTIITYNALINGHCILGRMEDASGL---LQEMIERGFIPDVVSYSTIISGFCRNQELE 465
Query: 126 KMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLI 184
K M G + + +++ LC+++ + E L + LS + P+E+ Y LI
Sbjct: 466 KAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLI 525
Query: 185 KGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM------ 238
YC GDL +A ++ + M +GF P I + +I F K ++ EA ++ +
Sbjct: 526 NAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESV 585
Query: 239 --------RVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
+ ++L + ++ C +G +++A +LE M ++G + + + II
Sbjct: 586 PNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVII 645
Query: 291 YGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
+G G + +AY + +E+ P L K L + E Q+ +K C
Sbjct: 646 HGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLK-SCR 704
Query: 347 PTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIF 378
T +L G K G N D +F
Sbjct: 705 ITEAALAKVLIGINSKEG--------NMDAVF 728
>gi|334183891|ref|NP_177483.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806278|sp|Q9FX35.2|PP117_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g73400, mitochondrial; Flags: Precursor
gi|332197336|gb|AEE35457.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 568
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 101/461 (21%), Positives = 198/461 (42%), Gaps = 35/461 (7%)
Query: 26 LHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIG 85
+ +L + +LT +I + + FF + Q ++H I +N M+DI+
Sbjct: 112 MEKALDESSVDLTTPVVCKILQRLQYEEKTAFRFFTWAGH-QEHYSHEPIAYNEMIDILS 170
Query: 86 ----KSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMN------ 135
K++ + + L M R N+KT + + L +R+ + H+
Sbjct: 171 STKYKNKQFRIVIDMLDYMKR----NNKTVVLVDVLLEILRKYCERY-LTHVQKFAKRKR 225
Query: 136 -DCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLI 194
+ + N ++ LC+ LV E + L+ ++ +KP+ + L G+C V D
Sbjct: 226 IRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRVRDPK 285
Query: 195 EASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK--RMDDLGLSTYR 252
+A K+ M + G +P I+TF + DEA +F M K + T+
Sbjct: 286 KAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFA 345
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK- 311
++I + K K + + ++ M G D T +I G+ ++ EAYK ++E+
Sbjct: 346 LMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNK 405
Query: 312 ---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGP 368
PDI Y+ ++ L R+ EA +++ M++ C P++ TY ML+ G
Sbjct: 406 GYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGA 465
Query: 369 ----------DPLVNFDT--IFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHY 416
D + + +T + GL ++ +A +E V+N+G+++P ++ FL
Sbjct: 466 FNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMR 525
Query: 417 YSNEEGVVMFEEVGKKLREVGLADLADIFQRYGKKMATRER 457
S + +V + +++ +A F K+ +T+ R
Sbjct: 526 LSEVGNLKAIHKVSEHMKKFYNHSMARRFALSEKRKSTKLR 566
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 172/362 (47%), Gaps = 30/362 (8%)
Query: 97 LQEMG-RRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLC 154
++EM R DK TF + + L++ +K + +M G + + N ++ LC
Sbjct: 288 IEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLC 347
Query: 155 QRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSID 213
+ V EA ++ ++ E PN + Y +I C + EA+K+ ++T +G P +
Sbjct: 348 KLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVC 407
Query: 214 VVDKMIETFFKINKDDEAMKVFQMMRVK--RMDDLGLSTYRIVIDWMCKRGKISQAYTML 271
+ +I+ AM++++ M+ K D+ TY ++ID +C RGK+ +A +L
Sbjct: 408 TYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEF---TYNMLIDSLCFRGKLQEALNLL 464
Query: 272 EEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDIS----LYHGLIKGLLRL 327
+EM G + +T +++I G R+ EA ++ +++E +S Y+ LI GL +
Sbjct: 465 KEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKS 524
Query: 328 RRAREATQVFREMIKRGCEPTMHTYIMLLQ-----GHLGKR-------GRKGPDP-LVNF 374
R EA+Q+ +MI G P TY LL G + K G +P +V +
Sbjct: 525 ERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTY 584
Query: 375 DTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY----SNEEGVVMFEEVG 430
T+ + GL KAG+ A K + + +G+ + YN + ++E V +F E+
Sbjct: 585 GTL-IAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMI 643
Query: 431 KK 432
+K
Sbjct: 644 EK 645
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 143/294 (48%), Gaps = 11/294 (3%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWE-TLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFF 131
N++T+N ++ + K ++ + L G+ L + T+ + L R + +
Sbjct: 370 NTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELY 429
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDV 190
M GC N ++ +LC R + EA L+ ++ N I Y LI G+C
Sbjct: 430 KEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKN 489
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK--RMDDLGL 248
+ EA +I++ M +G + + +I+ K + +EA ++ M ++ R D
Sbjct: 490 KRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKF-- 547
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY ++ + CK G I +A +++ M G E D +T ++I GL GR+ A K++
Sbjct: 548 -TYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRT 606
Query: 309 IEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
I+ I+L Y+ +I+ L R +R++EA ++FREMI++ P TY ++ +G
Sbjct: 607 IQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRG 660
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 134/290 (46%), Gaps = 8/290 (2%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIM 134
T+N ++ + SRN + E +EM + D+ T+ + + +L +L++ +N M
Sbjct: 408 TYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEM 467
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDL 193
GC ++ N ++ C+ K + EA+ + ++ + + N + Y LI G C +
Sbjct: 468 EVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERV 527
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
EAS++ + M EG P + ++ F K +A + Q M + + TY
Sbjct: 528 EEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEP-DIVTYGT 586
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV----VEEI 309
+I +CK G++ A +L + +GI + +I L R R +EA ++ +E+
Sbjct: 587 LIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKA 646
Query: 310 EKPDISLYHGLIKGLLRLRRA-REATQVFREMIKRGCEPTMHTYIMLLQG 358
E PD Y + +GL + EA EM++RG P ++ ML +G
Sbjct: 647 EAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYMLAEG 696
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 143/310 (46%), Gaps = 13/310 (4%)
Query: 52 SWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMG-RRRLVNDKT 110
S ++LF Y QP F +S F ++ +GK+ D + L+EM ++++ +
Sbjct: 69 SSAVIHLF--YWASKQPNFKPSSSIFKEVLHKLGKAGEFDAMKDILKEMKISLSVIDNDS 126
Query: 111 FKIALMTLAEVRELKKMVNFFHIMN-DCGCEYSLEMLNKVVKTLCQ-RKL-VVEAKYLIL 167
+ + + A +++ F M + G + N ++ L KL +VE + +
Sbjct: 127 LLVFIESYASFGLYNEILQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNM 186
Query: 168 KLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINK 227
+S I+P+ + LIK C + A + M D G P +++ F +
Sbjct: 187 -VSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGN 245
Query: 228 DDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEM-FKRGIEADNLTL 286
D AM+V + M V+ + T ++++ CK G+I +A +EEM + G D T
Sbjct: 246 LDGAMRVKEQM-VEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTF 304
Query: 287 SSIIYGLLARGRLREAYKVVE----EIEKPDISLYHGLIKGLLRLRRAREATQVFREMIK 342
+ ++ GL G ++ A +V++ E PDI Y+ LI GL +L EA +V +MI+
Sbjct: 305 NMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIE 364
Query: 343 RGCEPTMHTY 352
R C P TY
Sbjct: 365 RDCSPNTVTY 374
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 118/269 (43%), Gaps = 43/269 (15%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEA 196
G + N ++K LC+ + A L+ ++ ++ + P+E + +++G+ + G+L A
Sbjct: 190 GIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGA 249
Query: 197 SKIWNLMTD------------------------------------EGFEPSIDVVDKMIE 220
++ M + EGF P + ++
Sbjct: 250 MRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVN 309
Query: 221 TFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIE 280
K A++V MM ++ D + TY +I +CK G++ +A +L +M +R
Sbjct: 310 GLSKTGHVKHALEVMDMM-LREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCS 368
Query: 281 ADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQV 336
+ +T ++II L ++ EA K+ + PD+ Y+ LI+GL R A ++
Sbjct: 369 PNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMEL 428
Query: 337 FREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
++EM +GC P TY ML+ L RG+
Sbjct: 429 YKEMKTKGCHPDEFTYNMLIDS-LCFRGK 456
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 117/267 (43%), Gaps = 39/267 (14%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVN 129
+ NS+T+N ++D + KS ++ + + +M L DK T+ L + ++KK +
Sbjct: 508 SRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAAD 567
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCD 189
M GCE P+ + YG LI G C
Sbjct: 568 IVQTMASDGCE----------------------------------PDIVTYGTLIAGLCK 593
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
G + A+K+ + +G + + +I+ F+ + EA+++F+ M +++ +
Sbjct: 594 AGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREM-IEKAEAPDAV 652
Query: 250 TYRIVIDWMCK-RGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY+IV +C+ G I +A + EM +RG + + + GL + + K+++
Sbjct: 653 TYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYMLAEGLFSLAMVGTLIKLIDM 712
Query: 309 I-EKPDISLYH-GLIKGLLRLRRAREA 333
+ EK S +I+G L++ + ++A
Sbjct: 713 VMEKAKFSDNEVTMIRGFLKISKYQDA 739
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 87/194 (44%), Gaps = 19/194 (9%)
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
+ST+ I+I +C+ +I A ++EEM G+ D T ++I+ G + G L A +V E
Sbjct: 195 VSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKE 254
Query: 308 EIEKPDI----SLYHGLIKGLLRLRRAREATQVFREM-IKRGCEPTMHTYIMLLQGHLGK 362
++ + + L+ G + R EA + EM ++ G P +T+ ML+ G L K
Sbjct: 255 QMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNG-LSK 313
Query: 363 RG-------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFD 409
G R+G DP + + GL K G+ +A K + +++ R
Sbjct: 314 TGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVT 373
Query: 410 YNKFLHYYSNEEGV 423
YN + E V
Sbjct: 374 YNTIISTLCKENQV 387
>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
Length = 1098
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/398 (23%), Positives = 172/398 (43%), Gaps = 45/398 (11%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMV 128
A N+ TFN +++ + K + E + +M + R D T++ ++ ++ +
Sbjct: 520 LAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRAS 579
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGY 187
+ + + G ++E N ++ K + ++ ++S + PN +AYG LI G+
Sbjct: 580 RILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGW 639
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ-MMRVKRMDDL 246
C GDL A ++ M ++G P++ + ++ F++ K DEA V Q ++ + D+
Sbjct: 640 CKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDI 699
Query: 247 GLS------------------------TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEAD 282
+ IVI +CK G+I A +L ++ +G AD
Sbjct: 700 SAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVAD 759
Query: 283 NLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFR 338
N T SS+I+G A G + A+ + + + P+I Y+ LI GL + A +F+
Sbjct: 760 NFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFK 819
Query: 339 EMIKRGCEPTMHTYIMLLQGHLGKRG-------------RKGPDPLVNFDTIFVGGLVKA 385
++ +G P TY L+ H K G +G P V +I + GL
Sbjct: 820 KLWTKGISPNAITYNTLIDKHC-KDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQ 878
Query: 386 GKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGV 423
G +A K +++++ V+ Y + Y E V
Sbjct: 879 GYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVRCESV 916
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 173/386 (44%), Gaps = 22/386 (5%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEM---GRRRLVNDKTFKIALMTLAEVRELKK 126
F+ ++ +F+ ++ + + +D + EM G R ++ ++ L LA+ +L
Sbjct: 169 FSFSAASFDLLLRALANAGQLDGALQVFDEMRTLGCR--LSMRSCNSILNRLAQTGDLGA 226
Query: 127 MVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIK 185
V F M G + + K C+ K VV A + ++++ ++ N +AY ++
Sbjct: 227 TVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMN 286
Query: 186 GYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD 245
GYC+VG +A ++ + + GF P+I +++ + +EA V Q +R +
Sbjct: 287 GYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLV 346
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
+ + + VI+ C+ G++ A +L EM ++ + + +I G GR+ EA+ +
Sbjct: 347 VDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNI 406
Query: 306 VEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG--H 359
+ E+ +PD Y+ L+ G + +A + + M++ G T TY LL+G
Sbjct: 407 LHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCS 466
Query: 360 LGKRG----------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFD 409
LG +KG P + + G K+GK+ A + + RG+
Sbjct: 467 LGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTT 526
Query: 410 YNKFLHYYSNEEGVVMFEEVGKKLRE 435
+N ++ E + EE+ K+++
Sbjct: 527 FNTVINGLCKIERMPEAEELVDKMKQ 552
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/428 (20%), Positives = 179/428 (41%), Gaps = 53/428 (12%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNID---LFWETLQEMGRRRLVNDKTFKIAL 115
F Y + FA ++T+N ++ +ID W + + G N+ + L
Sbjct: 439 FETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAP--NEISCSTLL 496
Query: 116 MTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IK 174
+ + +K +N + G + N V+ LC+ + + EA+ L+ K+ +W
Sbjct: 497 DGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCP 556
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+ I Y L GYC +GD+ AS+I N + + GF P+I+ + +I F + + +
Sbjct: 557 PDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDI 616
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
M + + ++ ++ W CK G + AY + EM ++G+ + SS++
Sbjct: 617 LFEMSNRGLSPNTVAYGALIAGW-CKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFY 675
Query: 295 ARGRLREAYKVVEEIEK----PDIS--------------------------LYHGLIKGL 324
+G+ EA V++ + PDIS +++ +I GL
Sbjct: 676 RKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGL 735
Query: 325 LRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG-------------RKGPDP- 370
+L R +A + ++ +G TY L+ G G G P
Sbjct: 736 CKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHG-CSASGFVDVAFDLRDTMLSVGLTPN 794
Query: 371 LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVG 430
+V ++++ + GL K+G+ A +++ +G+ YN + + + + ++
Sbjct: 795 IVTYNSL-IYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLK 853
Query: 431 KKLREVGL 438
+++ E G+
Sbjct: 854 QRMIEEGI 861
>gi|11120809|gb|AAG30989.1|AC012396_25 hypothetical protein [Arabidopsis thaliana]
Length = 466
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 101/461 (21%), Positives = 198/461 (42%), Gaps = 35/461 (7%)
Query: 26 LHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIG 85
+ +L + +LT +I + + FF + Q ++H I +N M+DI+
Sbjct: 10 MEKALDESSVDLTTPVVCKILQRLQYEEKTAFRFFTWAGH-QEHYSHEPIAYNEMIDILS 68
Query: 86 ----KSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMN------ 135
K++ + + L M R N+KT + + L +R+ + H+
Sbjct: 69 STKYKNKQFRIVIDMLDYMKR----NNKTVVLVDVLLEILRKYCERY-LTHVQKFAKRKR 123
Query: 136 -DCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLI 194
+ + N ++ LC+ LV E + L+ ++ +KP+ + L G+C V D
Sbjct: 124 IRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRVRDPK 183
Query: 195 EASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK--RMDDLGLSTYR 252
+A K+ M + G +P I+TF + DEA +F M K + T+
Sbjct: 184 KAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFA 243
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK- 311
++I + K K + + ++ M G D T +I G+ ++ EAYK ++E+
Sbjct: 244 LMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNK 303
Query: 312 ---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGP 368
PDI Y+ ++ L R+ EA +++ M++ C P++ TY ML+ G
Sbjct: 304 GYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGA 363
Query: 369 ----------DPLVNFDT--IFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHY 416
D + + +T + GL ++ +A +E V+N+G+++P ++ FL
Sbjct: 364 FNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMR 423
Query: 417 YSNEEGVVMFEEVGKKLREVGLADLADIFQRYGKKMATRER 457
S + +V + +++ +A F K+ +T+ R
Sbjct: 424 LSEVGNLKAIHKVSEHMKKFYNHSMARRFALSEKRKSTKLR 464
>gi|302798519|ref|XP_002981019.1| hypothetical protein SELMODRAFT_114007 [Selaginella moellendorffii]
gi|300151073|gb|EFJ17720.1| hypothetical protein SELMODRAFT_114007 [Selaginella moellendorffii]
Length = 448
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 136/287 (47%), Gaps = 22/287 (7%)
Query: 145 MLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
ML+ ++KT R EA ++ ++ + P+ + Y LI C +A K++++M
Sbjct: 121 MLDCLIKTGKTR----EASEVVGEMIKKSVPDGMTYTALISVLCKHNRADDAMKVFDIMV 176
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
++ P++DV ++ + K D A ++F M ++R STY +++ +C G+
Sbjct: 177 EKEIVPNVDVYTSLLAAHCRTRKLDGAYRLFVEM-IQRGYGPSASTYGLLLRCLCNGGRS 235
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA---YKVVEEIEKP--DISLYHG 319
AY + M RG D T +S+IYG GR+ EA +K V E EK D +Y+
Sbjct: 236 YLAYDIHSSMRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKAQLDAGIYNV 295
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG------------RKG 367
LI+GL R + EA +V M+ +GC PT+ TY L+ G KG
Sbjct: 296 LIEGLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRAMEEKG 355
Query: 368 PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
P + F+ GL K GK +A ++ ++ + RG YN +
Sbjct: 356 FSPNTMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALI 402
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 85/158 (53%), Gaps = 3/158 (1%)
Query: 154 CQRKLVVEAKYLILKLSEWIKPNEIA--YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPS 211
C + EAK L ++ E K A Y LI+G C + EA ++ M D+G P+
Sbjct: 265 CMAGRITEAKVLFKEVLEGEKAQLDAGIYNVLIEGLCRASKVEEALEVTAGMVDKGCIPT 324
Query: 212 IDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTML 271
+ + +I FFK N+ D+A+++F+ M K + Y ID +CK GKI++A+
Sbjct: 325 LQTYNALIMGFFKANEVDKALQLFRAMEEKGFSPNTM-IYSTFIDGLCKVGKINEAHEFF 383
Query: 272 EEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
++ +RG DN+T +++I GL R+ EA+++ E+
Sbjct: 384 QQSVERGCVPDNVTYNALIRGLFGANRMDEAHRLYREM 421
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 126/292 (43%), Gaps = 5/292 (1%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIM 134
+ + M+D + K+ E + EM ++ + + T+ + L + + F IM
Sbjct: 116 LAYKTMLDCLIKTGKTREASEVVGEMIKKSVPDGMTYTALISVLCKHNRADDAMKVFDIM 175
Query: 135 NDCGCEYSLEMLNKVVKTLCQ-RKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDL 193
+ ++++ ++ C+ RKL + + + P+ YG L++ C+ G
Sbjct: 176 VEKEIVPNVDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRS 235
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
A I + M G P + +I + EA +F+ + L Y +
Sbjct: 236 YLAYDIHSSMRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKAQLDAGIYNV 295
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK-- 311
+I+ +C+ K+ +A + M +G T +++I G + +A ++ +E+
Sbjct: 296 LIEGLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRAMEEKG 355
Query: 312 --PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG 361
P+ +Y I GL ++ + EA + F++ ++RGC P TY L++G G
Sbjct: 356 FSPNTMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGLFG 407
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 103/227 (45%), Gaps = 39/227 (17%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
L + + P+ +Y L++G + + +A + + M EG++P + +++ F ++ +
Sbjct: 2 LEDGVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKRV 61
Query: 229 DEAMKVFQMMRVK--------------------------RMDDLGLS--------TYRIV 254
E ++FQ + + D+ + Y+ +
Sbjct: 62 GEVCELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKTM 121
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV----VEEIE 310
+D + K GK +A ++ EM K+ + D +T +++I L R +A KV VE+
Sbjct: 122 LDCLIKTGKTREASEVVGEMIKKSV-PDGMTYTALISVLCKHNRADDAMKVFDIMVEKEI 180
Query: 311 KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
P++ +Y L+ R R+ A ++F EMI+RG P+ TY +LL+
Sbjct: 181 VPNVDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLR 227
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 167/382 (43%), Gaps = 21/382 (5%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALM-TLAEVRELKKMVNFFHIM 134
T+ +V+ + K +IDL L++M + ++ D ++ L + + +N F M
Sbjct: 222 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM 281
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDL 193
++ G ++ N +++ LC +A L+ + E I PN + + LI + G L
Sbjct: 282 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 341
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
+EA K+++ M +P I +I F ++ DEA +F++M K + TY
Sbjct: 342 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP-NVVTYNT 400
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV----VEEI 309
+I CK ++ + + EM +RG+ + +T +++I GL G A K+ V +
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460
Query: 310 EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR---- 365
PDI Y L+ GL + + +A VF + K EP ++TY ++++G + K G+
Sbjct: 461 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEG-MCKAGKVEDG 519
Query: 366 ---------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHY 416
KG P V T + G + G +A + G YN +
Sbjct: 520 WDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA 579
Query: 417 YSNEEGVVMFEEVGKKLREVGL 438
+ E+ K++R G
Sbjct: 580 RLRDGDKAASAELIKEMRSCGF 601
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 135/291 (46%), Gaps = 18/291 (6%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEA 196
GC+ L VV LC+R + A L+ K+ + I+ + + Y +I C+ ++ +A
Sbjct: 215 GCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDA 274
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVID 256
++ M ++G P++ + +I + +A ++ M ++R + + T+ +ID
Sbjct: 275 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM-IERKINPNVVTFSALID 333
Query: 257 WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE-EIEK---P 312
K GK+ +A + +EM KR I+ D T SS+I G RL EA + E I K P
Sbjct: 334 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 393
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------------L 360
++ Y+ LIKG + +R E ++FREM +RG TY L+QG
Sbjct: 394 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 453
Query: 361 GKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
K G P + +I + GL K GK A E + +E + YN
Sbjct: 454 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYN 504
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 172/389 (44%), Gaps = 48/389 (12%)
Query: 60 FQYTQKAQPCFAHNSITFNRMV-DIIGK-SRNI----------DLFWETLQEMGRRRLVN 107
F +KA P F+ + F+ D K SRN+ DLF E +Q R L +
Sbjct: 23 FAQLRKASPLFSLRGVYFSAASYDYREKLSRNVLLDLKLDDAVDLFGEMVQS---RPLPS 79
Query: 108 DKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLIL 167
F L +A++ + +++ M + Y L N ++ C+R + A ++
Sbjct: 80 IVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLG 139
Query: 168 KLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKIN 226
K+ + +P+ + L+ GYC + EA + + M ++P+ + +I F N
Sbjct: 140 KMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHN 199
Query: 227 KDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTL 286
K EA+ + M V R L TY V++ +CKRG I A ++L++M K IEAD +
Sbjct: 200 KASEAVALIDRM-VARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 258
Query: 287 SSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIK 342
++II L + +A + E++ +P++ Y+ LI+ L R +A+++ +MI+
Sbjct: 259 TTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 318
Query: 343 RGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
R P + T+ + + VK GK ++A K + ++ R
Sbjct: 319 RKINPNVVTF-----------------------SALIDAFVKEGKLVEAEKLYDEMIKRS 355
Query: 403 VEVPRFDY----NKFLHYYSNEEGVVMFE 427
++ F Y N F + +E MFE
Sbjct: 356 IDPDIFTYSSLINGFCMHDRLDEAKHMFE 384
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 132/279 (47%), Gaps = 9/279 (3%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N +TF+ ++D K + + EM +R + D T+ + L + + F
Sbjct: 324 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 383
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
+M C ++ N ++K C+ K V E L ++S+ + N + Y LI+G
Sbjct: 384 ELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQA 443
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
GD A KI+ M +G P I +++ K K ++A+ VF+ ++ +M+ + T
Sbjct: 444 GDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP-DIYT 502
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y I+I+ MCK GK+ + + + +G++ + + +++I G +G EA + E++
Sbjct: 503 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 562
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGC 345
+ P+ Y+ LI+ LR + ++ +EM R C
Sbjct: 563 EDGTLPNSGTYNTLIRARLRDGDKAASAELIKEM--RSC 599
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 114/246 (46%), Gaps = 17/246 (6%)
Query: 66 AQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVREL 124
++ CF N +T+N ++ K++ ++ E +EM +R LV N T+ + L + +
Sbjct: 388 SKDCFP-NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 446
Query: 125 KKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQ----RKLVVEAKYLILKLSEWIKPNEIAY 180
F M G + + ++ LC+ K +V +YL ++P+ Y
Sbjct: 447 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL---QKSKMEPDIYTY 503
Query: 181 GWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
+I+G C G + + ++ ++ +G +P++ + MI F + +EA +F+ M+
Sbjct: 504 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK- 562
Query: 241 KRMDDLGL---STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
+D L TY +I + G + + +++EM G D T+S +I +L G
Sbjct: 563 ---EDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVI-NMLHDG 618
Query: 298 RLREAY 303
RL ++Y
Sbjct: 619 RLEKSY 624
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 167/382 (43%), Gaps = 21/382 (5%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALM-TLAEVRELKKMVNFFHIM 134
T+ +V+ + K +IDL L++M + ++ D ++ L + + +N F M
Sbjct: 206 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM 265
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDL 193
++ G ++ N +++ LC +A L+ + E I PN + + LI + G L
Sbjct: 266 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 325
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
+EA K+++ M +P I +I F ++ DEA +F++M K + TY
Sbjct: 326 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP-NVVTYNT 384
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV----VEEI 309
+I CK ++ + + EM +RG+ + +T +++I GL G A K+ V +
Sbjct: 385 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 444
Query: 310 EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR---- 365
PDI Y L+ GL + + +A VF + K EP ++TY ++++G + K G+
Sbjct: 445 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEG-MCKAGKVEDG 503
Query: 366 ---------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHY 416
KG P V T + G + G +A + G YN +
Sbjct: 504 WDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA 563
Query: 417 YSNEEGVVMFEEVGKKLREVGL 438
+ E+ K++R G
Sbjct: 564 RLRDGDKAASAELIKEMRSCGF 585
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 135/291 (46%), Gaps = 18/291 (6%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEA 196
GC+ L VV LC+R + A L+ K+ + I+ + + Y +I C+ ++ +A
Sbjct: 199 GCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDA 258
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVID 256
++ M ++G P++ + +I + +A ++ M ++R + + T+ +ID
Sbjct: 259 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM-IERKINPNVVTFSALID 317
Query: 257 WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE-EIEK---P 312
K GK+ +A + +EM KR I+ D T SS+I G RL EA + E I K P
Sbjct: 318 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 377
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------------L 360
++ Y+ LIKG + +R E ++FREM +RG TY L+QG
Sbjct: 378 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 437
Query: 361 GKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
K G P + +I + GL K GK A E + +E + YN
Sbjct: 438 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYN 488
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 172/389 (44%), Gaps = 48/389 (12%)
Query: 60 FQYTQKAQPCFAHNSITFNRMV-DIIGK-SRNI----------DLFWETLQEMGRRRLVN 107
F +KA P F+ + F+ D K SRN+ DLF E +Q R L +
Sbjct: 7 FAQLRKASPLFSLRGVYFSAASYDYREKLSRNVLLDLKLDDAVDLFGEMVQS---RPLPS 63
Query: 108 DKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLIL 167
F L +A++ + +++ M + Y L N ++ C+R + A ++
Sbjct: 64 IVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLG 123
Query: 168 KLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKIN 226
K+ + +P+ + L+ GYC + EA + + M ++P+ + +I F N
Sbjct: 124 KMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHN 183
Query: 227 KDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTL 286
K EA+ + M V R L TY V++ +CKRG I A ++L++M K IEAD +
Sbjct: 184 KASEAVALIDRM-VARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 242
Query: 287 SSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIK 342
++II L + +A + E++ +P++ Y+ LI+ L R +A+++ +MI+
Sbjct: 243 TTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 302
Query: 343 RGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
R P + T+ + + VK GK ++A K + ++ R
Sbjct: 303 RKINPNVVTF-----------------------SALIDAFVKEGKLVEAEKLYDEMIKRS 339
Query: 403 VEVPRFDY----NKFLHYYSNEEGVVMFE 427
++ F Y N F + +E MFE
Sbjct: 340 IDPDIFTYSSLINGFCMHDRLDEAKHMFE 368
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 132/279 (47%), Gaps = 9/279 (3%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N +TF+ ++D K + + EM +R + D T+ + L + + F
Sbjct: 308 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 367
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
+M C ++ N ++K C+ K V E L ++S+ + N + Y LI+G
Sbjct: 368 ELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQA 427
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
GD A KI+ M +G P I +++ K K ++A+ VF+ ++ +M+ + T
Sbjct: 428 GDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP-DIYT 486
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y I+I+ MCK GK+ + + + +G++ + + +++I G +G EA + E++
Sbjct: 487 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 546
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGC 345
+ P+ Y+ LI+ LR + ++ +EM R C
Sbjct: 547 EDGTLPNSGTYNTLIRARLRDGDKAASAELIKEM--RSC 583
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 114/246 (46%), Gaps = 17/246 (6%)
Query: 66 AQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVREL 124
++ CF N +T+N ++ K++ ++ E +EM +R LV N T+ + L + +
Sbjct: 372 SKDCFP-NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 430
Query: 125 KKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQ----RKLVVEAKYLILKLSEWIKPNEIAY 180
F M G + + ++ LC+ K +V +YL ++P+ Y
Sbjct: 431 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL---QKSKMEPDIYTY 487
Query: 181 GWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
+I+G C G + + ++ ++ +G +P++ + MI F + +EA +F+ M+
Sbjct: 488 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK- 546
Query: 241 KRMDDLGL---STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
+D L TY +I + G + + +++EM G D T+S +I +L G
Sbjct: 547 ---EDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVI-NMLHDG 602
Query: 298 RLREAY 303
RL ++Y
Sbjct: 603 RLEKSY 608
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 162/388 (41%), Gaps = 73/388 (18%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIM 134
TFN M+ + K + W EM R ++ + TF I + L + +LKK +F M
Sbjct: 203 TFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSM 262
Query: 135 NDCGCEYSLEMLNKVVKTLCQR------KLVV---------------------------- 160
+ G + ++ N V+ C R ++V+
Sbjct: 263 ENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKL 322
Query: 161 -EAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKM 218
EA ++ K+ E + P + Y LI GYC+ GDL++A + M P++ + +
Sbjct: 323 EEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLL 382
Query: 219 IETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEM 274
I F K DEA + +K M D G+ TY I+I+ C+ G +A+ + +EM
Sbjct: 383 IHALFLEGKMDEADGM-----IKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEM 437
Query: 275 FKRGIEADNLTLSSIIYGLLARGRLREA----YKVVEEIEKPDISLYHGLIKGLLRLRRA 330
+GI+ +T +S+IY L R R++ A K++ E PD+ +++ LI G
Sbjct: 438 ISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNL 497
Query: 331 REATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLD 390
A + +EM KR P TY L+QG + GK +
Sbjct: 498 DRAFALLKEMDKRNIVPDEVTYNTLMQGR-----------------------CREGKVEE 534
Query: 391 AAKYVERVMNRGVEVPRFDYNKFLHYYS 418
A + ++ + RG+ YN + YS
Sbjct: 535 ARELLKEMKRRGIRPDHISYNTLISGYS 562
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 126/272 (46%), Gaps = 51/272 (18%)
Query: 141 YSLEMLNK-VVKTLCQRKLVVEAKYLILKLSE-----------WIKPNEIAYGWLIKGYC 188
Y EM+ + ++ T+ L++ A +L K+ E I P+ I Y LI GYC
Sbjct: 363 YRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYC 422
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM---------- 238
G+ +A + + M +G +P++ +I K N+ A +F+ +
Sbjct: 423 RCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLI 482
Query: 239 --------------------RVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEM 274
+K MD + TY ++ C+ GK+ +A +L+EM
Sbjct: 483 MFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEM 542
Query: 275 FKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRA 330
+RGI D+++ +++I G RG + +A+ + +E+ P + Y+ LI+GL + ++
Sbjct: 543 KRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQG 602
Query: 331 REATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
A ++ +EM+ +G P TY L++G +GK
Sbjct: 603 DLAEELLKEMVSKGITPDDSTYFSLIEG-IGK 633
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 128/259 (49%), Gaps = 19/259 (7%)
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
+ I + LI+ C++ +A + +++M ++G P I+ + M+ F K+N+ + ++
Sbjct: 165 SSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLY 224
Query: 236 -QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
+M R+K + T+ I+I+ +CK GK+ +A + M G++ + +T +++I+G
Sbjct: 225 AEMFRLKIKSTV--YTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYC 282
Query: 295 ARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
+RGR+ A V++ ++ +PD Y LI G+ + + EA+ + +M + G PT
Sbjct: 283 SRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAV 342
Query: 351 TYIMLLQGHLGKRG------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERV 398
TY L+ G+ K R+ P V+ + + L GK +A ++ +
Sbjct: 343 TYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDM 402
Query: 399 MNRGVEVPRFDYNKFLHYY 417
+ G+ YN ++ Y
Sbjct: 403 GDSGIVPDSITYNILINGY 421
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 121/268 (45%), Gaps = 11/268 (4%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIM 134
T+N ++ + +D +++MG +V D T+ I + KK N M
Sbjct: 378 TYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEM 437
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDL 193
G + +L ++ L +R + A L K+ E P+ I + LI G+C G+L
Sbjct: 438 ISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNL 497
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK--RMDDLGLSTY 251
A + M P + +++ + K +EA ++ + M+ + R D + +Y
Sbjct: 498 DRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHI---SY 554
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL--ARGRLREAY--KVVE 307
+I KRG I+ A+T+ +EM G LT +++I GL +G L E ++V
Sbjct: 555 NTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVS 614
Query: 308 EIEKPDISLYHGLIKGLLRLRRAREATQ 335
+ PD S Y LI+G+ ++ + EA+
Sbjct: 615 KGITPDDSTYFSLIEGIGKVDDSSEASD 642
>gi|449494995|ref|XP_004159705.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Cucumis sativus]
Length = 488
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 179/401 (44%), Gaps = 32/401 (7%)
Query: 33 CN-FNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNID 91
CN L+H+ ++ F W+ F++ + F H ++ ++D +GK++ +
Sbjct: 66 CNSIQLSHDLVYKLLQRFKDDWKSALGVFRWAESLSG-FKHTPDLYDILIDTLGKTKQLV 124
Query: 92 LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVK 151
L+EM RLV T A+ A + + V F + G E + E +N ++
Sbjct: 125 KMRGMLEEMKEARLVTLDTVAKAMRRFAGAGQWENAVRIFDDLETYGLEKNTESMNVLLD 184
Query: 152 TLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPS 211
TLC+ K V +A+ + L+L I PN + I G+C V + EA M G P
Sbjct: 185 TLCKEKKVEKARQMYLELKSHIAPNANTFNMFIHGWCKVNKIDEAHWTLEEMKGYGHRPC 244
Query: 212 IDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQA 267
+ +I F ++ + KV++++ MD G TY ++ + K + +A
Sbjct: 245 VISYSTII--LFYCHRCN-FNKVYELL--DEMDAQGCPANVITYTTIMCSLTKSEEFEEA 299
Query: 268 YTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE-EIEK----PDISLYHGLIK 322
+ E M G E D L + +I+ L G++REA V E E+ P+ S Y+ +I
Sbjct: 300 LQIAERMKSAGYEPDTLFYNCLIHTLGRAGKVREAIHVFEVEMPSKSVLPNTSTYNSMIA 359
Query: 323 GLLRLRRAREATQVFREMIK-RGCEPTMHTYIMLLQG--HLGKRGRKGPDPL-------- 371
R R +A ++ EM K C+P + TY LL+ GK + L
Sbjct: 360 MYCRRAREEKAMKLLEEMQKSEHCKPDVQTYYPLLKSCFRTGKTDYDLSNLLDEMINKHH 419
Query: 372 ----VNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRF 408
++ ++ + GL +A K A + E+++++ ++ PR+
Sbjct: 420 LSLDISTYSLLIHGLCRANKCDWAYQLFEKMISQDIK-PRY 459
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 97/224 (43%), Gaps = 9/224 (4%)
Query: 67 QPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELK 125
+PC I+++ ++ N + +E L EM + N T+ + +L + E +
Sbjct: 242 RPCV----ISYSTIILFYCHRCNFNKVYELLDEMDAQGCPANVITYTTIMCSLTKSEEFE 297
Query: 126 KMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYL--ILKLSEWIKPNEIAYGWL 183
+ + M G E N ++ TL + V EA ++ + S+ + PN Y +
Sbjct: 298 EALQIAERMKSAGYEPDTLFYNCLIHTLGRAGKVREAIHVFEVEMPSKSVLPNTSTYNSM 357
Query: 184 IKGYCDVGDLIEASKIWNLMT-DEGFEPSIDVVDKMIETFFKINKDD-EAMKVFQMMRVK 241
I YC +A K+ M E +P + ++++ F+ K D + + M K
Sbjct: 358 IAMYCRRAREEKAMKLLEEMQKSEHCKPDVQTYYPLLKSCFRTGKTDYDLSNLLDEMINK 417
Query: 242 RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
L +STY ++I +C+ K AY + E+M + I+ LT
Sbjct: 418 HHLSLDISTYSLLIHGLCRANKCDWAYQLFEKMISQDIKPRYLT 461
>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 793
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 143/315 (45%), Gaps = 8/315 (2%)
Query: 56 VYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIA 114
V L F Y Q ++H+ + + M+D++ K++ L+ M RR + + F
Sbjct: 182 VALNFFYWADRQWRYSHHPVVYYTMLDVLSKTKLCQGARRVLRLMTRRGIECPPEAFGYV 241
Query: 115 LMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQ-RKLVVEAKYLILKLSEWI 173
+++ + +L+ + +M G E SL + N + L + KL K+L I
Sbjct: 242 MVSYSRAGKLRNALRVLTLMQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGI 301
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
KP+ + Y LIKGYCD+ + +A ++ + +G P ++ K K +E
Sbjct: 302 KPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKC 361
Query: 234 VFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
+ + M TY +I + K G A L+E +G D + S+I++
Sbjct: 362 LMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSF 421
Query: 294 LARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
+GR+ EA +V ++ PD+ Y ++ G RL R EA ++ ++M K GC+P
Sbjct: 422 CQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNT 481
Query: 350 HTYIMLLQG--HLGK 362
+Y LL G H GK
Sbjct: 482 VSYTALLNGLCHSGK 496
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 127/286 (44%), Gaps = 7/286 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKT-FKIALMTLAEVRELKKMVNFF 131
+ +T+N ++ ++ K + D L+E + DK + + + + + + +
Sbjct: 375 DQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLV 434
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
M GC + +V C+ + EAK ++ ++ KPN ++Y L+ G C
Sbjct: 435 IDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHS 494
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G +EA ++ N+ + + P+ ++ + K EA + + M K +
Sbjct: 495 GKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEI 554
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI- 309
++I +C+ K+ +A LEE +G + + +++I+G G + A V++++
Sbjct: 555 -NLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMY 613
Query: 310 ---EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
+ PD Y L L + R EA ++ +M+ +G +PT TY
Sbjct: 614 LSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTY 659
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 100/209 (47%), Gaps = 8/209 (3%)
Query: 146 LNKVVKTLCQRKLVVEAK-YLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
+N ++++LCQ + VVEAK YL L++ N + + +I G+C +GD+ A + + M
Sbjct: 554 INLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMY 613
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
G P + + K + DEA ++ M K +D + TYR VI + G++
Sbjct: 614 LSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPV-TYRSVIHRYSQWGRV 672
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGL 320
+LE+M KR + + +I L G L EA K++ ++ K D + H L
Sbjct: 673 DDMLNLLEKMLKR--QPFRTVYNQVIEKLCDFGNLEEAEKLLGKVLRTASKVDANTCHVL 730
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTM 349
++ L+ A A +V M +R P +
Sbjct: 731 MESYLKKGVAISAYKVACRMFRRNLTPDL 759
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 90/222 (40%), Gaps = 58/222 (26%)
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADN----------------------LTL-- 286
Y ++D + K A +L M +RGIE LTL
Sbjct: 203 YYTMLDVLSKTKLCQGARRVLRLMTRRGIECPPEAFGYVMVSYSRAGKLRNALRVLTLMQ 262
Query: 287 -----------SSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAR 331
++ IY L+ G+L +A K +E ++ KPDI Y+ LIKG L R
Sbjct: 263 KAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNRIE 322
Query: 332 EATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKG----------------PDPLVNFD 375
+A ++ + +GC P +Y ++ G L K + PD V ++
Sbjct: 323 DALELIAGLPSKGCPPDKVSYYTVM-GFLCKEKKIEEVKCLMEKMVWNSNLIPDQ-VTYN 380
Query: 376 TIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
T+ + L K G + DA +++ ++G + + Y+ +H +
Sbjct: 381 TL-IHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSF 421
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 52/116 (44%), Gaps = 12/116 (10%)
Query: 316 LYHGLIKGLLRLRRAREATQVFREMIKRG--CEPTMHTYIMLLQGHLGK----------R 363
+Y+ ++ L + + + A +V R M +RG C P Y+M+ GK
Sbjct: 202 VYYTMLDVLSKTKLCQGARRVLRLMTRRGIECPPEAFGYVMVSYSRAGKLRNALRVLTLM 261
Query: 364 GRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN 419
+ G +P ++ + LVK GK A K++ER+ G++ YN + Y +
Sbjct: 262 QKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCD 317
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 147/302 (48%), Gaps = 7/302 (2%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVN 129
A + +N +++ + K +D MG + L ND T+ I + + + +L ++
Sbjct: 352 APSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALH 411
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYC 188
F M + G + ++ + ++ C+ + AK L ++ + +KPN + Y LI GYC
Sbjct: 412 FLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYC 471
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
G+L A ++++ MT +G P+ +I N+ EA K+F M V+
Sbjct: 472 KEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEM-VEWNVIPNE 530
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY ++I+ CK G +A+ +L+EM ++G+ D T +I GL + GR+ EA + + +
Sbjct: 531 VTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMND 590
Query: 309 IEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
++ L + L+ G + R +A REM+ RG + Y +L+ G L ++
Sbjct: 591 LQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQD 650
Query: 365 RK 366
R+
Sbjct: 651 RR 652
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 148/347 (42%), Gaps = 22/347 (6%)
Query: 111 FKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS 170
+ + +L E+++ + M GC+ S+ N ++ LC+ + V EA + LS
Sbjct: 218 YTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLS 277
Query: 171 -EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD 229
+ ++ + Y L+ G C V + ++ N M + GF PS V +++ K
Sbjct: 278 YKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIG 337
Query: 230 EAMKVFQMMRVKRMD-DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
A + +VK+ L Y +I+ MCK GK+ +A ++ M +G+ +++T S
Sbjct: 338 SAFDLVN--KVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSI 395
Query: 289 IIYGLLARGRLREAY----KVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+I RG+L A K+ E K + Y LI G +L + R A +F EMI G
Sbjct: 396 LIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANG 455
Query: 345 CEPTMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDA 391
+P + Y L+ G+ K G KG P T + GL A + +A
Sbjct: 456 LKPNVVIYTSLISGYC-KEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEA 514
Query: 392 AKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
K ++ V YN + + E V E+ ++ E GL
Sbjct: 515 NKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGL 561
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 138/317 (43%), Gaps = 21/317 (6%)
Query: 122 RELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAY 180
REL +V +M DCG + L+ V+ L + + A +L ++ S ++P+ Y
Sbjct: 160 RELDGLV-VVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVY 218
Query: 181 GWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
+++ C++ D I A ++ M G + S+ + I K + EA+++ ++
Sbjct: 219 TAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSY 278
Query: 241 KRM-DDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
K + D+G TY ++ +CK + M+ EM + G +S+++ GL +G +
Sbjct: 279 KGLRADVG--TYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNI 336
Query: 300 REAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
A+ +V +++K P + +Y+ LI + + + EA +F M +G P TY +L
Sbjct: 337 GSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSIL 396
Query: 356 LQG------------HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
+ LGK G V + + G K GK A + ++ G+
Sbjct: 397 IDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGL 456
Query: 404 EVPRFDYNKFLHYYSNE 420
+ Y + Y E
Sbjct: 457 KPNVVIYTSLISGYCKE 473
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 98/225 (43%), Gaps = 37/225 (16%)
Query: 171 EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDE 230
+ ++P+ + Y +I G+L A +W++M EG P++ +I KI D+
Sbjct: 664 QGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDK 723
Query: 231 AMKVFQMM--------------------------RVKRMDDLGLS-------TYRIVIDW 257
A + + M + ++ D+ L TY I+I
Sbjct: 724 AELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRG 783
Query: 258 MCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPD 313
CK G+I +A +L M GI D ++ S+IIY RG L+EA K+ E + PD
Sbjct: 784 FCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPD 843
Query: 314 ISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
Y+ LI G +A ++ +M++RG +P TY L+ G
Sbjct: 844 TVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHG 888
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 65/158 (41%), Gaps = 19/158 (12%)
Query: 312 PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------------ 359
P I G++ GL+R+R+ R A +F E++ G P ++ Y +++
Sbjct: 178 PQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREV 237
Query: 360 LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL----- 414
+G+ G D V +F+ GL K + +A + + +G+ Y +
Sbjct: 238 IGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCK 297
Query: 415 --HYYSNEEGVVMFEEVGKKLREVGLADLADIFQRYGK 450
+ + EE + E G E +++L D ++ G
Sbjct: 298 VEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGN 335
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 162/362 (44%), Gaps = 20/362 (5%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHI 133
+ F +++ ++ + DL Q+M R+++ D +F I + +L ++ F
Sbjct: 80 VDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGK 139
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWI-KPNEIAYGWLIKGYCDVGD 192
+ G + ++ LC V EA L ++ E +PN + + L+ G C G
Sbjct: 140 ITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGR 199
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
++EA + + M ++G +P+ +++ K A+ + + M + Y
Sbjct: 200 IVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYS 259
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK- 311
+ID +CK G+ S A + EM ++GI D T +S+I G + GR +A ++++E+ +
Sbjct: 260 AIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER 319
Query: 312 ---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR----- 363
PD+ Y+ LI ++ + EA +++ EM+ RG P TY ++ G +
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAA 379
Query: 364 -------GRKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
KG P L+ F+T+ + G A + D + + + G+ YN +H
Sbjct: 380 EHMFYLMATKGCSPNLITFNTL-IDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIH 438
Query: 416 YY 417
+
Sbjct: 439 GF 440
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 137/300 (45%), Gaps = 16/300 (5%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHI 133
+T+N +++ K E EM R ++ N T+ + + L + F++
Sbjct: 326 VTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYL 385
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M GC +L N ++ C K + + L+ +++E + + Y LI G+ VGD
Sbjct: 386 MATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGD 445
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD-------- 244
L A + M G P I D +++ K +A+++F++M+ + D
Sbjct: 446 LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFN 505
Query: 245 --DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
+ + TY I+I + GK +A + EEM RGI D +T SS+I GL + RL EA
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 303 YKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
++ + + P++ + LI G + R + ++F EM +RG TYI L+ G
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICG 625
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 140/332 (42%), Gaps = 24/332 (7%)
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGY 187
N F M + G L N ++ C +A+ L+ ++ E I P+ + Y LI +
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAF 335
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
G EA ++++ M G P+ MI+ F K N+ D A +F +M K
Sbjct: 336 VKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP-N 394
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
L T+ +ID C +I +L EM + G+ AD T +++I+G G L A +++
Sbjct: 395 LITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQ 454
Query: 308 EIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE-PTMHTYIMLLQGHLGK 362
E+ PDI L+ GL + ++A ++F+ M K + H +
Sbjct: 455 EMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPF---------- 504
Query: 363 RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE-- 420
G +P V I + GL+ GK L+A + E + +RG+ Y+ + +
Sbjct: 505 ---NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561
Query: 421 --EGVVMFEEVGKKLREVGLADLADIFQRYGK 450
E MF+ +G K + + Y K
Sbjct: 562 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCK 593
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 108/235 (45%), Gaps = 18/235 (7%)
Query: 147 NKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
+ ++ C++ + A+++ L ++ PN I + LI GYC + + ++ + MT+
Sbjct: 364 SSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTE 423
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKIS 265
G + +I F+ + + A+ + Q M + + T ++D +C GK+
Sbjct: 424 TGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCP-DIVTCDTLLDGLCDNGKLK 482
Query: 266 QAYTMLEEMFK-----------RGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK--- 311
A M + M K G+E D T + +I GL+ G+ EA ++ EE+
Sbjct: 483 DALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542
Query: 312 -PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
PD Y +I GL + R EATQ+F M + P + T+ L+ G+ K GR
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYC-KAGR 596
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 125/296 (42%), Gaps = 19/296 (6%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKT-FKIALMTLAE 120
Y + C + N ITFN ++D ++ ID E L EM LV D T + +
Sbjct: 384 YLMATKGC-SPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYL 442
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA--KYLILKLSE------- 171
V +L ++ M G + + ++ LC + +A + +++ S+
Sbjct: 443 VGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASH 502
Query: 172 ---WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++P+ Y LI G + G +EA +++ M G P MI+ K ++
Sbjct: 503 PFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 562
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
DEA ++F M K + T+ +I+ CK G++ + EM +RGI A+ +T +
Sbjct: 563 DEATQMFDSMGSKSFSP-NVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYIT 621
Query: 289 IIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREM 340
+I G G + A + +E+ PD ++ GL + A + ++
Sbjct: 622 LICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
>gi|414884149|tpg|DAA60163.1| TPA: hypothetical protein ZEAMMB73_830458 [Zea mays]
Length = 378
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 144/321 (44%), Gaps = 22/321 (6%)
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYC 188
F MN GC+ L +LN + + + V + + + + + P+ +Y LI G
Sbjct: 11 IFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLT 70
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
G E S I++ M GF + +++ F K K D+A + + M+VK + +
Sbjct: 71 KAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVKHVPPT-V 129
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
+TY +ID + K ++ +AY + EE +GIE + + SS+I G GR+ EAY ++EE
Sbjct: 130 ATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEE 189
Query: 309 IEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG------ 358
+ K P++ ++ L+ L++ EA F+ M + C P +TY +L+ G
Sbjct: 190 MMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQK 249
Query: 359 ------HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNK 412
+ ++G P V T + GL K G DA ER G +N
Sbjct: 250 YNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVGNITDACSLFERFKANGGIPDAASFNA 309
Query: 413 FLHYYSNE----EGVVMFEEV 429
+ S+ E +FEE
Sbjct: 310 LIEGMSHANRAIEAYHVFEET 330
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 134/297 (45%), Gaps = 40/297 (13%)
Query: 67 QPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELK 125
Q FA ++ +N +VD KS +D +E L+EM + + T+ + LA++ L
Sbjct: 87 QRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVKHVPPTVATYGSIIDGLAKIDRLD 146
Query: 126 KMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIK 185
+ F EAK S+ I+ N I Y LI
Sbjct: 147 EAYMLFE----------------------------EAK------SKGIELNVIVYSSLID 172
Query: 186 GYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD 245
G+ VG + EA I M +G P++ + +++ K + +EA+ FQ M+ +
Sbjct: 173 GFGKVGRIDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSP 232
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
TY I+I+ +C+ K ++A+ +EM K+G+ + +T +++I GL G + +A +
Sbjct: 233 -NTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVGNITDACSL 291
Query: 306 VEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
E + PD + ++ LI+G+ RA EA VF E RGC + I LL
Sbjct: 292 FERFKANGGIPDAASFNALIEGMSHANRAIEAYHVFEETRLRGCRINVKACISLLDA 348
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 129/276 (46%), Gaps = 19/276 (6%)
Query: 179 AYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
AY ++ G+C G + +A + M + P++ +I+ KI++ DEA +F+
Sbjct: 96 AYNAVVDGFCKSGKVDKAYEALEEMKVKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEA 155
Query: 239 RVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR 298
+ K ++ L + Y +ID K G+I +AY +LEEM K+G+ + T +S++ L+
Sbjct: 156 KSKGIE-LNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEE 214
Query: 299 LREA---YKVVEEIE-KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIM 354
+ EA ++ ++E++ P+ Y LI GL R+++ +A ++EM K+G P + TY
Sbjct: 215 INEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTT 274
Query: 355 LLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNR 401
++ G L K G G P + G+ A ++++A E R
Sbjct: 275 MISG-LAKVGNITDACSLFERFKANGGIPDAASFNALIEGMSHANRAIEAYHVFEETRLR 333
Query: 402 GVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVG 437
G + L + E + VG LRE+
Sbjct: 334 GCRINVKACISLLDALNKAECIEQAAVVGAVLREIA 369
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 82/193 (42%), Gaps = 22/193 (11%)
Query: 261 RGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISL 316
G+ + + +EM +RG + D L++ + + G + + + E+I+ PD+
Sbjct: 2 HGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRS 61
Query: 317 YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR----------- 365
Y LI GL + +ARE + +F M +RG Y ++ G K G+
Sbjct: 62 YSILIHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDG-FCKSGKVDKAYEALEEM 120
Query: 366 --KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN---- 419
K P V + GL K + +A E ++G+E+ Y+ + +
Sbjct: 121 KVKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRI 180
Query: 420 EEGVVMFEEVGKK 432
+E ++ EE+ KK
Sbjct: 181 DEAYLILEEMMKK 193
>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
Length = 700
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 110/430 (25%), Positives = 175/430 (40%), Gaps = 91/430 (21%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRR-RLVNDKTFKIALMT 117
FFQ+ K Q + HN+ + M+DI+G+++ LQ+M + R + +M+
Sbjct: 202 FFQWADK-QEGYDHNTDAYFTMIDILGRAKMFTELQSLLQKMQTQGREITRSMLHSFVMS 260
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNE 177
K+ + F++M + G E L + T LV K L ++E +
Sbjct: 261 YGRSGRFKESLEAFNLMKEMGYEPGL------IDTAYNSVLVSLVKNKKLDMAENL---- 310
Query: 178 IAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQM 237
+ +I +L S I E E ++ ++D MI+ + +
Sbjct: 311 --FAQMINNGVSCNNLTYTSMIQCFFLKEKMEDAMKLLDDMIQNNYAPD----------- 357
Query: 238 MRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
+ TY IVI +CKR I QAY +L++M + G E + T +++I GL A
Sbjct: 358 ----------VVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVR 407
Query: 298 RLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYI 353
R EA ++V +E+ P+I Y L GL +LRR A ++F E + RG +P TY
Sbjct: 408 RPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYN 467
Query: 354 MLLQGHL-GKR--------------------------------GRKGPDPL--------- 371
LL G+ G R G + PD L
Sbjct: 468 TLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENK 527
Query: 372 ---VNFDT--IFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN-----EE 421
VNFDT I GL + G DA+ + R+ +RG DY +H S E
Sbjct: 528 GYDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEA 587
Query: 422 GVVMFEEVGK 431
+++E + K
Sbjct: 588 QALLYEMINK 597
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 102/444 (22%), Positives = 180/444 (40%), Gaps = 80/444 (18%)
Query: 16 YQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWR------PVYLFF--------- 60
+ +QY+P ++ +CN + H+ F + NNF R +YL F
Sbjct: 68 FHRQYTPTTK------TCNNSSRHDTFTKSHNNFSRYHRFVSANTSLYLLFCHVGAVDIY 121
Query: 61 --QYTQK--------------AQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRR 104
+Y K A T N++ I + + WE LQ+
Sbjct: 122 QRKYPTKNGFNPSKSLRAKASANALVVQQEDTVNKICKAIEEDQ-----WECLQDNFLNS 176
Query: 105 LVNDKTFKIALMTLAEVRELKKMVNFFHIMNDC-GCEYSLEMLNKVVKTLCQRKLVVEAK 163
+ D + L + + + FF + G +++ + ++ L + K+ E +
Sbjct: 177 MAQDLNPDAVVKVLNLQTDAQNALRFFQWADKQEGYDHNTDAYFTMIDILGRAKMFTELQ 236
Query: 164 YLILKLSEWIKPNEIAYGWL---IKGYCDVGDLIEASKIWNLMTDEGFEPS-IDVV-DKM 218
L+ K+ + EI L + Y G E+ + +NLM + G+EP ID + +
Sbjct: 237 SLLQKMQ--TQGREITRSMLHSFVMSYGRSGRFKESLEAFNLMKEMGYEPGLIDTAYNSV 294
Query: 219 IETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRG 278
+ + K K D A +F M + L TY +I + K+ A +L++M +
Sbjct: 295 LVSLVKNKKLDMAENLFAQMINNGVSCNNL-TYTSMIQCFFLKEKMEDAMKLLDDMIQNN 353
Query: 279 IEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREAT 334
D +T + +I L R + +AY V++++ + P+I Y+ LI+GL +RR EA
Sbjct: 354 YAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEAL 413
Query: 335 QVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKY 394
++ M + G P ++TY TI GL K + LD AK
Sbjct: 414 ELVTLMEQGGVPPNIYTY-----------------------TILTHGLCKL-RRLDRAKE 449
Query: 395 V-ERVMNRGVEVPRFDYNKFLHYY 417
+ + RG++ R YN L+ Y
Sbjct: 450 MFNEALARGLKPNRVTYNTLLNGY 473
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 1/131 (0%)
Query: 106 VNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYL 165
VN T I LA V K F+ M D G YS + L + EA+ L
Sbjct: 531 VNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQAL 590
Query: 166 ILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFK 224
+ ++ ++ PN Y +IKG+C G L +A + N M + G P + +I+ F
Sbjct: 591 LYEMINKGYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNILIKEFHN 650
Query: 225 INKDDEAMKVF 235
+ +A +++
Sbjct: 651 QGRTQDADQLY 661
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 61/311 (19%), Positives = 124/311 (39%), Gaps = 52/311 (16%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWE--TLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNF 130
N T+N ++ + R + E TL E G N T+ I L ++R L +
Sbjct: 392 NIYTYNALIQGLCAVRRPEEALELVTLMEQGGVP-PNIYTYTILTHGLCKLRRLDRAKEM 450
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCD 189
F+ G + + N ++ C+ ++EA ++ ++ + P+ + Y LI+G
Sbjct: 451 FNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQ 510
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR---------- 239
L +A ++ + M ++G++ + D ++ + ++ +A ++ M+
Sbjct: 511 GNQLPDALRMHDEMENKGYDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSASD 570
Query: 240 ------------------------VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMF 275
+ + L+TY +I C++G++ A ML M
Sbjct: 571 YYLAIHCLSTAGEMEEAQALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMI 630
Query: 276 KRGIEADNLTLSSIIYGLLARGRLREA---YKVVEE----------IEKPDISLYHGLIK 322
+ GI D + + +I +GR ++A Y E I++PD L GL++
Sbjct: 631 ENGIGPDTGSYNILIKEFHNQGRTQDADQLYATALERGVVLNPKPVIQEPD-ELPEGLVR 689
Query: 323 GLLRLRRAREA 333
L R +A
Sbjct: 690 SQEELVRGCDA 700
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 171/373 (45%), Gaps = 63/373 (16%)
Query: 109 KTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK 168
+T+ + + L+ + +N F+ M + GCE ++ ++ LC+ + EA+ ++ +
Sbjct: 300 RTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSE 359
Query: 169 LSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINK 227
+SE + P+ + Y LI GYC G + +A +I +LM P+ +++I K K
Sbjct: 360 MSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRK 419
Query: 228 DDEAMKVFQMMRVKR------------------------------MDDLGLS----TYRI 253
+AM + M ++ M++ GL TY +
Sbjct: 420 VHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSV 479
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK-- 311
ID +CK G++ +A T+ + + +G++A+ + +++I G G++ AY ++E +
Sbjct: 480 FIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDA 539
Query: 312 --PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPD 369
P+ Y+ LI+GL + ++ +EA+ + +M+ G +PT+ TY
Sbjct: 540 CLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTY----------------- 582
Query: 370 PLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEV 429
TI +G ++K G A K +++ G + Y FLH Y ++ + ++V
Sbjct: 583 ------TILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDV 636
Query: 430 GKKLREVG-LADL 441
K+ E G L DL
Sbjct: 637 IAKMNEEGILPDL 649
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 171/390 (43%), Gaps = 21/390 (5%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N+ T+N ++ + K R + L +M R+L T+ + +V +L+
Sbjct: 403 NTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLL 462
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
+MN+ G + + TLC+ V EA L + ++ +K NE+ Y LI GYC V
Sbjct: 463 SLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKV 522
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS- 249
G + A + M ++ P+ + +IE K K EA + V +M +G+
Sbjct: 523 GKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSL-----VAKMLTMGVKP 577
Query: 250 ---TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
TY I+I M K G A + M G + D T ++ ++ ++G L E V+
Sbjct: 578 TVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVI 637
Query: 307 EEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ--GHL 360
++ + PD+ Y LI G RL A + M+ GC+P+++ +L++ H
Sbjct: 638 AKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHE 697
Query: 361 GK----RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHY 416
+ R G D + N +++ + + K + A K E+++ G + Y +
Sbjct: 698 NRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAG 757
Query: 417 YSNEEGVVMFEEVGKKLREVGLADLADIFQ 446
+ +E + + + ++E G++ DI+
Sbjct: 758 FCQQERLEEAQGLVHHMKERGMSPSEDIYN 787
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 125/258 (48%), Gaps = 17/258 (6%)
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
NE++Y LI G C+ G + EA K++ MT++ P++ +I + EA+ +F
Sbjct: 263 NEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLF 322
Query: 236 QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
M+ K + + TY ++ID +CK K+ +A ML EM ++G+ +T +++I G
Sbjct: 323 NEMKEKGCEP-NVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCK 381
Query: 296 RGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
G + +A+++++ +E P+ Y+ LI GL + R+ +A + +M++R P++ T
Sbjct: 382 EGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLIT 441
Query: 352 YIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVM 399
Y L+ G L G P ++F+ L K G+ +A + V
Sbjct: 442 YNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVK 501
Query: 400 NRGVEVPRFDYNKFLHYY 417
+GV+ Y + Y
Sbjct: 502 AKGVKANEVIYTALIDGY 519
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 170/390 (43%), Gaps = 42/390 (10%)
Query: 49 FPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND 108
F L + FF + +P F HN +++ M++I+ ++R + V +
Sbjct: 77 FNLDPQTALSFFNWI-ALRPGFKHNVHSYSSMLNILIRARLLG--------------VAE 121
Query: 109 KTFKIALMTLAEVRELKKMVNFFHIMNDCGCEY----SLEMLNKVVKTLCQRKLVVEAKY 164
K + + + ++ ++ F MN G E+ +L N ++ +L + L+ E K
Sbjct: 122 KIRISMIKSCCSIEDVLFVLEVFRKMNADG-EFKFKPTLRCYNTILMSLSKFLLIDEMKT 180
Query: 165 LILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFF 223
+ L+L + I PN + ++ GYC +G+++EA + + G P +I
Sbjct: 181 VYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHC 240
Query: 224 KINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADN 283
+ D A +VF +M K +S Y +I +C+ G+I++A + +M +
Sbjct: 241 RNKGVDNAYEVFLIMPQKGCQRNEVS-YTNLIHGLCEAGRINEALKLFADMTEDNCCPTV 299
Query: 284 LTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFRE 339
T + +IY L GR EA + E++ +P++ Y LI GL + + EA ++ E
Sbjct: 300 RTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSE 359
Query: 340 MIKRGCEPTMHTYIMLLQGH--------------LGKRGRKGPDPLVNFDTIFVGGLVKA 385
M ++G P++ TY L+ G+ L + GP+ + + GL K
Sbjct: 360 MSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNE--LICGLCKK 417
Query: 386 GKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
K A + +++ R + YN +H
Sbjct: 418 RKVHKAMALLNKMLERKLSPSLITYNSLIH 447
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 105/262 (40%), Gaps = 44/262 (16%)
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVG 191
++ND C + N +++ LC+ K + EA L+ K L+ +KP + Y LI G
Sbjct: 535 MLND-ACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDG 593
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG---- 247
A K++N M G++P + + +F +E V + +M++ G
Sbjct: 594 AFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDV-----IAKMNEEGILPD 648
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA----- 302
L TY ++ID + G +A+ L+ M G + +S +I L R++E
Sbjct: 649 LVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIG 708
Query: 303 ----------------------------YKVVEEIEKPDISLYHGLIKGLLRLRRAREAT 334
K+VE D+S+Y LI G + R EA
Sbjct: 709 IDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQ 768
Query: 335 QVFREMIKRGCEPTMHTYIMLL 356
+ M +RG P+ Y LL
Sbjct: 769 GLVHHMKERGMSPSEDIYNSLL 790
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 75/166 (45%), Gaps = 2/166 (1%)
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
YG LI G+C L EA + + M + G PS D+ + +++ K+ EA+++ M
Sbjct: 751 YGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMV 810
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
+ L L +Y++++ + G +A + + G D + +I GLL R +
Sbjct: 811 ENGLLPL-LESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLV 869
Query: 300 REAYKVVEEIEKPDISLYHGL-IKGLLRLRRAREATQVFREMIKRG 344
E ++++ +E+ D + + L+RL A + RG
Sbjct: 870 DECSELIDIMEEKDATAQADIACAALMRLAAANSTKGALEDHELRG 915
>gi|356540361|ref|XP_003538658.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 90/408 (22%), Positives = 180/408 (44%), Gaps = 48/408 (11%)
Query: 1 APVDPGHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQI---CNNFPLSWRPVY 57
P+ P + + +L +Y P L SL+ + ++ Q+ CNN S +
Sbjct: 40 GPLLPDLVNEISRLLSDHRY-PHHDLELSLNPFSAQISTNLVDQVLKRCNNLGFSAHRFF 98
Query: 58 LFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEM--GRRRLVNDKTFKIAL 115
L+ K+ P F H+ ++F+ +V+I+G + + W+ L EM +N + F +
Sbjct: 99 LW----AKSIPGFQHSVMSFHILVEILGSCKQFAILWDFLIEMRGSCHYEINSEIFWLIF 154
Query: 116 MTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKP 175
++ + F+ M++ G + ++ +K++ LC+ K V +A+ +
Sbjct: 155 RAYSQANLPDGAIRSFNRMDEFGIKPTINDFDKLLFILCKTKHVKQAQQFFDQAKNRFLL 214
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
Y LI G+ D+GD +A +++ M ++G + + +++ K DEA +F
Sbjct: 215 TAKTYSILISGWGDIGDSEKAHELFQAMLEQGCPVDLLAYNNLLQALCKGGCVDEAKTIF 274
Query: 236 QMMRVKRM-----------------DDL-----------------GLSTYRIVIDWMCKR 261
M KR+ DD+ + TY +I +CK
Sbjct: 275 HDMLSKRVEPDAFTYSIFIHSYCDADDVQSALRVLDKMRRYNILPNVFTYNCIIKRLCKN 334
Query: 262 GKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLY 317
+ +AY +L+EM RG+ D + ++I + A +++ +EK PD Y
Sbjct: 335 EHVEEAYLLLDEMISRGVRPDTWSYNAIQAYHCDHCEVNRAIRLMFRMEKDNCLPDRHTY 394
Query: 318 HGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
+ ++K L+R+ R + T+V+ M + P++ TY +++ G K+G+
Sbjct: 395 NMVLKLLIRIGRFDKVTKVWGNMGDKKFYPSVSTYSVMIHGFCKKKGK 442
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 138/290 (47%), Gaps = 7/290 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHI 133
+T+N +++ I K +D + L M N T I L ++
Sbjct: 287 VTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSD 346
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGD 192
M GC S+ N ++ LC++ L+ A ++ K+ PN ++Y L+ G+C
Sbjct: 347 MLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKK 406
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ A + ++M G P I + ++ K K D A+++ + K + L TY
Sbjct: 407 MDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPV-LITYN 465
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
VID + K GK +A +L+EM ++G++ D +T SS++ GL G++ EA K ++E
Sbjct: 466 TVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGL 525
Query: 311 --KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+P+ Y+ ++ GL + R+ A MI + C+PT TY +L++G
Sbjct: 526 GIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEG 575
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 165/359 (45%), Gaps = 24/359 (6%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
IT+N ++ KS ID LQ + R + D T+ L TL + +LK+ +
Sbjct: 185 ITYNVLISGYCKSGEID---NALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDR 241
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGD 192
C + +++ C+ V +A L+ ++ ++ KP+ + Y LI G C G
Sbjct: 242 QLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGR 301
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
L EA K N M G +P++ + ++ + + +A K+ M +++ + T+
Sbjct: 302 LDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDM-LRKGCSPSVVTFN 360
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK- 311
I+I+++C++G + +A +LE+M G ++L+ + +++G ++ A + ++ +
Sbjct: 361 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 420
Query: 312 ---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG---- 364
PDI Y+ L+ L + + A ++ ++ +GC P + TY ++ G L K G
Sbjct: 421 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDG-LSKVGKTER 479
Query: 365 ---------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
RKG P + + V GL + GK +A K+ + G+ YN +
Sbjct: 480 AIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIM 538
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 132/283 (46%), Gaps = 24/283 (8%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+ I Y LI GYC G++ A ++ + M P + + ++ T K +AM+V
Sbjct: 182 PDVITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEV 238
Query: 235 F--QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
Q+ + D + TY I+I+ CK + QA +L+EM +G + D +T + +I G
Sbjct: 239 LDRQLQKECYPDVI---TYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLING 295
Query: 293 LLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
+ GRL EA K + + +P++ ++ +++ + R +A ++ +M+++GC P+
Sbjct: 296 ICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPS 355
Query: 349 MHTYIMLL-----QGHLG-------KRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVE 396
+ T+ +L+ QG LG K G P + G K K A +Y++
Sbjct: 356 VVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLD 415
Query: 397 RVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLA 439
+++RG YN L + V + E+ +L G +
Sbjct: 416 IMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCS 458
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 114/244 (46%), Gaps = 24/244 (9%)
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM-RVKRMDDLGLS 249
G+L + K M G P I +I F +I K +A V +++ + + D +
Sbjct: 128 GELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD--VI 185
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE-E 308
TY ++I CK G+I A +L+ M + D +T ++I+ L G+L++A +V++ +
Sbjct: 186 TYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 242
Query: 309 IEK---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
++K PD+ Y LI+ + +A ++ EM +G +P + TY +L+ G + K GR
Sbjct: 243 LQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLING-ICKEGR 301
Query: 366 -------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNK 412
G P V I + + G+ +DA K + ++ +G +N
Sbjct: 302 LDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNI 361
Query: 413 FLHY 416
+++
Sbjct: 362 LINF 365
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 106/241 (43%), Gaps = 11/241 (4%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHI 133
+TFN +++ + + + + L++M N ++ L + +++ + + + I
Sbjct: 357 VTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDI 416
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGD 192
M GC + N ++ LC+ V A ++ +LS + P I Y +I G VG
Sbjct: 417 MVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGK 476
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS--- 249
A K+ + M +G +P I ++ + K DEA+K F ++ LG+
Sbjct: 477 TERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFH-----DLEGLGIRPNA 531
Query: 250 -TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY ++ +CK + +A L M + + T + +I G+ G +EA ++ E
Sbjct: 532 ITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNE 591
Query: 309 I 309
+
Sbjct: 592 L 592
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 3/209 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFF 131
NS+++N ++ K + +D E L M R D T+ L L + ++ V
Sbjct: 390 NSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEIL 449
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDV 190
+ ++ GC L N V+ L + A L+ ++ + +KP+ I Y L+ G
Sbjct: 450 NQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSRE 509
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G + EA K ++ + G P+ + ++ K + D A+ M KR +T
Sbjct: 510 GKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTE-AT 568
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGI 279
Y I+I+ + G +A +L E+ RG+
Sbjct: 569 YTILIEGIAYEGLAKEALDLLNELCSRGL 597
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 69/160 (43%), Gaps = 17/160 (10%)
Query: 293 LLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
L+ G L + +K +E + + PDI LI+G R+ + ++AT V + + G P
Sbjct: 124 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 183
Query: 349 MHTYIMLLQGHLGK-----------RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVER 397
+ TY +L+ G+ R PD +V ++TI L +GK A + ++R
Sbjct: 184 VITYNVLISGYCKSGEIDNALQVLDRMNVAPD-VVTYNTIL-RTLCDSGKLKQAMEVLDR 241
Query: 398 VMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVG 437
+ + Y + E GV ++ ++R G
Sbjct: 242 QLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKG 281
>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 144/296 (48%), Gaps = 7/296 (2%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVN 129
AHN T N +++ + + +I L +M + + D TF + L +K+ V
Sbjct: 118 AHNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVE 177
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYC 188
F+ M + +V LC++ +V EA+ + ++E ++PN Y L+ GYC
Sbjct: 178 LFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYC 237
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
++ +ASK++ +M +G PS+ +I + K + DEA + M K +
Sbjct: 238 LRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIP-NT 296
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY ++ +C + +A + ++M G+ + T S ++ GL G L EA K++
Sbjct: 297 VTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTS 356
Query: 309 IE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL 360
++ +PDI LY+ LI+G+ + A ++F ++ G P++ TY ++++G L
Sbjct: 357 MQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLL 412
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 108/218 (49%), Gaps = 22/218 (10%)
Query: 242 RMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
+MD G++ T I+I+ +C+ I A ++L +MFK GI+ D++T +++I GL G
Sbjct: 111 QMDLFGVAHNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEG 170
Query: 298 RLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYI 353
R++EA ++ E+ P+ + L+ L + EA VF M ++G EP ++TY
Sbjct: 171 RIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYN 230
Query: 354 MLLQGH-----LGKRGR-------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNR 401
L+ G+ + + KG P V+ +I + G K+ + +D AK + M+
Sbjct: 231 ALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKS-RRIDEAKALLTQMSE 289
Query: 402 GVEVPR-FDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
+P YN + + ++ +E+ KK+ G+
Sbjct: 290 KELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGM 327
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 140/302 (46%), Gaps = 16/302 (5%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
N +T++ +++ K R E EM R ++ N T+ + + L + F
Sbjct: 318 NVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMF 377
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
++M GC + N ++ C K + + L+ +++E + + Y LI G+C V
Sbjct: 378 YVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLV 437
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD------ 244
GDL A + M G P I + +++ K +A+++F+ M+ +MD
Sbjct: 438 GDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRP 497
Query: 245 ----DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
+ + TY I+I + GK +A + +EM RGI + +T SS+I GL + RL
Sbjct: 498 FNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLD 557
Query: 301 EAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
EA ++ + + PD+ ++ L+ G + R + ++F EM +RG TYI L+
Sbjct: 558 EATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLI 617
Query: 357 QG 358
G
Sbjct: 618 HG 619
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 158/360 (43%), Gaps = 20/360 (5%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHI 133
I FN+++ ++ + DL Q+M R+++ D +F I + +L ++ F
Sbjct: 78 IDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNILIKCFCSCSKLPFALSTFGK 137
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDL 193
+ G + + + ++ LC V EA L + +PN + + L+ G C G +
Sbjct: 138 ITKLGFQPDVVTFSTLLHGLCVEDRVSEALDL---FHQMCRPNVVTFTTLMNGLCREGRV 194
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
+EA + + M ++G +P+ +++ KI A+ + + M + Y
Sbjct: 195 VEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSA 254
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK-- 311
+ID + K G+ S A+ + EM ++GI D T + +I G + GR EA ++++E+ +
Sbjct: 255 IIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERK 314
Query: 312 --PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR------ 363
P++ Y LI ++ R+ EA +++ EM+ RG P TY ++ G +
Sbjct: 315 INPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAE 374
Query: 364 ------GRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
KG P V + G A + D + + + G+ YN +H +
Sbjct: 375 HMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGF 434
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 136/313 (43%), Gaps = 22/313 (7%)
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGY 187
N + M + G L N ++ C EA+ L+ ++ E I PN + Y LI Y
Sbjct: 270 NLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAY 329
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
EA ++++ M G P+ + MI+ F K N+ D A +F +M K
Sbjct: 330 VKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSP-D 388
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
+ T+ +ID C +I +L EM + G+ AD T +++I+G G L A + +
Sbjct: 389 VFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQ 448
Query: 308 EIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
++ PDI + L+ GL + ++A ++F+ M K + R
Sbjct: 449 QMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLD------------ASR 496
Query: 364 GRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE--- 420
G +P V I + GL+ GK L+A + + + +RG+ Y+ ++ +
Sbjct: 497 PFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRL 556
Query: 421 -EGVVMFEEVGKK 432
E MF+ +G K
Sbjct: 557 DEATQMFDSMGSK 569
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 139/322 (43%), Gaps = 21/322 (6%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEV 121
YT+ + + T+N M+D S LQEM R+ +N + + A V
Sbjct: 272 YTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERK-INPNVVTYSALINAYV 330
Query: 122 RELK--KMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEI 178
+E K + + M G + N ++ C++ + A+++ + ++ P+
Sbjct: 331 KERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVF 390
Query: 179 AYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
+ LI GYC + + +++ + MT+ G + +I F + + A+ + Q M
Sbjct: 391 TFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQM 450
Query: 239 RVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFK-----------RGIEADNLTLS 287
+ + T ++D +C GK+ A M + M K G+E D T +
Sbjct: 451 -ISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYN 509
Query: 288 SIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
+I GL+ G+ EA ++ +E+ P+ Y +I GL + R EATQ+F M +
Sbjct: 510 ILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSK 569
Query: 344 GCEPTMHTYIMLLQGHLGKRGR 365
P + T+ L+ G+ K GR
Sbjct: 570 SFSPDVVTFNTLVSGYC-KAGR 590
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 110/261 (42%), Gaps = 15/261 (5%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKT-FKIALMTLAE 120
Y + C + + TFN ++D ++ ID E L EM LV D T + +
Sbjct: 378 YVMATKGC-SPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCL 436
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE--------- 171
V +L ++ M G + N ++ LC + +A + + +
Sbjct: 437 VGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASR 496
Query: 172 ---WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++P+ Y LI G + G +EA +++ M G P+ MI K ++
Sbjct: 497 PFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRL 556
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
DEA ++F M K + T+ ++ CK G++ + EM +RGI AD +T +
Sbjct: 557 DEATQMFDSMGSKSFSP-DVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYIT 615
Query: 289 IIYGLLARGRLREAYKVVEEI 309
+I+G G + A + +E+
Sbjct: 616 LIHGFRKVGNINGALDIFQEM 636
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 113/243 (46%), Gaps = 16/243 (6%)
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
L G+ ++ L +A +++ M PS+ +K++ ++ + D + ++Q M K+
Sbjct: 48 LRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQ 107
Query: 243 MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
+ + ++ I+I C K+ A + ++ K G + D +T S++++GL R+ EA
Sbjct: 108 IP-CDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEA 166
Query: 303 YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
+ ++ +P++ + L+ GL R R EA + M++ G +P TY ++ G + K
Sbjct: 167 LDLFHQMCRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDG-MCK 225
Query: 363 RG---------RKGPD-----PLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRF 408
G RK + P V + + GL K G+ DA + +G+ F
Sbjct: 226 IGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLF 285
Query: 409 DYN 411
YN
Sbjct: 286 TYN 288
>gi|302801478|ref|XP_002982495.1| hypothetical protein SELMODRAFT_116601 [Selaginella moellendorffii]
gi|300149594|gb|EFJ16248.1| hypothetical protein SELMODRAFT_116601 [Selaginella moellendorffii]
Length = 448
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 136/287 (47%), Gaps = 22/287 (7%)
Query: 145 MLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
ML+ ++KT R EA ++ ++ + P+ + Y LI C +A K++++M
Sbjct: 121 MLDCLIKTGKTR----EASEVVGEMIKKSVPDGMTYTALISVLCKHNRADDAMKVFDIMV 176
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
++ P++DV ++ + K D A ++F M ++R STY +++ +C G+
Sbjct: 177 EKEIVPNLDVYTSLLAAHCRTRKLDGAYRLFVEM-IQRGYGPSASTYGLLLRCLCNGGRS 235
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA---YKVVEEIEKP--DISLYHG 319
AY + M RG D T +S+IYG GR+ EA +K V E EK D +Y+
Sbjct: 236 YLAYDIHSSMRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKALLDAGIYNV 295
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR------------GRKG 367
LI+GL R + EA +V M+ +GC PT+ TY L+ G KG
Sbjct: 296 LIEGLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRVMEEKG 355
Query: 368 PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
P + F+ GL K GK +A ++ ++ + RG YN +
Sbjct: 356 FSPNTMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALI 402
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 86/158 (54%), Gaps = 3/158 (1%)
Query: 154 CQRKLVVEAKYLILKLSEWIKP--NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPS 211
C + EAK L ++ E K + Y LI+G C + EA ++ M D+G P+
Sbjct: 265 CMAGRITEAKVLFKEVLEGEKALLDAGIYNVLIEGLCRASKVEEALEVTAGMVDKGCIPT 324
Query: 212 IDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTML 271
+ + +I FFK N+ D+A+++F++M K + Y ID +CK GKI++A+
Sbjct: 325 LQTYNALIMGFFKANEVDKALQLFRVMEEKGFSPNTM-IYSTFIDGLCKVGKINEAHEFF 383
Query: 272 EEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
++ +RG DN+T +++I GL R+ EA+++ E+
Sbjct: 384 QQSVERGCVPDNVTYNALIRGLFGANRMDEAHRLYREM 421
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 103/227 (45%), Gaps = 39/227 (17%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
L + + P+ +Y L++G + + +A + + M EG++P + +++ F ++ +
Sbjct: 2 LEDGVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKRV 61
Query: 229 DEAMKVFQMMRVK--------------------------RMDDLGLS--------TYRIV 254
E ++FQ + + D+ + Y+ +
Sbjct: 62 GEVCELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKTM 121
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV----VEEIE 310
+D + K GK +A ++ EM K+ + D +T +++I L R +A KV VE+
Sbjct: 122 LDCLIKTGKTREASEVVGEMIKKSV-PDGMTYTALISVLCKHNRADDAMKVFDIMVEKEI 180
Query: 311 KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
P++ +Y L+ R R+ A ++F EMI+RG P+ TY +LL+
Sbjct: 181 VPNLDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLR 227
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 158/341 (46%), Gaps = 38/341 (11%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
N T+ + L E R +K ++M GC ++ N+++K C ++ + K +
Sbjct: 389 NTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYC---ILGDPKKAM 445
Query: 167 LKLSEWIK----PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETF 222
L ++ ++ N + Y +IKGYCD G+ A +I +LM D G +P ++I F
Sbjct: 446 LVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGF 505
Query: 223 FKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRG 278
KI+K + A +F M +DD GL TY +ID CK K+ A ++LE M + G
Sbjct: 506 CKISKMESAFGLFNEM----VDD-GLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSG 560
Query: 279 IEADNLTLSSIIYGLLARGRLREAYKV----VEEIEKPDISLYHGLIKGLLRLRRAREAT 334
+ T + +I+GL + A ++ +EE P++ Y +I GL + A
Sbjct: 561 CRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLAL 620
Query: 335 QVFREMIKRGCEPTMHTYIMLLQGHLGKRG-------------RKG--PDPLVNFDTIFV 379
++F +MI++GC P + TY L++ LG+ G R G PD + I
Sbjct: 621 EMFNKMIEQGCLPNLLTYSSLIRA-LGQEGKVEEAENLFAELERHGLIPDEITYVKMI-- 677
Query: 380 GGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE 420
+ +GK A ++ R++ G + + Y + NE
Sbjct: 678 EAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNE 718
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 114/285 (40%), Gaps = 17/285 (5%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
LSE ++PN + Y +I C G++ +A I + + P MI + +
Sbjct: 207 LSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDL 266
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
D A++VF M K + TY +I+ +C G++++A+ ++ EM GI T +
Sbjct: 267 DSALQVFNQM-AKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTG 325
Query: 289 IIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
I L G +A+++ +++ +P++ Y LI GL + A +F M + G
Sbjct: 326 PIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDG 385
Query: 345 CEPTMHTYIMLLQGHLGKR------------GRKGPDPLVNFDTIFVGGLVKAGKSLDAA 392
P TY L+ + R GR G P + + G G A
Sbjct: 386 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAM 445
Query: 393 KYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVG 437
+ ++ RG YN + Y + + +R+ G
Sbjct: 446 LVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG 490
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 90/419 (21%), Positives = 156/419 (37%), Gaps = 73/419 (17%)
Query: 63 TQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVR 122
++ QP N + +N +++ + K N+ ++++ + D TF M L R
Sbjct: 208 SEGVQP----NLLIYNAVINALCKDGNVADAETIMKKVFESEMSPD-TFTYTSMILGHCR 262
Query: 123 --ELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL----------- 169
+L + F+ M GCE + + ++ LC V EA LI ++
Sbjct: 263 KHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 322
Query: 170 ---------------SEW----------IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
W +PN Y LI G C G L A +++ M+
Sbjct: 323 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMS 382
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
+G P+ + +I + + A V +M + + TY +I C G
Sbjct: 383 RDGVFPNTVTYNALINILVENRRIKYAFVVLNLMG-RNGCSPNIVTYNEMIKGYCILGDP 441
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGL 320
+A ++ M +RG A+ +T ++II G G A ++++ + KPD Y L
Sbjct: 442 KKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTEL 501
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVG 380
I G ++ + A +F EM+ G P TY L+ G+
Sbjct: 502 ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKD------------------ 543
Query: 381 GLVKAGKSLDAAKYVERVMNRGVEVPRFD-YNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
+ LD A + M R P YN +H + + EE+ K + E G+
Sbjct: 544 ------EKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGI 596
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 5/184 (2%)
Query: 179 AYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
AY L+ +G ++ M EG +P++ + + +I K +A + + +
Sbjct: 182 AYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV 241
Query: 239 RVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR 298
M TY +I C++ + A + +M K G E + +T S++I GL GR
Sbjct: 242 FESEMSPDTF-TYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGR 300
Query: 299 LREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIM 354
+ EA+ ++ E+ P G I L + +A ++F +M +GCEP ++TY
Sbjct: 301 VNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTA 360
Query: 355 LLQG 358
L+ G
Sbjct: 361 LISG 364
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 72/186 (38%), Gaps = 18/186 (9%)
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA--- 302
+GL Y ++ + + G + M G++ + L +++I L G + +A
Sbjct: 178 MGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETI 237
Query: 303 -YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG 361
KV E PD Y +I G R A QVF +M K GCEP TY L+ G L
Sbjct: 238 MKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLING-LC 296
Query: 362 KRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRF 408
GR G P + T + L G DA + + N+G E +
Sbjct: 297 DSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVY 356
Query: 409 DYNKFL 414
Y +
Sbjct: 357 TYTALI 362
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 135/358 (37%), Gaps = 47/358 (13%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
N +T+ ++D K +D L+ M R N +T+ + + L +
Sbjct: 529 NEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELC 588
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDV 190
+M + G ++ ++ LC+ A + K+ E PN + Y LI+
Sbjct: 589 KVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQE 648
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G + EA ++ + G P KMIE + K + A M +K L T
Sbjct: 649 GKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRM-IKAGCQPTLWT 707
Query: 251 YRIVIDWM--------------------CKRGKISQAYTMLEEMFKRGIEAD-NLTL--- 286
Y ++I + C G + + M + E D L++
Sbjct: 708 YGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQ 767
Query: 287 SSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIK 342
++++ L GR EA +++ + PD Y+ L+ LLR+R A VF+ M
Sbjct: 768 NALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMST 827
Query: 343 RGCEPTMHTY----IMLLQGHLGKRGRK----------GPDPLVNFDTIFVGGLVKAG 386
+GCE ++ Y L Q H K R PD +V + + GL++ G
Sbjct: 828 QGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVV--QAVLIDGLLRDG 883
>gi|449449535|ref|XP_004142520.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
mitochondrial-like [Cucumis sativus]
gi|449518358|ref|XP_004166209.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
mitochondrial-like [Cucumis sativus]
Length = 455
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 168/387 (43%), Gaps = 31/387 (8%)
Query: 36 NLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWE 95
NL E ++ S + FF + P + ++ F +V + ++R W+
Sbjct: 69 NLNSELVFRVLRACSNSGTESFRFFNWACSHNPSYQPTTLEFEELVKTLARTRKYTTMWK 128
Query: 96 TLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIMNDCG----CEYSLEMLNKVV 150
L +M + L ++ +T + + + V F N C C ++E+ N ++
Sbjct: 129 VLLQMKTQNLKISPETISFIIQEYGKQGLVDNAVTIF---NQCSKSIDCPQTVEVYNALL 185
Query: 151 KTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFE 209
LC+ K+ A LI ++ + + P++ YG L+ G+C G + EA + M+ +GF
Sbjct: 186 FALCEVKMFHGAYALIRRMIRKGVTPDKKTYGTLVTGWCSAGKMKEAQEFLEEMSQKGFN 245
Query: 210 PSIDVVDKMIETFFKINKDDEAMK-VFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAY 268
P + D ++E + A V +M + + D+G T+ +ID +C G++
Sbjct: 246 PPLRGRDLLVEGLLNAGYLESAKDMVRKMTKEGSVPDIG--TFNSLIDVICNSGEVDFCI 303
Query: 269 TMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV----VEEIEKPDISLYHGLIKGL 324
+ E+ K G+ D T +I GR+ EA+++ +E+ P SLY ++KG+
Sbjct: 304 NIFHEVCKLGLCPDINTYKILIPATSKVGRIDEAFRLLHCCIEDGHVPFPSLYGPILKGM 363
Query: 325 LRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR-------------KGPDPL 371
+ + +A F +M +G P Y ML+ G+ GR G P+
Sbjct: 364 CKRGQFDDAFCFFGDMKHKGHPPNRPVYTMLIT-MCGRGGRFVDAANYLMEMAELGLPPI 422
Query: 372 VNFDTIFVGGLVKAGKSLDAAKYVERV 398
+ GL GK D AK +E++
Sbjct: 423 SRCFDMVTDGLKNCGKH-DLAKKIEQL 448
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 85/212 (40%), Gaps = 30/212 (14%)
Query: 200 WNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMC 259
W + ++P+ +++++T + K KV M+ + + + T +I
Sbjct: 95 WACSHNPSYQPTTLEFEELVKTLARTRKYTTMWKVLLQMKTQNLK-ISPETISFIIQEYG 153
Query: 260 KRGKISQAYTMLEEMFK-----RGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDI 314
K+G + A T+ + K + +E N L ++ + G +++ + PD
Sbjct: 154 KQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFHGAYALIRRMIRKGVTPDK 213
Query: 315 SLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNF 374
Y L+ G + +EA + EM ++G P + RGR
Sbjct: 214 KTYGTLVTGWCSAGKMKEAQEFLEEMSQKGFNPPL-------------RGRD-------- 252
Query: 375 DTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
+ V GL+ AG L++AK + R M + VP
Sbjct: 253 --LLVEGLLNAG-YLESAKDMVRKMTKEGSVP 281
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 162/366 (44%), Gaps = 19/366 (5%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
N +++ ++ ++R +D + +M +T+ + + L ++ + +N F
Sbjct: 273 NEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMF 332
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
M + C+ ++ ++ +LC+ +AK ++ + E + P+ + Y LI GYC
Sbjct: 333 KEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKK 392
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G A +I +LM P+ +++I F + +AM + M +++ + T
Sbjct: 393 GLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQP-NVVT 451
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y I+I CK G + AY +L M + G+ D T S I L RG + EA + E ++
Sbjct: 452 YNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLK 511
Query: 311 KPDIS----LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG-- 364
+ I +Y LI G ++ + + + +M+ GC P TY L+ G+ ++
Sbjct: 512 EKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFK 571
Query: 365 ----------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
++ +P + TI + L+K + A +++++ G F Y F+
Sbjct: 572 EARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFI 631
Query: 415 HYYSNE 420
H Y +
Sbjct: 632 HAYCSH 637
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 164/383 (42%), Gaps = 24/383 (6%)
Query: 58 LFFQYTQK-AQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALM 116
+F + T+K QP N T+ ++ + + N D + L M + L+ AL+
Sbjct: 331 MFKEMTEKHCQP----NVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALI 386
Query: 117 TLAEVRELK-KMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IK 174
+ L + +M C + N+++ C+ K + +A L+ K+ E ++
Sbjct: 387 DGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQ 446
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
PN + Y LI G C GDL A K+ +LM + G P I+T K +EA +
Sbjct: 447 PNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSL 506
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
F+ ++ K + Y +ID CK GK+S +L++M G +++T +S+I G
Sbjct: 507 FESLKEKGI-KANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYC 565
Query: 295 ARGRLREAYKVVEEIEKPDI----SLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
+EA +V+ + K DI Y LI LL+ +A +F +M+ G P +
Sbjct: 566 KEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVF 625
Query: 351 TYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERV 398
Y + + + K KG P T+F+ + G A ++R+
Sbjct: 626 IYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRM 685
Query: 399 MNRGVEVPRFDYNKFLHYYSNEE 421
G E + Y+ + + SN +
Sbjct: 686 HEVGCEPSYYTYSCLIKHLSNAK 708
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/365 (20%), Positives = 153/365 (41%), Gaps = 30/365 (8%)
Query: 63 TQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRR-LVNDKTFKIALMTLAEV 121
++ Q + ++ T+ ++ +++N+D M + L N+ ++ + E
Sbjct: 228 SKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEA 287
Query: 122 RELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAY 180
R + + + F M++ C ++ ++ LCQ EA + +++E +PN Y
Sbjct: 288 RRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTY 347
Query: 181 GWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
LI C+ + +A KI N M ++G PS+ + +I+ + K A+++ +M
Sbjct: 348 TVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMES 407
Query: 241 KRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
TY +I C+ I +A ++L +M +R ++ + +T + +I+G G L
Sbjct: 408 NNCSP-NARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLG 466
Query: 301 EAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
AYK++ + + PD Y I L + EA +F + ++G + Y L+
Sbjct: 467 SAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLI 526
Query: 357 QGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHY 416
G+ K GK D ++++++ G YN +
Sbjct: 527 DGY-----------------------CKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDG 563
Query: 417 YSNEE 421
Y E+
Sbjct: 564 YCKEK 568
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/396 (21%), Positives = 155/396 (39%), Gaps = 66/396 (16%)
Query: 114 ALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEW 172
AL L +R + + V+ F + +L N ++ L + ++ E K + L+ L +
Sbjct: 146 ALFVLEMLRSMNRRVDAFKF------KLTLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDM 199
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFE----------------PSIDVVD 216
+ PN ++ GYC +G+++EA + + G ++D +
Sbjct: 200 VTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAAN 259
Query: 217 -------------------KMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDW 257
+I F + + DEA+K+F M + TY ++I
Sbjct: 260 AIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPT-VRTYTVIIFA 318
Query: 258 MCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE-IEK---PD 313
+C+ G+ ++A M +EM ++ + + T + +I L +A K++ +EK P
Sbjct: 319 LCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPS 378
Query: 314 ISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL-GKRGRKGPD--- 369
+ Y+ LI G + + A ++ M C P TY L+ G GK K
Sbjct: 379 VVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLH 438
Query: 370 --------PLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN-- 419
P V I + G K G A K + + G+ + Y+ F+
Sbjct: 439 KMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRG 498
Query: 420 --EEGVVMFE---EVGKKLREVGLADLADIFQRYGK 450
EE +FE E G K EV + L D + + GK
Sbjct: 499 LVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGK 534
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 70/358 (19%), Positives = 128/358 (35%), Gaps = 69/358 (19%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
NSIT+N ++D K +N + M +R + T+ I + L + E + + F
Sbjct: 553 NSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMF 612
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
M G + + + C + +A+ LI K+ ++ I P+ + Y I Y
Sbjct: 613 DQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRF 672
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV---------------- 234
G + A I M + G EPS +I+ + +
Sbjct: 673 GSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSN 732
Query: 235 --------FQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEAD 282
F + +M + G + TY I +CK G + A+ + + M ++G +
Sbjct: 733 CWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPN 792
Query: 283 NLTLSSIIYGLLARGRLREAYK----VVEEIEKP-------------------------- 312
+S++ G EA + ++E P
Sbjct: 793 EDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFC 852
Query: 313 ---------DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG 361
D ++ LI GLL+ + + + +F M +GC+ TY ML++G G
Sbjct: 853 SFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIEGFDG 910
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 158/341 (46%), Gaps = 38/341 (11%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
N T+ + L E R +K ++M GC ++ N+++K C ++ + K +
Sbjct: 389 NTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYC---ILGDPKKAM 445
Query: 167 LKLSEWIK----PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETF 222
L ++ ++ N + Y +IKGYCD G+ A +I +LM D G +P ++I F
Sbjct: 446 LVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGF 505
Query: 223 FKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRG 278
KI+K + A +F M +DD GL TY +ID CK K+ A ++LE M + G
Sbjct: 506 CKISKMESAFGLFNEM----VDD-GLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSG 560
Query: 279 IEADNLTLSSIIYGLLARGRLREAYKV----VEEIEKPDISLYHGLIKGLLRLRRAREAT 334
+ T + +I+GL + A ++ +EE P++ Y +I GL + A
Sbjct: 561 CRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLAL 620
Query: 335 QVFREMIKRGCEPTMHTYIMLLQGHLGKRG-------------RKG--PDPLVNFDTIFV 379
++F +MI++GC P + TY L++ LG+ G R G PD + I
Sbjct: 621 EMFNKMIEQGCLPNLLTYSSLIRA-LGQEGKVEEAENLFAELERHGLIPDEITYVKMI-- 677
Query: 380 GGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE 420
+ +GK A ++ R++ G + + Y + NE
Sbjct: 678 EAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNE 718
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 114/285 (40%), Gaps = 17/285 (5%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
LSE ++PN + Y +I C G++ +A I + + P MI + +
Sbjct: 207 LSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDL 266
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
D A++VF M K + TY +I+ +C G++++A+ ++ EM GI T +
Sbjct: 267 DSALQVFNQM-AKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTG 325
Query: 289 IIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
I L G +A+++ +++ +P++ Y LI GL + A +F M + G
Sbjct: 326 PIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDG 385
Query: 345 CEPTMHTYIMLLQGHLGKR------------GRKGPDPLVNFDTIFVGGLVKAGKSLDAA 392
P TY L+ + R GR G P + + G G A
Sbjct: 386 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAM 445
Query: 393 KYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVG 437
+ ++ RG YN + Y + + +R+ G
Sbjct: 446 LVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG 490
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 89/419 (21%), Positives = 157/419 (37%), Gaps = 73/419 (17%)
Query: 63 TQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVR 122
++ QP N + +N +++ + K N+ ++++ + D TF M L R
Sbjct: 208 SEGVQP----NLLIYNAVINALCKDGNVADAETIMKKVFESEMSPD-TFTYTSMILGHCR 262
Query: 123 --ELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL----------- 169
+L + F+ M GCE + + ++ LC V EA LI ++
Sbjct: 263 KHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 322
Query: 170 -------------------------SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
++ +PN Y LI G C G L A +++ M+
Sbjct: 323 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMS 382
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
+G P+ + +I + + A V +M + + TY +I C G
Sbjct: 383 RDGVFPNTVTYNALINILVENRRIKYAFVVLNLMG-RNGCSPNIVTYNEMIKGYCILGDP 441
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGL 320
+A ++ M +RG A+ +T ++II G G A ++++ + KPD Y L
Sbjct: 442 KKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTEL 501
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVG 380
I G ++ + A +F EM+ G P TY L+ G+
Sbjct: 502 ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKD------------------ 543
Query: 381 GLVKAGKSLDAAKYVERVMNRGVEVPRFD-YNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
+ LD A + M R P YN +H + + EE+ K + E G+
Sbjct: 544 ------EKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGI 596
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 5/184 (2%)
Query: 179 AYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
AY L+ +G ++ M EG +P++ + + +I K +A + + +
Sbjct: 182 AYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV 241
Query: 239 RVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR 298
M TY +I C++ + A + +M K G E + +T S++I GL GR
Sbjct: 242 FESEMSPDTF-TYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGR 300
Query: 299 LREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIM 354
+ EA+ ++ E+ P G I L + +A ++F +M +GCEP ++TY
Sbjct: 301 VNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTA 360
Query: 355 LLQG 358
L+ G
Sbjct: 361 LISG 364
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 72/186 (38%), Gaps = 18/186 (9%)
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA--- 302
+GL Y ++ + + G + M G++ + L +++I L G + +A
Sbjct: 178 MGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETI 237
Query: 303 -YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG 361
KV E PD Y +I G R A QVF +M K GCEP TY L+ G L
Sbjct: 238 MKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLING-LC 296
Query: 362 KRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRF 408
GR G P + T + L G DA + + N+G E +
Sbjct: 297 DSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVY 356
Query: 409 DYNKFL 414
Y +
Sbjct: 357 TYTALI 362
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 135/358 (37%), Gaps = 47/358 (13%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
N +T+ ++D K +D L+ M R N +T+ + + L +
Sbjct: 529 NEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELC 588
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
+M + G ++ ++ LC+ A + K+ E PN + Y LI+
Sbjct: 589 KVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQE 648
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G + EA ++ + G P KMIE + K + A M +K L T
Sbjct: 649 GKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRM-IKAGCQPTLWT 707
Query: 251 YRIVIDWM--------------------CKRGKISQAYTMLEEMFKRGIEAD-NLTL--- 286
Y ++I + C G + + M + E D L++
Sbjct: 708 YGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQ 767
Query: 287 SSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIK 342
++++ L GR EA +++ + PD Y+ L+ LLR+R A VF+ M
Sbjct: 768 NALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMST 827
Query: 343 RGCEPTMHTY----IMLLQGHLGKRGRK----------GPDPLVNFDTIFVGGLVKAG 386
+GCE ++ Y L Q H K R PD +V + + GL++ G
Sbjct: 828 QGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQ--AVLIDGLLRDG 883
>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
Length = 701
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 165/374 (44%), Gaps = 44/374 (11%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEV 121
Y + + P A N F MVDI G + I ++F L E
Sbjct: 88 YAKCSMPDQALN--LFQNMVDIFGCNPGI------------------RSFNSMLNAFIES 127
Query: 122 RELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAY 180
+ ++ FF G +L+ N ++K C+++ + K L+ + E + P+ ++Y
Sbjct: 128 NQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSY 187
Query: 181 GWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
G LI G+L++A ++++ M+ G P + + +I+ F + +A ++++ +
Sbjct: 188 GTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLT 247
Query: 241 KRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
+ + TY I+I+ +CK GK+ ++ M M K D T SS+I+GL G
Sbjct: 248 ESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFN 307
Query: 301 EAYKVVEE-IE---KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
A KV +E IE PD+ Y+ ++ GL R + + +++ M K C + +Y ML+
Sbjct: 308 AAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNC-CNIVSYNMLI 366
Query: 357 QGHLG---------------KRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNR 401
QG L +RG K + + GL K G A + +E N
Sbjct: 367 QGLLDNKKVEQAICYWQLLHERGLKADSTTYG---LLINGLCKNGYLNKALRILEEAENE 423
Query: 402 GVEVPRFDYNKFLH 415
G ++ F Y+ +H
Sbjct: 424 GADLDTFAYSSMVH 437
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 165/378 (43%), Gaps = 68/378 (17%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHIM 134
TF+ M+ + K+ N + + QEM L D +T+ L L +L K +++M
Sbjct: 292 TFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVM 351
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDVGDL 193
+ C ++ N +++ L K V +A Y L +K + YG LI G C G L
Sbjct: 352 SKNNC-CNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYL 410
Query: 194 IEASKIWNLMTDEG--------------------FEPSIDVVDKMIETFFKIN------- 226
+A +I +EG E +++++ +M + K+N
Sbjct: 411 NKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSL 470
Query: 227 --------KDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRG 278
K +EA+ V + M+ K +S Y +I+ +CK + S AY L+EM + G
Sbjct: 471 INGYVRAFKLEEAISVLREMKSKDCAPTVVS-YNTIINGLCKAERFSDAYLSLKEMLEEG 529
Query: 279 IEADNLTLSSIIYGLLARGR-----LREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREA 333
++ D +T S +I G L RG L ++ + + KPD+ +++ +I GL ++ A
Sbjct: 530 LKPDMITYSLLIDG-LCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVA 588
Query: 334 TQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAK 393
++F +M + C P + T+ +++ GL KAG ++A K
Sbjct: 589 LEIFTQMRQVNCVPDLVTHNTIME-----------------------GLYKAGDCVEALK 625
Query: 394 YVERVMNRGVEVPRFDYN 411
+R++ G++ YN
Sbjct: 626 IWDRILEAGLQPDIISYN 643
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/329 (20%), Positives = 133/329 (40%), Gaps = 46/329 (13%)
Query: 73 NSITFNRMVDIIGKSRNID---LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
N +++N ++ + ++ ++ +W+ L E G + + T+ + + L + L K +
Sbjct: 358 NIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLK--ADSTTYGLLINGLCKNGYLNKALR 415
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI----------------------- 166
+ G + + +V LC++ ++ +A LI
Sbjct: 416 ILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYV 475
Query: 167 --LKLSEWIK-----------PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSID 213
KL E I P ++Y +I G C +A M +EG +P +
Sbjct: 476 RAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMI 535
Query: 214 VVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEE 273
+I+ + K D A+ ++ KR+ L + I+I +C K+ A + +
Sbjct: 536 TYSLLIDGLCRGEKVDMALNLWHQCINKRLKP-DLQMHNIIIHGLCTAQKVDVALEIFTQ 594
Query: 274 MFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRR 329
M + D +T ++I+ GL G EA K+ + I +PDI Y+ KGL R
Sbjct: 595 MRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCAR 654
Query: 330 AREATQVFREMIKRGCEPTMHTYIMLLQG 358
+A + + + RG P T+ +L++
Sbjct: 655 VSDAIEFLYDALDRGILPNAPTWNVLVRA 683
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 117/276 (42%), Gaps = 56/276 (20%)
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM--------RVKRMD 244
++ +I +LM + S DV I+ + K + D+A+ +FQ M ++ +
Sbjct: 59 VVHVGRIVDLMRAQRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFN 118
Query: 245 DL---------------------------GLSTYRIVIDWMCKRGKISQAYTMLEEMFKR 277
+ L TY I+I CK+ + + +L MF+
Sbjct: 119 SMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFEN 178
Query: 278 GIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREA 333
G+ D L+ ++I L G L +A ++ +E+ PD+ Y+ LI G LR +A
Sbjct: 179 GLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKA 238
Query: 334 TQVFREMI-KRGCEPTMHTYIMLLQG--HLG------------KRGRKGPDPLVNFDTIF 378
++++ ++ + P++ TY +++ G LG K+ K PD L F ++
Sbjct: 239 NEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPD-LFTFSSM- 296
Query: 379 VGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
+ GL KAG A K + ++ G+ YN L
Sbjct: 297 IHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAML 332
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 158/341 (46%), Gaps = 38/341 (11%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
N T+ + L E R +K ++M GC ++ N+++K C ++ + K +
Sbjct: 389 NTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYC---ILGDPKKAM 445
Query: 167 LKLSEWIK----PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETF 222
L ++ ++ N + Y +IKGYCD G+ A +I +LM D G +P ++I F
Sbjct: 446 LVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGF 505
Query: 223 FKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRG 278
KI+K + A +F M +DD GL TY +ID CK K+ A ++LE M + G
Sbjct: 506 CKISKMESAFGLFNEM----VDD-GLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSG 560
Query: 279 IEADNLTLSSIIYGLLARGRLREAYKV----VEEIEKPDISLYHGLIKGLLRLRRAREAT 334
+ T + +I+GL + A ++ +EE P++ Y +I GL + A
Sbjct: 561 CRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLAL 620
Query: 335 QVFREMIKRGCEPTMHTYIMLLQGHLGKRG-------------RKG--PDPLVNFDTIFV 379
++F +MI++GC P + TY L++ LG+ G R G PD + I
Sbjct: 621 EMFNKMIEQGCLPNLLTYSSLIRA-LGQEGKVEEAENLFAELERHGLIPDEITYVKMI-- 677
Query: 380 GGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE 420
+ +GK A ++ R++ G + + Y + NE
Sbjct: 678 EAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNE 718
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 114/285 (40%), Gaps = 17/285 (5%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
LSE ++PN + Y +I C G++ +A I + + P MI + +
Sbjct: 207 LSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDL 266
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
D A++VF M K + TY +I+ +C G++++A+ ++ EM GI T +
Sbjct: 267 DSALQVFNQM-AKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTG 325
Query: 289 IIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
I L G +A+++ +++ +P++ Y LI GL + A +F M + G
Sbjct: 326 PIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDG 385
Query: 345 CEPTMHTYIMLLQGHLGKR------------GRKGPDPLVNFDTIFVGGLVKAGKSLDAA 392
P TY L+ + R GR G P + + G G A
Sbjct: 386 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAM 445
Query: 393 KYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVG 437
+ ++ RG YN + Y + + +R+ G
Sbjct: 446 LVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG 490
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 89/419 (21%), Positives = 157/419 (37%), Gaps = 73/419 (17%)
Query: 63 TQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVR 122
++ QP N + +N +++ + K N+ ++++ + D TF M L R
Sbjct: 208 SEGVQP----NLLIYNAVINALCKDGNVADAETIMKKVFESEMSPD-TFTYTSMILGHCR 262
Query: 123 --ELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL----------- 169
+L + F+ M GCE + + ++ LC V EA LI ++
Sbjct: 263 KHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 322
Query: 170 -------------------------SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
++ +PN Y LI G C G L A +++ M+
Sbjct: 323 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMS 382
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
+G P+ + +I + + A V +M + + TY +I C G
Sbjct: 383 RDGVFPNTVTYNALINILVENRRIKYAFVVLNLMG-RNGCSPNIVTYNEMIKGYCILGDP 441
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGL 320
+A ++ M +RG A+ +T ++II G G A ++++ + KPD Y L
Sbjct: 442 KKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTEL 501
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVG 380
I G ++ + A +F EM+ G P TY L+ G+
Sbjct: 502 ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKD------------------ 543
Query: 381 GLVKAGKSLDAAKYVERVMNRGVEVPRFD-YNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
+ LD A + M R P YN +H + + EE+ K + E G+
Sbjct: 544 ------EKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGI 596
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 5/184 (2%)
Query: 179 AYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
AY L+ +G ++ M EG +P++ + + +I K +A + + +
Sbjct: 182 AYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV 241
Query: 239 RVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR 298
M TY +I C++ + A + +M K G E + +T S++I GL GR
Sbjct: 242 FESEMSPDTF-TYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGR 300
Query: 299 LREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIM 354
+ EA+ ++ E+ P G I L + +A ++F +M +GCEP ++TY
Sbjct: 301 VNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTA 360
Query: 355 LLQG 358
L+ G
Sbjct: 361 LISG 364
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 72/186 (38%), Gaps = 18/186 (9%)
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA--- 302
+GL Y ++ + + G + M G++ + L +++I L G + +A
Sbjct: 178 MGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETI 237
Query: 303 -YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG 361
KV E PD Y +I G R A QVF +M K GCEP TY L+ G L
Sbjct: 238 MKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLING-LC 296
Query: 362 KRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRF 408
GR G P + T + L G DA + + N+G E +
Sbjct: 297 DSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVY 356
Query: 409 DYNKFL 414
Y +
Sbjct: 357 TYTALI 362
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 135/358 (37%), Gaps = 47/358 (13%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
N +T+ ++D K +D L+ M R N +T+ + + L +
Sbjct: 529 NEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELC 588
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
+M + G ++ ++ LC+ A + K+ E PN + Y LI+
Sbjct: 589 KVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQE 648
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G + EA ++ + G P KMIE + K + A M +K L T
Sbjct: 649 GKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRM-IKAGCQPTLWT 707
Query: 251 YRIVIDWM--------------------CKRGKISQAYTMLEEMFKRGIEAD-NLTL--- 286
Y ++I + C G + + M + E D L++
Sbjct: 708 YGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQ 767
Query: 287 SSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIK 342
++++ L GR EA +++ + PD Y+ L+ LLR+R A VF+ M
Sbjct: 768 NALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMST 827
Query: 343 RGCEPTMHTY----IMLLQGHLGKRGRK----------GPDPLVNFDTIFVGGLVKAG 386
+GCE ++ Y L Q H K R PD +V + + GL++ G
Sbjct: 828 QGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQ--AVLIDGLLRDG 883
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 94/413 (22%), Positives = 187/413 (45%), Gaps = 24/413 (5%)
Query: 70 FAHNSITFNRMVD-IIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKM 127
F +++N ++D +I +++ + +EM + N T+ I + L+
Sbjct: 163 FMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMG 222
Query: 128 VNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKG 186
+ FF M GC ++ N ++ C+ + + EA K L L + + PN I+Y +I G
Sbjct: 223 LFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVING 282
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
C G + E S+I M+ + P + +I + + +A+ V VK
Sbjct: 283 LCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQAL-VLHAEMVKNGLSP 341
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
+ TY +I+ MCK G +++A L++M RG+ + T +++I G +G L++AY+++
Sbjct: 342 NVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIM 401
Query: 307 EEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
+E+ + P I Y+ LI G L R +A+ + +EMI+RG P + +Y ++ G
Sbjct: 402 KEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRN 461
Query: 363 RG------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY 410
+ KG P V + + GL K + + + +++ G+ Y
Sbjct: 462 QELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTY 521
Query: 411 NKFLHYYSNE----EGVVMFEEVGKKLREVGLADLADIFQRYGKKMATRERRR 459
++ Y E + + + +E+ +K + + + K+ T+E +R
Sbjct: 522 TSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKR 574
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 140/332 (42%), Gaps = 35/332 (10%)
Query: 70 FAHNSITFNRMVD---IIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELK 125
F IT+N +++ I+G+ + LQEM R + D ++ + +EL+
Sbjct: 409 FTPTIITYNALINGHCILGRMEDASGL---LQEMIERGFIPDVVSYSTIISGFCRNQELE 465
Query: 126 KMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLI 184
K M G + + +++ LC+++ + E L + LS + P+E+ Y LI
Sbjct: 466 KAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLI 525
Query: 185 KGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM------ 238
YC GDL +A ++ + M +GF P I + +I F K ++ EA ++ +
Sbjct: 526 NAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESV 585
Query: 239 --------RVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
+ ++L + ++ C +G +++A +LE M ++G + + + II
Sbjct: 586 PNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVII 645
Query: 291 YGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
+G G + +AY + +E+ P L K L + E Q+ +K C
Sbjct: 646 HGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLK-SCR 704
Query: 347 PTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIF 378
T +L G K G N D +F
Sbjct: 705 ITEAALAKVLIGINSKEG--------NMDAVF 728
>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 127/247 (51%), Gaps = 6/247 (2%)
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAK-YLILKLSEWIKPNEIA 179
V +LK V+ F+ M + +V C+ V EAK L + + + IKP +
Sbjct: 155 VGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVT 214
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
Y L+ GY V + +A I+N M G P I +I F KI DEAM++ + M
Sbjct: 215 YNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMH 274
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
K++ + TY +ID +CK GKIS A +++EM RG + +T SSI+ L ++
Sbjct: 275 HKQIIP-NVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQV 333
Query: 300 REAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
A ++ +++ +P++ Y LIKGL + + +A +VF +++ +G ++TY ++
Sbjct: 334 DNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVM 393
Query: 356 LQGHLGK 362
+QG K
Sbjct: 394 IQGFCDK 400
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 110/227 (48%), Gaps = 6/227 (2%)
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIA 179
V+++ K + F+ M G ++ + ++ C+ K++ EA L+ ++ + I PN +
Sbjct: 225 VKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVT 284
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
Y LI G C G + A K+ + M D G P+I +++ K ++ D A+ + M+
Sbjct: 285 YSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMK 344
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
+ + + TY I+I +C+ GK+ A + E++ +G + T + +I G +G
Sbjct: 345 NQGIQP-NMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLF 403
Query: 300 REAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIK 342
EA ++ ++E P+ Y +I L + A ++ EMI+
Sbjct: 404 DEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIE 450
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 112/274 (40%), Gaps = 43/274 (15%)
Query: 146 LNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
NK++ +L + K YL K+ IKPN + LI +C +G + A + +
Sbjct: 65 FNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKIL 124
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
G++P+ ++ +I+ GL + D C GK+
Sbjct: 125 KMGYKPNTITLNTLIK--------------------------GLCLNGKIHDKHCIVGKL 158
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGL 320
A + +M I D T + ++ G GR++EA V+ + KP + Y+ L
Sbjct: 159 KDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSL 218
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------------LGKRGRKGP 368
+ G +++ +A +F M + G P + +Y +L+ G L + K
Sbjct: 219 MDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQI 278
Query: 369 DPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
P V + + GL K+GK A K V+ + +RG
Sbjct: 279 IPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRG 312
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 101/212 (47%), Gaps = 11/212 (5%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHIM 134
+++ +++ K + +D E L+EM ++++ N T+ + L + ++ + M
Sbjct: 249 SYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEM 308
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDL 193
+D G ++ + ++ LC+ V A L+ ++ ++ I+PN Y LIKG C G L
Sbjct: 309 HDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKL 368
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL----S 249
+A K++ + +G ++ MI+ F DEA+ + + +M+D G
Sbjct: 369 EDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTL-----LSKMEDNGCIPNAK 423
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEA 281
TY I+I + K+ + A +L EM + +
Sbjct: 424 TYEIIILSLFKKDENEMAEKLLCEMIETNFDG 455
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 162/359 (45%), Gaps = 36/359 (10%)
Query: 78 NRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDC 137
NR+ DII +DLF + ++ +V F L +A++ + + +++ M
Sbjct: 56 NRLSDIIKVDDAVDLFGDMVKSRPFPSIVE---FNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEA 196
G + L + + C+R + A ++ K+ + +P+ + L+ GYC + +A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVID 256
+ + M + G++P +I F NK EA+ + M V+R L TY V++
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQM-VQRGCQPDLVTYGTVVN 231
Query: 257 WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KP 312
+CKRG I A ++L++M K IEAD + ++II GL + +A + E++ +P
Sbjct: 232 GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRP 291
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLV 372
D+ Y LI L R +A+++ +MI+R P + T+
Sbjct: 292 DVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTF-------------------- 331
Query: 373 NFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY----NKFLHYYSNEEGVVMFE 427
+ + VK GK ++A K + ++ R ++ F Y N F + +E MFE
Sbjct: 332 ---SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 387
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 129/291 (44%), Gaps = 18/291 (6%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEA 196
GC+ L VV LC+R + A L+ K+ + I+ + + Y +I G C + +A
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDA 277
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVID 256
++ M ++G P + +I + +A ++ M ++R + + T+ +ID
Sbjct: 278 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM-IERKINPNVVTFSALID 336
Query: 257 WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE-EIEK---P 312
K GK+ +A + +EM KR I+ D T SS+I G RL EA + E I K P
Sbjct: 337 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 396
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG-------- 364
++ Y LIKG + +R E ++FREM +RG TY L+ G R
Sbjct: 397 NVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 456
Query: 365 ----RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
G P + I + GL K GK A E + +E + YN
Sbjct: 457 KQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYN 507
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 143/316 (45%), Gaps = 20/316 (6%)
Query: 140 EYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASK 198
E + + N ++ LC+ K + +A L ++ ++ I+P+ Y LI C+ G +AS+
Sbjct: 255 EADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 314
Query: 199 IWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWM 258
+ + M + P++ +I+ F K K EA K++ M +KR D + TY +I+
Sbjct: 315 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM-IKRSIDPDIFTYSSLINGF 373
Query: 259 CKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDI 314
C ++ +A M E M + + +T S++I G R+ E ++ E+ + +
Sbjct: 374 CMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 433
Query: 315 SLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG---------- 364
Y LI G + R A VF++M+ G P + TY +LL G L K G
Sbjct: 434 VTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDG-LCKNGKLAKAMVVFE 492
Query: 365 ---RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEE 421
R +P + I + G+ KAGK D + + +GV YN + + +
Sbjct: 493 YLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKG 552
Query: 422 GVVMFEEVGKKLREVG 437
+ + KK++E G
Sbjct: 553 SKEEADSLLKKMKEDG 568
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 137/288 (47%), Gaps = 39/288 (13%)
Query: 210 PSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKIS 265
PSI +K++ K+NK + + + + M+ LG+S TY I I+ C+R ++S
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQT-----LGISHDLYTYSIFINCFCRRSQLS 135
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLI 321
A +L +M K G E D +TLSS++ G R+ +A +V+++ KPD + LI
Sbjct: 136 LALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLI 195
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG------------RKGP- 368
GL +A EA + +M++RGC+P + TY ++ G L KRG KG
Sbjct: 196 HGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG-LCKRGDIDLALSLLKKMEKGKI 254
Query: 369 -DPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN-----EEG 422
+V ++TI + GL K DA + N+G+ F Y+ + N +
Sbjct: 255 EADVVIYNTI-IDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS 313
Query: 423 VVMFEEVGKKLRE--VGLADLADIFQRYGKKMATR---ERRRNRAIEP 465
++ + + +K+ V + L D F + GK + + R+I+P
Sbjct: 314 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 361
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/379 (21%), Positives = 161/379 (42%), Gaps = 52/379 (13%)
Query: 36 NLTHEFFLQICNNFPLSWRPVYLFFQYTQKA-QPCFAHNSITFNRMVDIIGKSRNIDLFW 94
L H FL + V L Q Q+ QP + +T+ +V+ + K +IDL
Sbjct: 193 TLIHGLFLH-----NKASEAVALVDQMVQRGCQP----DLVTYGTVVNGLCKRGDIDLAL 243
Query: 95 ETLQEMGRRRLVNDKT-FKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTL 153
L++M + ++ D + + L + + + +N F M++ G + + ++ L
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
Query: 154 CQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSI 212
C +A L+ + E I PN + + LI + G L+EA K+++ M +P I
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 363
Query: 213 DVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLE 272
+I F ++ DEA +F++M K + TY +I CK ++ + +
Sbjct: 364 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFP-NVVTYSTLIKGFCKAKRVEEGMELFR 422
Query: 273 EMFKRGIEADNLTLSSIIYG-----------------------------------LLARG 297
EM +RG+ + +T +++I+G L G
Sbjct: 423 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 482
Query: 298 RLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYI 353
+L +A V E +++ PDI Y+ +I+G+ + + + ++F + +G P + Y
Sbjct: 483 KLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYN 542
Query: 354 MLLQGHLGKRGRKGPDPLV 372
++ G K ++ D L+
Sbjct: 543 TMISGFCRKGSKEEADSLL 561
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 146/330 (44%), Gaps = 24/330 (7%)
Query: 22 PESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMV 81
P+ +SSL SC +CN S L +K P N +TF+ ++
Sbjct: 291 PDVFTYSSLISC-----------LCNYGRWSDASRLLSDMIERKINP----NVVTFSALI 335
Query: 82 DIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIMNDCGCE 140
D K + + EM +R + D T+ + L + + F +M C
Sbjct: 336 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 395
Query: 141 YSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKI 199
++ + ++K C+ K V E L ++S+ + N + Y LI G+ D A +
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 455
Query: 200 WNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMC 259
+ M G P+I + +++ K K +AM VF+ ++ M+ + TY I+I+ MC
Sbjct: 456 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP-DIYTYNIMIEGMC 514
Query: 260 KRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDIS 315
K GK+ + + + +G+ + + +++I G +G EA +++++++ P+
Sbjct: 515 KAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSG 574
Query: 316 LYHGLIKGLLRLRRAREATQVFREMIKRGC 345
Y+ LI+ LR + ++ +EM R C
Sbjct: 575 TYNTLIRARLRDGDREASAELIKEM--RSC 602
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 171/373 (45%), Gaps = 63/373 (16%)
Query: 109 KTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK 168
+T+ + + L+ + +N F+ M + GCE ++ ++ LC+ + EA+ ++ +
Sbjct: 300 RTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSE 359
Query: 169 LSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINK 227
+SE + P+ + Y LI GYC G + +A +I +LM P+ +++I K K
Sbjct: 360 MSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRK 419
Query: 228 DDEAMKVFQMMRVKR------------------------------MDDLGLS----TYRI 253
+AM + M ++ M++ GL TY +
Sbjct: 420 VHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSV 479
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK-- 311
ID +CK G++ +A T+ + + +G++A+ + +++I G G++ AY ++E +
Sbjct: 480 FIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDA 539
Query: 312 --PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPD 369
P+ Y+ LI+GL + ++ +EA+ + +M+ G +PT+ TY
Sbjct: 540 CLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTY----------------- 582
Query: 370 PLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEV 429
TI +G ++K G A K +++ G + Y FLH Y ++ + ++V
Sbjct: 583 ------TILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDV 636
Query: 430 GKKLREVG-LADL 441
K+ E G L DL
Sbjct: 637 IAKMNEEGILPDL 649
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 125/258 (48%), Gaps = 17/258 (6%)
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
NE++Y LI G C+ G + EA K++ MT++ P++ +I + EA+ +F
Sbjct: 263 NEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLF 322
Query: 236 QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
M+ K + + TY ++ID +CK K+ +A ML EM ++G+ +T +++I G
Sbjct: 323 NEMKEKGCEP-NVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCK 381
Query: 296 RGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
G + +A+++++ +E P+ Y+ LI GL + R+ +A + +M++R P++ T
Sbjct: 382 EGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLIT 441
Query: 352 YIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVM 399
Y L+ G L G P ++F+ L K G+ +A + V
Sbjct: 442 YNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVK 501
Query: 400 NRGVEVPRFDYNKFLHYY 417
+GV+ Y + Y
Sbjct: 502 AKGVKANEVIYTALIDGY 519
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 166/387 (42%), Gaps = 26/387 (6%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N+ T+N ++ + K R + L +M R+L T+ + +V +L+
Sbjct: 403 NTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLL 462
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
+MN+ G + + TLC+ V EA L + ++ +K NE+ Y LI GYC V
Sbjct: 463 SLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKV 522
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS- 249
G + A + M ++ P+ + +IE K K EA + V +M +G+
Sbjct: 523 GKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSL-----VAKMLTMGVKP 577
Query: 250 ---TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
TY I+I M K G A + M G + D T ++ ++ ++G L E V+
Sbjct: 578 TVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVI 637
Query: 307 EEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
++ + PD+ Y LI G RL A + M+ GC+P+++ +L++ +
Sbjct: 638 AKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHE 697
Query: 363 RGRKGPDPLVNFDTIFVGGLVKAGKSLD---AAKYVERVMNRGVEVPRFDYNKFLHYYSN 419
K + D++ +L+ A K E+++ G + Y + +
Sbjct: 698 NRMKETRSEIGIDSV--------SNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQ 749
Query: 420 EEGVVMFEEVGKKLREVGLADLADIFQ 446
+E + + + ++E G++ DI+
Sbjct: 750 QERLEEAQGLVHHMKERGMSPSEDIYN 776
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 170/390 (43%), Gaps = 42/390 (10%)
Query: 49 FPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND 108
F L + FF + +P F HN +++ M++I+ ++R + V +
Sbjct: 77 FNLDPQTALSFFNWIA-LRPGFKHNVHSYSSMLNILIRARLLG--------------VAE 121
Query: 109 KTFKIALMTLAEVRELKKMVNFFHIMNDCGCEY----SLEMLNKVVKTLCQRKLVVEAKY 164
K + + + ++ ++ F MN G E+ +L N ++ +L + L+ E K
Sbjct: 122 KIRISMIKSCCSIEDVLFVLEVFRKMNADG-EFKFKPTLRCYNTILMSLSKFLLIDEMKT 180
Query: 165 LILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFF 223
+ L+L + I PN + ++ GYC +G+++EA + + G P +I
Sbjct: 181 VYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHC 240
Query: 224 KINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADN 283
+ D A +VF +M K +S Y +I +C+ G+I++A + +M +
Sbjct: 241 RNKGVDNAYEVFLIMPQKGCQRNEVS-YTNLIHGLCEAGRINEALKLFADMTEDNCCPTV 299
Query: 284 LTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFRE 339
T + +IY L GR EA + E++ +P++ Y LI GL + + EA ++ E
Sbjct: 300 RTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSE 359
Query: 340 MIKRGCEPTMHTYIMLLQGH--------------LGKRGRKGPDPLVNFDTIFVGGLVKA 385
M ++G P++ TY L+ G+ L + GP+ + + GL K
Sbjct: 360 MSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNE--LICGLCKK 417
Query: 386 GKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
K A + +++ R + YN +H
Sbjct: 418 RKVHKAMALLNKMLERKLSPSLITYNSLIH 447
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 99/237 (41%), Gaps = 32/237 (13%)
Query: 147 NKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N +++ LC+ K + EA L+ K L+ +KP + Y LI G A K++N M
Sbjct: 548 NVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVS 607
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG----LSTYRIVIDWMCKR 261
G++P + + +F +E V + +M++ G L TY ++ID +
Sbjct: 608 LGYQPDVCTYTAFLHAYFSQGMLEEVDDV-----IAKMNEEGILPDLVTYTVLIDGYARL 662
Query: 262 GKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA------------------- 302
G +A+ L+ M G + +S +I L R++E
Sbjct: 663 GLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIAL 722
Query: 303 ---YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
K+VE D+S+Y LI G + R EA + M +RG P+ Y LL
Sbjct: 723 KLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLL 779
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 106/240 (44%), Gaps = 24/240 (10%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI--- 166
T+ + + A + + +F M D GC+ SL +++ ++K L + E + I
Sbjct: 651 TYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGID 710
Query: 167 -----------LKLSEWIKPNEIA-----YGWLIKGYCDVGDLIEASKIWNLMTDEGFEP 210
LKL E + + YG LI G+C L EA + + M + G P
Sbjct: 711 SVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSP 770
Query: 211 SIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTM 270
S D+ + +++ K+ EA+++ M + L L +Y++++ + G +A +
Sbjct: 771 SEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPL-LESYKLLVCGLYIEGSNEKAKAV 829
Query: 271 LEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLR 326
+ G D + +I GLL R + E ++++ +E +P+ Y LI+GL R
Sbjct: 830 FHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGLER 889
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 94/202 (46%), Gaps = 19/202 (9%)
Query: 95 ETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLC 154
ET E+G + N ++IAL F M + GC + + ++ C
Sbjct: 702 ETRSEIGIDSVSNTLEYEIAL-------------KLFEKMVEHGCTIDVSIYGALIAGFC 748
Query: 155 QRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSID 213
Q++ + EA+ L+ + E + P+E Y L+ C +G EA ++ + M + G P ++
Sbjct: 749 QQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLE 808
Query: 214 VVDKMIETFFKINKDDEAMKVFQMMRV--KRMDDLGLSTYRIVIDWMCKRGKISQAYTML 271
++ + +++A VF + D++ ++++ID + KR + + ++
Sbjct: 809 SYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVA---WKVLIDGLLKRDLVDECSELI 865
Query: 272 EEMFKRGIEADNLTLSSIIYGL 293
+ M ++G + + LT S +I GL
Sbjct: 866 DIMEEKGCQPNPLTYSLLIEGL 887
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 73/380 (19%), Positives = 148/380 (38%), Gaps = 95/380 (25%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALMTLAEVRELKKMVNFF 131
N + + ++D K ID+ + L+ M L N T+ + + L + +++K+ +
Sbjct: 508 NEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLV 567
Query: 132 --------------------HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYL------ 165
++ D +++L++ N +V Q + +L
Sbjct: 568 AKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQ 627
Query: 166 ---------ILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVV 215
I K++E I P+ + Y LI GY +G A M D G +PS+ +V
Sbjct: 628 GMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIV 687
Query: 216 DKMIETFFKINKDDE------------------AMKVFQMMRVKRMDDLGLSTYRIVIDW 257
+I+ N+ E A+K+F+ M V+ + +S Y +I
Sbjct: 688 SILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKM-VEHGCTIDVSIYGALIAG 746
Query: 258 MCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDI--- 314
C++ ++ +A ++ M +RG+ +S++ G EA ++V+ + + +
Sbjct: 747 FCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPL 806
Query: 315 ---------------------SLYHGL---------------IKGLLRLRRAREATQVFR 338
+++HGL I GLL+ E +++
Sbjct: 807 LESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELID 866
Query: 339 EMIKRGCEPTMHTYIMLLQG 358
M ++GC+P TY +L++G
Sbjct: 867 IMEEKGCQPNPLTYSLLIEG 886
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 142/300 (47%), Gaps = 8/300 (2%)
Query: 65 KAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRE 123
+A+ C A + IT+N +V+ I + +D E L+ + N ++ I L L
Sbjct: 218 RAKGC-APDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAER 276
Query: 124 LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGW 182
+ M+ G ++ N ++ LC+R LV A ++ ++ ++ PN ++Y
Sbjct: 277 WEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNP 336
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
++ +C + A LM G P I + ++ + + D A+++ ++ K
Sbjct: 337 ILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKG 396
Query: 243 MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
+ L +Y VID + K GK +A +L EM +G++ D +T S+I GL R+ EA
Sbjct: 397 CTPV-LISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEA 455
Query: 303 YKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+ +++ +P+ LY+ ++ GL + R A +F MI GC P TY +L++G
Sbjct: 456 IRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEG 515
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 37/278 (13%)
Query: 149 VVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGF 208
++K LC EA+ ++ +P+ +AY ++ GYC G L A + L+ D
Sbjct: 100 LIKKLCASGRTAEARRVL----AACEPDVMAYNAMVAGYCVTGQLDAARR---LVADMPM 152
Query: 209 EPSIDVVDKMIETFFKINKDDEAMKVFQ-MMRVKRMDDLGLSTYRIVIDWMCKRGKISQA 267
EP + +I + A+ V M+R + D+ TY I+++ CKR QA
Sbjct: 153 EPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDV--VTYTILLEATCKRSGYKQA 210
Query: 268 YTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKG 323
+L+EM +G D +T + ++ G+ GR+ +A + ++ + +P+ Y+ ++KG
Sbjct: 211 MKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKG 270
Query: 324 LLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLV 383
L R +A ++ EM ++G P + T+ ML+ L +RG P
Sbjct: 271 LCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLIS-FLCRRGLVEP--------------- 314
Query: 384 KAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEE 421
A + ++++ G YN LH + ++
Sbjct: 315 -------AMEVLDQIPKYGCTPNSLSYNPILHAFCKQK 345
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 95/214 (44%), Gaps = 3/214 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFF 131
NS+++N ++ K + +D ++ M R D ++ L L E+ V
Sbjct: 330 NSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELL 389
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
H + D GC L N V+ L + EA L+ ++ ++ ++P+ I Y + G C
Sbjct: 390 HQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCRE 449
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
+ EA + + + D G P+ + + ++ K + A+ +F M + ST
Sbjct: 450 DRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYM-ISNGCMPNEST 508
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNL 284
Y I+I+ + G + +A +L E+ RG+ + L
Sbjct: 509 YTILIEGLTYEGLVKEARELLGELCSRGVVSKGL 542
>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
Length = 1315
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 108/420 (25%), Positives = 186/420 (44%), Gaps = 79/420 (18%)
Query: 83 IIGKSRNIDLF----WETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCG 138
I+G RN ++ W + M R +V++ T + + E + + V FFH + G
Sbjct: 838 IVGYCRNGNVLEADRW-ICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMG 896
Query: 139 CEYSLEMLNKVVKTLCQRKLVVEAKYLILKL--SEWIKPNEIAYGWLIKGYCDVGDLIEA 196
+L + ++ LC+R V +A L+ ++ + W KPN + LI G C G A
Sbjct: 897 LSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGW-KPNVYTHTSLIHGLCKKGWTERA 955
Query: 197 SKIW-NLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL----STY 251
+++ L+ + ++P++ MI + K K A +F+ RM + GL +TY
Sbjct: 956 FRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFE-----RMKEQGLVPNTNTY 1010
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE---- 307
+ID CK G S+AY ++E M G + T +SI+ GL RGR EA+K++
Sbjct: 1011 TTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQ 1070
Query: 308 -EIE----------------------------------KPDISLYHGLIKGLLRLRRARE 332
+IE +PDI LY LI R ++
Sbjct: 1071 NQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKD 1130
Query: 333 ATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG--------RKGPDPLVNFDTI----FVG 380
+ ++F E+IK G PT TY ++ G+ ++ +K D D+I +
Sbjct: 1131 SEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALIS 1190
Query: 381 GLVKAGKSLDAAKYVERVMNRGV---EVPR----FDYNKFLHYYSNEEGVVMFEEVGKKL 433
GL K + +A + + ++++G+ EV R ++Y K + S +V+ E + KKL
Sbjct: 1191 GLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFAS---AMVILERLNKKL 1247
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 145/316 (45%), Gaps = 29/316 (9%)
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPN 176
AE+ +LK+ V+ M + G + ++N+++ + +LV A + ++S + P+
Sbjct: 771 FAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPD 830
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
Y ++I GYC G+++EA + M + GF + +I F + + + A+ F
Sbjct: 831 SCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFH 890
Query: 237 MMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
++ +GLS Y +I +CKRG + QA+ +LEEM K G + + T +S+I+G
Sbjct: 891 -----KVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHG 945
Query: 293 LLARGRLREAYKVV-----EEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
L +G A+++ + KP++ Y +I G + + A +F M ++G P
Sbjct: 946 LCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVP 1005
Query: 348 TMHTYIMLLQGHLGKRG-------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKY 394
+TY L+ GH K G +G P V GL K G++ +A K
Sbjct: 1006 NTNTYTTLIDGHC-KAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKL 1064
Query: 395 VERVMNRGVEVPRFDY 410
+ +E Y
Sbjct: 1065 LNTGFQNQIEADGVTY 1080
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 167/365 (45%), Gaps = 34/365 (9%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHI 133
+T+N ++ + K++ +D E L M + ++ D T+ L + K+ + F
Sbjct: 232 VTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKK 291
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M G E + + ++ LC+ +EA+ + +++ +KP YG L++GY G
Sbjct: 292 MRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGA 351
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
L+E + +LM G P V +I + K D+AM VF MR + ++ + TY
Sbjct: 352 LVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAV-TYG 410
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP 312
VI +CK G++ A E+M G+ N+ +S+I+GL + A +++ E+
Sbjct: 411 AVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDR 470
Query: 313 DISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGP 368
I L ++ +I + R E+ ++F M++ G +P + TY L+ G+
Sbjct: 471 GICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGY--------- 521
Query: 369 DPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN----EEGVV 424
AGK +A K + +++ G++ Y+ ++ Y E+ +V
Sbjct: 522 --------------CLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALV 567
Query: 425 MFEEV 429
+F+E+
Sbjct: 568 LFKEM 572
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 146/313 (46%), Gaps = 19/313 (6%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNID---LFWETLQEMGRRRLVNDKTFKIALMTL 118
+++ Q N++T+ ++ I+ KS ++ L++E + + G + + + L
Sbjct: 394 FSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSP--GNIVYNSLIHGL 451
Query: 119 AEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNE 177
+ ++ M D G + N ++ + C+ V+E++ L L + +KPN
Sbjct: 452 CTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNV 511
Query: 178 IAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQM 237
I Y LI GYC G + EA K+ + M G +P+ +I + KI++ ++A+ +F
Sbjct: 512 ITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLF-- 569
Query: 238 MRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
K M+ G+S TY I++ + + + + A + + + G + + T + I++GL
Sbjct: 570 ---KEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGL 626
Query: 294 LARGRLREAYKVVEEIEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
+A ++ + + D+ L ++ +I LL++ R EA +F G P
Sbjct: 627 CKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNY 686
Query: 350 HTYIMLLQGHLGK 362
TY ++ + +G+
Sbjct: 687 WTYRLMAENIIGQ 699
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 130/294 (44%), Gaps = 29/294 (9%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKI-WNLMTDEGFEPSIDVVDKMIETFFKINK 227
+ + + + IA+ L+KG C +A I MT+ G P++ + +++ N+
Sbjct: 114 IKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENR 173
Query: 228 DDEAMKVFQMMRVKRMDDLG------LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEA 281
EA+++ MM DD G + +Y VI+ K G +AY+ EM RGI
Sbjct: 174 SQEALELLHMM----ADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILP 229
Query: 282 DNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVF 337
D +T +SII L + +A +V+ + K PD Y+ ++ G + +EA
Sbjct: 230 DVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFL 289
Query: 338 REMIKRGCEPTMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVK 384
++M G EP + TY +L+ +L K GR +G P + + G
Sbjct: 290 KKMRSDGVEPDVVTYSLLMD-YLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYAT 348
Query: 385 AGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
G ++ ++ ++ G+ + ++ + Y+N+ V V K+R+ GL
Sbjct: 349 KGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGL 402
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 85/199 (42%), Gaps = 29/199 (14%)
Query: 225 INKDDEAMKVFQMMRVKRM--DDL--GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIE 280
+ +D A V + R+ R D++ L TY I+I C+ G++ + L + K+G
Sbjct: 60 VARDSPAAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFR 119
Query: 281 ADNLTLSSIIYGLLARGRLREAYKVV-----EEIEKPDISLYHGLIKGLLRLRRAREATQ 335
D + + ++ GL A R +A +V E P++ Y+ L+KGL R++EA +
Sbjct: 120 VDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALE 179
Query: 336 VFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYV 395
+ M RG P +V++ T+ + G K G S A
Sbjct: 180 LLHMMAD-------------------DRGGGSPPDVVSYTTV-INGFFKEGDSDKAYSTY 219
Query: 396 ERVMNRGVEVPRFDYNKFL 414
+++RG+ YN +
Sbjct: 220 HEMLDRGILPDVVTYNSII 238
>gi|297743427|emb|CBI36294.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 145/320 (45%), Gaps = 40/320 (12%)
Query: 86 KSRNIDLFWETLQEMGRRRL--VNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSL 143
S+ L W+ L +M R + + F + + FH M D G + +
Sbjct: 99 SSKQFPLIWDFLSDMRETRCCEICPEIFWLIFRAYCRANLPGDAIRAFHQMGDFGVKAGV 158
Query: 144 EMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLM 203
+++++ LC+RK V +A+ K++ + PN Y L++G+ DVGD EA K++ M
Sbjct: 159 GDVDQLLYVLCKRKHVKQAQEFFDKVNVEVMPNAKTYSILMRGWGDVGDSSEARKLFEEM 218
Query: 204 TDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM------------------------- 238
+ G + + ++E K DEA K+F+ M
Sbjct: 219 RERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDI 278
Query: 239 --------RVKRMDDL-GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSI 289
R++R + + + TY ++ +CK K+ +AY +L+EM +RG+ D + ++I
Sbjct: 279 HSAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAI 338
Query: 290 IYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGC 345
+ +A +++ +EK PD Y+ ++K LLR+ R T V+ M +RG
Sbjct: 339 QAFHCDHCEVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRFDRVTDVWGGMEERGF 398
Query: 346 EPTMHTYIMLLQGHLGKRGR 365
P TY +++ G K+G+
Sbjct: 399 YPAASTYAVMVHGFCKKKGK 418
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 101/219 (46%), Gaps = 4/219 (1%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVN 129
A + + +N +++ + K N+D ++ +EMG L D ++ I + EV ++
Sbjct: 224 AVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQ 283
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYC 188
M ++ N +VK LC+ + V EA L+ ++ E + P+ +Y + +C
Sbjct: 284 VLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQAFHC 343
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
D ++ +A ++ + M E P + +++ ++ + D V+ M +R
Sbjct: 344 DHCEVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRFDRVTDVWGGME-ERGFYPAA 402
Query: 249 STYRIVIDWMC-KRGKISQAYTMLEEMFKRGIEADNLTL 286
STY +++ C K+GK+ +A E M GI + T+
Sbjct: 403 STYAVMVHGFCKKKGKLEEACKYFEMMIDDGIPPYSCTV 441
>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 151/290 (52%), Gaps = 7/290 (2%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIM 134
++N ++ + ID+ E EM R D+ T+ + L + + ++ M+ M
Sbjct: 768 SYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEM 827
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDL 193
++ G + + N ++ L + K++ EA L +L SE P YG L+ G G++
Sbjct: 828 HNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNI 887
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
+A +++ M + G EP+ + + ++ + ++ ++F+ M + M+ + +Y +
Sbjct: 888 EDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNP-DIKSYTV 946
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK-- 311
VID +C G+++ + +++ G+E D +T + +I+GL GRL EA + ++EK
Sbjct: 947 VIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKG 1006
Query: 312 --PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
P++ Y+ LI L + +A EA +++ E++ +G +P + TY L++G+
Sbjct: 1007 IAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGY 1056
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 144/325 (44%), Gaps = 45/325 (13%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIM 134
T++ ++ GK R+ + L EM R + N ++ I + L + L++ M
Sbjct: 208 TYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKM 267
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDL 193
+ GC+ + +++ LC + +AK + K+ + KP+ + Y L+ D GD
Sbjct: 268 EEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDS 327
Query: 194 IEASKIWNLMTDEGF--------------------EPSIDVVDKM--------------- 218
S+IWN + +G+ + ++DV D+M
Sbjct: 328 RSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSL 387
Query: 219 IETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRG 278
I F K ++ + A+++F M + G T+ + I++ K G+ +A E M +G
Sbjct: 388 ISGFLKADRFNRALELFNHMNIHGPTPNGY-THVLFINYHGKSGESLKALKRYELMKSKG 446
Query: 279 IEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREAT 334
I D + ++++YGL GRL A +V E++ PD Y +IK + A EA
Sbjct: 447 IVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAM 506
Query: 335 QVFREMIKRGCEP---TMHTYIMLL 356
++F EMI+ C P M++ I +L
Sbjct: 507 KIFAEMIENRCAPDVLAMNSLIDML 531
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 138/318 (43%), Gaps = 56/318 (17%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
I P+ I Y +IK + EA KI+ M + P + ++ +I+ +K + +EA
Sbjct: 482 ISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAW 541
Query: 233 KVFQMMR-----------------------VKRMDDL-----------GLSTYRIVIDWM 258
K+F ++ VK + L + TY V+D +
Sbjct: 542 KIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCL 601
Query: 259 CKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK---PDIS 315
CK G+++ A ML M G D + ++++YGL+ GRL EA+ + +++K PD +
Sbjct: 602 CKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQMKKVLAPDYA 661
Query: 316 LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYI-MLLQGHLGKRGRKGPDPLVNF 374
++ +R +EA RE I + + + L++G L R G + + F
Sbjct: 662 TVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGIL---KRDGTEKSIEF 718
Query: 375 -----------DTIFVGGLV----KAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN 419
D +F+ ++ K ++L A + V++ N GV + YN + +
Sbjct: 719 AENIASSGLLLDDLFLSPIIRHFCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVD 778
Query: 420 EEGVVMFEEVGKKLREVG 437
E+ + + EE+ +++ +G
Sbjct: 779 EDLIDIAEELFSEMKRLG 796
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 89/474 (18%), Positives = 176/474 (37%), Gaps = 101/474 (21%)
Query: 52 SWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKT 110
+W+ Y + + C T+N ++ +G+ + + L+ M N T
Sbjct: 540 AWKIFYELKEMNLEPTDC------TYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIIT 593
Query: 111 FKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS 170
+ L L + E+ ++ + M GC L N V+ L + + EA ++ ++
Sbjct: 594 YNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQMK 653
Query: 171 EWIKPNEIAYGWLIKGYCDVGDLIEA-----------------SKIWNLMTD----EGFE 209
+ + P+ ++ + G + EA S + +LM +G E
Sbjct: 654 KVLAPDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTE 713
Query: 210 PSIDVVDKMIETFFKIN------------KDDEAMKVFQMMRVKRMDDLGLS----TYRI 253
SI+ + + + ++ K EA+ ++ VK+ ++LG+S +Y
Sbjct: 714 KSIEFAENIASSGLLLDDLFLSPIIRHFCKHKEALAAHEL--VKKFENLGVSLKTGSYNA 771
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE--- 310
+I + I A + EM + G + D T I+ + R+ + K+ EE+
Sbjct: 772 LICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKG 831
Query: 311 -KPDISLYHGLIKGLLRLRRAREATQ---------------------------------- 335
K Y+ +I GL++ + EA
Sbjct: 832 YKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAE 891
Query: 336 -VFREMIKRGCEPTMHTYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGL 382
+F EM++ GCEP Y +LL G+ +G +P + T+ + L
Sbjct: 892 ALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTL 951
Query: 383 VKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN----EEGVVMFEEVGKK 432
G+ D Y +++ + G+E YN +H EE + ++ ++ KK
Sbjct: 952 CADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKK 1005
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 114/286 (39%), Gaps = 40/286 (13%)
Query: 75 ITFNRMVDIIGKSRNID----LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNF 130
+T+N ++ + KS+ +D L+++ + E T+ L L + ++
Sbjct: 837 VTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPC---TYGPLLDGLLKDGNIEDAEAL 893
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCD 189
F M +CGCE + + N ++ + L + E + P+ +Y +I C
Sbjct: 894 FDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCA 953
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
G L + + +TD G EP + + +I K + +EA+ ++ M K + L
Sbjct: 954 DGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAP-NLY 1012
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
TY +I ++ K GK ++A M EE+ +G
Sbjct: 1013 TYNSLILYLGKAGKAAEAGKMYEELLAKGW------------------------------ 1042
Query: 310 EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
KP++ Y+ LI+G A + MI GC P TY+ L
Sbjct: 1043 -KPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQL 1087
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 114/273 (41%), Gaps = 32/273 (11%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
++PN +Y I+ G L EA +I M +EG +P + +I+ + +A
Sbjct: 237 VRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAK 296
Query: 233 KVFQMMRV--KRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
VF M+ ++ D + TY ++D G + + G + ++ ++ +
Sbjct: 297 DVFWKMKASDQKPDRV---TYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAV 353
Query: 291 YGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
L GR+ EA V +E+++ P Y+ LI G L+ R A ++F M G
Sbjct: 354 DALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPT 413
Query: 347 PTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
P +T+++ + H K+G+SL A K E + ++G+
Sbjct: 414 PNGYTHVLFINYH-----------------------GKSGESLKALKRYELMKSKGIVPD 450
Query: 407 RFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLA 439
N L+ + + M + V +L+ +G++
Sbjct: 451 VVAGNAVLYGLAKTGRLGMAKRVFHELKAMGIS 483
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 99/224 (44%), Gaps = 35/224 (15%)
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPD 313
+++ M G++ + + M ++ I+A+ T ++ + G LR A + +++
Sbjct: 107 MLELMRAHGRVGDVAQVFDLMQRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAG 166
Query: 314 ISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL------------Q 357
I L Y+GLI L++ REA V++ M G PT+ TY +L+
Sbjct: 167 IVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVV 226
Query: 358 GHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
G LG+ +G P V TI + L +AG+ +A + + ++ G + P N L
Sbjct: 227 GLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCK-PDVVTNTVL--- 282
Query: 418 SNEEGVVMFEEVGKKLREVGLADLADIFQRYGKKMATRERRRNR 461
+ + + G+ LAD D+F KM +++ +R
Sbjct: 283 -----IQILCDAGR------LADAKDVFW----KMKASDQKPDR 311
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 124/268 (46%), Gaps = 15/268 (5%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
N T+ + L E E+ + F++M GC + N++++ C +A ++
Sbjct: 399 NTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSML 458
Query: 167 LK-LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI 225
L P + Y +IKGYCD GD A ++ LM G +P ++I F KI
Sbjct: 459 TNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKI 518
Query: 226 NKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEA 281
+K + A +F M D GL TY +I CK K+ A MLE M + G
Sbjct: 519 SKMELASGMFN-----EMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRP 573
Query: 282 DNLTLSSIIYGLLARGRLREAYKV----VEEIEKPDISLYHGLIKGLLRLRRAREATQVF 337
+ T + +I+GL + A ++ +EE PD+ Y +I GL A ++F
Sbjct: 574 NVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMF 633
Query: 338 REMIKRGCEPTMHTYIMLLQGHLGKRGR 365
+M+K GC P +HTY L+Q LG+ GR
Sbjct: 634 NKMVKHGCLPNLHTYSSLIQA-LGQEGR 660
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 116/254 (45%), Gaps = 6/254 (2%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQ-RKLVVEAKYLILK 168
T+ I + + + + +M GC+ +++ C+ K+ + +
Sbjct: 472 TYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEM 531
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
+ + PNE+ Y LI GYC L A+++ M G P++ + +I K N
Sbjct: 532 MDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNF 591
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
A ++ ++M +++ + TY VI+ +C G I A M +M K G + T SS
Sbjct: 592 SGAEELCKVMLEEKISP-DVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSS 650
Query: 289 IIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+I L GR+ EA ++ E++K PD Y +I+ + + A EMI G
Sbjct: 651 LIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAG 710
Query: 345 CEPTMHTYIMLLQG 358
C+PT+ TY +L++G
Sbjct: 711 CQPTLQTYDVLIKG 724
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 159/342 (46%), Gaps = 27/342 (7%)
Query: 90 IDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKV 149
+D+F + +MG T+ L+ L ++ +++ +H + G + +L + N V
Sbjct: 181 LDMFSQRGPKMGLF------TYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSV 234
Query: 150 VKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGF 208
+ LC+ V +A+ +I K+ +KP+ Y +I GYC DL A +I+N M +EG
Sbjct: 235 INALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGC 294
Query: 209 EPSIDVVDKMIETFFKINKDDEAMK-VFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQA 267
EP+ +I + +EA+ + +M R + + T IV +C G+I A
Sbjct: 295 EPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVA--LCDMGRIEDA 352
Query: 268 YTMLEEMFKRGIEADNLTLSSIIYGL-LARGRLREAYKVVEEIEKPDISLYHGLIKGLLR 326
+ + +M K+G + + T +S+I G ++R + +++ + P+ Y+ L+ L+
Sbjct: 353 WKIFIDMKKKGCKPNVYTYTSLISGQRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLME 412
Query: 327 LRRAREATQVFREMIKRGCEPTMHTYIMLLQGH--LGK------------RGRKGPDPLV 372
A VF M K GC P +Y L++G+ +G +GR P LV
Sbjct: 413 NMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPT-LV 471
Query: 373 NFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
++ I + G +G + A + +E + G + + Y + +
Sbjct: 472 TYN-IIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELI 512
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/385 (20%), Positives = 161/385 (41%), Gaps = 24/385 (6%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFF 131
N+ T++ +++ + S ++ + + EM R ++ TF ++ L ++ ++ F
Sbjct: 297 NAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIF 356
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDV 190
M GC+ ++ ++ +++ A L ++S + + PN + Y L+ +
Sbjct: 357 IDMKKKGCKPNVYTYTSLIS---GQRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMEN 413
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
++ A ++N+M G P+ +++I + I ++AM + M +K L T
Sbjct: 414 MEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNM-LKGRPTPTLVT 472
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y I+I C G A +LE M G + D + + +I G ++ A + E+
Sbjct: 473 YNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMM 532
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK 366
P+ Y LI G + + A ++ M + GC P + TY +L+ G +
Sbjct: 533 DRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFS 592
Query: 367 GPDPL-------------VNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
G + L V + T+ + GL G A + +++ G Y+
Sbjct: 593 GAEELCKVMLEEKISPDVVTYSTV-INGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSL 651
Query: 414 LHYYSNEEGVVMFEEVGKKLREVGL 438
+ E V EE+ +L++ GL
Sbjct: 652 IQALGQEGRVEEAEEMFSELKKQGL 676
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 84/175 (48%), Gaps = 7/175 (4%)
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM-KVFQMMRVK 241
+IK + ++ +A ++ + G + + ++ K+N M + Q++R
Sbjct: 164 MIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREG 223
Query: 242 RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
+L + Y VI+ +CK G + A +++ ++FK G++ D T +S+I G L
Sbjct: 224 LQPNLLI--YNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDS 281
Query: 302 AYKVV----EEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
A+++ EE +P+ + Y LI GL R EA EM + G PT+HT+
Sbjct: 282 AFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTF 336
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 124/307 (40%), Gaps = 33/307 (10%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHIM 134
++ ++ K ++L EM R L N+ T+ + + +L M
Sbjct: 507 SYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERM 566
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGDL 193
GC +++ N ++ L ++ A+ L + L E I P+ + Y +I G C+ G +
Sbjct: 567 KRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAI 626
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM--DDLGLSTY 251
A +++N M G P++ +I+ + + +EA ++F ++ + + D++ TY
Sbjct: 627 PLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEV---TY 683
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL---------LARGRLREA 302
+I+ GK+ +A+ L EM G + T +I GL +A
Sbjct: 684 VKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAAST 743
Query: 303 YKVVEEIEKPDI-----------------SLYHGLIKGLLRLRRAREATQVFREMIKRGC 345
++I D+ LY L+ L R R EA ++R M+ +
Sbjct: 744 STFDDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQ 803
Query: 346 EPTMHTY 352
P TY
Sbjct: 804 CPNQDTY 810
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/312 (19%), Positives = 135/312 (43%), Gaps = 42/312 (13%)
Query: 11 VCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCF 70
+C ++ +++ SP+ +S++ + +CNN + P+ L C
Sbjct: 597 LCKVMLEEKISPDVVTYSTVIN-----------GLCNNGAI---PLALEMFNKMVKHGCL 642
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVR-ELKKMVN 129
N T++ ++ +G+ ++ E E+ ++ L+ D+ + ++ + + ++ + +
Sbjct: 643 P-NLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFD 701
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-----------------------KYLI 166
F M + GC+ +L+ + ++K L Q ++V L
Sbjct: 702 FLGEMINAGCQPTLQTYDVLIKGL-QNEMVYHKLVALPNAASTSTFDDQIINKDVISVLS 760
Query: 167 LKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI 225
KL+E + + Y L+ G EA+ ++ M + P+ D + + +
Sbjct: 761 SKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRA 820
Query: 226 NKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
K D AM VF+ M +R + L L+ Y+ +I +C+ + +A + E+M R + AD +
Sbjct: 821 LKVDLAMDVFKHMSDQRCE-LHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIV 879
Query: 286 LSSIIYGLLARG 297
+ +I GLL G
Sbjct: 880 WTILINGLLGAG 891
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 138/290 (47%), Gaps = 7/290 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHI 133
+T+N +++ I K +D + L M N T I L ++
Sbjct: 230 VTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSD 289
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGD 192
M GC S+ N ++ LC++ L+ A ++ K+ PN ++Y L+ G+C
Sbjct: 290 MLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKK 349
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ A + ++M G P I + ++ K K D A+++ + K + L TY
Sbjct: 350 MDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPV-LITYN 408
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
VID + K GK +A +L+EM ++G++ D +T SS++ GL G++ EA K ++E
Sbjct: 409 TVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGL 468
Query: 311 --KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+P+ Y+ ++ GL + R+ A MI + C+PT TY +L++G
Sbjct: 469 GIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEG 518
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 165/359 (45%), Gaps = 24/359 (6%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
IT+N ++ KS ID LQ + R + D T+ L TL + +LK+ +
Sbjct: 128 ITYNVLISGYCKSGEID---NALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDR 184
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGD 192
C + +++ C+ V +A L+ ++ ++ KP+ + Y LI G C G
Sbjct: 185 QLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGR 244
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
L EA K N M G +P++ + ++ + + +A K+ M +++ + T+
Sbjct: 245 LDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDM-LRKGCSPSVVTFN 303
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK- 311
I+I+++C++G + +A +LE+M G ++L+ + +++G ++ A + ++ +
Sbjct: 304 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 363
Query: 312 ---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG---- 364
PDI Y+ L+ L + + A ++ ++ +GC P + TY ++ G L K G
Sbjct: 364 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDG-LSKVGKTER 422
Query: 365 ---------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
RKG P + + V GL + GK +A K+ + G+ YN +
Sbjct: 423 AIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIM 481
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 132/283 (46%), Gaps = 24/283 (8%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+ I Y LI GYC G++ A ++ + M P + + ++ T K +AM+V
Sbjct: 125 PDVITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEV 181
Query: 235 F--QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
Q+ + D + TY I+I+ CK + QA +L+EM +G + D +T + +I G
Sbjct: 182 LDRQLQKECYPDVI---TYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLING 238
Query: 293 LLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
+ GRL EA K + + +P++ ++ +++ + R +A ++ +M+++GC P+
Sbjct: 239 ICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPS 298
Query: 349 MHTYIMLL-----QGHLG-------KRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVE 396
+ T+ +L+ QG LG K G P + G K K A +Y++
Sbjct: 299 VVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLD 358
Query: 397 RVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLA 439
+++RG YN L + V + E+ +L G +
Sbjct: 359 IMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCS 401
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 114/244 (46%), Gaps = 24/244 (9%)
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM-RVKRMDDLGLS 249
G+L + K M G P I +I F +I K +A V +++ + + D +
Sbjct: 71 GELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD--VI 128
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE-E 308
TY ++I CK G+I A +L+ M + D +T ++I+ L G+L++A +V++ +
Sbjct: 129 TYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 185
Query: 309 IEK---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
++K PD+ Y LI+ + +A ++ EM +G +P + TY +L+ G + K GR
Sbjct: 186 LQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLING-ICKEGR 244
Query: 366 -------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNK 412
G P V I + + G+ +DA K + ++ +G +N
Sbjct: 245 LDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNI 304
Query: 413 FLHY 416
+++
Sbjct: 305 LINF 308
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 106/241 (43%), Gaps = 11/241 (4%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHI 133
+TFN +++ + + + + L++M N ++ L + +++ + + + I
Sbjct: 300 VTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDI 359
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGD 192
M GC + N ++ LC+ V A ++ +LS + P I Y +I G VG
Sbjct: 360 MVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGK 419
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS--- 249
A K+ + M +G +P I ++ + K DEA+K F ++ LG+
Sbjct: 420 TERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFH-----DLEGLGIRPNA 474
Query: 250 -TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY ++ +CK + +A L M + + T + +I G+ G +EA ++ E
Sbjct: 475 ITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNE 534
Query: 309 I 309
+
Sbjct: 535 L 535
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 3/209 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFF 131
NS+++N ++ K + +D E L M R D T+ L L + ++ V
Sbjct: 333 NSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEIL 392
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDV 190
+ ++ GC L N V+ L + A L+ ++ + +KP+ I Y L+ G
Sbjct: 393 NQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSRE 452
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G + EA K ++ + G P+ + ++ K + D A+ M KR +T
Sbjct: 453 GKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTE-AT 511
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGI 279
Y I+I+ + G +A +L E+ RG+
Sbjct: 512 YTILIEGIAYEGLAKEALDLLNELCSRGL 540
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 69/160 (43%), Gaps = 17/160 (10%)
Query: 293 LLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
L+ G L + +K +E + + PDI LI+G R+ + ++AT V + + G P
Sbjct: 67 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 126
Query: 349 MHTYIMLLQGHLGK-----------RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVER 397
+ TY +L+ G+ R PD +V ++TI L +GK A + ++R
Sbjct: 127 VITYNVLISGYCKSGEIDNALQVLDRMNVAPD-VVTYNTIL-RTLCDSGKLKQAMEVLDR 184
Query: 398 VMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVG 437
+ + Y + E GV ++ ++R G
Sbjct: 185 QLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKG 224
>gi|302809819|ref|XP_002986602.1| hypothetical protein SELMODRAFT_124189 [Selaginella moellendorffii]
gi|300145785|gb|EFJ12459.1| hypothetical protein SELMODRAFT_124189 [Selaginella moellendorffii]
Length = 445
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 137/292 (46%), Gaps = 7/292 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVNFF 131
NS+++N ++D + S I E LQ M +R + ++ A+ T L + L +
Sbjct: 82 NSVSYNTLIDALCSSGRIQEAREELQAMAKRGVAPNRVTYNAMATGLGKAGLLDEAFELM 141
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDV 190
+M G + N VV+ LC+ EA K + L I+PN + ++ +C
Sbjct: 142 GVMESAGFALTAVTFNPVVEFLCKSGRPDEACKVMETMLLRNIEPNILTLNLILHAFCKA 201
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
EA + ++M + GF P+I + ++E F ++ D A K+ + M + T
Sbjct: 202 ARPEEALGMTDIMVEMGFCPTIVTFNALLELFCNTDQMDSAAKLLETMAHSKCKP-NFVT 260
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK----VV 306
Y I++ + G++ +A LE++ G + L ++ + GL G + A + +
Sbjct: 261 YSIMVQKFAEMGRMVEARAFLEQLVVCGYAPNLLVCNAYVAGLCKTGEMDLASRFLTVMA 320
Query: 307 EEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
EE + + + Y+ L++G +L R EA +V EMI G P TY +L+QG
Sbjct: 321 EEGCRANTATYNSLVEGFCKLGRMDEAERVLEEMIAEGSLPDSTTYSVLIQG 372
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 128/279 (45%), Gaps = 9/279 (3%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMV 128
FA ++TFN +V+ + KS D + ++ M R + N T + L + ++ +
Sbjct: 149 FALTAVTFNPVVEFLCKSGRPDEACKVMETMLLRNIEPNILTLNLILHAFCKAARPEEAL 208
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGY 187
IM + G ++ N +++ C + A L+ ++ KPN + Y +++ +
Sbjct: 209 GMTDIMVEMGFCPTIVTFNALLELFCNTDQMDSAAKLLETMAHSKCKPNFVTYSIMVQKF 268
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
++G ++EA + G+ P++ V + + K + D A + +M +
Sbjct: 269 AEMGRMVEARAFLEQLVVCGYAPNLLVCNAYVAGLCKTGEMDLASRFLTVM-AEEGCRAN 327
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
+TY +++ CK G++ +A +LEEM G D+ T S +I GL + G++ A+ V+
Sbjct: 328 TATYNSLVEGFCKLGRMDEAERVLEEMIAEGSLPDSTTYSVLIQGLCSAGQIEHAFMVML 387
Query: 308 EI------EKPDISLYHGLIKGLLRLRRAREATQVFREM 340
++ +PD + + LI+ L L A V M
Sbjct: 388 QVTRAVESARPDPATFVKLIEKLCELGEMDRAALVLERM 426
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 123/290 (42%), Gaps = 25/290 (8%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDE 206
N ++K + V EAK + ++ KPN ++Y LI C G + EA + M
Sbjct: 55 NLMLKGFSEAGFVDEAKSHLHRMD--CKPNSVSYNTLIDALCSSGRIQEAREELQAMAKR 112
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS--TYRIVIDWMCKRGKI 264
G P+ + M K DEA F++M V L+ T+ V++++CK G+
Sbjct: 113 GVAPNRVTYNAMATGLGKAGLLDEA---FELMGVMESAGFALTAVTFNPVVEFLCKSGRP 169
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGL 320
+A ++E M R IE + LTL+ I++ R EA + + + + P I ++ L
Sbjct: 170 DEACKVMETMLLRNIEPNILTLNLILHAFCKAARPEEALGMTDIMVEMGFCPTIVTFNAL 229
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK-------------G 367
++ + A ++ M C+P TY +++Q + GR G
Sbjct: 230 LELFCNTDQMDSAAKLLETMAHSKCKPNFVTYSIMVQ-KFAEMGRMVEARAFLEQLVVCG 288
Query: 368 PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
P + +V GL K G+ A++++ + G YN + +
Sbjct: 289 YAPNLLVCNAYVAGLCKTGEMDLASRFLTVMAEEGCRANTATYNSLVEGF 338
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 96/196 (48%), Gaps = 11/196 (5%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVV--DKMIETFFKIN 226
L E++ +E YG L+ G+C G+ EA ++ D G P VV + M++ F +
Sbjct: 7 LGEFVH-SEFTYGTLVHGHCLAGEFDEAKRLVEEFKDTGMSPGSLVVLHNLMLKGFSEAG 65
Query: 227 KDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTL 286
DEA M K +Y +ID +C G+I +A L+ M KRG+ + +T
Sbjct: 66 FVDEAKSHLHRMDCKPNS----VSYNTLIDALCSSGRIQEAREELQAMAKRGVAPNRVTY 121
Query: 287 SSIIYGLLARGRLREAYKVVEEIEKPDISL----YHGLIKGLLRLRRAREATQVFREMIK 342
+++ GL G L EA++++ +E +L ++ +++ L + R EA +V M+
Sbjct: 122 NAMATGLGKAGLLDEAFELMGVMESAGFALTAVTFNPVVEFLCKSGRPDEACKVMETMLL 181
Query: 343 RGCEPTMHTYIMLLQG 358
R EP + T ++L
Sbjct: 182 RNIEPNILTLNLILHA 197
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 80/191 (41%), Gaps = 31/191 (16%)
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTL--SSIIYGLLARGRLREAYKVVE 307
TY ++ C G+ +A ++EE G+ +L + + ++ G G + EA +
Sbjct: 16 TYGTLVHGHCLAGEFDEAKRLVEEFKDTGMSPGSLVVLHNLMLKGFSEAGFVDEAKSHLH 75
Query: 308 EIE-KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK 366
++ KP+ Y+ LI L R +EA + + M KRG P TY + G LGK G
Sbjct: 76 RMDCKPNSVSYNTLIDALCSSGRIQEAREELQAMAKRGVAPNRVTYNAMATG-LGKAGLL 134
Query: 367 GP--------------------DPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
+P+V F L K+G+ +A K +E ++ R +E
Sbjct: 135 DEAFELMGVMESAGFALTAVTFNPVVEF-------LCKSGRPDEACKVMETMLLRNIEPN 187
Query: 407 RFDYNKFLHYY 417
N LH +
Sbjct: 188 ILTLNLILHAF 198
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 158/361 (43%), Gaps = 18/361 (4%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHI 133
+ F +++ ++ + DL Q+M R+++ D +F I + +L ++ F
Sbjct: 80 VDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGK 139
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWI-KPNEIAYGWLIKGYCDVGD 192
+ G + ++ LC V EA ++ E +PN + + L+ G C G
Sbjct: 140 ITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGR 199
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
++EA + + M ++G +P+ +++ K A+ + + M + Y
Sbjct: 200 IVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYS 259
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK- 311
+ID +CK G+ S A + EM ++GI D T +S+I G + GR +A ++++E+ +
Sbjct: 260 AIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER 319
Query: 312 ---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR----- 363
PD+ Y+ LI ++ + EA +++ EM+ RG P TY ++ G +
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAA 379
Query: 364 -------GRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHY 416
KG P V T + G A + D + + + RG+ YN +H
Sbjct: 380 EDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHG 439
Query: 417 Y 417
+
Sbjct: 440 F 440
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 134/300 (44%), Gaps = 16/300 (5%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHI 133
+T+N +++ K E EM R ++ N T+ + + L + F++
Sbjct: 326 VTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYL 385
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M GC + ++ C K + + L+ ++ + N + Y LI G+C VGD
Sbjct: 386 MATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGD 445
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD-------- 244
L A + M G P I + +++ K +A+++F+ M+ +MD
Sbjct: 446 LNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFN 505
Query: 245 --DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
+ + TY I+I + GK +A + EEM RGI D +T SS+I GL + RL EA
Sbjct: 506 GVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 303 YKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
++ + P++ ++ LI G + R + ++F EM +RG YI L+ G
Sbjct: 566 TQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYG 625
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 112/261 (42%), Gaps = 15/261 (5%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAE 120
Y + C + + TF ++D ++ ID E L EM RR LV N T+ +
Sbjct: 384 YLMATKGC-SPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCL 442
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE--------- 171
V +L ++ M G + N ++ LC + +A + + +
Sbjct: 443 VGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASH 502
Query: 172 ---WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++P+ + Y LI G + G +EA +++ M G P MI+ K ++
Sbjct: 503 PFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 562
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
DEA ++F M K + T+ +I+ CK G++ + EM +RGI AD + +
Sbjct: 563 DEATQMFVSMGSKSFSP-NVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYIT 621
Query: 289 IIYGLLARGRLREAYKVVEEI 309
+IYG G + A + +E+
Sbjct: 622 LIYGFRKVGNINGALDIFQEM 642
>gi|15237375|ref|NP_199422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171880|sp|Q9FNL2.1|PP418_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g46100
gi|9757730|dbj|BAB08255.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332007954|gb|AED95337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 472
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 119/252 (47%), Gaps = 7/252 (2%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA--KY 164
+ K + L L E +L F+ M + G ++ LN ++K LC+ V+A K
Sbjct: 120 SQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKI 179
Query: 165 LILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFK 224
+ P+ YG LI G C G + EA K++ M ++ P++ +I
Sbjct: 180 FLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCG 239
Query: 225 INKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNL 284
DEAM+ + M+ K ++ + TY ++D +CK G+ QA + E M RG + +
Sbjct: 240 SKNVDEAMRYLEEMKSKGIEP-NVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMV 298
Query: 285 TLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREM 340
T +++I GL +++EA ++++ + KPD LY +I G + + REA EM
Sbjct: 299 TYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEM 358
Query: 341 IKRGCEPTMHTY 352
I G P T+
Sbjct: 359 ILGGITPNRLTW 370
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 128/282 (45%), Gaps = 31/282 (10%)
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
+ +GY V ++ ++++ M D +PS ++ + N+ + A K ++ MR
Sbjct: 92 ICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMR--- 148
Query: 243 MDDLGL----STYRIVIDWMCKR-GKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
++GL ++ ++I +C+ G + + EM KRG + D+ T ++I GL G
Sbjct: 149 --EIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFG 206
Query: 298 RLREAYKVVEE-IEK---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYI 353
R+ EA K+ E +EK P + Y LI GL + EA + EM +G EP + TY
Sbjct: 207 RIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYS 266
Query: 354 MLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMN 400
L+ G L K GR +G P + T + GL K K +A + ++R+
Sbjct: 267 SLMDG-LCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNL 325
Query: 401 RGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLA 442
+G++ Y K + + + F E L E+ L +
Sbjct: 326 QGLKPDAGLYGKVISGFC---AISKFREAANFLDEMILGGIT 364
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 121/274 (44%), Gaps = 26/274 (9%)
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD-DLGLST 250
DLI KI N + E D++ + + ++++ ++++VF M K D D
Sbjct: 72 DLIVRMKIENCVVSE------DILLSICRGYGRVHRPFDSLRVFHKM--KDFDCDPSQKA 123
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR-GRLREAYKVVEEI 309
Y V+ + + +++ A+ + M + G+ +L+ +I L G + K+ E+
Sbjct: 124 YVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEM 183
Query: 310 EK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG- 364
K PD Y LI GL R R EA ++F EM+++ C PT+ TY L+ G G +
Sbjct: 184 PKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNV 243
Query: 365 -----------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
KG +P V + + GL K G+SL A + E +M RG Y
Sbjct: 244 DEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTL 303
Query: 414 LHYYSNEEGVVMFEEVGKKLREVGLADLADIFQR 447
+ E+ + E+ ++ GL A ++ +
Sbjct: 304 ITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGK 337
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 125/285 (43%), Gaps = 18/285 (6%)
Query: 89 NIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLN 147
+D + EM +R D T+ + L + + F M + C ++
Sbjct: 172 TVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYT 231
Query: 148 KVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDE 206
++ LC K V EA +YL S+ I+PN Y L+ G C G ++A +++ +M
Sbjct: 232 SLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMAR 291
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD-DLGLSTYRIVIDWMCKRGKIS 265
G P++ +I K K EA+++ M ++ + D GL Y VI C K
Sbjct: 292 GCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGL--YGKVISGFCAISKFR 349
Query: 266 QAYTMLEEMFKRGIEADNLTLS-------SIIYGLLARGRLREAYKVVEEIEKPDISL-- 316
+A L+EM GI + LT + ++ GL A R A+ + + IS+
Sbjct: 350 EAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSR-AFTLYLSMRSRGISVEV 408
Query: 317 --YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
L+K L + ++A Q+ E++ GC P+ T+ +L+ GH
Sbjct: 409 ETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI-GH 452
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 114/248 (45%), Gaps = 15/248 (6%)
Query: 73 NSITFNRMVDIIGKSRNID----LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMV 128
+S T+ ++ + + ID LF E +++ +V T+ + L + + + +
Sbjct: 191 DSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVV---TYTSLINGLCGSKNVDEAM 247
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGY 187
+ M G E ++ + ++ LC+ ++A L + ++ +PN + Y LI G
Sbjct: 248 RYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGL 307
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD--- 244
C + EA ++ + M +G +P + K+I F I+K EA M + +
Sbjct: 308 CKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNR 367
Query: 245 ---DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
++ + T V+ +C S+A+T+ M RGI + TL S++ L +G ++
Sbjct: 368 LTWNIHVKTSNEVVRGLCANYP-SRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQK 426
Query: 302 AYKVVEEI 309
A ++V+EI
Sbjct: 427 AVQLVDEI 434
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 136/290 (46%), Gaps = 7/290 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHI 133
+T+N +++ I K +D L M N T I L ++ F
Sbjct: 283 VTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAE 342
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M GC S+ N ++ LC++ L+ A ++ K+ + PN ++Y L+ C
Sbjct: 343 MIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKK 402
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ A + ++M G P I + ++ K K D A+++ + K + L TY
Sbjct: 403 MERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPV-LITYN 461
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
VID + K GK A +L+EM +G++ D +T S+++ GL G++ EA ++E
Sbjct: 462 TVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEM 521
Query: 311 --KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
KP+ Y+ ++ GL + R+ A M+ RGC+PT +Y++L++G
Sbjct: 522 GVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEG 571
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 164/359 (45%), Gaps = 24/359 (6%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
IT+N ++ K+ I LQ + R + D T+ L TL + +LK+ +
Sbjct: 181 ITYNVLISGYCKTGEIG---SALQLLDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDR 237
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
C + +++ C+ V +A L+ ++ + KP+ + Y LI G C G
Sbjct: 238 QMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGR 297
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
L EA + N M G +P++ + ++ + + +A K M +++ + T+
Sbjct: 298 LDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEM-IRKGCSPSVVTFN 356
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK- 311
I+I+++C++G I +A +LE+M + G ++L+ + +++ L ++ A + ++ +
Sbjct: 357 ILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSR 416
Query: 312 ---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR--- 365
PDI Y+ L+ L + + A ++ ++ +GC P + TY ++ G L K G+
Sbjct: 417 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDG-LSKVGKTDD 475
Query: 366 ----------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
KG P + + VGGL + GK +A + + GV+ YN +
Sbjct: 476 AIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIM 534
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 133/283 (46%), Gaps = 24/283 (8%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+ I Y LI GYC G++ A ++ + M+ P + + ++ T K EAM+V
Sbjct: 178 PDVITYNVLISGYCKTGEIGSALQLLDRMS---VSPDVVTYNTILRTLCDSGKLKEAMEV 234
Query: 235 F--QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
QM R D + TY I+I+ CK + QA +L+EM +G + D +T + +I G
Sbjct: 235 LDRQMQRECYPDVI---TYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLING 291
Query: 293 LLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
+ GRL EA + + + +P++ ++ +++ + R +A + EMI++GC P+
Sbjct: 292 ICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPS 351
Query: 349 MHTYIMLL-----QGHLG-------KRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVE 396
+ T+ +L+ +G +G K + G P + L K K A +Y++
Sbjct: 352 VVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLD 411
Query: 397 RVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLA 439
+++RG YN L + V + E+ +L G +
Sbjct: 412 IMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCS 454
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 114/257 (44%), Gaps = 20/257 (7%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+ IA LI+G C G +A+++ ++ D G P + + +I + K + A+++
Sbjct: 143 PDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQL 202
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
M V + TY ++ +C GK+ +A +L+ +R D +T + +I
Sbjct: 203 LDRMSVSP----DVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATC 258
Query: 295 ARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
+ +A K+++E+ KPD+ Y+ LI G+ + R EA + M GC+P +
Sbjct: 259 KESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVI 318
Query: 351 TYIMLLQG------------HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERV 398
T+ ++L+ L + RKG P V I + L + G A +E++
Sbjct: 319 THNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKM 378
Query: 399 MNRGVEVPRFDYNKFLH 415
G YN LH
Sbjct: 379 PQHGCTPNSLSYNPLLH 395
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 152/365 (41%), Gaps = 61/365 (16%)
Query: 126 KMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIK 185
K I+ D G + N ++ C+ + A L+ ++S + P+ + Y +++
Sbjct: 163 KATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRMS--VSPDVVTYNTILR 220
Query: 186 GYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK---- 241
CD G L EA ++ + P + +IE K + +AMK+ MR K
Sbjct: 221 TLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKP 280
Query: 242 ----------------RMDDL--------------GLSTYRIVIDWMCKRGKISQAYTML 271
R+D+ + T+ I++ MC G+ A L
Sbjct: 281 DVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFL 340
Query: 272 EEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRL 327
EM ++G +T + +I L +G + A V+E++ + P+ Y+ L+ L +
Sbjct: 341 AEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKD 400
Query: 328 RRAREATQVFREMIKRGCEPTMHTYIMLLQGH------------LGKRGRKGPDP-LVNF 374
++ A + M+ RGC P + TY LL L + G KG P L+ +
Sbjct: 401 KKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITY 460
Query: 375 DTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE----EGVVMF---E 427
+T+ + GL K GK+ DA K ++ + +G++ Y+ + S E E + F E
Sbjct: 461 NTV-IDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLE 519
Query: 428 EVGKK 432
E+G K
Sbjct: 520 EMGVK 524
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 116/241 (48%), Gaps = 8/241 (3%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILK 168
TF I + L + + ++ M GC + N ++ LC+ K + A +YL +
Sbjct: 354 TFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIM 413
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
+S P+ + Y L+ C G + A +I N + +G P + + +I+ K+ K
Sbjct: 414 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKT 473
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
D+A+K+ M+ K + + TY ++ + + GK+ +A ++ + G++ + +T +S
Sbjct: 474 DDAIKLLDEMKGKGLKP-DIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNS 532
Query: 289 IIYGLL-ARGRLRE----AYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
I+ GL AR +R AY V KP + Y LI+GL A+EA ++ E+ R
Sbjct: 533 IMLGLCKARQTVRAIDFLAYMVARGC-KPTETSYMILIEGLAYEGLAKEALELLNELCSR 591
Query: 344 G 344
G
Sbjct: 592 G 592
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 115/247 (46%), Gaps = 30/247 (12%)
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG--- 247
G+L E K M G P I +I K K +A +V ++ ++D G
Sbjct: 124 GELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEI-----LEDSGAVP 178
Query: 248 -LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
+ TY ++I CK G+I A +L+ M + D +T ++I+ L G+L+EA +V+
Sbjct: 179 DVITYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKEAMEVL 235
Query: 307 E-EIEK---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
+ ++++ PD+ Y LI+ + +A ++ EM +GC+P + TY +L+ G + K
Sbjct: 236 DRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLING-ICK 294
Query: 363 RGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFD 409
GR G P V I + + G+ +DA K++ ++ +G
Sbjct: 295 EGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVT 354
Query: 410 YNKFLHY 416
+N +++
Sbjct: 355 FNILINF 361
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 111/241 (46%), Gaps = 11/241 (4%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHI 133
+TFN +++ + + I + L++M + N ++ L L + +++++ + + I
Sbjct: 353 VTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDI 412
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGD 192
M GC + N ++ LC+ V A ++ +L S+ P I Y +I G VG
Sbjct: 413 MVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGK 472
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS--- 249
+A K+ + M +G +P I ++ + K DEA+ F ++++G+
Sbjct: 473 TDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFH-----DLEEMGVKPNA 527
Query: 250 -TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY ++ +CK + +A L M RG + + +I GL G +EA +++ E
Sbjct: 528 ITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNE 587
Query: 309 I 309
+
Sbjct: 588 L 588
>gi|449444614|ref|XP_004140069.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
gi|449528063|ref|XP_004171026.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
Length = 536
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 158/350 (45%), Gaps = 39/350 (11%)
Query: 21 SPESRLHSSLSSCNFNLTHEFF------LQICNNFPLSWRPVYLFFQYTQKAQPCFAHNS 74
S ES L S + SC+ + + F ++C++ P + ++ F + +K F + S
Sbjct: 133 SAESILRSIIESCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAHLKK----FRNAS 188
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGR--RRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
TF RM D F T++ L+N IAL E+R + N +
Sbjct: 189 DTFCRMKDYG--------FLPTVESCNAYLSSLLNFSRGDIALAFYREMRRSRIYPNSY- 239
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVG 191
LN V+ C+ + +A + ++ PN +Y LI GYC+ G
Sbjct: 240 ------------TLNLVICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTLIAGYCNKG 287
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTY 251
L A K+ ++M G P + + ++ F K+ K EA K+F M+ + + TY
Sbjct: 288 LLSSAMKLRSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMSLSPTTV-TY 346
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK 311
I+I+ K G + EEM + ++AD LT +++I GL G+ ++A +V E+++
Sbjct: 347 NILINGYSKAGNCEMGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVRELDE 406
Query: 312 ----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
P+ S + LI G +++ A Q+++ MIK P T+ MLL
Sbjct: 407 KGLVPNASTFSALIYGQCVQKQSERAFQIYKSMIKSSFTPCDQTFRMLLS 456
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 113/243 (46%), Gaps = 18/243 (7%)
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
+ L K + + AS + M D GF P+++ + + + ++ D A+ ++ MR
Sbjct: 171 FDLLFKTFAHLKKFRNASDTFCRMKDYGFLPTVESCNAYLSSLLNFSRGDIALAFYREMR 230
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
R+ T +VI CK G++ +A + EEM G + + +++I G +G L
Sbjct: 231 RSRIYPNSY-TLNLVICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTLIAGYCNKGLL 289
Query: 300 REAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
A K+ +EK PD+ ++ L+ G ++ + +EA+++F EM PT TY +L
Sbjct: 290 SSAMKLRSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMSLSPTTVTYNIL 349
Query: 356 LQGHLG----KRGRKGPDPLVNFD--------TIFVGGLVKAGKSLDAAKYVERVMNRGV 403
+ G+ + G + + + F + GL K GK+ AA V + +G+
Sbjct: 350 INGYSKAGNCEMGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVRELDEKGL 409
Query: 404 EVP 406
VP
Sbjct: 410 -VP 411
Score = 45.1 bits (105), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 61/138 (44%), Gaps = 1/138 (0%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
+K + + Y LI G C G +A+ + + ++G P+ +I + + A
Sbjct: 374 VKADILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSALIYGQCVQKQSERAF 433
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
++++ M +K T+R+++ C+ A +LEEM R D L + G
Sbjct: 434 QIYKSM-IKSSFTPCDQTFRMLLSTFCENEDYDGAVQLLEEMLNRHKAPDVNNLYELCAG 492
Query: 293 LLARGRLREAYKVVEEIE 310
L G+++ A + E+E
Sbjct: 493 LGQCGKVKTAMMLCSELE 510
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 160/353 (45%), Gaps = 23/353 (6%)
Query: 71 AHNSITFNRMVDIIGKSRNID---LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKM 127
A + IT+ +VD + KS I L E + E G N T+ + ++ + +
Sbjct: 99 APSVITYTILVDALCKSARISDASLILEDMIEAGCAP--NVVTYNTLINGFCKLGNMDEA 156
Query: 128 VNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKG 186
V F+ M + C + N ++ C+++ + L+ ++ ++ +PN I Y L+
Sbjct: 157 VVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDS 216
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
G I+A + +M +PS + MI+ F K+ + D A ++FQ+M R
Sbjct: 217 LVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLM-TDRGCLP 275
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
+ TY I+I C+ +I A +LE M + G D +T +SI+ GL ++ EAY+V
Sbjct: 276 DIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVY 335
Query: 307 EEIEKP----DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG---- 358
E + D+ LI GL + RR +A ++ REM + G P + Y +L+ G
Sbjct: 336 EVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKA 395
Query: 359 --------HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
+ KG P V +I + L K+ + D ++ ++ RGV
Sbjct: 396 DQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 127/282 (45%), Gaps = 40/282 (14%)
Query: 156 RKLVVEAKYLILK--LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSID 213
RK + Y + K L P+ I Y LI G+C D +A ++ + M G P
Sbjct: 10 RKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNA 69
Query: 214 VVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEE 273
V + +I+ + D A+ ++ M +R + TY I++D +CK +IS A +LE+
Sbjct: 70 VYNTIIKGLCDNGRVDSALVHYRDM--QRHCAPSVITYTILVDALCKSARISDASLILED 127
Query: 274 MFKRGIEADNLTLSSIIYGLLARGRLREAY----KVVEEIEKPDISLYHGLIKGLLRLRR 329
M + G + +T +++I G G + EA +++E PD+ Y+ LI G + R
Sbjct: 128 MIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQER 187
Query: 330 AREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSL 389
++ ++ +EM+K GCEP TY L+ LVK+GK +
Sbjct: 188 PQDGAKLLQEMVKYGCEPNFITYNTLMD-----------------------SLVKSGKYI 224
Query: 390 DAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGK 431
DA + ++ R + F +N + MF +VG+
Sbjct: 225 DAFNLAQMMLRRDCKPSHFTFNLMID---------MFCKVGQ 257
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 139/292 (47%), Gaps = 8/292 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
+SIT++ +++ K+R+ + L EM +R +V ++ + + L + + + +
Sbjct: 32 DSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHY 91
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDV 190
M C S+ +V LC+ + +A ++ + E PN + Y LI G+C +
Sbjct: 92 RDMQR-HCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKL 150
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G++ EA ++N M + P + + +I+ + K + + K+ Q M VK + T
Sbjct: 151 GNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEM-VKYGCEPNFIT 209
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y ++D + K GK A+ + + M +R + + T + +I G+L AY++ + +
Sbjct: 210 YNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMT 269
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
PDI Y+ +I G R R +A Q+ M + GC P + TY ++ G
Sbjct: 270 DRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSG 321
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 94/214 (43%), Gaps = 20/214 (9%)
Query: 218 MIETFFKINKDDEAMKVFQ--MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMF 275
++ F + K EA +F+ + + D + TY +I+ CK QAY +L+EM
Sbjct: 4 LLSAFVRKKKAQEAYDLFKNHLCGLCSPDSI---TYSTLINGFCKARDFQQAYRLLDEME 60
Query: 276 KRGIEADNLTLSSIIYGLLARGRLREA---YKVVEEIEKPDISLYHGLIKGLLRLRRARE 332
KRGI N ++II GL GR+ A Y+ ++ P + Y L+ L + R +
Sbjct: 61 KRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRHCAPSVITYTILVDALCKSARISD 120
Query: 333 ATQVFREMIKRGCEPTMHTYIMLLQG--HLGKRG----------RKGPDPLVNFDTIFVG 380
A+ + +MI+ GC P + TY L+ G LG P V I +
Sbjct: 121 ASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILID 180
Query: 381 GLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
G K + D AK ++ ++ G E YN +
Sbjct: 181 GYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLM 214
>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 145/276 (52%), Gaps = 7/276 (2%)
Query: 90 IDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNK 148
ID+ E EM R D+ T+ + L + + ++ M+ M++ G + + N
Sbjct: 782 IDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNT 841
Query: 149 VVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEG 207
++ L + K++ EA L +L SE P YG L+ G G++ +A +++ M + G
Sbjct: 842 IISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECG 901
Query: 208 FEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQA 267
EP+ + + ++ + ++ ++F+ M + M+ + +Y +VID +C G+++
Sbjct: 902 CEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNP-DIKSYTVVIDTLCADGRLNDG 960
Query: 268 YTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKG 323
+ +++ G+E D +T + +I+GL GRL EA + ++EK P++ Y+ LI
Sbjct: 961 LSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILY 1020
Query: 324 LLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
L + +A EA +++ E++ +G +P + TY L++G+
Sbjct: 1021 LGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGY 1056
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 144/325 (44%), Gaps = 45/325 (13%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIM 134
T++ ++ GK R+ + L EM R + N ++ I + L + L++ M
Sbjct: 208 TYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKM 267
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDL 193
+ GC+ + +++ LC + +AK + K+ + KP+ + Y L+ D GD
Sbjct: 268 EEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDS 327
Query: 194 IEASKIWNLMTDEGF--------------------EPSIDVVDKM--------------- 218
S+IWN + +G+ + ++DV D+M
Sbjct: 328 RSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSL 387
Query: 219 IETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRG 278
I F K ++ + A+++F M + G T+ + I++ K G+ +A E M +G
Sbjct: 388 ISGFLKADRFNRALELFNHMNIHGPTPNGY-THVLFINYHGKSGESLKALKRYELMKSKG 446
Query: 279 IEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREAT 334
I D + ++++YGL GRL A +V E++ PD Y +IK + A EA
Sbjct: 447 IVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAM 506
Query: 335 QVFREMIKRGCEP---TMHTYIMLL 356
++F EMI+ C P M++ I +L
Sbjct: 507 KIFAEMIENRCAPDVLAMNSLIDML 531
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 137/318 (43%), Gaps = 56/318 (17%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
I P+ I Y +IK + EA KI+ M + P + ++ +I+ +K + +EA
Sbjct: 482 ISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAW 541
Query: 233 KVFQMMR-----------------------VKRMDDL-----------GLSTYRIVIDWM 258
K+F ++ VK + L + TY V+D +
Sbjct: 542 KIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCL 601
Query: 259 CKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK---PDIS 315
CK G+++ A ML M G D + ++++YGL+ RL EA+ + +++K PD +
Sbjct: 602 CKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEDRLDEAFWMFCQMKKVLAPDYA 661
Query: 316 LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYI-MLLQGHLGKRGRKGPDPLVNF 374
++ +R +EA RE I + + + L++G L R G + + F
Sbjct: 662 TVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGIL---KRDGTEKSIEF 718
Query: 375 -----------DTIFVGGLV----KAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN 419
D +F+ ++ K ++L A + V++ N GV + YN + +
Sbjct: 719 AENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVD 778
Query: 420 EEGVVMFEEVGKKLREVG 437
E+ + + EE+ +++ +G
Sbjct: 779 EDLIDIAEELFSEMKRLG 796
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 89/474 (18%), Positives = 176/474 (37%), Gaps = 101/474 (21%)
Query: 52 SWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKT 110
+W+ Y + + C T+N ++ +G+ + + L+ M N T
Sbjct: 540 AWKIFYELKEMNLEPTDC------TYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIIT 593
Query: 111 FKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS 170
+ L L + E+ ++ + M GC L N V+ L + + EA ++ ++
Sbjct: 594 YNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEDRLDEAFWMFCQMK 653
Query: 171 EWIKPNEIAYGWLIKGYCDVGDLIEA-----------------SKIWNLMTD----EGFE 209
+ + P+ ++ + G + EA S + +LM +G E
Sbjct: 654 KVLAPDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTE 713
Query: 210 PSIDVVDKMIETFFKIN------------KDDEAMKVFQMMRVKRMDDLGLS----TYRI 253
SI+ + + + ++ K EA+ ++ VK+ ++LG+S +Y
Sbjct: 714 KSIEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHEL--VKKFENLGVSLKTGSYNA 771
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE--- 310
+I + I A + EM + G + D T I+ + R+ + K+ EE+
Sbjct: 772 LICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKG 831
Query: 311 -KPDISLYHGLIKGLLRLRRAREATQ---------------------------------- 335
K Y+ +I GL++ + EA
Sbjct: 832 YKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAE 891
Query: 336 -VFREMIKRGCEPTMHTYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGL 382
+F EM++ GCEP Y +LL G+ +G +P + T+ + L
Sbjct: 892 ALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTL 951
Query: 383 VKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN----EEGVVMFEEVGKK 432
G+ D Y +++ + G+E YN +H EE + ++ ++ KK
Sbjct: 952 CADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKK 1005
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 114/286 (39%), Gaps = 40/286 (13%)
Query: 75 ITFNRMVDIIGKSRNID----LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNF 130
+T+N ++ + KS+ +D L+++ + E T+ L L + ++
Sbjct: 837 VTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPC---TYGPLLDGLLKDGNIEDAEAL 893
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCD 189
F M +CGCE + + N ++ + L + E + P+ +Y +I C
Sbjct: 894 FDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCA 953
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
G L + + +TD G EP + + +I K + +EA+ ++ M K + L
Sbjct: 954 DGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAP-NLY 1012
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
TY +I ++ K GK ++A M EE+ +G
Sbjct: 1013 TYNSLILYLGKAGKAAEAGKMYEELLAKGW------------------------------ 1042
Query: 310 EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
KP++ Y+ LI+G A + MI GC P TY+ L
Sbjct: 1043 -KPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQL 1087
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 114/273 (41%), Gaps = 32/273 (11%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
++PN +Y I+ G L EA +I M +EG +P + +I+ + +A
Sbjct: 237 VRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAK 296
Query: 233 KVFQMMRV--KRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
VF M+ ++ D + TY ++D G + + G + ++ ++ +
Sbjct: 297 DVFWKMKASDQKPDRV---TYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAV 353
Query: 291 YGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
L GR+ EA V +E+++ P Y+ LI G L+ R A ++F M G
Sbjct: 354 DALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPT 413
Query: 347 PTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
P +T+++ + H K+G+SL A K E + ++G+
Sbjct: 414 PNGYTHVLFINYH-----------------------GKSGESLKALKRYELMKSKGIVPD 450
Query: 407 RFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLA 439
N L+ + + M + V +L+ +G++
Sbjct: 451 VVAGNAVLYGLAKTGRLGMAKRVFHELKAMGIS 483
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 99/224 (44%), Gaps = 35/224 (15%)
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPD 313
+++ M G++ + + M ++ I+A+ T ++ + G LR A + +++
Sbjct: 107 MLELMRAHGRVGDVAQVFDLMQRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAG 166
Query: 314 ISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL------------Q 357
I L Y+GLI L++ REA V++ M G PT+ TY +L+
Sbjct: 167 IVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVV 226
Query: 358 GHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
G LG+ +G P V TI + L +AG+ +A + + ++ G + P N L
Sbjct: 227 GLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCK-PDVVTNTVL--- 282
Query: 418 SNEEGVVMFEEVGKKLREVGLADLADIFQRYGKKMATRERRRNR 461
+ + + G+ LAD D+F KM +++ +R
Sbjct: 283 -----IQILCDAGR------LADAKDVFW----KMKASDQKPDR 311
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 166/350 (47%), Gaps = 27/350 (7%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+ + ++D + K R + + +M + + D T+ + L + E K + +
Sbjct: 206 VIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQ 265
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGD 192
M + + + + VV LC+ V EA ++ + + ++P+ + Y L+ G+C +
Sbjct: 266 MVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSE 325
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLSTY 251
+ EA K++++M +GF P + +I + KI+K D+AM +F +M R + + D TY
Sbjct: 326 MDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPD--TKTY 383
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE- 310
++ +C G++ A + EM RG D +T S ++ L L EA +++ IE
Sbjct: 384 NTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEA 443
Query: 311 ---KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG--- 364
PDI +Y+ +I G+ R A +F + +G P++ TY +++ G L KRG
Sbjct: 444 SNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHG-LCKRGLLN 502
Query: 365 ------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
PD ++TI G ++ ++L A + +E ++ RG
Sbjct: 503 EANKLFMEMDGNDCSPDG-CTYNTI-ARGFLQNNETLRAIQLLEEMLARG 550
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/401 (23%), Positives = 175/401 (43%), Gaps = 44/401 (10%)
Query: 55 PVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIA 114
P FF +Q F S+ FN + D + + L M + D F
Sbjct: 24 PPLPFFSSSQNN---FHSKSLHFNTLDDALSS-------FNRLLHMHPPPSIVD--FAKL 71
Query: 115 LMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLV-----VEAKYLILKL 169
L ++A+++ +++ M+ G ++ LN ++ + C V V AK ILKL
Sbjct: 72 LTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAK--ILKL 129
Query: 170 SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD 229
+P+ + LI+G C G + EA +++ M DEGF+P++ +I K+
Sbjct: 130 GH--QPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTS 187
Query: 230 EAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSI 289
A+++ + M + Y +ID +CK ++++A+ + +M +GI D T +S+
Sbjct: 188 AAIRLLRSMEQGNCQP-DVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSL 246
Query: 290 IYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGC 345
++ L + ++ ++ PD+ ++ ++ L + + EA ++ MI+RG
Sbjct: 247 VHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGV 306
Query: 346 EPTMHTYIMLLQGHLGKRG------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAK 393
EP + TY L+ GH + RKG P V T + G K K +D A
Sbjct: 307 EPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHK-IDKAM 365
Query: 394 YVERVMNRGVEVPRF-DYNKFL----HYYSNEEGVVMFEEV 429
Y+ M R +P YN + H ++ + +F E+
Sbjct: 366 YLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEM 406
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 145/326 (44%), Gaps = 18/326 (5%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
N T+ + L +V + M C+ + + ++ +LC+ + V EA L
Sbjct: 169 NVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLF 228
Query: 167 LKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI 225
++ + I P+ Y L+ C++ + + + N M + P + + +++ K
Sbjct: 229 SQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKE 288
Query: 226 NKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
K EA ++ MM ++R + + TY ++D C + ++ +A + + M ++G D ++
Sbjct: 289 GKVTEAHEIVDMM-IQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVIS 347
Query: 286 LSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMI 341
+++I G ++ +A + EE+ + PD Y+ L+ GL + R ++A +F EM+
Sbjct: 348 YTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMV 407
Query: 342 KRGCEPTMHTYIMLLQGHLGKRG------------RKGPDPLVNFDTIFVGGLVKAGKSL 389
RG P + TY +LL R +P + I + G+ +AG+
Sbjct: 408 ARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELE 467
Query: 390 DAAKYVERVMNRGVEVPRFDYNKFLH 415
A + ++G+ + YN +H
Sbjct: 468 AARDLFSNLSSKGLHPSVWTYNIMIH 493
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 100/219 (45%), Gaps = 3/219 (1%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMV 128
FA + I++ +++ K ID +EM R+ + D KT+ + L V L+ +
Sbjct: 341 FAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAI 400
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGY 187
FH M G L + ++ +LC+ + + EA L+ + + + P+ Y +I G
Sbjct: 401 ALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGM 460
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C G+L A +++ ++ +G PS+ + MI K +EA K+F M G
Sbjct: 461 CRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDG 520
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTL 286
TY + + + +A +LEEM RG AD+ L
Sbjct: 521 -CTYNTIARGFLQNNETLRAIQLLEEMLARGFSADSCFL 558
>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
Length = 545
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 172/383 (44%), Gaps = 29/383 (7%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVNFFHI 133
+T+N +D + K+ +D ++ L++M ++ + AL+ L + L + +
Sbjct: 43 VTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQ 102
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGD 192
M + G +L+ V+ L + V EA+ + + L +P+ Y LIKG C G
Sbjct: 103 MVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGK 162
Query: 193 LIEASKIWNLMTDEGFE----PSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
EA ++ P + +I+ K + EA +VF V+R
Sbjct: 163 PEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDA 222
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY +ID +CK G++ + EM RG E D +T +++I G + + +A++V +
Sbjct: 223 VTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQ 282
Query: 309 IEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
+ + + Y+ ++ GL + R EA F M +RGC T+ TY L+ G +
Sbjct: 283 MLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGN 342
Query: 365 ------------RKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
+G +P LV+++ I + GL +AGK A Y E+++ R + + +N
Sbjct: 343 VSAAVELFRRMLDRGCEPNLVSYN-IIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFN 401
Query: 412 KFLHYYSN-----EEGVVMFEEV 429
FLH +GV +FE +
Sbjct: 402 AFLHGLCQRLDTVSDGVELFESM 424
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 150/352 (42%), Gaps = 27/352 (7%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
F + + L + L + + GCE N + LC+ + V +A L+ K+
Sbjct: 9 AFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKM 68
Query: 170 SE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
E P + Y L+ G G L EA + M ++G P++ +I+ K +
Sbjct: 69 DEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRV 128
Query: 229 DEAMKVFQMMRVK--RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEA----D 282
+EA ++F M R D Y +I +CK GK +AY + +E R A D
Sbjct: 129 EEARRIFVDMLGNGCRPDAF---VYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPD 185
Query: 283 NLTLSSIIYGLLARGRLREAYKVV--EEIEK---PDISLYHGLIKGLLRLRRAREATQVF 337
+T +S+I GL GR+ EA +V E +E+ PD Y +I GL +L R E + F
Sbjct: 186 VVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERF 245
Query: 338 REMIKRGCEPTMHTYIMLLQG----------HLGKRGRKGPDPLVNFDT--IFVGGLVKA 385
EM RG EP TY L+ G H R +V+ T I + GL KA
Sbjct: 246 HEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKA 305
Query: 386 GKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVG 437
G+ +A + RG Y+ + + +E V E+ +++ + G
Sbjct: 306 GRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRG 357
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 138/289 (47%), Gaps = 20/289 (6%)
Query: 147 NKVVKTLCQRKLVVEAKYLI--LKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
++ LC+ ++EA+ + + P+ + Y +I G C +G + E + ++ M
Sbjct: 190 TSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMR 249
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
+ G+EP +I+ F K +A +V++ M ++ + TY I++D +CK G++
Sbjct: 250 NRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQM-LQSGTVVSTVTYNIILDGLCKAGRV 308
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY----KVVEEIEKPDISLYHGL 320
++AY M +RG A +T S+++ G + G + A ++++ +P++ Y+ +
Sbjct: 309 AEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNII 368
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG-------------RKG 367
I+GL R + +A F ++++R P ++T+ L G + +G
Sbjct: 369 IRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQG 428
Query: 368 PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHY 416
P ++ +I + G+ +AG A + +++RGV +N + +
Sbjct: 429 TSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRW 477
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 131/284 (46%), Gaps = 7/284 (2%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRR-RLVNDKTFKIALMTLAEVRELKKMV 128
+ +++T+ ++D K++ I ++M + +V+ T+ I L L + + +
Sbjct: 253 YEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAY 312
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGY 187
F M + GC ++ + ++ C V A L + L +PN ++Y +I+G
Sbjct: 313 ATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGL 372
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFF-KINKDDEAMKVFQMMRVKRMDDL 246
C G L +A + + P + + + +++ + +++F+ M V +
Sbjct: 373 CRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESM-VSQGTSP 431
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
L +Y I++D +C+ G + A + EM RG+ D + +++I L GR+ EA +V
Sbjct: 432 NLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVF 491
Query: 307 EEIEK---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
E+E+ PD Y L+ GL R R EA + M +GC P
Sbjct: 492 RELERRSAPDAWSYWSLLDGLSRCERMEEARLLSFHMKLQGCAP 535
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 136/359 (37%), Gaps = 69/359 (19%)
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPS-------IDVVDK--------- 217
P+ +A+ +I G C L EA + G EP ID + K
Sbjct: 4 SPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQ 63
Query: 218 -------------------MIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWM 258
+++ K + DEAM V + M V++ + L TY +VID +
Sbjct: 64 LLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQM-VEKGNSPTLKTYTVVIDGL 122
Query: 259 CKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK------- 311
K G++ +A + +M G D +++I GL G+ EAY + +E
Sbjct: 123 SKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATA 182
Query: 312 -PDISLYHGLIKGLLRLRRAREATQVF-REMIKRGCEPTMHTYIMLLQGHLGKRGR---- 365
PD+ Y LI GL + R EA QVF E ++RG P TY ++ G L K GR
Sbjct: 183 VPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDG-LCKLGRVEEG 241
Query: 366 ---------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHY 416
+G +P + G +KA A + +++ G V YN L
Sbjct: 242 CERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDG 301
Query: 417 YSNEEGV-------VMFEEVGKKLREVGLADLADIFQRYGKKMATRE---RRRNRAIEP 465
V + EE G V + L D F G A E R +R EP
Sbjct: 302 LCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEP 360
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 123/295 (41%), Gaps = 43/295 (14%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMV 128
F +++T+ ++D + K ++ E EM R D AL+ + + + K
Sbjct: 218 FIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAH 277
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGY 187
+ M G S N ++ LC+ V EA L + E + Y L+ G+
Sbjct: 278 RVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGF 337
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C G++ A +++ M D G EP+
Sbjct: 338 CSEGNVSAAVELFRRMLDRGCEPN------------------------------------ 361
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR-GRLREAYKVV 306
L +Y I+I +C+ GK+++AY E++ +R + D T ++ ++GL R + + ++
Sbjct: 362 LVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELF 421
Query: 307 EEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
E + P++ Y L+ G+ R A ++FREM+ RG P + + L++
Sbjct: 422 ESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIR 476
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 132/294 (44%), Gaps = 25/294 (8%)
Query: 142 SLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIW 200
+L NKV+ LC+R V+EA L+ K + + N Y I+G C+ G L EA ++
Sbjct: 188 NLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLV 247
Query: 201 NLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM--DDLGLSTYRIVIDWM 258
+ M P + + +I K + EAM + M + DD TY +ID
Sbjct: 248 DGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDF---TYNTIIDGY 303
Query: 259 CKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDI 314
CK + +A +L++ +G D +T S+I GL A G + A ++ E + KPDI
Sbjct: 304 CKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDI 363
Query: 315 SLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNF 374
+Y+ L+KGL A QV EM + GC P + TY +++ G L K G +V
Sbjct: 364 VVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVING-LCKMGNISDATVVMN 422
Query: 375 DTIFVG-------------GLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
D I G G K K A + VER+ G+ YN L+
Sbjct: 423 DAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLN 476
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 99/195 (50%), Gaps = 9/195 (4%)
Query: 170 SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD 229
++ IKP+ + Y L+KG C G ++ A ++ N M +EG P I + +I K+
Sbjct: 356 AKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNIS 415
Query: 230 EAMKVFQ--MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLS 287
+A V +M+ D + T+ +ID CKR K+ A ++E M++ GI D +T +
Sbjct: 416 DATVVMNDAIMKGYLPD---VFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYN 472
Query: 288 SIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
S++ GL G++ E + +E+ P+ Y+ LI+ R + EA++V +M +
Sbjct: 473 SVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQE 532
Query: 344 GCEPTMHTYIMLLQG 358
G P ++ L+ G
Sbjct: 533 GLHPDAVSFNTLIYG 547
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 112/240 (46%), Gaps = 7/240 (2%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIM 134
TFN ++D K +D + ++ M + D T+ L L + ++ ++ F M
Sbjct: 435 TFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEM 494
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDL 193
GC + N +++ C+ + EA +I+K+S E + P+ +++ LI G+C GDL
Sbjct: 495 ILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDL 554
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK--RMDDLGLSTY 251
A ++ + ++G+ + D + +I F A K+F M K R D TY
Sbjct: 555 EGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSY---TY 611
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK 311
R++ID CK + +AY L EM K+G T +I L R+ +A ++ + K
Sbjct: 612 RVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVK 671
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/332 (20%), Positives = 152/332 (45%), Gaps = 41/332 (12%)
Query: 67 QPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELK 125
Q C + T+N ++D K + E L++ + V D+ +L+ L +++
Sbjct: 287 QGCLP-DDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVE 345
Query: 126 KMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLI 184
+ + F+ G + + + N +VK LC + L++ A ++ +++E P+ Y +I
Sbjct: 346 RALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVI 405
Query: 185 KGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM------ 238
G C +G++ +A+ + N +G+ P + + +I+ + K K D A+++ + M
Sbjct: 406 NGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIA 465
Query: 239 --------------RVKRMDDLGLS--------------TYRIVIDWMCKRGKISQAYTM 270
+ +++++ + TY I+I+ C+ K+ +A +
Sbjct: 466 PDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKV 525
Query: 271 LEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDIS----LYHGLIKGLLR 326
+ +M + G+ D ++ +++IYG G L AY + +++E+ S ++ LI
Sbjct: 526 IVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSG 585
Query: 327 LRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
A ++F EM+ +G +TY +L+ G
Sbjct: 586 KLNMHMAEKIFDEMLSKGHRADSYTYRVLIDG 617
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 6/212 (2%)
Query: 146 LNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
N ++ C+R + A L+ ++ E+ I P+ I Y ++ G C G + E ++ + M
Sbjct: 436 FNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMI 495
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
+G P+ + +IE F + NK +EA KV M + + +S + +I C+ G +
Sbjct: 496 LKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVS-FNTLIYGFCRNGDL 554
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGL 320
AY + +++ ++G A T +++I + + A K+ +E+ + D Y L
Sbjct: 555 EGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVL 614
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
I G + A EMIK+G P+M T+
Sbjct: 615 IDGSCKTANVDRAYMHLVEMIKKGFIPSMSTF 646
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 132/294 (44%), Gaps = 25/294 (8%)
Query: 142 SLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIW 200
+L NKV+ LC+R V+EA L+ K + + N Y I+G C+ G L EA ++
Sbjct: 185 NLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLV 244
Query: 201 NLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM--DDLGLSTYRIVIDWM 258
+ M P + + +I K + EAM + M + DD TY +ID
Sbjct: 245 DGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDF---TYNTIIDGY 300
Query: 259 CKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDI 314
CK + +A +L++ +G D +T S+I GL A G + A ++ E + KPDI
Sbjct: 301 CKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDI 360
Query: 315 SLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNF 374
+Y+ L+KGL A QV EM + GC P + TY +++ G L K G +V
Sbjct: 361 VVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVING-LCKMGNISDATVVMN 419
Query: 375 DTIFVG-------------GLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
D I G G K K A + VER+ G+ YN L+
Sbjct: 420 DAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLN 473
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 99/195 (50%), Gaps = 9/195 (4%)
Query: 170 SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD 229
++ IKP+ + Y L+KG C G ++ A ++ N M +EG P I + +I K+
Sbjct: 353 AKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNIS 412
Query: 230 EAMKVFQ--MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLS 287
+A V +M+ D + T+ +ID CKR K+ A ++E M++ GI D +T +
Sbjct: 413 DATVVMNDAIMKGYLPD---VFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYN 469
Query: 288 SIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
S++ GL G++ E + +E+ P+ Y+ LI+ R + EA++V +M +
Sbjct: 470 SVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQE 529
Query: 344 GCEPTMHTYIMLLQG 358
G P ++ L+ G
Sbjct: 530 GLHPDAVSFNTLIYG 544
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 110/236 (46%), Gaps = 7/236 (2%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIM 134
TFN ++D K +D + ++ M + D T+ L L + ++ ++ F M
Sbjct: 432 TFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEM 491
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDL 193
GC + N +++ C+ + EA +I+K+S E + P+ +++ LI G+C GDL
Sbjct: 492 ILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDL 551
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK--RMDDLGLSTY 251
A ++ + ++G+ + D + +I F A K+F M K R D TY
Sbjct: 552 EGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSY---TY 608
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
R++ID CK + +AY L EM K+G T +I L R+ +A ++
Sbjct: 609 RVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIH 664
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/332 (20%), Positives = 152/332 (45%), Gaps = 41/332 (12%)
Query: 67 QPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELK 125
Q C + T+N ++D K + E L++ + V D+ +L+ L +++
Sbjct: 284 QGCLP-DDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVE 342
Query: 126 KMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLI 184
+ + F+ G + + + N +VK LC + L++ A ++ +++E P+ Y +I
Sbjct: 343 RALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVI 402
Query: 185 KGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM------ 238
G C +G++ +A+ + N +G+ P + + +I+ + K K D A+++ + M
Sbjct: 403 NGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIA 462
Query: 239 --------------RVKRMDDLGLS--------------TYRIVIDWMCKRGKISQAYTM 270
+ +++++ + TY I+I+ C+ K+ +A +
Sbjct: 463 PDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKV 522
Query: 271 LEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDIS----LYHGLIKGLLR 326
+ +M + G+ D ++ +++IYG G L AY + +++E+ S ++ LI
Sbjct: 523 IVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSG 582
Query: 327 LRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
A ++F EM+ +G +TY +L+ G
Sbjct: 583 KLNMHMAEKIFDEMLSKGHRADSYTYRVLIDG 614
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 6/212 (2%)
Query: 146 LNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
N ++ C+R + A L+ ++ E+ I P+ I Y ++ G C G + E ++ + M
Sbjct: 433 FNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMI 492
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
+G P+ + +IE F + NK +EA KV M + + +S + +I C+ G +
Sbjct: 493 LKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVS-FNTLIYGFCRNGDL 551
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGL 320
AY + +++ ++G A T +++I + + A K+ +E+ + D Y L
Sbjct: 552 EGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVL 611
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
I G + A EMIK+G P+M T+
Sbjct: 612 IDGSCKTANVDRAYMHLVEMIKKGFIPSMSTF 643
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 146/309 (47%), Gaps = 9/309 (2%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVN 129
A N +T+N M+ + +S ++ + +EM L D ALM L + LK+
Sbjct: 277 AMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKA 336
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK--LSEWIKPNEIAYGWLIKGY 187
M+ G + ++ + +V + EA + IL +S ++PN+I Y LI+G
Sbjct: 337 LLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEA-FDILNEMISAGVQPNKIMYDNLIRGL 395
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C +G L ASK+ N M G P +++ F+ D A ++ MR +
Sbjct: 396 CKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILP-N 454
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
TY I+I+ +C+ G+ +A +LEEM G++ + + +I G G + A + +E
Sbjct: 455 AYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLE 514
Query: 308 EIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
+ K PD+ Y+ LIKGL + R EA + + ++ KRG P TY L+ G+ R
Sbjct: 515 NMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTR 574
Query: 364 GRKGPDPLV 372
+ D L+
Sbjct: 575 NLEKADQLL 583
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 154/360 (42%), Gaps = 32/360 (8%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T+ L + R+ F M C + N ++ LC+ V EA ++
Sbjct: 247 TYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEM 306
Query: 170 SEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++ + P+ YG L+ G C G L EA + + M+ G +P++ V +++ F K K
Sbjct: 307 VDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKA 366
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVID----WMCKRGKISQAYTMLEEMFKRGIEADNL 284
EA + + M G+ +I+ D +CK G++ +A +L EM K G D
Sbjct: 367 AEAFDI-----LNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTF 421
Query: 285 TLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREM 340
T ++ G A++++ E+ P+ Y +I GL + ++EA + EM
Sbjct: 422 TYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEM 481
Query: 341 IKRGCEPTMHTYIMLLQGHLGKRGRKG---------------PDPLVNFDTIFVGGLVKA 385
I G +P Y L+ GH K G PD L ++++ + GL
Sbjct: 482 ISEGLKPNAFMYAPLIIGH-SKEGHISLACESLENMTKANVLPD-LFCYNSL-IKGLSTV 538
Query: 386 GKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLADIF 445
G+ +A +Y +V RG+ F Y+ +H Y + +++ +++ GL AD +
Sbjct: 539 GRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTY 598
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 154/338 (45%), Gaps = 36/338 (10%)
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-----IKPNEIAYGWLIKGY 187
+M D G + N ++K L L +A L+ KL + I P+ Y ++ +
Sbjct: 200 MMGDLGLAPTRRCCNGLLKDL----LRADAMELVWKLKGFMEGAGIPPDVYTYSTFLEAH 255
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C D A K++ M + + MI + +EA + M D G
Sbjct: 256 CKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKE-----EMVDYG 310
Query: 248 LS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
LS TY +++ +CK G++ +A +L+EM G++ + + ++++ G + G+ EA+
Sbjct: 311 LSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAF 370
Query: 304 KVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
++ E+ +P+ +Y LI+GL ++ + A+++ EMIK G P TY L+QGH
Sbjct: 371 DILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGH 430
Query: 360 LGKRGRKGPDPLVN------------FDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPR 407
+ G L+N I + GL + G+S +A +E +++ G++
Sbjct: 431 FQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNA 490
Query: 408 FDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLADIF 445
F Y + +S E + + E + + + + L D+F
Sbjct: 491 FMYAPLIIGHSKEGHISLACESLENMTKANV--LPDLF 526
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 115/270 (42%), Gaps = 29/270 (10%)
Query: 147 NKVVKTLCQRKLVVEAK-YLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N ++K L + EA+ Y + P+E Y LI GYC +L +A ++ M +
Sbjct: 529 NSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLN 588
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKIS 265
G +P+ D ++E +FK N ++ + Q M + D Y IVI + + +
Sbjct: 589 SGLKPNADTYTDLLEGYFKSNDHEKVSSILQSM-LGSGDKPDNHIYGIVIRNLSRSENME 647
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLI 321
A+ +L E+ K G+ D SS+I GL + +A +++E+ K P I Y+ LI
Sbjct: 648 VAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALI 707
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGG 381
G R A VF ++ +G P TY L+ G+
Sbjct: 708 DGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGN---------------------- 745
Query: 382 LVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
K G DA + +++RG+ F YN
Sbjct: 746 -CKNGDITDAFDLYKDMLDRGIAPDAFVYN 774
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 135/310 (43%), Gaps = 9/310 (2%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAE 120
Y Q + + T++ ++ K+RN++ + LQ+M L N T+ L +
Sbjct: 548 YAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFK 607
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE--WIKPNEI 178
+ +K+ + M G + + V++ L R +E +++L E + P+
Sbjct: 608 SNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNL-SRSENMEVAFMVLTEVEKNGLVPDLH 666
Query: 179 AYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
Y LI G C + D+ +A + + M EG EP I + +I+ F + A VF +
Sbjct: 667 IYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSI 726
Query: 239 RVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR 298
K + TY +ID CK G I+ A+ + ++M RGI D + + G
Sbjct: 727 LAKGLLP-NCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAAD 785
Query: 299 LREAYKVVEEIEK---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
L +A + EE+ +SL+ L++G + R +E ++ M+ R P T +
Sbjct: 786 LEQALFLTEEMFNRGYAHVSLFSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENV 845
Query: 356 LQGHLGKRGR 365
+ GK G+
Sbjct: 846 IT-EFGKAGK 854
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 108/237 (45%), Gaps = 10/237 (4%)
Query: 84 IGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVNFFHIMNDCGCEYS 142
+ +S N+++ + L E+ + LV D +L++ L ++ +++K V M G E
Sbjct: 640 LSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPG 699
Query: 143 LEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWN 201
+ N ++ C+ + A+ + L++ + PN + Y LI G C GD+ +A ++
Sbjct: 700 IVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYK 759
Query: 202 LMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG---LSTYRIVIDWM 258
M D G P D + D A + + M + G +S + ++
Sbjct: 760 DMLDRGIAP-----DAFVYNVLATGCSDAADLEQALFLTEEMFNRGYAHVSLFSTLVRGF 814
Query: 259 CKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDIS 315
CKRG++ + +L M R I + T+ ++I G+L EA++V E+++ S
Sbjct: 815 CKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQKKAS 871
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 41/85 (48%)
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
+ L++G+C G L E K+ ++M D P+ V+ +I F K K EA +VF ++
Sbjct: 807 FSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQ 866
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKI 264
K+ + ++ M +G I
Sbjct: 867 QKKASQSSTDRFSLLFTDMINKGLI 891
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 132/294 (44%), Gaps = 25/294 (8%)
Query: 142 SLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIW 200
+L NKV+ LC+R V+EA L+ K + + N Y I+G C+ G L EA ++
Sbjct: 186 NLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLV 245
Query: 201 NLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM--DDLGLSTYRIVIDWM 258
+ M P + + +I K + EAM + M + DD TY +ID
Sbjct: 246 DGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDF---TYNTIIDGY 301
Query: 259 CKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDI 314
CK + +A +L++ +G D +T S+I GL A G + A ++ E + KPDI
Sbjct: 302 CKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDI 361
Query: 315 SLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNF 374
+Y+ L+KGL A QV EM + GC P + TY +++ G L K G +V
Sbjct: 362 VVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVING-LCKMGNISDATVVMN 420
Query: 375 DTIFVG-------------GLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
D I G G K K A + VER+ G+ YN L+
Sbjct: 421 DAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLN 474
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 99/195 (50%), Gaps = 9/195 (4%)
Query: 170 SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD 229
++ IKP+ + Y L+KG C G ++ A ++ N M +EG P I + +I K+
Sbjct: 354 AKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNIS 413
Query: 230 EAMKVFQ--MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLS 287
+A V +M+ D + T+ +ID CKR K+ A ++E M++ GI D +T +
Sbjct: 414 DATVVMNDAIMKGYLPD---VFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYN 470
Query: 288 SIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
S++ GL G++ E + +E+ P+ Y+ LI+ R + EA++V +M +
Sbjct: 471 SVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQE 530
Query: 344 GCEPTMHTYIMLLQG 358
G P ++ L+ G
Sbjct: 531 GLHPDAVSFNTLIYG 545
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 110/236 (46%), Gaps = 7/236 (2%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIM 134
TFN ++D K +D + ++ M + D T+ L L + ++ ++ F M
Sbjct: 433 TFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEM 492
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDL 193
GC + N +++ C+ + EA +I+K+S E + P+ +++ LI G+C GDL
Sbjct: 493 ILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDL 552
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK--RMDDLGLSTY 251
A ++ + ++G+ + D + +I F A K+F M K R D TY
Sbjct: 553 EGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSY---TY 609
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
R++ID CK + +AY L EM K+G T +I L R+ +A ++
Sbjct: 610 RVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIH 665
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/332 (20%), Positives = 152/332 (45%), Gaps = 41/332 (12%)
Query: 67 QPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELK 125
Q C + T+N ++D K + E L++ + V D+ +L+ L +++
Sbjct: 285 QGCLP-DDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVE 343
Query: 126 KMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLI 184
+ + F+ G + + + N +VK LC + L++ A ++ +++E P+ Y +I
Sbjct: 344 RALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVI 403
Query: 185 KGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM------ 238
G C +G++ +A+ + N +G+ P + + +I+ + K K D A+++ + M
Sbjct: 404 NGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIA 463
Query: 239 --------------RVKRMDDLGLS--------------TYRIVIDWMCKRGKISQAYTM 270
+ +++++ + TY I+I+ C+ K+ +A +
Sbjct: 464 PDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKV 523
Query: 271 LEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDIS----LYHGLIKGLLR 326
+ +M + G+ D ++ +++IYG G L AY + +++E+ S ++ LI
Sbjct: 524 IVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSG 583
Query: 327 LRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
A ++F EM+ +G +TY +L+ G
Sbjct: 584 KLNMHMAEKIFDEMLSKGHRADSYTYRVLIDG 615
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 6/212 (2%)
Query: 146 LNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
N ++ C+R + A L+ ++ E+ I P+ I Y ++ G C G + E ++ + M
Sbjct: 434 FNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMI 493
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
+G P+ + +IE F + NK +EA KV M + + +S + +I C+ G +
Sbjct: 494 LKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVS-FNTLIYGFCRNGDL 552
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGL 320
AY + +++ ++G A T +++I + + A K+ +E+ + D Y L
Sbjct: 553 EGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVL 612
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
I G + A EMIK+G P+M T+
Sbjct: 613 IDGSCKTANVDRAYMHLVEMIKKGFIPSMSTF 644
>gi|326488077|dbj|BAJ89877.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 395
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 151/290 (52%), Gaps = 7/290 (2%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIM 134
++N ++ + ID+ E EM R D+ T+ + L + + ++ M+ M
Sbjct: 71 SYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEM 130
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDL 193
++ G + + N ++ L + K++ EA L +L SE P YG L+ G G++
Sbjct: 131 HNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNI 190
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
+A +++ M + G EP+ + + ++ + ++ ++F+ M + M+ + +Y +
Sbjct: 191 EDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNP-DIKSYTV 249
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK-- 311
VID +C G+++ + +++ G+E D +T + +I+GL GRL EA + ++EK
Sbjct: 250 VIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKG 309
Query: 312 --PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
P++ Y+ LI L + +A EA +++ E++ +G +P + TY L++G+
Sbjct: 310 IAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGY 359
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 118/288 (40%), Gaps = 44/288 (15%)
Query: 75 ITFNRMVDIIGKSRNID----LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNF 130
+T+N ++ + KS+ +D L+++ + E T+ L L + ++
Sbjct: 140 VTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPC---TYGPLLDGLLKDGNIEDAEAL 196
Query: 131 FHIMNDCGCEYSLEMLNKVV---KTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGY 187
F M +CGCE + + N ++ + + V E +++ + + P+ +Y +I
Sbjct: 197 FDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVE--QGMNPDIKSYTVVIDTL 254
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C G L + + +TD G EP + + +I K + +EA+ ++ M K +
Sbjct: 255 CADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAP-N 313
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
L TY +I ++ K GK ++A M EE+ +G
Sbjct: 314 LYTYNSLILYLGKAGKAAEAGKMYEELLAKGW---------------------------- 345
Query: 308 EIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
KP++ Y+ LI+G A + MI GC P TY+ L
Sbjct: 346 ---KPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQL 390
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 102/265 (38%), Gaps = 61/265 (23%)
Query: 227 KDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEAD 282
K EA+ ++ VK+ ++LG+S +Y +I + I A + EM + G + D
Sbjct: 46 KHKEALAAHEL--VKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPD 103
Query: 283 NLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQ--- 335
T I+ + R+ + K+ EE+ K Y+ +I GL++ + EA
Sbjct: 104 EFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYY 163
Query: 336 --------------------------------VFREMIKRGCEPTMHTYIMLLQGH---- 359
+F EM++ GCEP Y +LL G+
Sbjct: 164 QLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAG 223
Query: 360 --------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
+G +P + T+ + L G+ D Y +++ + G+E YN
Sbjct: 224 DTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYN 283
Query: 412 KFLHYYSN----EEGVVMFEEVGKK 432
+H EE + ++ ++ KK
Sbjct: 284 LLIHGLGKSGRLEEALSLYNDMEKK 308
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 20/179 (11%)
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPD 313
+++ + KR ++ E + G+ D+L LS II L A+++V++ E
Sbjct: 5 LMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKKFENLG 64
Query: 314 ISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR---- 365
+SL Y+ LI GL+ A ++F EM + GC+P TY ++L +GK R
Sbjct: 65 VSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDA-MGKSMRIEDM 123
Query: 366 ---------KG-PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
KG V ++TI + GLVK+ +A ++M+ G Y L
Sbjct: 124 LKIQEEMHNKGYKSTYVTYNTI-ISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLL 181
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 129/274 (47%), Gaps = 29/274 (10%)
Query: 146 LNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
+N V+K LC+ V EA LI ++ + + P+ ++Y LI G C L EA + M
Sbjct: 1 MNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEME 60
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
G P+ +++ K + DEAM++ + M+ K+ D + Y +I C G +
Sbjct: 61 AAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMK-KKGFDADVVLYGTLISGFCNNGNL 119
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGL 320
+ + +EM +GI A+ +T S +++GL G+ +EA V+ + + PD+ Y GL
Sbjct: 120 DRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGL 179
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVG 380
I GL + RA A + M+++G EP+ TY +LL
Sbjct: 180 IDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLS----------------------- 216
Query: 381 GLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
GL K G +DA K + ++ +G + YN +
Sbjct: 217 GLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLM 250
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 139/286 (48%), Gaps = 27/286 (9%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
L + I N + Y L+ G C +G EA+ + N M + G P + +I+ K +
Sbjct: 130 LGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRA 189
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
AM + +M V++ ++ TY +++ +CK G + A+ +L M ++G +AD +T ++
Sbjct: 190 THAMDLLNLM-VEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNT 248
Query: 289 IIYGLLARGRLREAYKVV------EEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIK 342
++ GL +G++ EA K+ E +P++ ++ LI GL + R +A ++ R+M+K
Sbjct: 249 LMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVK 308
Query: 343 RGCEPTMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSL 389
+G + TY MLL G L K G+ G P +I + G K + L
Sbjct: 309 KGSCGNLVTYNMLLGGCL-KAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKM-RML 366
Query: 390 DAAKYVERVM-NRGVEVPRFDYNKFLHYY----SNEEGVVMFEEVG 430
+ AK + M G+ FDYN + S E+ +F+E+G
Sbjct: 367 NIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMG 412
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 146/315 (46%), Gaps = 26/315 (8%)
Query: 128 VNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKG 186
++ ++M + G E S N ++ LC+ LV++A K L + + + K + + Y L+KG
Sbjct: 193 MDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKG 252
Query: 187 YCDVGDLIEASKIWNLMTDE--GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD 244
CD G + EA K++N M D EP++ + +I K + +A+K+ + M VK+
Sbjct: 253 LCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKM-VKKGS 311
Query: 245 DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK 304
L TY +++ K GKI +A + +++ G ++ T S +I G L A
Sbjct: 312 CGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKG 371
Query: 305 VVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL 360
+ E+ P + Y+ L+ L + +A +F+EM CEP + ++ ++ G L
Sbjct: 372 LFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTL 431
Query: 361 GKRG-------------RKG--PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEV 405
K G G PD L F T+ + L K G+ +A +ER++ G
Sbjct: 432 -KAGDFQFVKELQMKMVEMGLRPDALT-FSTL-INRLSKLGELDEAKSALERMVASGFTP 488
Query: 406 PRFDYNKFLHYYSNE 420
Y+ L S++
Sbjct: 489 DALVYDSLLKGLSSK 503
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 131/295 (44%), Gaps = 11/295 (3%)
Query: 73 NSITFNRMVDIIGK-SRNIDLF--WETLQEMGRRR-LVNDKTFKIALMTLAEVRELKKMV 128
+++T+N ++ + K ID F + E G++ +V T L +V E K+
Sbjct: 207 SNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLF 266
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGY 187
N +C E ++ N ++ LC+ + +A + K+ + N + Y L+ G
Sbjct: 267 NSMFDNENC-LEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGC 325
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
G + EA ++W + D GF P+ +I+ F K+ + A +F MR ++
Sbjct: 326 LKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNP-A 384
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA----Y 303
L Y ++ +CK G + QA ++ +EM E D ++ +++I G L G +
Sbjct: 385 LFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQM 444
Query: 304 KVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
K+VE +PD + LI L +L EA M+ G P Y LL+G
Sbjct: 445 KMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKG 499
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 72/175 (41%), Gaps = 4/175 (2%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTF--KIALMTLAEVRELKKM 127
F NS T++ ++D K R +++ EM R +N F + +L + L++
Sbjct: 346 FVPNSFTYSILIDGFCKMRMLNIAKGLFCEM-RTHGLNPALFDYNTLMASLCKEGSLEQA 404
Query: 128 VNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKG 186
+ F M + CE + N ++ + K L +K+ E ++P+ + + LI
Sbjct: 405 KSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINR 464
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK 241
+G+L EA M GF P V D +++ E + + M K
Sbjct: 465 LSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAK 519
>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Brachypodium distachyon]
Length = 571
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 147/298 (49%), Gaps = 11/298 (3%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N +TFN +V+ K N +EM ++ + T+ + L ++++ V
Sbjct: 257 NEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLV 316
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDV 190
M D G +L LN V+ C++ ++ +A+ I + + +KPN + Y L+ GY +
Sbjct: 317 DEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRL 376
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK--RMDDLGL 248
+ +A + M+ +G P+ + + +I F + + MR+K R D +
Sbjct: 377 DKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRAD---I 433
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY ++I +C +G++ +A +L+EM G+E +LT ++II G +G ++ AY++
Sbjct: 434 VTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTR 493
Query: 309 IEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
+EK ++ Y+ IK L R+ + E ++ EM+++G P TY + +G + K
Sbjct: 494 MEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEGMMEK 551
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/412 (21%), Positives = 173/412 (41%), Gaps = 45/412 (10%)
Query: 20 YSPESRLHSSLSSCNFNLTHEFFLQICN-NFPLSWRPVYLFFQYTQKAQPCFAHNSITFN 78
+SP S + + +S + + L + + + PL+ Y F A P ++ + N
Sbjct: 98 HSPASIVRALPASSSPLIADLLVLALASASQPLA---SYEAFLLAGDAHPRHRPSAFSVN 154
Query: 79 RMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIMNDC 137
R++ + + +DL + RRR+ D TF I + L + +L+K + +
Sbjct: 155 RLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDVAKDIRAW 214
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW----IKPNEIAYGWLIKGYCDVGDL 193
G S+ N ++ C+R ++ L E I PNE+ + L+ GYC +
Sbjct: 215 GLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNGYCKDSNT 274
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG----LS 249
A +++ M +G S+ ++ K +E +K+ V M DLG L+
Sbjct: 275 AAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKL-----VDEMKDLGLVPNLA 329
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
T V++ CK+G ++ A ++ M ++ ++ + +T + ++ G ++++A V E +
Sbjct: 330 TLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAM 389
Query: 310 E----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
+P+ +Y+ LI G R R + + EM +G + TY
Sbjct: 390 SGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTY------------- 436
Query: 366 KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
+ +G L G+ A K ++ ++ G+E YN ++ Y
Sbjct: 437 ----------NVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGY 478
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
++ + + Y LI C G++ +A K+ + M G EP + +I + + A
Sbjct: 429 VRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAY 488
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
++ M K + TY + I +C+ GK+ + +L EM ++G+ + +T +I G
Sbjct: 489 EIRTRME-KGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEG 547
Query: 293 LLARG 297
++ +G
Sbjct: 548 MMEKG 552
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 174/388 (44%), Gaps = 38/388 (9%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVN 129
A +++ F ++ ++ +EM +R L D+ AL+ L ELK+
Sbjct: 354 ALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADR 413
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYC 188
M D G + + ++ C+R +VEA + ++ + PN + Y L G C
Sbjct: 414 VLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLC 473
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK--RMDDL 246
GD+ A+++ + M ++G E ++ + +I K ++AM++ M R D
Sbjct: 474 KQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTD-- 531
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
+ TY +ID +CK G+ +A+ ML+EM +GI+ T + ++ G GR+ K++
Sbjct: 532 -VYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLL 590
Query: 307 E-EIEK---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
E +EK P++ Y+ L+K + + T++++ M + P +TY +L++GH
Sbjct: 591 EWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKA 650
Query: 363 RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVE--RVMNRGVEVPRFDYNKFLHYYSNE 420
R K F +++ G L A+ Y R++N+ KF
Sbjct: 651 RNMKEA-------LYFHQEMIEKGLRLTASSYSALIRLLNKK--------KKF------S 689
Query: 421 EGVVMFEEVGKKLREVGLADLADIFQRY 448
E V F+ K+R GL D++ Y
Sbjct: 690 EARVFFD----KMRNEGLTAEPDVYSFY 713
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 125/277 (45%), Gaps = 36/277 (12%)
Query: 151 KTLCQRKLVVEAKYLILKLSEWIK--------PNEIAYGWLIKGYCDVGDLIEASKIWNL 202
K +C ++++A +L + + P+ + YG ++ GYC G+L A K+ +
Sbjct: 253 KNVCSHNILLKALLSAGRLKDACQHFDEMSSPPDVVTYGTMVHGYCVRGELENAVKLLDE 312
Query: 203 MTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRG 262
M +G E + V +I + +A++V + M + + L + VI C +G
Sbjct: 313 MAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVA-LDAVVFTTVISGFCSKG 371
Query: 263 KISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP----DISLYH 318
++ A + EEM KRG+ AD +T +++I GL G L+EA +V++E+ D+ Y
Sbjct: 372 DLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYT 431
Query: 319 GLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIF 378
LI G + EA +V EM+ R P + TY T
Sbjct: 432 VLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTY-----------------------TAL 468
Query: 379 VGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
GL K G A + + + N+G+E+ + YN ++
Sbjct: 469 SDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLIN 505
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 135/290 (46%), Gaps = 7/290 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTL-AEVRELKKMVNFFHI 133
+T+ MV ++ + L EM + L ++ T +++ L ++ +
Sbjct: 288 VTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLED 347
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M G + V+ C + + A+ L ++ + + + + + LI G C G+
Sbjct: 348 MTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGE 407
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
L EA ++ M D+G + + +I+ + K EA +V M +R+ + TY
Sbjct: 408 LKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAP-NVVTYT 466
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
+ D +CK+G + A +L EM +G+E + T +S+I GL G L +A +++ E+E
Sbjct: 467 ALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAA 526
Query: 311 --KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+ D+ Y LI L + A + +EM+ +G +P++ TY +L+ G
Sbjct: 527 GHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNG 576
>gi|116310235|emb|CAH67244.1| OSIGBa0140O07.12 [Oryza sativa Indica Group]
Length = 581
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 162/335 (48%), Gaps = 30/335 (8%)
Query: 70 FAHNSITFNRMVDIIGKSRNID---LFWETLQEMGRRRLVNDK--TFKIALMTLAEVREL 124
+A+N + M +IG+ R D LF +Q+ RL + +F + + + V ++
Sbjct: 214 YAYNKL----MSSLIGRGRVHDVVALFERWIQD----RLYSPDVWSFNVVIKGVCRVGQV 265
Query: 125 KKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE--WIKPNEIAYGW 182
+K + MN+ GC N +V LC+ V ++ +L PN + +
Sbjct: 266 QKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTS 325
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ-MMRVK 241
+I GYC G L +A ++N M G P+ + +I + K+ A++V+Q M R++
Sbjct: 326 VISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLR 385
Query: 242 RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
D+ T+ +ID C+ G++ A + +M + I+ + T S II+ L + R E
Sbjct: 386 CPPDV--VTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDE 443
Query: 302 AYKVVEEIE-KPDIS----LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
A +++ E+ +PDI+ +Y+ +I L + + EA + + M ++GC P +TY +L+
Sbjct: 444 AIRLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILI 503
Query: 357 QGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDA 391
G+ K ++ +F +V+AG S D+
Sbjct: 504 IGYCMKS-------RISEAIMFFHEMVEAGCSPDS 531
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 123/273 (45%), Gaps = 7/273 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV--NDKTFKIALMTLAEVRELKKMVNF 130
+++T N +VD + ++ + E L+ + R + N TF + + +L+ +
Sbjct: 283 DTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAV 342
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCD 189
++ M G + N ++ + + A + +++ P+ + + LI GYC
Sbjct: 343 YNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCR 402
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
G L +A +IW+ M +P++ +I + K N+ DEA+++ + ++
Sbjct: 403 CGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIRLLNELNLRPDIAPQAF 462
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA----YKV 305
Y VID +CK GK+ +A + + M ++G D T + +I G + R+ EA +++
Sbjct: 463 IYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEM 522
Query: 306 VEEIEKPDISLYHGLIKGLLRLRRAREATQVFR 338
VE PD + I LL+ E V R
Sbjct: 523 VEAGCSPDSITVNCFISCLLKAGMPNEVDHVMR 555
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/296 (17%), Positives = 130/296 (43%), Gaps = 25/296 (8%)
Query: 142 SLEMLNKVVKTLCQRKLVVEAKYLILKLSEWI--KPNEIAYGWLIKGYCDVGDLIEASK- 198
S +++ LC+ +A L +++ P+ +L+ C +L++AS
Sbjct: 141 SAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSS-CTCANLLDASAT 199
Query: 199 IWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWM 258
+ + ++ G +K++ + + + + +F+ R+ + ++ +VI +
Sbjct: 200 LLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRLYSPDVWSFNVVIKGV 259
Query: 259 CKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK-----PD 313
C+ G++ +A ++E M + G D +T + I+ GL + ++V+ +++ P+
Sbjct: 260 CRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPN 319
Query: 314 ISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKG------ 367
+ + +I G + + +A V+ +M+ G P TY +L+ G+ GK G G
Sbjct: 320 VVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGY-GKVGDLGSAVEVY 378
Query: 368 --------PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
P +V F ++ + G + G+ DA + + ++ + ++ +H
Sbjct: 379 QQMTRLRCPPDVVTFSSL-IDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIH 433
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/231 (18%), Positives = 94/231 (40%), Gaps = 22/231 (9%)
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQ 266
PS ++I + + +A+++F M ++ +
Sbjct: 137 SITPSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDA 196
Query: 267 AYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE-----IEKPDISLYHGLI 321
+ T+L + + G + + ++ L+ RGR+ + + E + PD+ ++ +I
Sbjct: 197 SATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRLYSPDVWSFNVVI 256
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG---------------HLGKRGRK 366
KG+ R+ + ++A ++ M + GC P T+ +++ G L + G
Sbjct: 257 KGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVC 316
Query: 367 GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
P+ +V F ++ + G KAGK DA ++ G+ YN ++ Y
Sbjct: 317 MPN-VVTFTSV-ISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGY 365
>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
Length = 651
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/389 (22%), Positives = 171/389 (43%), Gaps = 58/389 (14%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
N +T++ +++ + K +D +E Q M RR N T I + L + + +++ +
Sbjct: 253 NVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLY 312
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW--IKPNEIAYGWLIKGYCD 189
H M + GC + N ++ LC+ V EA L + E N + Y L GY
Sbjct: 313 HRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAA 372
Query: 190 VGDLIEASKIWNLMTDEGFEPS-----------------------------------IDV 214
+G + +A +I++++ D+GF P ++
Sbjct: 373 LGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNT 432
Query: 215 VDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEM 274
+ ++ F+ N + A+++F M + D L Y +V++ M + K ++A +LE++
Sbjct: 433 LSAVLGGLFEGNHTERAIQLFDSMAARGCTDDAL-IYNLVVEGMARASKHNKALAVLEQV 491
Query: 275 FK---RGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRL 327
R + + +++ L GR +A +++ ++ + +S Y+GL+ GL RL
Sbjct: 492 IDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRL 551
Query: 328 RRAREATQVFREMIKRGCEPTMHTYIMLLQG-----------HLGKRGRK-GPDPLVNFD 375
+R EATQVF M+ G P + T +++ L +R K G P +
Sbjct: 552 QRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETC 611
Query: 376 TIFVGGLVKAGKSLDAAKYVERVMNRGVE 404
+GG K+G++ A K +E + G+E
Sbjct: 612 NTLIGGYCKSGRADLARKLLEEMTEAGLE 640
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 162/385 (42%), Gaps = 29/385 (7%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMV 128
F + FN +++ K++++D ++ L+ M + V N TF I + L + + +
Sbjct: 180 FTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQ 239
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW--IKPNEIAYGWLIKG 186
M GC ++ + V+ LC++ V +A Y + +L E PN + + LI G
Sbjct: 240 QLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDA-YELFQLMERRNCPPNVVTHNILIDG 298
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
C + EA ++++ M + G P I + +I+ K + DEA ++FQ + +
Sbjct: 299 LCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAA 358
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
TY + G+++ A + + +G D T +S+I R E ++V
Sbjct: 359 NAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELV 418
Query: 307 EEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH--- 359
EE+ P ++ ++ GL A Q+F M RGC Y ++++G
Sbjct: 419 EEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARA 478
Query: 360 -------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
+ KR RK +P + V L + G++ DA + + ++ RG
Sbjct: 479 SKHNKALAVLEQVIDKRDRK-FNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAA 537
Query: 407 RFDYNKFLHYYSN----EEGVVMFE 427
YN L S +E +FE
Sbjct: 538 VSSYNGLLSGLSRLQRWDEATQVFE 562
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 137/333 (41%), Gaps = 20/333 (6%)
Query: 100 MGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLV 159
M R + N T+ I + + +L + M G E + + ++K LC V
Sbjct: 1 MARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRV 60
Query: 160 VEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMI 219
VEA +++ P+ + Y L+ C G EA + M G P +I
Sbjct: 61 VEALEHFRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLI 120
Query: 220 ETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMC-KRGKISQAYTMLEEMFKRG 278
+ K +++A +V + + + M + + + +I +C K + A +L + +G
Sbjct: 121 DGLCKFGSEEQAFRVLEDVIQRGMGNSD-AAFETIIQRLCNKYNSVELASKVLGVVIAKG 179
Query: 279 IEADNLTLSSIIYGLLARGRLREAYKVVE-EIEK---PDISLYHGLIKGLLRLRRAREAT 334
L + +I G L AYK++E IEK P++ + LI GL + R EA
Sbjct: 180 FTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQ 239
Query: 335 QVFREMIKRGCEPTMHTYIMLLQGHLGKRG-------------RKGPDPLVNFDTIFVGG 381
Q+ +M+ GC P + TY ++ G L K+G R+ P V I + G
Sbjct: 240 QLLEKMVTGGCSPNVVTYSTVING-LCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDG 298
Query: 382 LVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
L KA + +A + R+ G YN +
Sbjct: 299 LCKAKRIEEARQLYHRMRETGCAPDIITYNSLI 331
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 78/155 (50%), Gaps = 5/155 (3%)
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
D F PS VD ++E+ ++ + D+A ++ M +R +S+Y ++ + + +
Sbjct: 496 DRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMS-ERGFAAAVSSYNGLLSGLSRLQRW 554
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGL 320
+A + E M G + T++ +I L + ++ +AY++V+ + K PDI + L
Sbjct: 555 DEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTL 614
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
I G + RA A ++ EM + G EP T+ +L
Sbjct: 615 IGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 649
>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Glycine max]
Length = 703
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/400 (21%), Positives = 181/400 (45%), Gaps = 24/400 (6%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNID---LFWETLQEMGRRRLVNDKTFKIAL 115
F ++ C + +T+N +V+ K++ + + +E +++ G R N T+ + +
Sbjct: 134 LFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCR-PNLVTYSVLI 192
Query: 116 MTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIK 174
+ E+ + + M G + + + + ++ C + + L + L +
Sbjct: 193 DCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVS 252
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
PN + Y L++G G EAS++ MT G P + + + K + +A+KV
Sbjct: 253 PNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKV 312
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
+M V++ ++ G TY +V++ +CK ++ A+ ++E M K+G + D +T ++++ GL
Sbjct: 313 LDLM-VQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLC 371
Query: 295 ARGRLREAYKVVEEI------EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
G++ EA + + + KPD+ + LI+GL + R +A ++ M++ G +
Sbjct: 372 GAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGN 431
Query: 349 MHTYIMLLQGHLGKRG------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVE 396
+ TY L++G+L R G P ++ + GL K A
Sbjct: 432 IVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFC 491
Query: 397 RVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREV 436
++ + G+ DYN + E+ + + +++R V
Sbjct: 492 KMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNV 531
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 129/300 (43%), Gaps = 55/300 (18%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
+S + P + L + + + A + +LMT GF ++ ++ +++ F + +
Sbjct: 69 VSALVLPRFTSLSALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQC 128
Query: 229 DEAMKVFQMM----------------------RVKRMDDL---------------GLSTY 251
D+AM +F M + KR+ + L TY
Sbjct: 129 DKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTY 188
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK 311
++ID CK G++ + +LEEM + G++AD SS+I G + ++ +E+ +
Sbjct: 189 SVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLR 248
Query: 312 ----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR-- 365
P++ Y L++GL R R REA+++ ++M RG P + Y +L G L K GR
Sbjct: 249 RKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADG-LCKNGRAG 307
Query: 366 -----------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
KG +P + V GL K + DA VE ++ +G + YN L
Sbjct: 308 DAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLL 367
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 81/175 (46%), Gaps = 5/175 (2%)
Query: 153 LCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSI 212
L RKL+ K + PN + Y +I G C + L A ++ M D G P++
Sbjct: 443 LAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTV 502
Query: 213 DVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLE 272
+ ++ + + + ++A +FQ MR ++ + ++ I+ID K G + A +L
Sbjct: 503 IDYNALMTSLCREDSLEQARSLFQEMR-NVNHNVDVVSFNIIIDGTLKAGDVKSAKELLS 561
Query: 273 EMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKG 323
EMF + D +T S +I G L EA + E++ P + ++ L+KG
Sbjct: 562 EMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKG 616
>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 148/315 (46%), Gaps = 38/315 (12%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
+S+ KP+ + LIKG+ + +L +A ++ ++ G +P + + MI F K N+
Sbjct: 89 VSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYG-DPDVYSYNAMISGFSKANQI 147
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
D A +VF MR + + TY I+I +C RGK+ A+ +++E+ K G + +T +
Sbjct: 148 DSANQVFDRMRSRGFSP-DVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTI 206
Query: 289 IIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+I + GR+ EA ++ +E+ +PD+ Y+ +I+G+ + A R + RG
Sbjct: 207 LIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARG 266
Query: 345 CEPTMHTYIMLLQGHLGKR----GRK--------GPDPLVNFDTIFVGGLVKAGKSLDAA 392
C P + +Y +LL+ L K G + G +P V +I + + G+ +A
Sbjct: 267 CNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAV 326
Query: 393 KYVERVMNRGVEVPRFDYNKFLHYYSNE-------------------EGVVMFEEVGKKL 433
+E + +G+ + Y+ + + E +V + + L
Sbjct: 327 NVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATL 386
Query: 434 REVGLADLA-DIFQR 447
+ G ADLA D+F++
Sbjct: 387 CKFGCADLALDVFEK 401
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 115/230 (50%), Gaps = 14/230 (6%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEA 196
GCE ++ + ++ + C+ V EA ++ + E + P+ +Y LI +C G L A
Sbjct: 301 GCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLA 360
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG----LSTYR 252
+ M +G P I + ++ T K D A+ VF+ ++D++G + Y
Sbjct: 361 IEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFE-----KLDEVGCPPTVRAYN 415
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
+ + G +A M+ EM ++GI+ D +T +S+I L G + EA ++ ++E
Sbjct: 416 TMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEAT 475
Query: 311 --KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+P + ++ ++ G+ + R E ++ M+++GC P +Y++L++G
Sbjct: 476 RFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEG 525
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/348 (20%), Positives = 150/348 (43%), Gaps = 36/348 (10%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIM 134
++N M+ K+ ID + M R D T+ I + +L +L+ F +M
Sbjct: 133 SYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELA---FEVM 189
Query: 135 NDC---GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
++ GC+ S+ +++ + EA L +L S ++P+ Y +I+G C
Sbjct: 190 DELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKE 249
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G A ++ G P + + ++ +F ++ ++ ++ + M + + + T
Sbjct: 250 GMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEP-NVVT 308
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
+ I+I C+ G++ +A +LE M ++G+ D+ + +I GRL A + +E++
Sbjct: 309 HSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMV 368
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK 366
PDI Y+ ++ L + A A VF ++ + GC PT+ Y
Sbjct: 369 SDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAY-------------- 414
Query: 367 GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
+T+F L G + A + + ++ +G++ YN +
Sbjct: 415 --------NTMF-SALWSCGNKIKALEMISEMIRKGIDPDEITYNSLI 453
>gi|359487106|ref|XP_002274114.2| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
mitochondrial-like [Vitis vinifera]
Length = 571
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 178/407 (43%), Gaps = 27/407 (6%)
Query: 30 LSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRN 89
+S + + H Q + + W+ FF + Q Q F H + T+N M+DI+GK
Sbjct: 169 ISPNSTSFDHSTVRQTLSCYANDWKRALEFFDWVQ-TQCGFNHTTDTYNGMIDILGKFFE 227
Query: 90 IDLFWETLQEMGRRRLV--NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLN 147
DL W +Q M + N TF+ A +++ +N ++ + N
Sbjct: 228 FDLIWVLIQRMKADPVAYPNHVTFRFVFKRYAAAHLVEEAMNAYYRTEEFNLRDETSYSN 287
Query: 148 KVVKTLCQRKLVVEAKYLILKLSEWIKPNEIA--YGWLIKGYCDVGDLIEASKIWNLMTD 205
++ LC+ K V+EA+ L LK S+ + N+ Y +++G+ +G + + W M
Sbjct: 288 -LIDALCEYKHVIEAEELFLKESKDLVFNDDVKIYNIILRGWFKMGWWKKCREFWEEMDR 346
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKIS 265
G S+ ++ K K A+K+++ M+ K + L + Y VI + +
Sbjct: 347 RGVCKSLYSYSIYMDIQCKSGKPWRAVKLYKEMKKKGI-RLDVVAYNTVIRAIGLSEGVD 405
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLI 321
+ + EM + G E + +T ++II L GR+REAY V +++ + P++ YH
Sbjct: 406 FSIRVFREMKEVGCEPNVVTYNTIIKLLCENGRIREAYGVFDQMREKGYAPNVITYHCFF 465
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ--GHLG----------KRGRKGPD 369
+ + ++ + F MI G P M TY+ML++ G G K +G
Sbjct: 466 GC---IEKPKQILRTFDRMINSGVRPRMDTYVMLMKKFGRWGFLRPVFIVWKKMEEQGCS 522
Query: 370 PLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEV-PRFDYNKFLH 415
P + LV+ G A KY E ++ +G+ PR D H
Sbjct: 523 PDACAYNALIDALVQKGMVDLARKYEEEMLAKGLSAKPRVDLGTKPH 569
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 49/244 (20%), Positives = 98/244 (40%), Gaps = 35/244 (14%)
Query: 202 LMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKR 261
+ T GF + D + MI+ K + D + Q M+ + T+R V
Sbjct: 202 VQTQCGFNHTTDTYNGMIDILGKFFEFDLIWVLIQRMKADPVAYPNHVTFRFVFKRYAAA 261
Query: 262 GKISQA---YTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP-----D 313
+ +A Y EE R D + S++I L + EA ++ + K D
Sbjct: 262 HLVEEAMNAYYRTEEFNLR----DETSYSNLIDALCEYKHVIEAEELFLKESKDLVFNDD 317
Query: 314 ISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVN 373
+ +Y+ +++G ++ ++ + + EM +RG ++++Y
Sbjct: 318 VKIYNIILRGWFKMGWWKKCREFWEEMDRRGVCKSLYSY--------------------- 356
Query: 374 FDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKL 433
+I++ K+GK A K + + +G+ + YN + EGV V +++
Sbjct: 357 --SIYMDIQCKSGKPWRAVKLYKEMKKKGIRLDVVAYNTVIRAIGLSEGVDFSIRVFREM 414
Query: 434 REVG 437
+EVG
Sbjct: 415 KEVG 418
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 170/390 (43%), Gaps = 24/390 (6%)
Query: 65 KAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRR-LVNDKTFKIALMTLAEVRE 123
K C ++I +N ++ K+++ ++ L EM + L T+ + L +
Sbjct: 37 KEMGCVPDDAI-YNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGR 95
Query: 124 LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGW 182
K V M D GC ++ N +V+ LC+ + + EAK ++ +++ P+ + Y
Sbjct: 96 TKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNS 155
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
IKG C + EA K M P + +I K D A ++ M R
Sbjct: 156 FIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSASRMLDQM-TNR 211
Query: 243 MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
+ TY +ID CK G++ +A +L+ M K G + + +S++ L G + +A
Sbjct: 212 GCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKA 271
Query: 303 YKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
++ E+E+ PD+ Y+ I GL + R ++A VF M++RGC P +Y ML++
Sbjct: 272 EDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEE 331
Query: 359 HLGKRGRKGPDPLVN------------FDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
K+ LV T+ + GL K G+ +A +V++ + P
Sbjct: 332 LCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEP 391
Query: 407 R-FDYNKFLHYYSNEEGVVMFEEVGKKLRE 435
F YN L + + ++ K++ E
Sbjct: 392 DVFFYNVMLDSHCKRRQIDKALQIHKQMLE 421
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 144/326 (44%), Gaps = 39/326 (11%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N + +N ++ + + +I + L EM RR D ++ + L + +KK F
Sbjct: 251 NMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVF 310
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIA-YGWLIKGYCDV 190
M + GC + + +V+ LC++K + +A L+ + E + +I Y L+ G C
Sbjct: 311 DRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKG 370
Query: 191 GDLIEASKIWNLMTDEGF-EPSIDVVDKMIETFFKINKDDEAMKVFQMM----------- 238
G EA +++ + DE EP + + M+++ K + D+A+++ + M
Sbjct: 371 GRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCCNVVTW 430
Query: 239 -----------RVKRMDDLGLS-----------TYRIVIDWMCKRGKISQAYTMLEEMFK 276
R+ + + L+ TY ++D MCK GK + A + EE K
Sbjct: 431 NILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVK 490
Query: 277 RGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQV 336
G D +T S++I GL+ EAY + K D++L++ +I G ++
Sbjct: 491 GGCVPDVVTYSALITGLVHENMAEEAYLL---FTKLDVALWNAMILGYAENGSGDLGLKL 547
Query: 337 FREMIKRGCEPTMHTYIMLLQGHLGK 362
F E+I+ EP T+ + G L K
Sbjct: 548 FVELIESDVEPNARTFGKEISGKLVK 573
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 112/253 (44%), Gaps = 31/253 (12%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
+ + +P+ + L++G C L +A ++ M + G P + + +I + K
Sbjct: 2 IDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDF 61
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
+A K M VK + TY ++D +CK G+ A +L+EM +G + T +
Sbjct: 62 GQAFKFLAEM-VKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120
Query: 289 IIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
I+ GL +L EA K++EE+ PD+ Y+ IKGL + R EA + M
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---- 176
Query: 345 CEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVE 404
P PD +V++ T+ + GL K+G A++ ++++ NRG
Sbjct: 177 --PVT------------------PD-VVSYTTV-INGLCKSGDLDSASRMLDQMTNRGCT 214
Query: 405 VPRFDYNKFLHYY 417
Y+ + +
Sbjct: 215 PDVVTYSSLIDGF 227
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 60/140 (42%), Gaps = 15/140 (10%)
Query: 311 KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH----------- 359
+PD + L++GL R + +A Q+ M + GC P Y L+ G+
Sbjct: 7 QPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFK 66
Query: 360 -LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYS 418
L + + P V T V GL KAG++ DA K ++ + ++G + YN +
Sbjct: 67 FLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLC 126
Query: 419 NEEGVVMFEEVGKKLREVGL 438
E +E K L E+ +
Sbjct: 127 EER---KLDEAKKMLEEMAV 143
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 175/368 (47%), Gaps = 32/368 (8%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMV 128
F ++++ N M+ + K I + +EM RRR+ VN TF + + L +V + +K
Sbjct: 190 FRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAG 249
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGY 187
+ M G S+ N ++ C+ + +A L+ ++ ++ I PNEI + LI G+
Sbjct: 250 DVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGF 309
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C ++ A K++ M +G +P++ + +I K DEA+ + +M +G
Sbjct: 310 CRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGL-----QDKMSGMG 364
Query: 248 LS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
L TY +I+ CK+ + +A ML+++ KRG+ + +T +++I GR+ +A+
Sbjct: 365 LKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAF 424
Query: 304 ----KVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
+++ P++S Y+ LI G R +EA ++ +EM G + + TY +L+
Sbjct: 425 LLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDA- 483
Query: 360 LGKRG----------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
L K+G +KG + + + G GK +A + + ++ +G+
Sbjct: 484 LCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGL 543
Query: 404 EVPRFDYN 411
R Y+
Sbjct: 544 IPNRTTYD 551
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 145/299 (48%), Gaps = 18/299 (6%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMV 128
F+ + IT+N ++D K+ + L+EM +R+ N+ TF I + +
Sbjct: 260 FSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAK 319
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGY 187
F M G + ++ N ++ LC + EA L K+S +KPN + Y LI G+
Sbjct: 320 KVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGF 379
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C L EA ++ + + G P++ + +I+ + K + D+A + MM D G
Sbjct: 380 CKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMML-----DTG 434
Query: 248 L----STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
+ STY +I C+ G + +A + +EM G++AD +T + ++ L +G R+A
Sbjct: 435 VCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAV 494
Query: 304 KVVEEI-------EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
++++E+ + +I Y+ LIKG + EA ++ EM+++G P TY +L
Sbjct: 495 RLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDIL 553
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 98/424 (23%), Positives = 171/424 (40%), Gaps = 77/424 (18%)
Query: 56 VYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRN-------IDLF-----------WETL 97
+ +F++TQK HN F R++ ++ ++N +D F + +L
Sbjct: 90 ILCYFKWTQKEFGAI-HNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNSTIFHSL 148
Query: 98 QEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQ-- 155
+G N + + + E+ + F D G S N ++ +L +
Sbjct: 149 SVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEG 208
Query: 156 RKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVV 215
R VVE+ Y + + I N + + +I G C VG +A + M GF PS+
Sbjct: 209 RIGVVESVYKEM-IRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSV--- 264
Query: 216 DKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMF 275
TY +ID CK GK+ +A +L+EM
Sbjct: 265 ---------------------------------ITYNTIIDGYCKAGKMFKADALLKEMV 291
Query: 276 KRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAR 331
+ I + +T + +I G + A KV EE+++ P++ Y+ LI GL +
Sbjct: 292 AKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLD 351
Query: 332 EATQVFREMIKRGCEPTMHTYIMLLQGHLGKR------------GRKGPDP-LVNFDTIF 378
EA + +M G +P + TY L+ G K+ G++G P ++ F+T+
Sbjct: 352 EALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTL- 410
Query: 379 VGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
+ KAG+ DA +++ GV YN + + E V ++ K++ GL
Sbjct: 411 IDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGL 470
Query: 439 -ADL 441
ADL
Sbjct: 471 KADL 474
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 126/290 (43%), Gaps = 32/290 (11%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
L W N I L+ Y G++ A + ++ D GF S + M+ + K +
Sbjct: 151 LGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRI 210
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
V++ M ++R + + T+ +VI+ +CK GK +A ++E+M G +T ++
Sbjct: 211 GVVESVYKEM-IRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNT 269
Query: 289 IIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
II G G++ +A +++E+ P+ ++ LI G R A +VF EM ++G
Sbjct: 270 IIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQG 329
Query: 345 CEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVE 404
+P + TY + L+N GL GK +A +++ G++
Sbjct: 330 LQPNVVTY----------------NSLIN-------GLCSNGKLDEALGLQDKMSGMGLK 366
Query: 405 VPRFDYNKFLHYYSN----EEGVVMFEEVGKKLREVGLADLADIFQRYGK 450
YN ++ + +E M +++GK+ + + YGK
Sbjct: 367 PNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGK 416
>gi|357442157|ref|XP_003591356.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480404|gb|AES61607.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 518
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 171/365 (46%), Gaps = 18/365 (4%)
Query: 2 PVDPGHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSW---RPVYL 58
P D H +V TIL SPE+ L SL S L++E Q+
Sbjct: 24 PNDDVH--KVYTILTTTS-SPET-LKQSLKSTQIFLSNELIDQVLKRVRFGHANPNQTLE 79
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRR--RLVNDKTFKIALM 116
FF+YT + + F H + + + M+ I+G+SR D WE L E R+ ++ +T + L
Sbjct: 80 FFRYTGRRK-GFYHTAYSLDTMLYILGRSRMFDHVWELLIEARRKDQNVITPRTVMVVLG 138
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPN 176
+A+V +++ V F +Y + N +++TLCQ K + +A+ + L +PN
Sbjct: 139 RVAKVCSVRQTVETFRKFKKIVPDYGVNCFNALLRTLCQEKSMTDARNVYHSLKHNFRPN 198
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
+ L+ G+ +V D A N M + G EP + + +++ + K + ++A KVF
Sbjct: 199 LQTFNILLSGWKNVED---AELFVNEMKEMGVEPDVVTYNSLVDVYCKGREIEKAYKVFD 255
Query: 237 MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR 296
MR K + + TY VI + G+ +A +L+EM + G+ D ++ I
Sbjct: 256 EMREKDLSP-DVITYTSVIGGLGLVGQPDKARDVLKEMKEYGVYPDVPAYNAAIRNYCIA 314
Query: 297 GRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
RL A+++V+E+ P+ + Y+ + + + +++ M+ GC P +
Sbjct: 315 KRLGIAFELVDEMVNKGLSPNATTYNLFFRVFYWSNDLQSSWNLYKRMMGEGCLPYTQSC 374
Query: 353 IMLLQ 357
+ L++
Sbjct: 375 MFLIR 379
>gi|15222997|ref|NP_172253.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180186|sp|Q9LQQ1.1|PPR20_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g07740, mitochondrial; Flags: Precursor
gi|8439893|gb|AAF75079.1|AC007583_15 It contains PPR repeats PF|01535 [Arabidopsis thaliana]
gi|14596021|gb|AAK68738.1| Unknown protein [Arabidopsis thaliana]
gi|31376389|gb|AAP49521.1| At1g07730 [Arabidopsis thaliana]
gi|51970836|dbj|BAD44110.1| hypothetical protein [Arabidopsis thaliana]
gi|332190050|gb|AEE28171.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 459
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 171/366 (46%), Gaps = 31/366 (8%)
Query: 58 LFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALM 116
LF QY + F H+ +++ ++ + KSRN D + L+ + R + + F +
Sbjct: 68 LFHQYQEMG---FRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQ 124
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKP 175
+ + K ++ FH + C +++ LN ++ L + +AK + ++P
Sbjct: 125 HYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRP 184
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
N +++ LIKG+ D D A K+++ M + +PS+ + +I + + +A +
Sbjct: 185 NSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLL 244
Query: 236 QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
+ M KR+ + T+ +++ +C +G+ ++A ++ +M RG + + ++ L
Sbjct: 245 EDMIKKRIRPNAV-TFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGK 303
Query: 296 RGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
RGR+ EA ++ E++K PD+ +Y+ L+ L R EA +V EM +GC+P T
Sbjct: 304 RGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAAT 363
Query: 352 YIMLLQGH----------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYV 395
Y M++ G L R P V V GL+K G +LD A +V
Sbjct: 364 YRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFV----CMVAGLIKGG-NLDHACFV 418
Query: 396 ERVMNR 401
VM +
Sbjct: 419 LEVMGK 424
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 105/268 (39%), Gaps = 49/268 (18%)
Query: 31 SSCNFNLTHEFFLQICNNFPLSWRPVYLFFQ--YTQKAQPCFAHNSITFNRMVDIIGKSR 88
+S +FN+ + FL C+ W F + QP + +T+N ++ + ++
Sbjct: 185 NSVSFNILIKGFLDKCD-----WEAACKVFDEMLEMEVQP----SVVTYNSLIGFLCRND 235
Query: 89 NIDLFWETLQEMGRRRL-VNDKTFKIALMTL---AEVRELKKM-------------VNFF 131
++ L++M ++R+ N TF + + L E E KK+ VN+
Sbjct: 236 DMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYG 295
Query: 132 HIMNDCGCEYSLE-------------------MLNKVVKTLCQRKLVVEAKYLILKLS-E 171
+M+D G ++ + N +V LC V EA ++ ++ +
Sbjct: 296 ILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMK 355
Query: 172 WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEA 231
KPN Y +I G+C + D + N M P+ M+ K D A
Sbjct: 356 GCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHA 415
Query: 232 MKVFQMMRVKRMDDLGLSTYRIVIDWMC 259
V ++M K + G ++ ++ +C
Sbjct: 416 CFVLEVMGKKNL-SFGSGAWQNLLSDLC 442
>gi|225425882|ref|XP_002266563.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial [Vitis vinifera]
Length = 496
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/457 (22%), Positives = 199/457 (43%), Gaps = 60/457 (13%)
Query: 36 NLTHEFFLQICNNFPLS--------------WRPVYLFFQYTQKAQPCFAHNSITFNRMV 81
+L H+ + CN P+S W+ F++ + ++ + H ++ MV
Sbjct: 64 SLVHD---EACNAIPMSQNLVDVLLHRFKDDWKSALGLFRWAE-SRLGYEHAPEAYDMMV 119
Query: 82 DIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEY 141
DI+GK + +D ++EM + LV T A+ LA E + V F + + E
Sbjct: 120 DILGKLKQVDKMRALMEEMRQGNLVRLSTVAKAMRRLAGAGEWEDAVRVFDDLGNFELEK 179
Query: 142 SLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWN 201
+ E +N ++ TLC+ + V +A+ + L+L I PN + I G+C + EA
Sbjct: 180 NTESMNLLLDTLCKERKVEQARAIFLELKPHISPNTHTFNIFIHGWCKANRVDEAEWTIQ 239
Query: 202 LMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKR 261
M G P + +I+++ + + + ++ M+ + + TY ++ + K
Sbjct: 240 EMKGHGCRPCVISYSTIIQSYCRQSNFRKVYELLDDMQAQGCAP-NVVTYTTIMCSLTKV 298
Query: 262 GKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE-EIEK----PDISL 316
+ +A + E M G + D L +++I+ L G+LREA +V E E+ K P+ S
Sbjct: 299 EQFEEALQIAERMRSVGCKPDTLFYNALIHTLGRAGQLREAVRVFEVEMPKTGVPPNTST 358
Query: 317 YHGLIKGLLRLRRAREATQVFREMIKRG-CEPTMHTYIMLLQGHLGKRGRKGPDPLVNF- 374
Y+ +I + ++A + RE+ C+P + TY +L+ K G+ D L NF
Sbjct: 359 YNSMIAMFCHHSQEQKALNLLREIENSTFCKPDIQTYYPVLKSCF-KTGK--IDSLSNFL 415
Query: 375 ---------------DTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN 419
T+ + GL +A K E ++ + + PR+
Sbjct: 416 DDMVNKHHLSLDVSAYTLLIHGLCRANKCEWGYNLFEEMVGKAI-TPRY----------- 463
Query: 420 EEGVVMFEEVGKKLREVGLADLADIFQRYGKKMATRE 456
+ ++ +E+ +K + D A+ + + K+M T E
Sbjct: 464 KTCALLLDEIKQK----NMHDAAERIEVFMKQMKTSE 496
>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 137/301 (45%), Gaps = 21/301 (6%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
N +T+N ++ + +D L+ M + + ND T+ + L + R V
Sbjct: 291 NEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLL 350
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
M + G + + + ++ L + EA L K++E KPN + Y L+ G C
Sbjct: 351 SSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCRE 410
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS- 249
G EA +I N M G P+ +++ FFK +EA++V+ K MD G S
Sbjct: 411 GKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVW-----KEMDKTGCSR 465
Query: 250 ---TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
Y ++ID +C G++ +A + +M GI+ D + SSII GL G + A K+
Sbjct: 466 NKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLY 525
Query: 307 EEI-------EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP---TMHTYIMLL 356
E+ +PD+ Y+ L+ GL + A + M+ RGC+P T +T++ L
Sbjct: 526 HEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTL 585
Query: 357 Q 357
Sbjct: 586 S 586
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 180/390 (46%), Gaps = 30/390 (7%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMG-RRRLVNDKTFKIALMTLAEVRELKKMV 128
F T + M++ S + D + L + R++ +++F + + K V
Sbjct: 73 FKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAV 132
Query: 129 NFFHIMND-CGCEYSLEMLNKVVKTLCQRKLVVEA----KYLI-LKLSEWIKPNEIAYGW 182
+ FH M D C+ S++ N V+ + L Y++ ++ I PN +++
Sbjct: 133 DLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNL 192
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
+IK C + + A +++ M + P +++ K + DEA+ + M+ +
Sbjct: 193 VIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEG 252
Query: 243 MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
+ Y ++ID +CK+G +++ +++ MF +G + +T +++I+GL +G+L +A
Sbjct: 253 CSPSPV-IYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKA 311
Query: 303 YKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
++E + P+ Y LI GL++ RRA +A ++ M +RG H Y +L+ G
Sbjct: 312 VSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISG 371
Query: 359 HLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEV 405
L K G+ KG P + ++ V GL + GK +A + + R++ G
Sbjct: 372 -LFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLP 430
Query: 406 PRFDYNKFLHYYSN----EEGVVMFEEVGK 431
+ Y+ + + EE V +++E+ K
Sbjct: 431 NAYTYSSLMKGFFKTGLCEEAVQVWKEMDK 460
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/407 (22%), Positives = 165/407 (40%), Gaps = 61/407 (14%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMV 128
+ N ++FN ++ + K R +D E + M R+ + D LM L + + + V
Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAV 242
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGY 187
M GC S + N ++ LC++ + L+ + + PNE+ Y LI G
Sbjct: 243 LLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGL 302
Query: 188 CDVGDL-----------------------------------IEASKIWNLMTDEGFEPSI 212
C G L +A ++ + M + G+ +
Sbjct: 303 CLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQ 362
Query: 213 DVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLE 272
+ +I FK K +EAM +++ M K + Y +++D +C+ GK ++A +L
Sbjct: 363 HIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKP-NIVVYSVLVDGLCREGKPNEAKEILN 421
Query: 273 EMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDIS----LYHGLIKGLLRLR 328
M G + T SS++ G G EA +V +E++K S Y LI GL +
Sbjct: 422 RMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVG 481
Query: 329 RAREATQVFREMIKRGCEPTMHTYIMLLQGHLG-----------------KRGRKGPDPL 371
R +EA V+ +M+ G +P Y +++G G + + PD +
Sbjct: 482 RVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPD-V 540
Query: 372 VNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYS 418
V ++ I + GL A + +++RG + N FL+ S
Sbjct: 541 VTYN-ILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLS 586
>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 867
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 140/326 (42%), Gaps = 43/326 (13%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+TFN ++D + K + E + + D ++ I L A M N FH
Sbjct: 378 VTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHS 437
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLIL-------------------------- 167
M D G N ++ +R ++ EA +
Sbjct: 438 MTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGR 497
Query: 168 ------KLSEWI----KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGF-EPSIDVVD 216
KLS+ I KPN + Y LI+G+C GDLI+A ++ + M D+G P+I
Sbjct: 498 LADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFS 557
Query: 217 KMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFK 276
+I + + A VF ++ + D + T+ +ID C GK+ +A+ +L+ M
Sbjct: 558 SIIHSLCNEGRVMNAQDVFNLV-IHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVS 616
Query: 277 RGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRARE 332
G E D +T S++I G GR+ + + E+ KP Y ++ GL R R
Sbjct: 617 AGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSA 676
Query: 333 ATQVFREMIKRGCEPTMHTYIMLLQG 358
A ++F EMI+ G ++ TY ++LQG
Sbjct: 677 AKKMFHEMIESGTAMSISTYTIILQG 702
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 171/386 (44%), Gaps = 44/386 (11%)
Query: 58 LFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALM- 116
LF + QK N +T+N +V + K+R +D L++M + D+ A++
Sbjct: 294 LFNEMVQKG---VVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIH 350
Query: 117 ---TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEW 172
L +E KM F M G + N ++ +LC+ K EA + + ++
Sbjct: 351 GYSCLGRWKEAAKM---FKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKG 407
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
KP+ I+Y L+ GY G ++ + +++ MTD G + +I K DEA+
Sbjct: 408 HKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEAL 467
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
+F MR + + + TY VI +C+ G+++ A L +M G++ + + S+I G
Sbjct: 468 LIFTEMRGQGVSP-NVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQG 526
Query: 293 LLARGRLREAYKVVEE-----IEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
G L +A ++V E I +P+I+ + +I L R A VF +I G P
Sbjct: 527 FCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRP 586
Query: 348 TMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPR 407
+ T+ L+ G+ VG + KA LDA +++ G E
Sbjct: 587 DIFTFNSLIDGY-----------------CLVGKMDKAFGVLDA------MVSAGTEPDV 623
Query: 408 FDYNKFLHYYSN----EEGVVMFEEV 429
Y+ ++ Y ++G+++F E+
Sbjct: 624 VTYSTLINGYFKSGRIDDGLILFREM 649
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 144/329 (43%), Gaps = 32/329 (9%)
Query: 123 ELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYG 181
E+ K N F+ M G ++ N +V LC+ + + +A+ ++ ++ I+P+E+ Y
Sbjct: 287 EISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYT 346
Query: 182 WLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK 241
+I GY +G EA+K++ MT EG P I + ++++ K + EA ++F + K
Sbjct: 347 AMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATK 406
Query: 242 RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
+ +Y I++ G+ + M GI AD+ + +I RG + E
Sbjct: 407 GHKP-DIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDE 465
Query: 302 AYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
A + E+ P++ Y +I L R+ R +A + +MI G +P Y L+Q
Sbjct: 466 ALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQ 525
Query: 358 GHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFD-YNKFLHY 416
G G + A + V +M++G+ P ++ +H
Sbjct: 526 -----------------------GFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHS 562
Query: 417 YSNEEGVVMFEEVGKKLREVGLADLADIF 445
NE V+ ++V + +G D DIF
Sbjct: 563 LCNEGRVMNAQDVFNLVIHIG--DRPDIF 589
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 134/294 (45%), Gaps = 48/294 (16%)
Query: 76 TFNRMVDIIGKSRNIDL---FWETLQEMG-RRRLVNDKTFKIALMTLAEVRELKKMVNFF 131
T+ ++D ++R DL F+ L G R + TF L E M+
Sbjct: 167 TYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSML--L 224
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS--EWIKPNEIAYGWLIKGYCD 189
H M++ GC N V+K+LC EA ++L+++ + P+ ++Y +I G
Sbjct: 225 HRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFM 284
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
G++ +A ++N M +G P++
Sbjct: 285 EGEISKACNLFNEMVQKGVVPNV------------------------------------V 308
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
TY ++ +CK + +A +L +MF I+ D +T +++I+G GR +EA K+ +E+
Sbjct: 309 TYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEM 368
Query: 310 EK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
+ PDI ++ L+ L + +R++EA ++F + +G +P + +Y +LL G+
Sbjct: 369 TREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGY 422
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 108/222 (48%), Gaps = 10/222 (4%)
Query: 142 SLEMLNKVVKTLCQRKLVVEAK---YLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASK 198
++ + ++ +LC V+ A+ L++ + + +P+ + LI GYC VG + +A
Sbjct: 552 NITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGD--RPDIFTFNSLIDGYCLVGKMDKAFG 609
Query: 199 IWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWM 258
+ + M G EP + +I +FK + D+ + +F+ M KR+ + TY +V+D +
Sbjct: 610 VLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTV-TYSLVLDGL 668
Query: 259 CKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDI 314
+ G+ S A M EM + G T + I+ GL EA + ++ K +I
Sbjct: 669 FRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEI 728
Query: 315 SLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
++ + +I L +++R EA +F + G P TY +++
Sbjct: 729 AILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMI 770
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/335 (20%), Positives = 145/335 (43%), Gaps = 41/335 (12%)
Query: 119 AEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEI 178
A R + V+ + I+ DC C R+ + + L ++ + I
Sbjct: 156 AGPRVVPLTVHTYGILMDCCCR--------------ARRPDLGPAFFARLLRAGLRTDGI 201
Query: 179 AYGWLIKGYCDVGDLIEA-SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQM 237
+K C EA S + + M++ G P + +I++ ++ EA+ + +
Sbjct: 202 VTNTFLKCLCYAKRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDM--L 259
Query: 238 MRVKRMDDLG--LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
+R+ + D + +Y +VI + G+IS+A + EM ++G+ + +T +SI++ L
Sbjct: 260 LRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCK 319
Query: 296 RGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
+ +A V+ ++ +PD Y +I G L R +EA ++F+EM + G P + T
Sbjct: 320 ARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVT 379
Query: 352 YIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERV 398
+ L+ L K R KG P + +I + G G+ +D +
Sbjct: 380 FNSLMDS-LCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSM 438
Query: 399 MNRGVEVPRFDYNKFLHYYSN----EEGVVMFEEV 429
+ G+ +N ++ ++ +E +++F E+
Sbjct: 439 TDNGIVADSHCFNILINAHAKRGMMDEALLIFTEM 473
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 86/208 (41%), Gaps = 37/208 (17%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
L + +KP + Y ++ G G A K+++ M + G SI +++ + N
Sbjct: 650 LCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCT 709
Query: 229 DEAMKVFQ--------------------MMRVKRMDDL----------GL----STYRIV 254
DEA+ +F + +VKR ++ GL STY ++
Sbjct: 710 DEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVM 769
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDI 314
I + K G + +A M M K G + L+ II LL +G + +A + +++ I
Sbjct: 770 IINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKAGYYMSKVDGTII 829
Query: 315 SLYHGLIKGLLRLRRAREATQVFREMIK 342
SL L+ L ++ +RE IK
Sbjct: 830 SLEASTTSLLISLFASKGR---YREQIK 854
>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
Length = 745
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 159/348 (45%), Gaps = 22/348 (6%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T+ I + + EL+ V M G E + + VV LC + + +A ++ +
Sbjct: 293 TYGILIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDM 352
Query: 170 SEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
+ + +E Y ++ G+C+ GDL+ A + ++ M +G MI + +
Sbjct: 353 VQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVEL 412
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
+EA K+ Q M +R+D + TY ++ID CKRGK+++A+ M M +RG+ + +T ++
Sbjct: 413 EEAEKLLQEMWARRLD-VDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTA 471
Query: 289 IIYGLLARGRLREAYKVVEEIEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRG 344
+ GL +G ++ A +++ E+ + L Y+ LI GL + +A + +M
Sbjct: 472 LTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTAC 531
Query: 345 CEPTMHTYIMLLQGHLGKRG-------------RKGPDPLVNFDTIFVGGLVKAGKSLDA 391
+P ++TY L+ L K G KG P + + + G +G+
Sbjct: 532 LKPDVYTYTTLIDA-LCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGG 590
Query: 392 AKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEV--GKKLREVG 437
K ++ ++ + + YN + Y E + E+ G + R+VG
Sbjct: 591 KKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVG 638
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 128/281 (45%), Gaps = 35/281 (12%)
Query: 139 CEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASK 198
C Y N ++K LC V +A+ L +++ P+ + YG LI G+C +G+L A K
Sbjct: 260 CSY-----NILLKALCDAGRVKDARQLFDEMAS--APDVVTYGILIHGHCALGELENAVK 312
Query: 199 IWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWM 258
+ + M G EP+ V ++ +A++V + M V+R L + Y V+
Sbjct: 313 LLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDM-VQRKVILDEALYTTVLSGF 371
Query: 259 CKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI--EKPDIS- 315
C +G + A +EM ++G+ D +T +++I GL L EA K+++E+ + D+
Sbjct: 372 CNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDE 431
Query: 316 -LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNF 374
Y LI G + + EA Q+ M++RG P + TY
Sbjct: 432 VTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTY---------------------- 469
Query: 375 DTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
T GL K G A + + + N+G+E+ YN ++
Sbjct: 470 -TALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLIN 509
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/385 (20%), Positives = 168/385 (43%), Gaps = 65/385 (16%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMV 128
A + +T+ M++ + ++ ++ + LQEM RRL V++ T+ +
Sbjct: 392 LATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTV--------------- 436
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGY 187
++ C+R + EA + + + + PN + Y L G
Sbjct: 437 --------------------LIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGL 476
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C GD+ A+++ + M+++G E + + +I K ++AM+ M +
Sbjct: 477 CKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKP-D 535
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
+ TY +ID +CK G + +A+++L+EM +GI+ +T + ++ G GR+ K+++
Sbjct: 536 VYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLD 595
Query: 308 -EIEK---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
+EK P+ + Y+ L+K + T++++ M R P +TY +L++GH R
Sbjct: 596 WMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKAR 655
Query: 364 GRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGV 423
K +A + + ++ +G + Y+ + + ++
Sbjct: 656 NMK-----------------------EALYFHDEMIQKGFRLTATSYSALIRLLNKKKKF 692
Query: 424 VMFEEVGKKLREVGLADLADIFQRY 448
V E+ +R+ GL +D++ Y
Sbjct: 693 VEARELFHDMRKEGLTAESDVYDFY 717
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 70/160 (43%), Gaps = 15/160 (9%)
Query: 292 GLLARGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
+L+R L EA ++ +E+ ++ Y+ L+K L R ++A Q+F EM P + T
Sbjct: 237 AVLSRLPLDEAIELFQELPHKNVCSYNILLKALCDAGRVKDARQLFDEM---ASAPDVVT 293
Query: 352 YIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVM 399
Y +L+ GH L + G +P T V L G DA + VE ++
Sbjct: 294 YGILIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMV 353
Query: 400 NRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLA 439
R V + Y L + N+ +V +++ GLA
Sbjct: 354 QRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLA 393
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 74/182 (40%), Gaps = 20/182 (10%)
Query: 69 CFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTL---------- 118
C + T+ ++D + KS ++D LQEM DK K ++T
Sbjct: 531 CLKPDVYTYTTLIDALCKSGDLDRAHSLLQEM------LDKGIKPTIVTYNVLMNGFCMS 584
Query: 119 AEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNE 177
V KK++++ M + + N ++K C + + + S + PNE
Sbjct: 585 GRVEGGKKLLDW---MLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNE 641
Query: 178 IAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQM 237
Y LIKG+C ++ EA + M +GF + +I K K EA ++F
Sbjct: 642 NTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHD 701
Query: 238 MR 239
MR
Sbjct: 702 MR 703
>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 154/296 (52%), Gaps = 8/296 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHI 133
I + ++D K + + ++ EM +++ N TF + V +LK+ V +
Sbjct: 195 IMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNE 254
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDVGD 192
M+ ++ N ++ LC+ V +A L + + + ++PN + Y L+ GY V +
Sbjct: 255 MSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKE 314
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ +A ++N ++ G P++ MI K DEA+K+F+ M +K M TY
Sbjct: 315 VNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTP-NTVTYS 373
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
+ID +CK G+IS + +++E+ RG A+ +T +S++ GL ++ +A ++ +++
Sbjct: 374 SLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDE 433
Query: 311 --KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
+PD+S Y L+ GL + R ++A +++++++ +G + Y +++ G L K G
Sbjct: 434 GIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMING-LCKEG 488
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 115/276 (41%), Gaps = 64/276 (23%)
Query: 145 MLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLM 203
M ++ + C+ KLV++A L ++ + I PN + + LI G+C VG L EA + N M
Sbjct: 196 MYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEM 255
Query: 204 TDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGK 263
+ P++ T+ I+ID +CK G+
Sbjct: 256 SLNNVNPNV------------------------------------YTFNILIDGLCKEGE 279
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHG 319
+ +A ++L M K+G+E + +T +S++ G + +A V I P++ Y
Sbjct: 280 VKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSV 339
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFV 379
+I GL + + EA ++F+EM + P TY L +
Sbjct: 340 MINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSL-----------------------I 376
Query: 380 GGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
GL K+G+ D ++ + NRG YN L+
Sbjct: 377 DGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLN 412
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 130/301 (43%), Gaps = 22/301 (7%)
Query: 111 FKIALMTLAEVRELKKMVNFFHIMNDCGCE---YSLEMLNKVVKTLCQRKLVVEAKYLIL 167
F L +L ++ K ++F M G + ++ +L LCQ IL
Sbjct: 56 FNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSMVAKIL 115
Query: 168 KLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINK 227
KL +P+ + L++G C G + EA + + + F +I K +
Sbjct: 116 KLG--YQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGE 173
Query: 228 DDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLS 287
A+++ + + + + Y +ID CK + AY + EM + I + +T +
Sbjct: 174 TRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFN 233
Query: 288 SIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
S+IYG G+L+EA ++ E+ P++ ++ LI GL + ++AT V MIK+
Sbjct: 234 SLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQ 293
Query: 344 GCEPTMHTYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDA 391
G EP + TY L+ G+ +G P V+ ++ + GL K K +D
Sbjct: 294 GVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCK-NKMVDE 352
Query: 392 A 392
A
Sbjct: 353 A 353
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 134/280 (47%), Gaps = 13/280 (4%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVNFF 131
N TFN ++D + K + L M ++ + + +LM V+E+ K + F
Sbjct: 263 NVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVF 322
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDV 190
+ ++ G ++ + ++ LC+ K+V EA L ++ + + PN + Y LI G C
Sbjct: 323 NTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKS 382
Query: 191 GDLIEASKIWNLM---TDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
G + S +W+L+ + G +I + ++ K ++ D+A+ + M+ + +
Sbjct: 383 GRI---SDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQP-D 438
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
+STY ++D +CK G++ A + +++ +G + + +I GL G EA ++
Sbjct: 439 MSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLS 498
Query: 308 EIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
++E PD Y LI L + + +A ++ REMI R
Sbjct: 499 QMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREMIAR 538
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 80/177 (45%), Gaps = 2/177 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRR-RLVNDKTFKIALMTLAEVRELKKMVNFF 131
N++T++ ++D + KS I W+ + E+ R + N T+ L L + ++ K +
Sbjct: 368 NTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALL 427
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEI-AYGWLIKGYCDV 190
M D G + + +V LC+ + +A+ + L P I Y +I G C
Sbjct: 428 TKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKE 487
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
G EA + + M D G P + +I FK NK+ +A+K+ + M + D G
Sbjct: 488 GFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREMIARESDCSG 544
>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 504
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 165/348 (47%), Gaps = 29/348 (8%)
Query: 89 NIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNK 148
++DLF+ +Q R L + F L ++++++ ++ + M G ++L N
Sbjct: 65 SLDLFFHMVQ---CRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 149 VVKTLCQ-RKLVVEAKYL--ILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
++ C+ +L + +L ++KL +P+ + +G L+ G+C + +A +++ M +
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMMKLGH--EPDIVTFGSLLNGFCRGDRIYDALYMFDRMVE 179
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK--RMDDLGLSTYRIVIDWMCKRGK 263
G+EP++ + + +I+ K + D A+ + M V R D + TY +I +C G+
Sbjct: 180 MGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAV---TYNSLISGLCNSGR 236
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHG 319
A M+ M KR I D T +++I + GR+ EA ++ EE+ + PDI Y
Sbjct: 237 WDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSL 296
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL-GKRGRKGPDPLVNFD--- 375
LI GL R EA Q+F M+ +GC P + TY +L+ G+ K+ G
Sbjct: 297 LIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRG 356
Query: 376 --------TIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
T+ + G +AGK A + + ++ GV YN LH
Sbjct: 357 VVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLH 404
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 141/311 (45%), Gaps = 16/311 (5%)
Query: 58 LFFQYTQ-KAQPCFAHNSITFNRMVDIIGKSRNIDL---FWETLQEMGRRRLVNDKTFKI 113
LFF Q + P A F+R++ I K + D+ WE +Q +G N T I
Sbjct: 68 LFFHMVQCRPLPSIAD----FSRLLSAISKMKKYDVVIYLWEQMQMLGIPH--NLCTCNI 121
Query: 114 ALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW- 172
L +L ++F M G E + ++ C+ + +A Y+ ++ E
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMG 181
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
+PN + Y +I G C + A + N M +G P + +I + D+A
Sbjct: 182 YEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDAT 241
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
++ M KR + T+ +ID K G+IS+A + EEM +R ++ D +T S +IYG
Sbjct: 242 RMVSCM-TKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYG 300
Query: 293 LLARGRLREAYK----VVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
L RL EA + +V + PD+ Y LI G + ++ ++F EM +RG
Sbjct: 301 LCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360
Query: 349 MHTYIMLLQGH 359
TY +L+QG+
Sbjct: 361 TVTYTVLIQGY 371
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 116/279 (41%), Gaps = 42/279 (15%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHIM 134
TFN ++D K I E +EM RR L D T+ + + L L + F M
Sbjct: 258 TFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFM 317
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDL 193
GC + + ++ C+ K V L ++S+ + N + Y LI+GYC G L
Sbjct: 318 VSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKL 377
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
A +I+ M G P+I TY +
Sbjct: 378 NVAEEIFKWMVFCGVPPNI------------------------------------ITYNV 401
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE--- 310
++ +C GKI +A +L +M K G++AD +T + II G+ G + +A+ + +
Sbjct: 402 LLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKG 461
Query: 311 -KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
PDI Y ++ GL + EA +FR+M + G P
Sbjct: 462 LTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPN 500
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 145/332 (43%), Gaps = 8/332 (2%)
Query: 42 FLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMG 101
F + N F R + + + + + N + +N ++D + KS+ +D + L M
Sbjct: 154 FGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRME 213
Query: 102 RRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVV 160
+ D T+ + L M + N ++ + +
Sbjct: 214 VDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRIS 273
Query: 161 EAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMI 219
EA+ L ++ + P+ + Y LI G C L EA +++ M +G P + +I
Sbjct: 274 EAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILI 333
Query: 220 ETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGI 279
+ K K + MK+F M +R TY ++I C+ GK++ A + + M G+
Sbjct: 334 NGYCKSKKVEHGMKLFCEMS-QRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGV 392
Query: 280 EADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQ 335
+ +T + +++GL G++ +A ++ +++K DI Y+ +I+G+ + +A
Sbjct: 393 PPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWD 452
Query: 336 VFREMIKRGCEPTMHTYIMLLQGHLGKRGRKG 367
++ + +G P + TY ++ G L K+G +G
Sbjct: 453 LYCSLNLKGLTPDIWTYTAMMLG-LYKKGLRG 483
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/422 (24%), Positives = 183/422 (43%), Gaps = 73/422 (17%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV--NDKTFKIALMTLA 119
+ + + C + TFN++V + K + L E L + +R V N TF I + L
Sbjct: 283 FDEMLECCLCPDVTTFNKLVHALCK-KGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLC 341
Query: 120 EVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEI 178
+ L + V ++ G + N V+ LC++ VVEA+ + K+ + +PN+
Sbjct: 342 KEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDF 401
Query: 179 AYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
Y +I GYC G +++A++I +GF+P ++ F + D+AM VF+
Sbjct: 402 TYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFK-- 459
Query: 239 RVKRMDDLG------LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
D LG + Y +I +C++G I A ++ EM ++G + D T + II G
Sbjct: 460 -----DGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIING 514
Query: 293 LLARGRLREAYKVV-EEIEK--------------------------------------PD 313
L G L +A ++ + I K PD
Sbjct: 515 LCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPD 574
Query: 314 ISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG------------HLG 361
+ Y+ L+ GL + ++ E ++F+ M ++GC P + TY +++ LG
Sbjct: 575 VITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLG 634
Query: 362 KRGRKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRF--DYNKFLHYYS 418
+ KG P +V+F T+ + G K G LD A + R M + +V YN + +S
Sbjct: 635 EMKSKGLTPDVVSFGTL-ITGFCKVG-DLDGAYGLFRGMEKQYDVSHTTATYNIIISAFS 692
Query: 419 NE 420
+
Sbjct: 693 EQ 694
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 126/266 (47%), Gaps = 9/266 (3%)
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLIL-KLSEWIKPNEIAYGWLIKGYCDVGD 192
M + GC+ + N ++ LC+ + +A +LI +++ P+ Y L+ GYC
Sbjct: 496 MAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLK 555
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
L A ++ N M +G P + + ++ K K +E M++F+ M K + TY
Sbjct: 556 LDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAP-NIITYN 614
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP 312
+I+ +C K+++A +L EM +G+ D ++ ++I G G L AY + +EK
Sbjct: 615 TIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQ 674
Query: 313 -DIS----LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL--GKRGR 365
D+S Y+ +I + A ++F EM K GC+P +TY +L+ G G +
Sbjct: 675 YDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQ 734
Query: 366 KGPDPLVNFDTIFVGGLVKAGKSLDA 391
L N + F+ L G+ L+
Sbjct: 735 GYKFLLENIEKGFIPSLTTFGRVLNC 760
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 120/247 (48%), Gaps = 14/247 (5%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIM 134
T+N +VD + +D E + M + + D T+ L L + + ++++ F M
Sbjct: 542 TYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAM 601
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDL 193
+ GC ++ N ++++LC K V EA L+ ++ S+ + P+ +++G LI G+C VGDL
Sbjct: 602 TEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDL 661
Query: 194 IEASKIWNLMTDEGFEPSIDVV------DKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
A ++ G E DV + +I F + A+++F M+ K D
Sbjct: 662 DGAYGLF-----RGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMK-KNGCDPD 715
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
TYR++ID CK G ++Q Y L E ++G T ++ L +++EA ++
Sbjct: 716 NYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIH 775
Query: 308 EIEKPDI 314
+ + DI
Sbjct: 776 LMVQKDI 782
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 118/252 (46%), Gaps = 17/252 (6%)
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
N +AY ++ G+ + GD A ++++ M + P + +K++ K E+ ++F
Sbjct: 259 NAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLF 318
Query: 236 QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
+ +KR L T+ I I +CK G + +A +L + + G+ D +T +++I GL
Sbjct: 319 DKV-LKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCR 377
Query: 296 RGRLREA----YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
+ R+ EA +K+V +P+ Y+ +I G + +A ++ ++ + +G +P T
Sbjct: 378 KSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFT 437
Query: 352 YIMLLQG-----------HLGKRG-RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVM 399
Y L+ G + K G KG P + + GL + G L A + + +
Sbjct: 438 YCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMA 497
Query: 400 NRGVEVPRFDYN 411
+G + + YN
Sbjct: 498 EKGCKPDIWTYN 509
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 121/251 (48%), Gaps = 19/251 (7%)
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G + EA + M +PS+ + ++ + ++A KV+ M+ K+++ + T
Sbjct: 169 GKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVES-DVYT 227
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG---RLREAY-KVV 306
Y I I C+ G+ A +L M G ++ + +++ G G R RE + +++
Sbjct: 228 YTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEML 287
Query: 307 EEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG-------- 358
E PD++ ++ L+ L + E+ ++F +++KRG P + T+ + +QG
Sbjct: 288 ECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLD 347
Query: 359 ----HLGKRGRKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
LG R+G P +V ++T+ + GL + + ++A + + +++N G E F YN
Sbjct: 348 RAVRLLGCVSREGLRPDVVTYNTV-ICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSI 406
Query: 414 LHYYSNEEGVV 424
+ Y + VV
Sbjct: 407 IDGYCKKGMVV 417
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 168/367 (45%), Gaps = 34/367 (9%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
N +T++ ++ + K++ +D E L M + ++ N +T+ + + K+ + F
Sbjct: 233 NVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFL 292
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
M+ G E + N ++ LC+ EA+ + +++ +KP YG L++GY
Sbjct: 293 KKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATK 352
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G L+E + +LM G P+ V +I + K K D+AM VF MR + ++ T
Sbjct: 353 GALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNP-DTVT 411
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y VI +CK G++ A E+M + N+ +S+I+ L + +A +++ E+
Sbjct: 412 YGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEML 471
Query: 311 KPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK 366
I L ++ +I + R E+ ++F M++ G +P + TY L+ G+
Sbjct: 472 DRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGY------- 524
Query: 367 GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN----EEG 422
AGK +A K + +++ G++ YN ++ Y E+
Sbjct: 525 ----------------CLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568
Query: 423 VVMFEEV 429
+V+F E+
Sbjct: 569 LVLFREM 575
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 137/302 (45%), Gaps = 22/302 (7%)
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW---IKPNEIAYGWLIKGYCDV 190
M GC ++ N ++K LC EA L+ + + P+ ++Y +I G+
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
GDL +A ++ M D G P++ +I K D+AM+V M VK T
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSM-VKNGVMPNCRT 271
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y ++ C G+ +A L++M G+E D +T +S++ L GR EA K+ + +
Sbjct: 272 YNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMT 331
Query: 311 ----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK 366
KP+I+ Y L++G E + M++ G P + + +L+ + K+G+
Sbjct: 332 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAY-AKQGKV 390
Query: 367 GPDPLV---------NFDTI----FVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
LV N DT+ +G L K+G+ DA +Y E++++ + YN
Sbjct: 391 DQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSL 450
Query: 414 LH 415
+H
Sbjct: 451 IH 452
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 118/258 (45%), Gaps = 8/258 (3%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYL 165
N F I + A+ ++ + + F M G V+ LC+ V +A +Y
Sbjct: 373 NHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYF 432
Query: 166 ILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI 225
+ E + P I Y LI C +A ++ M D G + +I++ K
Sbjct: 433 EQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKE 492
Query: 226 NKDDEAMKVFQMM-RVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNL 284
+ E+ K+F +M R+ D+ TY +ID C GK+ +A +L M G++ D +
Sbjct: 493 GRVIESEKLFDLMVRIGVKPDI--ITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCV 550
Query: 285 TLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREM 340
T +++I G R+ +A + E+E PDI Y+ +++GL + RR A +++ +
Sbjct: 551 TYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI 610
Query: 341 IKRGCEPTMHTYIMLLQG 358
+ G + + TY ++L G
Sbjct: 611 TESGTQLELSTYNIILHG 628
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 142/306 (46%), Gaps = 15/306 (4%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAE 120
+++ Q +++T+ ++ I+ KS ++ ++M RL + + + +L
Sbjct: 397 FSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCI 456
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIA 179
+ K M D G N ++ + C+ V+E++ L L + +KP+ I
Sbjct: 457 FDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIIT 516
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
Y LI GYC G + EA+K+ M G +P + +I + KI++ ++A+ +F
Sbjct: 517 YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLF---- 572
Query: 240 VKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
+ M+ G+S TY I++ + + + + A + + + G + + T + I++GL
Sbjct: 573 -REMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCK 631
Query: 296 RGRLREAYKVVEEIEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
EA ++ + + D+ L ++ +I LL++ R EA +F + G P + T
Sbjct: 632 NNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRT 691
Query: 352 YIMLLQ 357
Y ++ +
Sbjct: 692 YSLMAE 697
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 81/193 (41%), Gaps = 21/193 (10%)
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
L TY I+I C G++ + L + K+G D + + ++ GL A R +A +V
Sbjct: 91 LCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVL 150
Query: 308 EIEK-----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG--CEPTMHTYIMLLQGHL 360
P++ Y+ L+KGL R++EA ++ + M G C P + +Y ++ G
Sbjct: 151 RRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFF 210
Query: 361 GKRG-------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPR 407
K G +G P V + + L KA A + + ++ GV
Sbjct: 211 -KEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNC 269
Query: 408 FDYNKFLHYYSNE 420
YN +H Y +
Sbjct: 270 RTYNSIVHGYCSS 282
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 106/244 (43%), Gaps = 3/244 (1%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHI 133
IT++ ++D + +D + L M + D T+ + ++ ++ + F
Sbjct: 515 ITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFRE 574
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIA-YGWLIKGYCDVGD 192
M G + N +++ L Q + AK L + ++E E++ Y ++ G C
Sbjct: 575 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNL 634
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
EA +++ + + + MI K+ ++DEA +F + + + TY
Sbjct: 635 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVP-DVRTYS 693
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP 312
++ + + ++G + + + M + G A++ L+SI+ LL RG + A + I++
Sbjct: 694 LMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEK 753
Query: 313 DISL 316
SL
Sbjct: 754 HFSL 757
>gi|356507117|ref|XP_003522317.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g61400-like [Glycine max]
Length = 498
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 146/322 (45%), Gaps = 17/322 (5%)
Query: 58 LFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALM 116
+F+ Y +P + +TF ++D++ K ++ M + +V N + +
Sbjct: 119 VFYLYCDMLKPGLYPDVVTFATLIDVLRKMGDLKAAXNCFAYMAKFDVVPNGHAYNSLIH 178
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKP 175
+ +L + + M CG + N ++K LC + EA L+ K+ E +
Sbjct: 179 GYCKAGDLLEAMWLRLEMERCGIFSDVVTYNILIKGLCDICRLEEAMGLMEKMDEVEVFA 238
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
N + + +I G C +GD+ +A ++ + MT+E EP++ +I+ F AM ++
Sbjct: 239 NSVXFNVVIDGCCKIGDMEKAIEVCSQMTEEXIEPNVITFSILIDGFCNKGNVRAAMGLY 298
Query: 236 QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
M +K + + TY +ID CK G +A+ + +EM G+ + T+S +I GLL
Sbjct: 299 TEMVIKGIVP-DVVTYTALIDGHCKVGNTKEAFRLHKEMLDAGLSPNMFTVSCVIDGLLK 357
Query: 296 RGRLREAYKVVEE--------------IEKPDISLYHGLIKGLLRLRRAREATQVFREMI 341
GR +A K+ E P+ +Y LI+GL +AT+ F EM
Sbjct: 358 DGRTNDAIKMFLEKTGAGYPGDKMDSRFCSPNSMMYAILIQGLCEDGXIFKATKFFAEMK 417
Query: 342 KRGCEPTMHTYIMLLQGHLGKR 363
G +P M Y+ +LQ H +
Sbjct: 418 WNGFKPDMLVYVTMLQAHFQSK 439
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 99/201 (49%), Gaps = 14/201 (6%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
+ PN AY LI GYC GDL+EA + M G + + +I+ I + +EAM
Sbjct: 166 VVPNGHAYNSLIHGYCKAGDLLEAMWLRLEMERCGIFSDVVTYNILIKGLCDICRLEEAM 225
Query: 233 KVFQMMRVKRMDDLGL----STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
+ + +MD++ + + +VID CK G + +A + +M + IE + +T S
Sbjct: 226 GLME-----KMDEVEVFANSVXFNVVIDGCCKIGDMEKAIEVCSQMTEEXIEPNVITFSI 280
Query: 289 IIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+I G +G +R A + E+ PD+ Y LI G ++ +EA ++ +EM+ G
Sbjct: 281 LIDGFCNKGNVRAAMGLYTEMVIKGIVPDVVTYTALIDGHCKVGNTKEAFRLHKEMLDAG 340
Query: 345 CEPTMHTYIMLLQGHLGKRGR 365
P M T ++ G L K GR
Sbjct: 341 LSPNMFTVSCVIDGLL-KDGR 360
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 87/194 (44%), Gaps = 14/194 (7%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
+S P I YG L+ C GD A K+++ M + G EP++ + +M
Sbjct: 31 MSRRFSPTVITYGILMNCCCAQGDFSNAQKVFDEMLERGIEPNVVIYGQM---------- 80
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
EA VF MR + L TY+ ++D G + + + + +M K G+ D +T ++
Sbjct: 81 GEAEGVFGRMRESGVVTPNLYTYKTLMDGYSMMGDVKRVFYLYCDMLKPGLYPDVVTFAT 140
Query: 289 IIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+I L G L+ A + K P+ Y+ LI G + EA + EM + G
Sbjct: 141 LIDVLRKMGDLKAAXNCFAYMAKFDVVPNGHAYNSLIHGYCKAGDLLEAMWLRLEMERCG 200
Query: 345 CEPTMHTYIMLLQG 358
+ TY +L++G
Sbjct: 201 IFSDVVTYNILIKG 214
>gi|357467093|ref|XP_003603831.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492879|gb|AES74082.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 530
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 134/299 (44%), Gaps = 42/299 (14%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMT 117
FF + + F + +N M+D+ GK R+ DL W + M R + + TF + +
Sbjct: 129 FFNWATTLEG-FPSSPEPYNEMIDLAGKLRHFDLAWHLIDLMKSRGVRITVSTFSVLVRR 187
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNE 177
+ V+ F+ M D GC+ + V+ +LC+++ EA+ L +P+
Sbjct: 188 YVRAGLAAEAVHAFNRMEDYGCKPDKVSFSIVISSLCKKRRASEAELFFDSLKHKFEPDV 247
Query: 178 IAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQM 237
I Y L+ G+C GD+ +A ++++ M + G +P++
Sbjct: 248 IVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNV------------------------- 282
Query: 238 MRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
TY IVID +C+ G+I++A+ + EM G + + +T +S++ + G
Sbjct: 283 -----------YTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAG 331
Query: 298 RLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
R + +V ++++ D Y+ LI+ + EA +V M+K+G P T+
Sbjct: 332 RTEKVLQVYNQMKRLGCAADTISYNFLIESHCKDENLDEAVKVLDTMVKKGVAPNASTF 390
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 83/173 (47%), Gaps = 15/173 (8%)
Query: 201 NLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVID 256
+LM G ++ ++ + + EA+ F RM+D G ++ IVI
Sbjct: 167 DLMKSRGVRITVSTFSVLVRRYVRAGLAAEAVHAFN-----RMEDYGCKPDKVSFSIVIS 221
Query: 257 WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KP 312
+CK+ + S+A + + K E D + +S+++G G + +A +V +++ KP
Sbjct: 222 SLCKKRRASEAELFFDSL-KHKFEPDVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKP 280
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
++ Y +I L R + A VF EMI GC+P T+ L++ H+ K GR
Sbjct: 281 NVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHV-KAGR 332
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/249 (19%), Positives = 115/249 (46%), Gaps = 17/249 (6%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
N T+ I + +L ++ + + F M D GC+ + N +++ + + +
Sbjct: 281 NVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEK----V 336
Query: 167 LKLSEWIK-----PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIET 221
L++ +K + I+Y +LI+ +C +L EA K+ + M +G P+ + +
Sbjct: 337 LQVYNQMKRLGCAADTISYNFLIESHCKDENLDEAVKVLDTMVKKGVAPNASTFNSIFGC 396
Query: 222 FFKINKDDEAMKVFQMMR-VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIE 280
+++ + A +++ M+ +K M + TY I++ I + +EM + +E
Sbjct: 397 IAELHDVNGAHRMYAKMKELKCMPNT--LTYNILMRMFADSKSIDMVLKLKKEMDESEVE 454
Query: 281 ADNLTLSSIIYGLLARGRLREAYKVVEEIE-----KPDISLYHGLIKGLLRLRRAREATQ 335
+ T +I +G AY +++E+ KP++S+Y +++ L + ++ +
Sbjct: 455 PNVNTYRILILMFCEKGHWNNAYNLMKEMVEEKCLKPNLSIYETVLELLRNAGQLKKHEE 514
Query: 336 VFREMIKRG 344
+ +M+ RG
Sbjct: 515 LVEKMVARG 523
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 45/240 (18%), Positives = 94/240 (39%), Gaps = 39/240 (16%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N++TFN ++ + K+ + + +M R D ++ + + + L + V
Sbjct: 316 NAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFLIESHCKDENLDEAVKVL 375
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDV 190
M G + N + + + V A + K+ E PN + Y L++ + D
Sbjct: 376 DTMVKKGVAPNASTFNSIFGCIAELHDVNGAHRMYAKMKELKCMPNTLTYNILMRMFADS 435
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
+ K+ M + EP+++ T
Sbjct: 436 KSIDMVLKLKKEMDESEVEPNVN------------------------------------T 459
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR-GRLREAYKVVEEI 309
YRI+I C++G + AY +++EM + NL++ + LL G+L++ ++VE++
Sbjct: 460 YRILILMFCEKGHWNNAYNLMKEMVEEKCLKPNLSIYETVLELLRNAGQLKKHEELVEKM 519
>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Cucumis sativus]
Length = 728
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/420 (25%), Positives = 186/420 (44%), Gaps = 79/420 (18%)
Query: 83 IIGKSRNIDLF----WETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCG 138
I+G RN ++ W + M R +V++ T + + E + + V FFH + G
Sbjct: 251 IVGYCRNGNVLEADRW-ICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMG 309
Query: 139 CEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE--WIKPNEIAYGWLIKGYCDVGDLIEA 196
+L + ++ LC+R V +A L+ ++ + W KPN + LI G C G A
Sbjct: 310 LSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGW-KPNVYTHTSLIHGLCKKGWTERA 368
Query: 197 SKIW-NLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL----STY 251
+++ L+ + ++P++ MI + K K A +F+ RM + GL +TY
Sbjct: 369 FRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFE-----RMKEQGLVPNTNTY 423
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE---- 307
+ID CK G S+AY ++E M G + T +SI+ GL RGR EA+K++
Sbjct: 424 TTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQ 483
Query: 308 -EIE----------------------------------KPDISLYHGLIKGLLRLRRARE 332
+IE +PDI LY LI R ++
Sbjct: 484 NQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKD 543
Query: 333 ATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG--------RKGPDPLVNFDTI----FVG 380
+ ++F E+IK G PT TY ++ G+ ++ +K D D+I +
Sbjct: 544 SEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALIS 603
Query: 381 GLVKAGKSLDAAKYVERVMNRGV---EVPR----FDYNKFLHYYSNEEGVVMFEEVGKKL 433
GL K + +A + + ++++G+ EV R ++Y K + S +V+ E + KKL
Sbjct: 604 GLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFAS---AMVILERLNKKL 660
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 146/317 (46%), Gaps = 29/317 (9%)
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPN 176
AE+ +LK+ V+ M + G + ++N+++ + +LV A + ++S + P+
Sbjct: 184 FAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPD 243
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
Y ++I GYC G+++EA + M + GF + +I F + + + A+ F
Sbjct: 244 SCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFH 303
Query: 237 MMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
++ +GLS Y +I +CKRG + QA+ +LEEM K G + + T +S+I+G
Sbjct: 304 -----KVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHG 358
Query: 293 LLARGRLREAYKVVEEI-----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
L +G A+++ ++ KP++ Y +I G + + A +F M ++G P
Sbjct: 359 LCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVP 418
Query: 348 TMHTYIMLLQGHLGKRG-------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKY 394
+TY L+ GH K G +G P V GL K G++ +A K
Sbjct: 419 NTNTYTTLIDGHC-KAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKL 477
Query: 395 VERVMNRGVEVPRFDYN 411
+ +E Y
Sbjct: 478 LNTGFQNQIEADGVTYT 494
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 161/362 (44%), Gaps = 20/362 (5%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHI 133
+ F +++ ++ + DL Q+M R+++ D +F I + +L ++ F
Sbjct: 80 VDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGK 139
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWI-KPNEIAYGWLIKGYCDVGD 192
+ G + ++ LC V EA ++ E +PN + + L+ G C G
Sbjct: 140 ITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGR 199
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
++EA + + M ++G +P+ +++ K A+ + + M + Y
Sbjct: 200 IVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYS 259
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK- 311
+ID +CK G+ S A + EM ++GI D T +S+I G + GR +A ++++E+ +
Sbjct: 260 AIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER 319
Query: 312 ---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR----- 363
PD+ Y+ LI ++ + EA +++ EM+ RG P TY ++ G +
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAA 379
Query: 364 -------GRKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
KG P L+ F+T+ + G A + D + + + G+ YN +H
Sbjct: 380 EHMFYLMATKGCSPNLITFNTL-IDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIH 438
Query: 416 YY 417
+
Sbjct: 439 GF 440
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 137/300 (45%), Gaps = 16/300 (5%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHI 133
+T+N +++ K E EM R ++ N T+ + + L + F++
Sbjct: 326 VTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYL 385
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M GC +L N ++ C K + + L+ +++E + + Y LI G+ VGD
Sbjct: 386 MATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGD 445
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD-------- 244
L A + M G P I D +++ K +A+++F++M+ + D
Sbjct: 446 LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFN 505
Query: 245 --DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
+ + TY I+I + GK +A + EEM RGI D +T SS+I GL + RL EA
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 303 YKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
++ + + P++ + LI G + R + ++F EM +RG TYI L+ G
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICG 625
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 140/332 (42%), Gaps = 24/332 (7%)
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGY 187
N F M + G L N ++ C +A+ L+ ++ E I P+ + Y LI +
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAF 335
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
G EA ++++ M G P+ MI+ F K N+ D A +F +M K
Sbjct: 336 VKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP-N 394
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
L T+ +ID C +I +L EM + G+ AD T +++I+G G L A +++
Sbjct: 395 LITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQ 454
Query: 308 EIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE-PTMHTYIMLLQGHLGK 362
E+ PDI L+ GL + ++A ++F+ M K + H +
Sbjct: 455 EMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPF---------- 504
Query: 363 RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE-- 420
G +P V I + GL+ GK L+A + E + +RG+ Y+ + +
Sbjct: 505 ---NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561
Query: 421 --EGVVMFEEVGKKLREVGLADLADIFQRYGK 450
E MF+ +G K + + Y K
Sbjct: 562 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCK 593
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 108/235 (45%), Gaps = 18/235 (7%)
Query: 147 NKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
+ ++ C++ + A+++ L ++ PN I + LI GYC + + ++ + MT+
Sbjct: 364 SSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTE 423
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKIS 265
G + +I F+ + + A+ + Q M + + T ++D +C GK+
Sbjct: 424 TGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCP-DIVTCDTLLDGLCDNGKLK 482
Query: 266 QAYTMLEEMFK-----------RGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK--- 311
A M + M K G+E D T + +I GL+ G+ EA ++ EE+
Sbjct: 483 DALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542
Query: 312 -PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
PD Y +I GL + R EATQ+F M + P + T+ L+ G+ K GR
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYC-KAGR 596
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 125/296 (42%), Gaps = 19/296 (6%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKT-FKIALMTLAE 120
Y + C + N ITFN ++D ++ ID E L EM LV D T + +
Sbjct: 384 YLMATKGC-SPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYL 442
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA--KYLILKLSE------- 171
V +L ++ M G + + ++ LC + +A + +++ S+
Sbjct: 443 VGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASH 502
Query: 172 ---WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++P+ Y LI G + G +EA +++ M G P MI+ K ++
Sbjct: 503 PFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 562
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
DEA ++F M K + T+ +I+ CK G++ + EM +RGI A+ +T +
Sbjct: 563 DEATQMFDSMGSKSFSP-NVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYIT 621
Query: 289 IIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREM 340
+I G G + A + +E+ PD ++ GL + A + ++
Sbjct: 622 LICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
Length = 601
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 155/346 (44%), Gaps = 24/346 (6%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
N ++ + + L R + V M G + +++ LC + A L+
Sbjct: 114 NAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELL 173
Query: 167 LKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI 225
++ + PN I Y L++GYC G + SK++ M+ G EP + + I+ K
Sbjct: 174 GEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKK 233
Query: 226 NKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
+ +A+KV +M V+R + + TY ++I+ +CK G + +A + EM +G+ D +T
Sbjct: 234 GRIGKAVKVKDIM-VQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVT 292
Query: 286 LSSIIYGLLARGRLREAYKVVEE------IEKPDISLYHGLIKGLLRLRRAREATQVFRE 339
+++I GL + A ++EE + +PD+ ++ +I GL ++ R R+A V
Sbjct: 293 YNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREM 352
Query: 340 MIKRGCEPTMHTYIMLLQGHL------------GKRGRKGPDPLVNFDTIFVGGLVKAGK 387
M +RGC + TY L+ G L + G +P +I + G K +
Sbjct: 353 MAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWE 412
Query: 388 SLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN----EEGVVMFEEV 429
A ++ + RG+ F Y L E+ +V+F E+
Sbjct: 413 VDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEM 458
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 118/261 (45%), Gaps = 10/261 (3%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK---TFKIALMTLAEVRELKKM 127
A + +T+N ++ + +D L+EM + + + TF + L ++ +++
Sbjct: 287 APDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQA 346
Query: 128 VNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKG 186
++ +M + GC +L N ++ + V A L+ +L S ++P+ Y LI G
Sbjct: 347 ISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILING 406
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
+ + ++ A MT G + ++ ++ ++AM +F M + L
Sbjct: 407 FSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMDMNC--GL 464
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
Y ++ CK G I A +L++M G+ D +T S +I G L EA +V+
Sbjct: 465 DAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVL 524
Query: 307 EEIEK----PDISLYHGLIKG 323
+++ PD++++ LIKG
Sbjct: 525 KQMAASGFVPDVAVFDSLIKG 545
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 88/188 (46%), Gaps = 4/188 (2%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
++P+ + + +I G C +G + +A + +M + G ++ + +I F +++K + AM
Sbjct: 323 VEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAM 382
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
+ + ++ TY I+I+ K ++ +A L M +RGI A+ ++
Sbjct: 383 NLMSELISSGLEPDSF-TYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAA 441
Query: 293 LLARGRLREAYKVVEEIEKP---DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
L G + +A + E++ D Y ++ G + + A Q+ ++M+ G P
Sbjct: 442 LCQLGMMEQAMVLFNEMDMNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDA 501
Query: 350 HTYIMLLQ 357
TY +L+
Sbjct: 502 VTYSILIN 509
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 90/211 (42%), Gaps = 2/211 (0%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N +T+N ++ + +++ + E+ L D T+ I + +++ E+ + F
Sbjct: 361 NLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFL 420
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVG 191
M G L ++ LCQ ++ +A L ++ + +AY ++ G C G
Sbjct: 421 RTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMDMNCGLDAVAYSTMMYGACKSG 480
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTY 251
D+ A ++ M DEG P +I F K+ +EA +V + M ++ +
Sbjct: 481 DIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVP-DVAVF 539
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEAD 282
+I G+I++ ++ EM + + D
Sbjct: 540 DSLIKGYSAEGQINKILDLIHEMRAKNVAID 570
>gi|297806463|ref|XP_002871115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316952|gb|EFH47374.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 942
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 142/294 (48%), Gaps = 7/294 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGR-RRLVNDKTFKIALMTLAEVRELKKMVNFFHI 133
I +N ++ N+D +T++EM + R +TF + A+ ++++ + F +
Sbjct: 556 ILYNNIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIINGFAKSGDMRRSLEVFDM 615
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGD 192
M CGC ++ N ++ L +++ + +A ++ +++ + NE Y +++GY VGD
Sbjct: 616 MRRCGCVPTVHTFNALINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGD 675
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+A + + + +EG E I + +++ K + A+ V + M + + Y
Sbjct: 676 TGKAFEYFTRLQNEGLEVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSF-VYN 734
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
I+ID +RG + +A ++++M K G++ D T +S I G + A + +EE+E
Sbjct: 735 ILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEAL 794
Query: 311 --KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
KP+I Y LIKG R +A + EM G +P Y LL L +
Sbjct: 795 GVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAVGLKPDKAVYHCLLTSLLSR 848
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 102/244 (41%), Gaps = 28/244 (11%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P + YG LI Y VG + +A ++ +M +EG + ++ MI F K+ A V
Sbjct: 483 PTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAV 542
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
F+ M VK + Y +I C G + +A ++EM K T II G
Sbjct: 543 FEDM-VKEGMKPDVILYNNIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIINGFA 601
Query: 295 ARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
G +R + +V + + + P + ++ LI GL+ R+ +A ++ EM G H
Sbjct: 602 KSGDMRRSLEVFDMMRRCGCVPTVHTFNALINGLVEKRQMEKAVEILDEMTLAGVSANEH 661
Query: 351 TYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY 410
TY ++QG+ G + A +Y R+ N G+EV F Y
Sbjct: 662 TYTKIMQGY-----------------------ASVGDTGKAFEYFTRLQNEGLEVDIFTY 698
Query: 411 NKFL 414
L
Sbjct: 699 EALL 702
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 161/391 (41%), Gaps = 35/391 (8%)
Query: 52 SWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTF 111
+W+ V F+ K + F MV G+ ++ ET + M R +
Sbjct: 294 NWQAVISAFEKINKP------SRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRI 347
Query: 112 KIALMTLAEV-RELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS 170
+L+ V R++++ ++ M + G E SL + +V + A + +
Sbjct: 348 YTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGNAEAADHWFDEAK 407
Query: 171 EWIKP-NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD 229
K N YG +I +C ++ A + M +EG + I + M++ + + +
Sbjct: 408 RIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEK 467
Query: 230 EAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
+ + VF KR+ + G + TY +I+ K GKIS+A + M + G++ + T
Sbjct: 468 KGLIVF-----KRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKT 522
Query: 286 LSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMI 341
S +I G + A+ V E++ KPD+ LY+ +I + A Q +EM
Sbjct: 523 YSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIIAAFCGMGNMDRAIQTVKEMQ 582
Query: 342 KRGCEPTMHTYIMLLQGHLGKRG-------------RKGPDPLVNFDTIFVGGLVKAGKS 388
K PT T++ ++ G K G R G P V+ + GLV+ +
Sbjct: 583 KLRHRPTTRTFMPIING-FAKSGDMRRSLEVFDMMRRCGCVPTVHTFNALINGLVEKRQM 641
Query: 389 LDAAKYVERVMNRGVEVPRFDYNKFLHYYSN 419
A + ++ + GV Y K + Y++
Sbjct: 642 EKAVEILDEMTLAGVSANEHTYTKIMQGYAS 672
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 155/353 (43%), Gaps = 32/353 (9%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK- 168
T+ + +V ++ K + +M + G +++L+ + ++ + K A + + +
Sbjct: 487 TYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANA-FAVFED 545
Query: 169 -LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINK 227
+ E +KP+ I Y +I +C +G++ A + M P+ +I F K
Sbjct: 546 MVKEGMKPDVILYNNIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIINGFAKSGD 605
Query: 228 DDEAMKVFQMMRVKRMDDL-GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTL 286
+++VF MMR R + + T+ +I+ + ++ ++ +A +L+EM G+ A+ T
Sbjct: 606 MRRSLEVFDMMR--RCGCVPTVHTFNALINGLVEKRQMEKAVEILDEMTLAGVSANEHTY 663
Query: 287 SSIIYGLLARGRLREAYKVVEEIEKP----DISLYHGLIKGLLRLRRAREATQVFREMIK 342
+ I+ G + G +A++ ++ DI Y L+K + R + A V +EM
Sbjct: 664 TKIMQGYASVGDTGKAFEYFTRLQNEGLEVDIFTYEALLKACCKSGRMQSALAVTKEMSA 723
Query: 343 RGCEPTMHTYIMLLQGHLGKRG-------------RKGPDPLVNFDTIFVGGLVKAGKSL 389
R Y +L+ G +RG ++G P ++ T F+ KAG
Sbjct: 724 RNIPRNSFVYNILIDG-WARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMN 782
Query: 390 DAAKYVERVMNRGVEVPRFDYNKFLHYYSN----EEGVVMFEEVGKKLREVGL 438
A + +E + GV+ Y + ++ E+ + +EE ++ VGL
Sbjct: 783 RATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEE----MKAVGL 831
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 100/234 (42%), Gaps = 11/234 (4%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIM 134
TFN +++ + + R ++ E L EM + N+ T+ + A V + K +F +
Sbjct: 627 TFNALINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRL 686
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKP-NEIAYGWLIKGYCDVGDL 193
+ G E + ++K C+ + A + ++S P N Y LI G+ GD+
Sbjct: 687 QNEGLEVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDV 746
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG----LS 249
EA+ + M EG +P I I K + A + ++ M+ LG +
Sbjct: 747 WEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQT-----IEEMEALGVKPNIK 801
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
TY +I + +A + EEM G++ D ++ LL+R + EAY
Sbjct: 802 TYTTLIKGWARASLPEKALSCYEEMKAVGLKPDKAVYHCLLTSLLSRASIAEAY 855
>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
Length = 615
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 112/223 (50%), Gaps = 10/223 (4%)
Query: 145 MLNKVVKTLCQRKLVVEA-----KYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKI 199
+LN K Q KL +A + L + + P+ + Y ++ GYC G EA
Sbjct: 207 VLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGT 266
Query: 200 WNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMC 259
M +G EP++ ++ K + EA K+F M KR + ++TYR ++ C
Sbjct: 267 LKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSM-TKRGLEPDIATYRTLLQGHC 325
Query: 260 KRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDIS 315
K G++ ++ + + M + G++ D +T +++I G G++ EA K++ + KPDI
Sbjct: 326 KEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIV 385
Query: 316 LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
Y LI G R+ R +A +F+EM+ G P + TY ++LQG
Sbjct: 386 TYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQG 428
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 119/254 (46%), Gaps = 8/254 (3%)
Query: 111 FKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL- 169
FK + T + + K + + M G N ++ C EA + K+
Sbjct: 212 FKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMR 271
Query: 170 SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD 229
S+ ++PN + Y L+ C G EA KI++ MT G EP I +++ K +
Sbjct: 272 SDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVI 331
Query: 230 EAMKVFQMM-RVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
E+ K+F +M R+ D+ TY +ID C GK+ +A +L M G++ D +T +
Sbjct: 332 ESEKLFDLMVRIGVKPDI--ITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGT 389
Query: 289 IIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+I G R+ +A + +E+ P+I Y+ +++GL RR A +++ + K G
Sbjct: 390 LINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSG 449
Query: 345 CEPTMHTYIMLLQG 358
+ + TY ++L G
Sbjct: 450 TQLELSTYNIILHG 463
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 145/308 (47%), Gaps = 57/308 (18%)
Query: 149 VVKTLCQRKLVVEAKYLILK-LSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDE 206
++K LC K +A ++L+ ++E P+ +Y L+KG CD EA ++ ++M D+
Sbjct: 133 LLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADD 192
Query: 207 ---GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGK 263
G P + + ++ FFK E ++ + + MD
Sbjct: 193 RGGGSPPDVVSYNTVLNGFFK-----EGIQT--KLTAQAMD------------------- 226
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHG 319
+A +L M K G+ D +T +SI++G + G+ +EA ++++ +P++ Y
Sbjct: 227 --KAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSS 284
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK------------- 366
L+ L + R+ EA ++F M KRG EP + TY LLQGH K GR
Sbjct: 285 LMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHC-KEGRVIESEKLFDLMVRI 343
Query: 367 GPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN----EE 421
G P ++ ++T+ + G AGK +A K + +++ GV+ Y ++ Y ++
Sbjct: 344 GVKPDIITYNTL-IDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDD 402
Query: 422 GVVMFEEV 429
+ +F+E+
Sbjct: 403 ALALFKEM 410
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 122/280 (43%), Gaps = 7/280 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFF 131
N +T++ +++ + K+ + M +R L D T++ L + + + F
Sbjct: 278 NVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLF 337
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
+M G + + N ++ C + EA L+ + S +KP+ + YG LI GYC V
Sbjct: 338 DLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRV 397
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
+ +A ++ M G P+I + +++ F + A +++ + K L LST
Sbjct: 398 SRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSI-TKSGTQLELST 456
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y I++ +CK +A M + + ++ + T + +I LL GR+ EA +
Sbjct: 457 YNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHS 516
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
PD+ Y + + L+ E +F M + GC
Sbjct: 517 ANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCS 556
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 108/233 (46%), Gaps = 6/233 (2%)
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYC 188
F M G E + +++ C+ V+E++ L L + +KP+ I Y LI G C
Sbjct: 301 IFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCC 360
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
G + EA+K+ M G +P I +I + ++++ D+A+ +F+ M V +
Sbjct: 361 LAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEM-VSSGVSPNI 419
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY I++ + + + A + + K G + + T + I++GL EA ++ +
Sbjct: 420 ITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQN 479
Query: 309 IEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
+ D+ L ++ +I LL+ R EA +F G P + TY ++ +
Sbjct: 480 LCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAE 532
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 77/184 (41%), Gaps = 33/184 (17%)
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV--- 306
TY I+I C+ G++ + L + K+G D +T + ++ GL A R +A +V
Sbjct: 94 TYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRR 153
Query: 307 --EEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
E PD+ Y+ L+KGL R++EA ++ M RG
Sbjct: 154 MTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMAD-------------------DRG 194
Query: 365 RKGPDPLVNFDTIFVGGLVKAG-------KSLDAAKYVERVM-NRGVEVPRFDYNKFLHY 416
P +V+++T+ G K G +++D A V M GV YN LH
Sbjct: 195 GGSPPDVVSYNTVL-NGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHG 253
Query: 417 YSNE 420
Y +
Sbjct: 254 YCSS 257
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 168/367 (45%), Gaps = 34/367 (9%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
N +T++ ++ + K++ +D E L M + ++ N +T+ + + K+ + F
Sbjct: 233 NVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFL 292
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
M+ G E + N ++ LC+ EA+ + +++ +KP YG L++GY
Sbjct: 293 KKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATK 352
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G L+E + +LM G P+ V +I + K K D+AM VF MR + ++ T
Sbjct: 353 GALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNP-DTVT 411
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y VI +CK G++ A E+M + N+ +S+I+ L + +A +++ E+
Sbjct: 412 YGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEML 471
Query: 311 KPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK 366
I L ++ +I + R E+ ++F M++ G +P + TY L+ G+
Sbjct: 472 DRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGY------- 524
Query: 367 GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN----EEG 422
AGK +A K + +++ G++ YN ++ Y E+
Sbjct: 525 ----------------CLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568
Query: 423 VVMFEEV 429
+V+F E+
Sbjct: 569 LVLFREM 575
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 154/348 (44%), Gaps = 24/348 (6%)
Query: 90 IDLFWETLQEMGRRRLVNDK-TFKIALMTL-AEVRELKKMVNFFHIMNDCGCEYSLEMLN 147
+DL + L + ++ + D F L L A+ R M M GC ++ N
Sbjct: 107 LDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYN 166
Query: 148 KVVKTLCQRKLVVEAKYLILKLSEW---IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
++K LC EA L+ + + P+ ++Y +I G+ GDL +A ++ M
Sbjct: 167 ILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEML 226
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
D G P++ +I K D+AM+V M VK TY ++ C G+
Sbjct: 227 DRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSM-VKNGVMPNCRTYNSIVHGYCSSGQP 285
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGL 320
+A L++M G+E D +T +S++ L GR EA K+ + + KP+I+ Y L
Sbjct: 286 KEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTL 345
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLV-------- 372
++G E + M++ G P + + +L+ + K+G+ LV
Sbjct: 346 LQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAY-AKQGKVDQAMLVFSKMRQQG 404
Query: 373 -NFDTI----FVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
N DT+ +G L K+G+ DA +Y E++++ + YN +H
Sbjct: 405 LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIH 452
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 118/258 (45%), Gaps = 8/258 (3%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYL 165
N F I + A+ ++ + + F M G V+ LC+ V +A +Y
Sbjct: 373 NHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYF 432
Query: 166 ILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI 225
+ E + P I Y LI C +A ++ M D G + +I++ K
Sbjct: 433 EQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKE 492
Query: 226 NKDDEAMKVFQMM-RVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNL 284
+ E+ K+F +M R+ D+ TY +ID C GK+ +A +L M G++ D +
Sbjct: 493 GRVIESEKLFDLMVRIGVKPDI--ITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCV 550
Query: 285 TLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREM 340
T +++I G R+ +A + E+E PDI Y+ +++GL + RR A +++ +
Sbjct: 551 TYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI 610
Query: 341 IKRGCEPTMHTYIMLLQG 358
+ G + + TY ++L G
Sbjct: 611 TESGTQLELSTYNIILHG 628
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 142/306 (46%), Gaps = 15/306 (4%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAE 120
+++ Q +++T+ ++ I+ KS ++ ++M RL + + + +L
Sbjct: 397 FSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCI 456
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIA 179
+ K M D G N ++ + C+ V+E++ L L + +KP+ I
Sbjct: 457 FDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIIT 516
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
Y LI GYC G + EA+K+ M G +P + +I + KI++ ++A+ +F
Sbjct: 517 YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLF---- 572
Query: 240 VKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
+ M+ G+S TY I++ + + + + A + + + G + + T + I++GL
Sbjct: 573 -REMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCK 631
Query: 296 RGRLREAYKVVEEIEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
EA ++ + + D+ L ++ +I LL++ R EA +F + G P + T
Sbjct: 632 NNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRT 691
Query: 352 YIMLLQ 357
Y ++ +
Sbjct: 692 YSLMAE 697
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 81/193 (41%), Gaps = 21/193 (10%)
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
L TY I++ C G++ + L + K+G D + + ++ GL A R +A +V
Sbjct: 91 LCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVL 150
Query: 308 EIEK-----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG--CEPTMHTYIMLLQGHL 360
P++ Y+ L+KGL R++EA ++ + M G C P + +Y ++ G
Sbjct: 151 RRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFF 210
Query: 361 GKRG-------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPR 407
K G +G P V + + L KA A + + ++ GV
Sbjct: 211 -KEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNC 269
Query: 408 FDYNKFLHYYSNE 420
YN +H Y +
Sbjct: 270 RTYNSIVHGYCSS 282
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 106/244 (43%), Gaps = 3/244 (1%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHI 133
IT++ ++D + +D + L M + D T+ + ++ ++ + F
Sbjct: 515 ITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFRE 574
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIA-YGWLIKGYCDVGD 192
M G + N +++ L Q + AK L + ++E E++ Y ++ G C
Sbjct: 575 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNL 634
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
EA +++ + + + MI K+ ++DEA +F + + + TY
Sbjct: 635 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVP-DVRTYS 693
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP 312
++ + + ++G + + + M + G A++ L+SI+ LL RG + A + I++
Sbjct: 694 LMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEK 753
Query: 313 DISL 316
SL
Sbjct: 754 HFSL 757
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 167/376 (44%), Gaps = 30/376 (7%)
Query: 58 LFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALM 116
LF + Q+ P + +T+N +V + K+R +D L++M +R L N+ T+ +
Sbjct: 241 LFKEMVQRGIP---PDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIY 297
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKP 175
+ + K+ V F M + L+ ++ +LC+ + EA+ + ++ + P
Sbjct: 298 GYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNP 357
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
+ +Y ++ GY G L++ + +++LM +G P + +I+ + D+AM +F
Sbjct: 358 DVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIF 417
Query: 236 QMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
MR D G+ TYR VI +C+ GK+ A +M +G+ D + +I
Sbjct: 418 NEMR-----DHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQ 472
Query: 292 GLLARGRLREAYKVVEEIEKP----DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
G G L +A +++ EI DI + +I L +L R +A +F + G P
Sbjct: 473 GFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHP 532
Query: 348 TMHTYIMLLQGH--LGKRGR----------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYV 395
Y ML+ G+ +GK + G +P V V G K G+ +
Sbjct: 533 DAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLF 592
Query: 396 ERVMNRGVEVPRFDYN 411
++ RG++ Y+
Sbjct: 593 REMLQRGIKPSTILYS 608
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 121/241 (50%), Gaps = 9/241 (3%)
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIK--PNEIAYGWLIKGY 187
FF + G ++ + N +++ C+ K EA ++L + + P+ +Y L+K
Sbjct: 133 FFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSL 192
Query: 188 CDVGDLIEASKIWNLMTDEG--FEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD 245
CD G +A + +M + G P++ + +I+ FFK ++A +F+ M V+R
Sbjct: 193 CDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEM-VQRGIP 251
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
L TY V+ +CK + +A L +M + + +N T +++IYG + G+ +EA +V
Sbjct: 252 PDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRV 311
Query: 306 VEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG 361
+E+ + PD+ L+ L + + +EA VF M +G P + +Y ++L G+
Sbjct: 312 FKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYAT 371
Query: 362 K 362
K
Sbjct: 372 K 372
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 116/229 (50%), Gaps = 7/229 (3%)
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVG 191
IMN+ G + + ++ LC+ V++A+ + L ++ + P+ + Y L+ GYC VG
Sbjct: 490 IMNN-GMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVG 548
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTY 251
+ +A ++++ M G EP++ V ++ + KI + DE + +F+ M ++R Y
Sbjct: 549 KMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREM-LQRGIKPSTILY 607
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE- 310
I+ID + + G+ A EM + GI D T + ++ GL EA + +E+
Sbjct: 608 SIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRA 667
Query: 311 ---KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
K +I + +I G+ + RR EA +F + + P++ TY +++
Sbjct: 668 MNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMI 716
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 94/233 (40%), Gaps = 35/233 (15%)
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIA 179
V +++K + F M G E ++ + +V C+ + E L + L IKP+ I
Sbjct: 547 VGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTIL 606
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM------- 232
Y +I G G + A ++ MT+ G I + ++ FK DEA+
Sbjct: 607 YSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELR 666
Query: 233 ----------------KVFQMMRVKRMDDLGLS-----------TYRIVIDWMCKRGKIS 265
+FQ RV+ DL S TY I+I + K G +
Sbjct: 667 AMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVE 726
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISLYH 318
+A M M G E ++ L+ ++ LL + + A + +I++ + SL H
Sbjct: 727 EAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEH 779
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N IT N M+D + ++R ++ + + R RLV T+ I + L + +++ + F
Sbjct: 673 NIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMF 732
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE 171
M + GCE + +LN VV+ L ++ +V A + K+ E
Sbjct: 733 SSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDE 772
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 167/376 (44%), Gaps = 30/376 (7%)
Query: 58 LFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALM 116
LF + Q+ P + +T+N +V + K+R +D L++M +R L N+ T+ +
Sbjct: 254 LFKEMVQRGIP---PDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIY 310
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKP 175
+ + K+ V F M + L+ ++ +LC+ + EA+ + ++ + P
Sbjct: 311 GYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNP 370
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
+ +Y ++ GY G L++ + +++LM +G P + +I+ + D+AM +F
Sbjct: 371 DVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIF 430
Query: 236 QMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
MR D G+ TYR VI +C+ GK+ A +M +G+ D + +I
Sbjct: 431 NEMR-----DHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQ 485
Query: 292 GLLARGRLREAYKVVEEIEKP----DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
G G L +A +++ EI DI + +I L +L R +A +F + G P
Sbjct: 486 GFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHP 545
Query: 348 TMHTYIMLLQGH--LGKRGR----------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYV 395
Y ML+ G+ +GK + G +P V V G K G+ +
Sbjct: 546 DAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLF 605
Query: 396 ERVMNRGVEVPRFDYN 411
++ RG++ Y+
Sbjct: 606 REMLQRGIKPSTILYS 621
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 121/241 (50%), Gaps = 9/241 (3%)
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIK--PNEIAYGWLIKGY 187
FF + G ++ + N +++ C+ K EA ++L + + P+ +Y L+K
Sbjct: 146 FFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSL 205
Query: 188 CDVGDLIEASKIWNLMTDEG--FEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD 245
CD G +A + +M + G P++ + +I+ FFK ++A +F+ M V+R
Sbjct: 206 CDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEM-VQRGIP 264
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
L TY V+ +CK + +A L +M + + +N T +++IYG + G+ +EA +V
Sbjct: 265 PDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRV 324
Query: 306 VEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG 361
+E+ + PD+ L+ L + + +EA VF M +G P + +Y ++L G+
Sbjct: 325 FKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYAT 384
Query: 362 K 362
K
Sbjct: 385 K 385
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 115/229 (50%), Gaps = 7/229 (3%)
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVG 191
IMN+ G + + ++ LC+ V++A+ + L ++ + P+ + Y L+ GYC VG
Sbjct: 503 IMNN-GMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVG 561
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTY 251
+ +A ++++ M G EP++ V ++ + KI + DE + +F+ M ++R Y
Sbjct: 562 KMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREM-LQRGIKPSTILY 620
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE- 310
I+ID + + G+ A EM + GI D T + ++ GL EA + +E+
Sbjct: 621 SIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRA 680
Query: 311 ---KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
K +I + +I G+ + RR EA +F + + P + TY +++
Sbjct: 681 MNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMI 729
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 94/233 (40%), Gaps = 35/233 (15%)
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIA 179
V +++K + F M G E ++ + +V C+ + E L + L IKP+ I
Sbjct: 560 VGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTIL 619
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM------- 232
Y +I G G + A ++ MT+ G I + ++ FK DEA+
Sbjct: 620 YSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELR 679
Query: 233 ----------------KVFQMMRVKRMDDLGLS-----------TYRIVIDWMCKRGKIS 265
+FQ RV+ DL S TY I+I + K G +
Sbjct: 680 AMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVE 739
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISLYH 318
+A M M G E ++ L+ ++ LL + + A + +I++ + SL H
Sbjct: 740 EAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEH 792
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
N IT N M+D + ++R ++ + + R RLV N T+ I + L + +++ + F
Sbjct: 686 NIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMF 745
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE 171
M + GCE + +LN VV+ L ++ +V A + K+ E
Sbjct: 746 SSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDE 785
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 111/241 (46%), Gaps = 10/241 (4%)
Query: 124 LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQR-KLVVEAKYLILKLSEWIKPNEIAYGW 182
L F ++M + CE +++ C+ KL + L I PN+ Y
Sbjct: 458 LNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTA 517
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
+I GYC G + A ++ M + G SI+ + +I K N+ EA K +
Sbjct: 518 MIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKF-----CAK 572
Query: 243 MDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR 298
M + GL TY +I+ +CK + A+ + EM K+ + T +S+IYGL G+
Sbjct: 573 MTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGK 632
Query: 299 LREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+ A ++ E +P I Y L+ GL R R+ EA+Q+ M ++G P+M Y LL
Sbjct: 633 VDAAERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVA 692
Query: 359 H 359
H
Sbjct: 693 H 693
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 127/281 (45%), Gaps = 17/281 (6%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
PN + Y LI G C+ G + EA + MT++G EP++ I + I + D+A+ +
Sbjct: 265 PNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINL 324
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
+ M K+ + TY +I + + GK+ A M +M K G+ + +T +++I L
Sbjct: 325 VRSMG-KKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELC 383
Query: 295 ARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
GR A K+ + +E + Y+ +IKGL + +A VF +M+K G PT+
Sbjct: 384 TEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVV 443
Query: 351 TYIMLL-----QGHLGKRGR-------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERV 398
TY L+ +G+L R +P + G K GK A + +
Sbjct: 444 TYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEM 503
Query: 399 MNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLA 439
+ G+ ++ Y + Y E + + + +++ E G +
Sbjct: 504 LKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCS 544
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 131/280 (46%), Gaps = 17/280 (6%)
Query: 103 RRLVNDKTFKIA----LMTLAEVR---ELKKMVNFFHIMN--DCGC-EYSLEMLNKVVKT 152
RLV DK A ++ + R ELK++ +F H ++ D G ++L N ++
Sbjct: 112 NRLVKDKILAPADHVRILMIKACRNEDELKRVTDFLHGISSSDSGLFGFTLYSFNTLLLQ 171
Query: 153 LCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPS 211
L + +V A+ + ++ S +KP+ + + +I C G + EA ++N + P
Sbjct: 172 LGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPD 231
Query: 212 IDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTML 271
+I + K D+A +VF M VK + TY +I+ +C G+I +A ML
Sbjct: 232 AFTYTSLILGHCRNRKLDKAFEVFDRM-VKDGCNPNSVTYSTLINGLCNEGRIGEAMDML 290
Query: 272 EEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRL 327
EEM ++GIE T + I L GR+ +A +V + K P + Y +I GL R
Sbjct: 291 EEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRA 350
Query: 328 RRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKG 367
+ A ++ +M+K G P TY L+ L GR G
Sbjct: 351 GKMELAIGMYHKMLKEGLVPNTVTYNALIN-ELCTEGRFG 389
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 153/384 (39%), Gaps = 23/384 (5%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+TFN M++I+ K + ++ + L D T+ ++ R+L K F
Sbjct: 198 LTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDR 257
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M GC + + ++ LC + EA ++ +++E I+P Y I CD+G
Sbjct: 258 MVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGR 317
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ +A + M +G PS+ +I F+ K + A+ ++ M +K TY
Sbjct: 318 VDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKM-LKEGLVPNTVTYN 376
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY----KVVEE 308
+I+ +C G+ A + + M G A+ T + II GL + +A K++++
Sbjct: 377 ALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKD 436
Query: 309 IEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK-- 366
P + Y+ LI L+ AT+ M + CEP TY L+ G +G K
Sbjct: 437 GPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFC--KGGKLD 494
Query: 367 ------------GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
G P T + G K GK A ER+ G YN +
Sbjct: 495 SATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAII 554
Query: 415 HYYSNEEGVVMFEEVGKKLREVGL 438
S E+ K+ E GL
Sbjct: 555 SGLSKGNRFSEAEKFCAKMTEQGL 578
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 117/283 (41%), Gaps = 39/283 (13%)
Query: 128 VNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKG 186
++ F M + GC S+E N ++ L + EA+ K++E ++PN I Y LI G
Sbjct: 532 LSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLING 591
Query: 187 YCDVGDLIEASKIWNLM-------------------------------TDEGFEPSIDVV 215
C A KI++ M T+ G EP+ID
Sbjct: 592 LCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTENGCEPTIDTY 651
Query: 216 DKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMF 275
++ + + +EA ++ + M+ K + + Y ++ CK K+ A + M
Sbjct: 652 STLVSGLCREGRSNEASQLVENMKEKGLSP-SMEIYCSLLVAHCKSLKVDCALEIFNLMA 710
Query: 276 KRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAR 331
+G + +I L R EA + + + K D+ ++ L+ GLL+ +
Sbjct: 711 VKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSD 770
Query: 332 EATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK-GPDPLVN 373
+ M R C P++HTYI+L + L K G+ G D + N
Sbjct: 771 LCMKFLYLMESRNCTPSLHTYIILAR-ELSKVGKSIGTDQIGN 812
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 180/399 (45%), Gaps = 50/399 (12%)
Query: 42 FLQICNNFPL-SWRPVYLF---FQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETL 97
F Q+ PL S R VY + Y +K + N++ ++ D IG LF E +
Sbjct: 23 FAQLRKASPLFSLRGVYFSAASYDYREK----LSRNALLNLKLDDAIG------LFGEMV 72
Query: 98 QEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRK 157
Q R L + F L +A++++ +++ M + Y L N ++ C+R
Sbjct: 73 QS---RPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRS 129
Query: 158 LVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVD 216
+ A ++ K+ + +P+ + L+ GYC + +A + + M + G++P +
Sbjct: 130 QLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFN 189
Query: 217 KMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFK 276
+I F NK EA+ + M V+R L TY V++ +CKRG I A ++L++M K
Sbjct: 190 TLIHGLFLHNKASEAVALVDQM-VQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEK 248
Query: 277 RGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRARE 332
IEAD + ++II GL + +A+ + ++E +PD+ Y+ LI L R +
Sbjct: 249 GKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSD 308
Query: 333 ATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAA 392
A+++ MI+R P + T+ + + VK GK ++A
Sbjct: 309 ASRLLSNMIERKINPNVVTF-----------------------SALIDAFVKEGKLVEAE 345
Query: 393 KYVERVMNRGVEVPRFDY----NKFLHYYSNEEGVVMFE 427
K + ++ R ++ F Y N F + +E MFE
Sbjct: 346 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 384
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/428 (23%), Positives = 180/428 (42%), Gaps = 32/428 (7%)
Query: 32 SCNFN-LTHEFFLQICNNFPLSWRPVYLFFQYTQKA-QPCFAHNSITFNRMVDIIGKSRN 89
+ FN L H FL + V L Q Q+ QP + +T+ +V+ + K +
Sbjct: 185 TVTFNTLIHGLFLH-----NKASEAVALVDQMVQRGCQP----DLVTYGAVVNGLCKRGD 235
Query: 90 IDLFWETLQEMGRRRLVNDKT-FKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNK 148
IDL L++M + ++ D + + L + + + F+ M G + N
Sbjct: 236 IDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNS 295
Query: 149 VVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEG 207
++ LC +A L+ + E I PN + + LI + G L+EA K+++ M
Sbjct: 296 LISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 355
Query: 208 FEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQA 267
+P I +I F ++ DEA +F++M K + TY +I CK ++ +
Sbjct: 356 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP-NVVTYNTLIKGFCKAKRVEEG 414
Query: 268 YTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV----VEEIEKPDISLYHGLIKG 323
+ EM +RG+ + +T +++I GL G A K+ V + PDI Y L+ G
Sbjct: 415 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 474
Query: 324 LLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR-------------KGPDP 370
L + + +A VF + K EP ++TY ++++G + K G+ KG P
Sbjct: 475 LCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEG-MCKAGKVEDGWDLFCSLSLKGVKP 533
Query: 371 LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVG 430
V T + G + G +A + G YN + + E+
Sbjct: 534 NVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELI 593
Query: 431 KKLREVGL 438
K++R G
Sbjct: 594 KEMRSCGF 601
>gi|225430190|ref|XP_002282419.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial [Vitis vinifera]
gi|296081989|emb|CBI20994.3| unnamed protein product [Vitis vinifera]
Length = 597
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 182/424 (42%), Gaps = 56/424 (13%)
Query: 11 VCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCF 70
+C +L S + L +L+ I ++F S +P++ F++ K QP F
Sbjct: 75 ICALLTDPALSSGAPLEDALNRTGIKPCSGLLQAIFSHFDASPKPLFTLFRWAMK-QPGF 133
Query: 71 AHNSITFNRMVDIIGKSRNIDLFW----ETLQEMGRRRLVNDKTFKI-------ALMTLA 119
+ FN M+D++ KSR D W + ++ LV+ TF + A MTL+
Sbjct: 134 ESSMTLFNSMIDVLAKSRAFDSAWLLVLDRIEGGEEPELVSSNTFAVLIRRYARAGMTLS 193
Query: 120 EVRELKKMV------------NFFHIMNDCGC---------EY-------------SLEM 145
+R + + F I+ D C EY S+ +
Sbjct: 194 AIRTFEFAFSLDSIRDRDSEWSLFKILLDSLCKEGHVRVASEYFDQQRGLDPSWVPSIRV 253
Query: 146 LNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
N ++ + + + A+ L + E +KP + YG L++GYC + +A ++ M
Sbjct: 254 YNVLLNGWFRSRKLKRAEQLWRTMKRENVKPTVVTYGTLVEGYCRMRRSEKAIELVGEMR 313
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
+G EP++ V + +I++ + + EAM + + V +STY ++ CK G +
Sbjct: 314 GKGIEPNVIVYNPIIDSLAEAGRFKEAMGMMERCLVSETGPT-ISTYNSLVKGFCKAGDL 372
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR-GRLREAY----KVVEEIEKPDISLYHG 319
A +L+ M RG + LT + + +R G+ E K++E PD YH
Sbjct: 373 VGASKVLKMMISRGFDP-TLTTYNYFFRYFSRCGKTEEGMNLYTKMIESGHTPDRLTYHL 431
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFV 379
LIK + R A QV +EM RGC+ + T ML+ HL + + + F+ +
Sbjct: 432 LIKMMCEEERLDLAVQVSKEMRARGCDLDLATSTMLV--HLLCKMHRLEEAFAEFEDMIR 489
Query: 380 GGLV 383
G+V
Sbjct: 490 RGIV 493
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 131/294 (44%), Gaps = 15/294 (5%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNI---DLFWETLQEMGRRRLVNDKTFKIAL 115
+F + P + + +N +++ +SR + + W T++ + V T+ +
Sbjct: 236 YFDQQRGLDPSWVPSIRVYNVLLNGWFRSRKLKRAEQLWRTMKRENVKPTV--VTYGTLV 293
Query: 116 MTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIK 174
+R +K + M G E ++ + N ++ +L + EA ++ + L
Sbjct: 294 EGYCRMRRSEKAIELVGEMRGKGIEPNVIVYNPIIDSLAEAGRFKEAMGMMERCLVSETG 353
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P Y L+KG+C GDL+ ASK+ +M GF+P++ + F + K +E M +
Sbjct: 354 PTISTYNSLVKGFCKAGDLVGASKVLKMMISRGFDPTLTTYNYFFRYFSRCGKTEEGMNL 413
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
+ M ++ TY ++I MC+ ++ A + +EM RG + D T + +++ L
Sbjct: 414 YTKM-IESGHTPDRLTYHLLIKMMCEEERLDLAVQVSKEMRARGCDLDLATSTMLVHLLC 472
Query: 295 ARGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREA--TQVFREMIKRGCE 346
RL EA+ E++ + G++ L R A + EM ++ C+
Sbjct: 473 KMHRLEEAFAEFEDM------IRRGIVPQYLTFERMNNALRKRGLTEMARKLCD 520
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 120/291 (41%), Gaps = 65/291 (22%)
Query: 203 MTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL---STYRIVIDWMC 259
M GFE S+ + + MI+ K D A + + R++ ++ L +T+ ++I
Sbjct: 128 MKQPGFESSMTLFNSMIDVLAKSRAFDSAW-LLVLDRIEGGEEPELVSSNTFAVLIRRYA 186
Query: 260 KRGKISQAYTMLEEMFK----RGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK---- 311
+ G A E F R +++ ++ L G +R A + ++
Sbjct: 187 RAGMTLSAIRTFEFAFSLDSIRDRDSEWSLFKILLDSLCKEGHVRVASEYFDQQRGLDPS 246
Query: 312 --PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH---------- 359
P I +Y+ L+ G R R+ + A Q++R M + +PT+ TY L++G+
Sbjct: 247 WVPSIRVYNVLLNGWFRSRKLKRAEQLWRTMKRENVKPTVVTYGTLVEGYCRMRRSEKAI 306
Query: 360 --LGKRGRKGPDP-LVNFDTI----------------------------------FVGGL 382
+G+ KG +P ++ ++ I V G
Sbjct: 307 ELVGEMRGKGIEPNVIVYNPIIDSLAEAGRFKEAMGMMERCLVSETGPTISTYNSLVKGF 366
Query: 383 VKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYS----NEEGVVMFEEV 429
KAG + A+K ++ +++RG + YN F Y+S EEG+ ++ ++
Sbjct: 367 CKAGDLVGASKVLKMMISRGFDPTLTTYNYFFRYFSRCGKTEEGMNLYTKM 417
>gi|125562258|gb|EAZ07706.1| hypothetical protein OsI_29963 [Oryza sativa Indica Group]
Length = 465
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 138/299 (46%), Gaps = 7/299 (2%)
Query: 65 KAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRE 123
+A+P FA ++ F+ ++ + ++R W +M L ++ TF + + + R
Sbjct: 109 RAKPSFAASADHFDALLLPLARARLFTHLWSLAADMRALGLPLSPSTFSAVISSYGQSRL 168
Query: 124 LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGW 182
+ V F+ + GC + ++ N ++ LC A L+ +++ + + P+ +
Sbjct: 169 TDQAVEVFNRLPRFGCPQTTQVYNALLDALCANGSFAGAYKLLRRMARKGVAPDRATFST 228
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
L+ +C G L EA + M + GF P + D +++ + + +EA K F + K
Sbjct: 229 LVDAWCAAGKLREAQAFLDDMAERGFHPPVRGRDLLVDGLVRAGRLEEA-KAFALRMTKE 287
Query: 243 MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
++T+ + + +C G + A +L + RG+ D T +I + GR+ EA
Sbjct: 288 GVLPDVATFNSLAEALCSSGDVEFAVALLADASSRGLCPDISTYKVMIPAVAKAGRIDEA 347
Query: 303 ----YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
Y +E+ +P SLY +IK L + R +A F +M +G P Y+ML++
Sbjct: 348 FRLFYAALEDGHRPFPSLYAAIIKALCKAGRFADAFAFFGDMKSKGHPPNRPVYVMLVK 406
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 118/280 (42%), Gaps = 27/280 (9%)
Query: 197 SKIWNLMTDE---GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD-DLGLSTYR 252
+ +W+L D G S +I ++ + D+A++VF R+ R Y
Sbjct: 135 THLWSLAADMRALGLPLSPSTFSAVISSYGQSRLTDQAVEVFN--RLPRFGCPQTTQVYN 192
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK- 311
++D +C G + AY +L M ++G+ D T S+++ A G+LREA ++++ +
Sbjct: 193 ALLDALCANGSFAGAYKLLRRMARKGVAPDRATFSTLVDAWCAAGKLREAQAFLDDMAER 252
Query: 312 ---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGP 368
P + L+ GL+R R EA M K G P + T+ L + L G
Sbjct: 253 GFHPPVRGRDLLVDGLVRAGRLEEAKAFALRMTKEGVLPDVATFNSLAEA-LCSSGD--- 308
Query: 369 DPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV-EVPRFDYNKFLHYYSNEEG----V 423
V F + G D + Y +VM V + R D L Y + E+G
Sbjct: 309 ---VEFAVALLADASSRGLCPDISTY--KVMIPAVAKAGRIDEAFRLFYAALEDGHRPFP 363
Query: 424 VMFEEVGKKLREVGLADLADIFQRYGKKMATRERRRNRAI 463
++ + K L + G AD F +G M ++ NR +
Sbjct: 364 SLYAAIIKALCKAG--RFADAFAFFG-DMKSKGHPPNRPV 400
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 105/254 (41%), Gaps = 7/254 (2%)
Query: 77 FNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIMN 135
+N ++D + + + ++ L+ M R+ + D+ TF + +L++ F M
Sbjct: 191 YNALLDALCANGSFAGAYKLLRRMARKGVAPDRATFSTLVDAWCAAGKLREAQAFLDDMA 250
Query: 136 DCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLI 194
+ G + + +V L + + EAK L+++ E + P+ + L + C GD+
Sbjct: 251 ERGFHPPVRGRDLLVDGLVRAGRLEEAKAFALRMTKEGVLPDVATFNSLAEALCSSGDVE 310
Query: 195 EASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIV 254
A + + G P I MI K + DEA ++F S Y +
Sbjct: 311 FAVALLADASSRGLCPDISTYKVMIPAVAKAGRIDEAFRLFYAALEDGHRPFP-SLYAAI 369
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK--- 311
I +CK G+ + A+ +M +G + ++ + GR EA + E+ +
Sbjct: 370 IKALCKAGRFADAFAFFGDMKSKGHPPNRPVYVMLVKMCVRGGRFVEAANYLVEMSEAGF 429
Query: 312 -PDISLYHGLIKGL 324
P ++ ++ GL
Sbjct: 430 APRAPTFNSVVDGL 443
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 69/164 (42%), Gaps = 2/164 (1%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHIM 134
TFN + + + S +++ L + R L D T+K+ + +A+ + + F+
Sbjct: 295 TFNSLAEALCSSGDVEFAVALLADASSRGLCPDISTYKVMIPAVAKAGRIDEAFRLFYAA 354
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDL 193
+ G + ++K LC+ +A + S+ PN Y L+K G
Sbjct: 355 LEDGHRPFPSLYAAIIKALCKAGRFADAFAFFGDMKSKGHPPNRPVYVMLVKMCVRGGRF 414
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQM 237
+EA+ M++ GF P + +++ K D A ++ Q+
Sbjct: 415 VEAANYLVEMSEAGFAPRAPTFNSVVDGLRHCGKHDLAQRMEQL 458
>gi|125604075|gb|EAZ43400.1| hypothetical protein OsJ_28005 [Oryza sativa Japonica Group]
Length = 461
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 138/299 (46%), Gaps = 7/299 (2%)
Query: 65 KAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRE 123
+A+P FA ++ F+ ++ + ++R W +M L ++ TF + + + R
Sbjct: 105 RAKPSFAASADHFDALLLPLARARLFTHLWSLAADMRALGLPLSPSTFSAVISSYGQSRL 164
Query: 124 LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGW 182
+ V F+ + GC + ++ N ++ LC A L+ +++ + + P+ +
Sbjct: 165 TDQAVEVFNRLPRFGCPQTTQVYNALLDALCANGSFAGAYKLLRRMARKGVAPDRATFST 224
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
L+ +C G L EA + M + GF P + D +++ + + +EA K F + K
Sbjct: 225 LVDAWCAAGKLREAQAFLDDMAERGFHPPVRGRDLLVDGLVRAGRLEEA-KAFALRMTKE 283
Query: 243 MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
++T+ + + +C G + A +L + RG+ D T +I + GR+ EA
Sbjct: 284 GVLPDVATFNSLAEALCSSGDVEFAVALLADASSRGLCPDISTYKVMIPAVAKAGRIDEA 343
Query: 303 ----YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
Y +E+ +P SLY +IK L + R +A F +M +G P Y+ML++
Sbjct: 344 FRLFYAALEDGHRPFPSLYAAIIKALCKAGRFADAFAFFGDMKSKGHPPNRPVYVMLVK 402
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 118/280 (42%), Gaps = 27/280 (9%)
Query: 197 SKIWNLMTDE---GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD-DLGLSTYR 252
+ +W+L D G S +I ++ + D+A++VF R+ R Y
Sbjct: 131 THLWSLAADMRALGLPLSPSTFSAVISSYGQSRLTDQAVEVFN--RLPRFGCPQTTQVYN 188
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK- 311
++D +C G + AY +L M ++G+ D T S+++ A G+LREA ++++ +
Sbjct: 189 ALLDALCANGSFAGAYKLLRRMARKGVAPDRATFSTLVDAWCAAGKLREAQAFLDDMAER 248
Query: 312 ---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGP 368
P + L+ GL+R R EA M K G P + T+ L + L G
Sbjct: 249 GFHPPVRGRDLLVDGLVRAGRLEEAKAFALRMTKEGVLPDVATFNSLAEA-LCSSGD--- 304
Query: 369 DPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV-EVPRFDYNKFLHYYSNEEG----V 423
V F + G D + Y +VM V + R D L Y + E+G
Sbjct: 305 ---VEFAVALLADASSRGLCPDISTY--KVMIPAVAKAGRIDEAFRLFYAALEDGHRPFP 359
Query: 424 VMFEEVGKKLREVGLADLADIFQRYGKKMATRERRRNRAI 463
++ + K L + G AD F +G M ++ NR +
Sbjct: 360 SLYAAIIKALCKAG--RFADAFAFFG-DMKSKGHPPNRPV 396
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 105/254 (41%), Gaps = 7/254 (2%)
Query: 77 FNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIMN 135
+N ++D + + + ++ L+ M R+ + D+ TF + +L++ F M
Sbjct: 187 YNALLDALCANGSFAGAYKLLRRMARKGVAPDRATFSTLVDAWCAAGKLREAQAFLDDMA 246
Query: 136 DCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLI 194
+ G + + +V L + + EAK L+++ E + P+ + L + C GD+
Sbjct: 247 ERGFHPPVRGRDLLVDGLVRAGRLEEAKAFALRMTKEGVLPDVATFNSLAEALCSSGDVE 306
Query: 195 EASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIV 254
A + + G P I MI K + DEA ++F S Y +
Sbjct: 307 FAVALLADASSRGLCPDISTYKVMIPAVAKAGRIDEAFRLFYAALEDGHRPFP-SLYAAI 365
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK--- 311
I +CK G+ + A+ +M +G + ++ + GR EA + E+ +
Sbjct: 366 IKALCKAGRFADAFAFFGDMKSKGHPPNRPVYVMLVKMCVRGGRFVEAANYLVEMSEAGF 425
Query: 312 -PDISLYHGLIKGL 324
P ++ ++ GL
Sbjct: 426 APRAPTFNSVVDGL 439
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 69/164 (42%), Gaps = 2/164 (1%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHIM 134
TFN + + + S +++ L + R L D T+K+ + +A+ + + F+
Sbjct: 291 TFNSLAEALCSSGDVEFAVALLADASSRGLCPDISTYKVMIPAVAKAGRIDEAFRLFYAA 350
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDL 193
+ G + ++K LC+ +A + S+ PN Y L+K G
Sbjct: 351 LEDGHRPFPSLYAAIIKALCKAGRFADAFAFFGDMKSKGHPPNRPVYVMLVKMCVRGGRF 410
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQM 237
+EA+ M++ GF P + +++ K D A ++ Q+
Sbjct: 411 VEAANYLVEMSEAGFAPRAPTFNSVVDGLRHCGKHDLAQRMEQL 454
>gi|255566203|ref|XP_002524089.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536657|gb|EEF38299.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1072
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 168/401 (41%), Gaps = 59/401 (14%)
Query: 26 LHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIG 85
+ +L C T L+I +N + FF + Q + H T+N + I G
Sbjct: 672 MQEALEKCTLQFTPGLVLEILHNCSMHGNAALKFFSWL-GVQTGYCHTKETYNMAMKISG 730
Query: 86 KSRNIDLFWETLQEMGRRR-LVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLE 144
+ ++ EM R+ L+ T+ I +M + + F M D G
Sbjct: 731 REKDFKHMRSLFYEMRRKGCLITPDTWAIMIMQYGRTGLTEISLKTFTEMKDNG------ 784
Query: 145 MLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVG--DLIEASKIWNL 202
Y+ PN+ Y +L+ C + EA KI++
Sbjct: 785 -------------------YI---------PNDSTYKYLLISLCGKKGRKVDEAIKIFHE 816
Query: 203 MTDEGFEPSIDVVDKMIETFFKINKDDEAMK-VFQMMRVKRMDDLGLSTYRIVIDWMCKR 261
M + P +VV + + + EA K + R+ L S Y I +C+
Sbjct: 817 MIRTRYIPDREVVGTYLSCLCEAGRLSEARKSTDSLCRIGYTIPLSYSLY---IRALCRS 873
Query: 262 GKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLY 317
G++ +A ++L+E+ D T ++++GLL +GR EA +E +++ P + +Y
Sbjct: 874 GRLEEALSLLDEVGTERSTLDQYTYGTLVHGLLRKGRQEEALAKIESMKEAGINPTVHVY 933
Query: 318 HGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------------LGKRGR 365
LI + ++ +A Q+F +M + GCEPT+ TY L++G+ L
Sbjct: 934 TSLIVHFFKEKQIEKAMQIFEKMQQDGCEPTVVTYSALIRGYMNMERADDAWSVLNHLKL 993
Query: 366 KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
KGP P ++F+ L KAGKS +A + + R++ G+ VP
Sbjct: 994 KGPKPDFKTYSMFISCLCKAGKSEEALQLLSRMLEDGI-VP 1033
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 83/375 (22%), Positives = 166/375 (44%), Gaps = 40/375 (10%)
Query: 40 EFFLQICNNFP-LSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQ 98
E L+ C P L++R FF + K + F H + T+ M+ I G+++ + + ++
Sbjct: 180 EKVLKRCFKVPHLAFR----FFSWV-KMRDGFCHTTKTYYTMLYIAGEAKEFKVVDDLVE 234
Query: 99 EMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQR- 156
EM + D KT+ I + + + + K + FF M GCE ++ +V +LC
Sbjct: 235 EMEKNSCEKDIKTWSILISQFGKAKLIGKALLFFEKMKTSGCEPDEKIYKMMVHSLCNAG 294
Query: 157 KLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVD 216
K V + + + ++ + Y L+ GD+ + N M+ P DV
Sbjct: 295 KGEVALAFYKEMVQKDMRLDLSLYKILLISMAKSGDVGAVHLVANDMSRLSQIPEHDVNV 354
Query: 217 KMIETFFKINKDDEAMKVFQMMRVKRM--DDLGLSTYRIVIDWMCKRGKISQAYTMLEEM 274
++++F K EA+++ + ++ K + D L T ++ +C+ +I+ A ++E M
Sbjct: 355 CILKSFCVAGKIREALELIRDLKNKDILIDYEYLGT---LVKGLCRGDRITDAVEIVEIM 411
Query: 275 FKRGIEADNLTLSSIIYGLLARGRLR--EAYKVVEEIEK-------PDISLYHGLIKGLL 325
KR + + + IYG++ G LR + K +E ++ P S Y L++ L
Sbjct: 412 KKRNL------IDAKIYGIIINGYLRKKDLSKAIELFQRMKESGIQPITSTYTELMQCLF 465
Query: 326 RLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR------------GRKGPDPLVN 373
L + + ++F EM++RG + ++ H+ + KG +P
Sbjct: 466 NLNQYDKGFELFNEMLERGIRVDSVATMAIVAAHVRQNHISEAWEVFNTMKDKGANPTWK 525
Query: 374 FDTIFVGGLVKAGKS 388
+IF+ L + ++
Sbjct: 526 SYSIFIKELCRVSRT 540
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 82/201 (40%), Gaps = 40/201 (19%)
Query: 144 EMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLM 203
E L +VK LC+ + +A ++ + + + YG +I GY DL +A +++ M
Sbjct: 386 EYLGTLVKGLCRGDRITDAVEIVEIMKKRNLIDAKIYGIIINGYLRKKDLSKAIELFQRM 445
Query: 204 TDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGK 263
+ G +P ++++ F +N+ D+ ++F
Sbjct: 446 KESGIQPITSTYTELMQCLFNLNQYDKGFELFN--------------------------- 478
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHG 319
EM +RGI D++ +I+ + + + EA++V ++ P Y
Sbjct: 479 ---------EMLERGIRVDSVATMAIVAAHVRQNHISEAWEVFNTMKDKGANPTWKSYSI 529
Query: 320 LIKGLLRLRRAREATQVFREM 340
IK L R+ R E +V +M
Sbjct: 530 FIKELCRVSRTDEILKVLYKM 550
>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 770
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 171/371 (46%), Gaps = 28/371 (7%)
Query: 34 NFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLF 93
NFNL + F Q + S + + LF + C + +++N +++ + K + +
Sbjct: 131 NFNLLLKGFCQSGD----SHKAMDLFCMMKRN---CLIPDCVSYNTVINGLCKGKRLVEA 183
Query: 94 WETLQEM-GRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKT 152
E +EM G N TF + + ++++ M G E + + + ++
Sbjct: 184 KELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISG 243
Query: 153 LCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPS 211
C + + K L + L + + PN + Y L+ C EA+++ + MT P
Sbjct: 244 FCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPD 303
Query: 212 IDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTML 271
+ + + K + +A+KV +M VKR ++ TY +I+ +CK G++ A +L
Sbjct: 304 VVAYTVLADGLSKNGRASDAIKVLDLM-VKRGEEPNNVTYNAIINGLCKEGRVDDALGIL 362
Query: 272 EEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE------KPDISLYHGLIKGLL 325
E M K+G + D +T S+++ GL G++ EA ++ + KPD+ ++ +I+ L
Sbjct: 363 ETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELC 422
Query: 326 RLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL--GKRGR----------KGPDPLVN 373
+ RR R A +V+ M++RG + TY +L+ G+L GK + G P
Sbjct: 423 KQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAA 482
Query: 374 FDTIFVGGLVK 384
T+ + GL K
Sbjct: 483 TYTVLINGLCK 493
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 130/320 (40%), Gaps = 56/320 (17%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRR----RLVNDKTFKIALMTLAEVRELKKMV 128
N++T+N +++ + K +D L+ M ++ +V T L + ++ E ++
Sbjct: 338 NNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLL 397
Query: 129 NF-----FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKP-NEIAYGW 182
N FHI D + N V++ LC+++ + AK + + E P N + Y
Sbjct: 398 NLLMSKEFHIKPD------VFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNI 451
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI----------NKD---- 228
LI GY G L +A ++W D G P+ +I K+ NK
Sbjct: 452 LIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASG 511
Query: 229 ---------------------DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQA 267
++A +FQ MR D + ++ I+ID K G + A
Sbjct: 512 TRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDP-DVVSFNIIIDGTLKAGDVESA 570
Query: 268 YTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKG 323
+L EM + DN+T S +I L G+L EA + E + PD L+ L+KG
Sbjct: 571 KELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKG 630
Query: 324 LLRLRRAREATQVFREMIKR 343
+ + + ++M +
Sbjct: 631 YSLKGKTEKVVSMLQQMADK 650
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 101/232 (43%), Gaps = 15/232 (6%)
Query: 70 FAHNSITFNRMVD---IIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKK 126
F N +T+N ++D GK W+ + G N T+ + + L +++ L
Sbjct: 442 FPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISP--NAATYTVLINGLCKMQMLSI 499
Query: 127 MVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIK 185
F+ G ++ N ++ +LC+ V +A+ L ++ + P+ +++ +I
Sbjct: 500 AKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIID 559
Query: 186 GYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD 245
G GD+ A ++ M + P +I F K+ + DEA +++ RM
Sbjct: 560 GTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYE-----RMVS 614
Query: 246 LGLSTYRIVIDWMCK----RGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
G ++ D + K +GK + +ML++M + + D+ S+I+ L
Sbjct: 615 CGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILACL 666
>gi|242056423|ref|XP_002457357.1| hypothetical protein SORBIDRAFT_03g005950 [Sorghum bicolor]
gi|241929332|gb|EES02477.1| hypothetical protein SORBIDRAFT_03g005950 [Sorghum bicolor]
Length = 543
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 182/402 (45%), Gaps = 25/402 (6%)
Query: 26 LHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIG 85
L +L ++ + L + +W+ FF + P +AH S + M+DI+G
Sbjct: 105 LSDALRRFAVHMDEDIILTVLQKQRSNWQVALAFFNWAA-TLPGYAHGSRAYTEMLDILG 163
Query: 86 ---KSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYS 142
K R++ ++ + E R +V +K F + L A ++++ + F++ D G E
Sbjct: 164 RMKKVRHMRQLFDEIPEERRVVVVTNKMFAVLLNRYAGAHKVQEAIEVFYLRKDYGFELD 223
Query: 143 LEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNL 202
L ++ +LC+ K V EA+ L + + ++ ++ G+C G L +A +IWN
Sbjct: 224 LVGFQILLMSLCRYKHVEEAEALFREKKDEFPHVTKSWNIILNGWCVKGSLRDAQRIWND 283
Query: 203 MTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRG 262
+ E + I K + A+K+F+ M ++ ++ +ID +C +
Sbjct: 284 IIASKVERDLFTYGTFINALAKNGRISAAVKLFKKMWETGINP-DVAICNCIIDQLCFKN 342
Query: 263 KISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYH 318
+I +A + EM R +AD T +++I L + R+ + Y++++++E P+ Y
Sbjct: 343 RIPEALEIFGEMNDRLCQADVATYNTLIKYLCKKKRMEKVYELLDDMEAKGCSPNNRTYS 402
Query: 319 GLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG---KRG---------RK 366
++K + ++ + + M + GCE TY ++L + ++G R
Sbjct: 403 YVLKT---TEKPKDVIALMQRMEQTGCELDSDTYNLILNLYTNWKYEKGVQQVWDEMERN 459
Query: 367 GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG-VEVPR 407
G P TI V GL GK +A +Y + +RG + PR
Sbjct: 460 GSGPDQRSFTIMVHGLHSQGKLDEALQYYTTMKSRGMIPEPR 501
>gi|357512797|ref|XP_003626687.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355520709|gb|AET01163.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 501
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 155/312 (49%), Gaps = 13/312 (4%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRN-----IDLFWETLQEMGRRRLVNDK-TFK 112
F ++ K P F+ + T++ ++ KS + + L +TL M + DK T
Sbjct: 108 FLRHMTKTHPSFSPDKSTYHILLTHCCKSTDSKYSTLSLIHQTLNLMVSDGISPDKGTVD 167
Query: 113 IALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI--LKLS 170
+A+ +L + V ++ C + N +VK LC+ + + I ++
Sbjct: 168 LAVRSLCTADRVDDAVELIKELSSKHCSPDIYSYNFLVKNLCKSRTLSLVYAFIDEMRTK 227
Query: 171 EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDE 230
+KPN + Y LI C+ +L EA+++ +++ +EGF+P + + +++ + +++ E
Sbjct: 228 FDVKPNLVTYTILIDNVCNTKNLREATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRGSE 287
Query: 231 AMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
A++V+ M+ K ++ L TY +I + K G++S+A +L M ++G D +T +S++
Sbjct: 288 AIEVYNRMKEKGVEP-DLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLM 346
Query: 291 YGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
G+ +G A ++EE+E P+ Y+ L+ GL + R +A +++ M G +
Sbjct: 347 NGMCRKGETLAALALLEEMEMKGCSPNTCTYNTLLHGLCKSRMFDKAMELYGAMKSDGLK 406
Query: 347 PTMHTYIMLLQG 358
M +Y ++
Sbjct: 407 LDMASYATFVRA 418
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 123/273 (45%), Gaps = 25/273 (9%)
Query: 166 ILKLSEWIKPNEIAYGWLIKGYCDVGD-----LIEASKIWNLMTDEGFEPSIDVVDKMIE 220
+ K P++ Y L+ C D L + NLM +G P VD +
Sbjct: 112 MTKTHPSFSPDKSTYHILLTHCCKSTDSKYSTLSLIHQTLNLMVSDGISPDKGTVDLAVR 171
Query: 221 TFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEM-FKRGI 279
+ ++ D+A+++ + + K + +Y ++ +CK +S Y ++EM K +
Sbjct: 172 SLCTADRVDDAVELIKELSSKHCSP-DIYSYNFLVKNLCKSRTLSLVYAFIDEMRTKFDV 230
Query: 280 EADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQ 335
+ + +T + +I + LREA ++V+ +E KPD LY+ ++KG L R EA +
Sbjct: 231 KPNLVTYTILIDNVCNTKNLREATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEAIE 290
Query: 336 VFREMIKRGCEPTMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGL 382
V+ M ++G EP + TY L+ G L K GR KG P T + G+
Sbjct: 291 VYNRMKEKGVEPDLITYNTLIFG-LSKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLMNGM 349
Query: 383 VKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
+ G++L A +E + +G YN LH
Sbjct: 350 CRKGETLAALALLEEMEMKGCSPNTCTYNTLLH 382
>gi|224083888|ref|XP_002307160.1| predicted protein [Populus trichocarpa]
gi|222856609|gb|EEE94156.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 145/303 (47%), Gaps = 16/303 (5%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVNFF 131
NS TF+ +++ + K+ ++DL ++M R D L+ L L++
Sbjct: 323 NSTTFSIVINGLIKTGDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESCGLL 382
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-----EWIKPNEIAYGWLIKG 186
M + G E + N + LC+R + A +L+ K+ WIK + L+K
Sbjct: 383 QEMEESGIEPTSFTNNCIFGCLCRRHDISGALHLLKKMRIHGHVPWIKHST----SLVKE 438
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
C G +EA K M +EGF+P I ++ KI + D+A+K+FQ + +
Sbjct: 439 LCKHGKEVEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQGYCP- 497
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY--- 303
+ Y I+I +CK +I++A +L EM ++G+ +T +++I GL L EA
Sbjct: 498 DVIAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAMLFL 557
Query: 304 -KVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
++E+ +P++ Y LI GL R +A ++ EM ++GC P+ Y+ + G L
Sbjct: 558 SMMIEKEREPNVITYSTLINGLCNAGRPDDALVLWNEMGRKGCTPSSIAYMAFIHG-LSN 616
Query: 363 RGR 365
GR
Sbjct: 617 CGR 619
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 90/180 (50%), Gaps = 5/180 (2%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+ IAY LIKG C + EA + + M ++G PS + +I+ K + +EAM
Sbjct: 497 PDVIAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAMLF 556
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
MM +++ + + TY +I+ +C G+ A + EM ++G ++ + I+GL
Sbjct: 557 LSMM-IEKEREPNVITYSTLINGLCNAGRPDDALVLWNEMGRKGCTPSSIAYMAFIHGLS 615
Query: 295 ARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
GR EA + E+E KPD +Y GL+ L A ++ +EM+ +G P +H
Sbjct: 616 NCGRPNEALVYLREMEEREMKPDTYVYVGLLNAFLVDSNQPLAFEILQEMVDKGKFPDLH 675
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 116/263 (44%), Gaps = 19/263 (7%)
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
KP+ + Y LI G C L E+ + M + G EP+ + + + + A+
Sbjct: 356 KPDLLLYNNLIDGLCTSNRLQESCGLLQEMEESGIEPTSFTNNCIFGCLCRRHDISGALH 415
Query: 234 VFQMMRVK-RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
+ + MR+ + + ST ++ +CK GK +A L +M + G + D + S+ + G
Sbjct: 416 LLKKMRIHGHVPWIKHSTS--LVKELCKHGKEVEACKFLVDMAEEGFQPDIVAYSACLDG 473
Query: 293 LLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
L+ + +A K+ ++I PD+ Y+ LIKGL + +R EA + EM ++G P+
Sbjct: 474 LIKIQEVDQALKLFQDICAQGYCPDVIAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPS 533
Query: 349 MHTYIMLLQG------------HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVE 396
TY L+ G L K +P V + + GL AG+ DA
Sbjct: 534 AVTYNTLIDGLCKTDHLEEAMLFLSMMIEKEREPNVITYSTLINGLCNAGRPDDALVLWN 593
Query: 397 RVMNRGVEVPRFDYNKFLHYYSN 419
+ +G Y F+H SN
Sbjct: 594 EMGRKGCTPSSIAYMAFIHGLSN 616
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 99/450 (22%), Positives = 178/450 (39%), Gaps = 88/450 (19%)
Query: 58 LFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALM 116
L F QK C NS ++ +++++ KS IDL L+EM DK T L
Sbjct: 51 LLFDQVQKMGLCVP-NSYSYTCLLEVLSKSICIDLLEMRLKEMHDHGWGFDKYTLTPVLQ 109
Query: 117 TLAEVRELKKMVNFFHIMNDCGC--EYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-I 173
+ E K ++ F+ ++D G EY +L V + V +A LI + E +
Sbjct: 110 VYCNMAEFDKALDVFNEIHDRGWVDEYVFSIL---VLAFSKWGKVDKACELIETMEEKNV 166
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD-DEAM 232
+ N+ + LI G+ + +A +++ M GF P I + D +I +NKD +A+
Sbjct: 167 RLNKKTFCSLIYGFVKESRVDKALHLFDKMKKSGFTPDISLYDVIIGGLC-VNKDVKKAL 225
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKR-GIEADNLTLSSIIY 291
++ M+ ++ +IV + K + EEM + +A L +S++
Sbjct: 226 CLYSEMKGFKIQ----PDVKIVTKLISSFSKEEELTCFFEEMHEDMDPKASTLLYNSVLN 281
Query: 292 GLLARGRLREAYKVVEEIE--------------------KPDISLYHGLIKGLLRLRRAR 331
L+ G + +AY +++ I P+ + + +I GL++
Sbjct: 282 SLVDNGSVHKAYHLLQAITIGNCIGDGEIGKLFRGKAMVPPNSTTFSIVINGLIKTGDLD 341
Query: 332 EATQVFREMIKRGCEPTMHTYIMLLQG--------------------------------- 358
A +FR+M + GC+P + Y L+ G
Sbjct: 342 LAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESCGLLQEMEESGIEPTSFTNNCIF 401
Query: 359 -------------HLGKRGR-KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVE 404
HL K+ R G P + T V L K GK ++A K++ + G +
Sbjct: 402 GCLCRRHDISGALHLLKKMRIHGHVPWIKHSTSLVKELCKHGKEVEACKFLVDMAEEGFQ 461
Query: 405 VPRFDYNKFLHYYSNEEGVVMFEEVGKKLR 434
Y+ L +G++ +EV + L+
Sbjct: 462 PDIVAYSACL------DGLIKIQEVDQALK 485
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 16/212 (7%)
Query: 139 CEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE--WIKPNEIAYGWLI----KGYCDVGD 192
C S L +++ L LVVEA L ++ + PN +Y L+ K C D
Sbjct: 26 CLMSPGALGFLIRCLGNAGLVVEANLLFDQVQKMGLCVPNSYSYTCLLEVLSKSICI--D 83
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
L+E M D G+ + +++ + + + D+A+ VF + + D +
Sbjct: 84 LLEMR--LKEMHDHGWGFDKYTLTPVLQVYCNMAEFDKALDVFNEIHDRGWVDE--YVFS 139
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK- 311
I++ K GK+ +A ++E M ++ + + T S+IYG + R+ +A + ++++K
Sbjct: 140 ILVLAFSKWGKVDKACELIETMEEKNVRLNKKTFCSLIYGFVKESRVDKALHLFDKMKKS 199
Query: 312 ---PDISLYHGLIKGLLRLRRAREATQVFREM 340
PDISLY +I GL + ++A ++ EM
Sbjct: 200 GFTPDISLYDVIIGGLCVNKDVKKALCLYSEM 231
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 107/264 (40%), Gaps = 21/264 (7%)
Query: 66 AQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVREL 124
A+ F + + ++ +D + K + +D + Q++ + D + I + L + + +
Sbjct: 456 AEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQGYCPDVIAYNILIKGLCKTQRI 515
Query: 125 KKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAK-YLILKLSEWIKPNEIAYGWL 183
+ N H M + G S N ++ LC+ + EA +L + + + +PN I Y L
Sbjct: 516 AEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAMLFLSMMIEKEREPNVITYSTL 575
Query: 184 IKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM 243
I G C+ G +A +WN M +G PS I + +EA+ + M + M
Sbjct: 576 INGLCNAGRPDDALVLWNEMGRKGCTPSSIAYMAFIHGLSNCGRPNEALVYLREMEEREM 635
Query: 244 DDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRG----------IEADNLTL------- 286
Y +++ A+ +L+EM +G I N L
Sbjct: 636 KP-DTYVYVGLLNAFLVDSNQPLAFEILQEMVDKGKFPDLHDKNHISVRNAILKFSEDAR 694
Query: 287 -SSIIYGLLARGRLREAYKVVEEI 309
SS I LLA+G + A V I
Sbjct: 695 TSSSIKNLLAKGSIPSASLSVTGI 718
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 162/367 (44%), Gaps = 35/367 (9%)
Query: 58 LFFQYTQKA-QPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIAL 115
LF + + QP N +T+ ++D + K++ +D Q+M + + D T+ +
Sbjct: 225 LFLEMMDRGIQP----NVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLI 280
Query: 116 MTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIK 174
+ + K++V M+ G + ++ LC EA++L + + IK
Sbjct: 281 HGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIK 340
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
PN YG LI GY G L E + NLM + G P + + + + K DEAM +
Sbjct: 341 PNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHI 400
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
F M+ + + + Y +ID +CK G++ A +M G+ + +S++YGL
Sbjct: 401 FNKMKQQGLSP-DVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLC 459
Query: 295 ARGRLREA----YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
+ +A ++++ + +PD+ ++ ++ L + +A ++ M + G P +
Sbjct: 460 TVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVI 519
Query: 351 TYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY 410
+Y L+ GH VG + +A KSLD +++ G++ + Y
Sbjct: 520 SYTTLIGGH-----------------CLVGRIDEAAKSLDV------MLSVGLKPDEWTY 556
Query: 411 NKFLHYY 417
N LH Y
Sbjct: 557 NTLLHGY 563
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 146/294 (49%), Gaps = 10/294 (3%)
Query: 90 IDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKV 149
+ LF ++E + + T+ I + + L+ F ++ G + ++N++
Sbjct: 76 VSLFNRMIRECTIKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQL 135
Query: 150 VKTLCQRKLVVEAKYLILK-LSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDE- 206
+K LC K + EA +++K + E P+ ++Y L+KG+C+ EA ++ ++M D
Sbjct: 136 LKGLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQ 195
Query: 207 --GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
P++ +I FF + D+A +F M + R + TY VID +CK +
Sbjct: 196 GRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEM-MDRGIQPNVVTYTTVIDGLCKAQVV 254
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGL 320
+A + ++M +G++ DN T + +I+G L+ G+ +E +++EE+ KPD Y L
Sbjct: 255 DRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSL 314
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNF 374
+ L R REA +F MI++G +P + Y +L+ G+ K L+N
Sbjct: 315 LNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNL 368
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/377 (21%), Positives = 163/377 (43%), Gaps = 53/377 (14%)
Query: 85 GKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLE 144
G+ R ++++ G + N + I + A L +M + ++M + G
Sbjct: 322 GRCREARFLFDSMIRKGIKP--NVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHH 379
Query: 145 MLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLM 203
+ N + ++ ++ EA ++ K+ + + P+ + YG LI C +G + +A +N M
Sbjct: 380 IFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQM 439
Query: 204 TDEGFEPSIDVVDKMIETFFKINKDDEAMKVF--------------------------QM 237
+EG P+I V + ++ ++K ++A + + Q+
Sbjct: 440 MNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQV 499
Query: 238 MRVKRMDDL--------GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSI 289
M+ +R+ DL G+ +Y +I C G+I +A L+ M G++ D T +++
Sbjct: 500 MKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTL 559
Query: 290 IYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGC 345
++G GR+ +AY V E+ + P + Y ++ GL RR EA +++ MI G
Sbjct: 560 LHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGK 619
Query: 346 EPTMHTYIMLLQG----HLGKRGRKGPDPLVNFD--------TIFVGGLVKAGKSLDAAK 393
+ + Y ++L G + K L + D I +G L K+G++ DA
Sbjct: 620 QWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMH 679
Query: 394 YVERVMNRGVEVPRFDY 410
+ + G+ F Y
Sbjct: 680 LFATISSYGLVPDVFTY 696
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 147/320 (45%), Gaps = 23/320 (7%)
Query: 77 FNRMVDIIGKSRNIDLFWETLQEMGRRRL----VNDKTFKIALMTLAEVRELKKMVNFFH 132
FN + K ID +M ++ L VN AL L V + ++ F
Sbjct: 381 FNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDD--AVLKFNQ 438
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVG 191
+MN+ G ++ + N +V LC +AK + L++ I+P+ + + ++ C G
Sbjct: 439 MMNE-GVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKG 497
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS-- 249
+++A ++ +LM G P + +I + + DEA K +M +GL
Sbjct: 498 QVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVML-----SVGLKPD 552
Query: 250 --TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA----Y 303
TY ++ C+ G+I AY + EM + GI +T S+I++GL R EA
Sbjct: 553 EWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYL 612
Query: 304 KVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
++ ++ +I +Y+ ++ GL + EA ++F+ + + + + T+ +++ G L K
Sbjct: 613 NMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMI-GALFKS 671
Query: 364 GRKGPDPLVNFDTIFVGGLV 383
GR D + F TI GLV
Sbjct: 672 GRN-EDAMHLFATISSYGLV 690
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 93/204 (45%), Gaps = 24/204 (11%)
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV--- 306
TY I+I C+ G++ + + K G +N+ ++ ++ GL RL EA ++
Sbjct: 96 TYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMDILVKR 155
Query: 307 --EEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIK---RGCEPTMHTYIMLLQGHL- 360
E PD+ Y+ L+KG +RA EA ++ M R C P + +Y +++ G
Sbjct: 156 MPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFT 215
Query: 361 -GKRGR----------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFD 409
G+ + +G P V T + GL KA A ++++++GV+
Sbjct: 216 EGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDT 275
Query: 410 YNKFLHYYSN----EEGVVMFEEV 429
YN +H Y + +E V M EE+
Sbjct: 276 YNCLIHGYLSIGKWKEVVRMLEEM 299
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/422 (24%), Positives = 185/422 (43%), Gaps = 45/422 (10%)
Query: 52 SWRPVYLFFQYT-QKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK- 109
+ + LF + T Q +P + +T+N ++D + K+R +D L++M D
Sbjct: 281 TGKACSLFHEMTRQGVKP----DVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTV 336
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T+ + A + LK+ F M G ++ + N + +LC+ EA + +
Sbjct: 337 TYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSM 396
Query: 170 S-EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
+ + KP+ ++Y L+ GY G + ++N M G V + +I + K
Sbjct: 397 TAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMV 456
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
D+AM +F M+ + + + TY VI + G+++ A +M RGI+ + S
Sbjct: 457 DDAMLIFTEMQQQGVSP-DVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHS 515
Query: 289 IIYGLLARGRLREAYKVVEE-----IEKPDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
II G G L +A ++V E I +PDI ++ +I L + R +A +F +
Sbjct: 516 IIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDI 575
Query: 344 GCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
G P + T+ L+ G+ VG + KA K LDA + V GV
Sbjct: 576 GERPDVITFTSLIDGY-----------------CLVGKMDKAFKILDAMEVV------GV 612
Query: 404 EVPRFDYNKFLH-YYSN---EEGVVMFEEVGKKLREVGLAD----LADIFQRYGKKMATR 455
E Y+ L Y+ N +G+ +F E+ +K + LA +F R G+ +A R
Sbjct: 613 ETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLF-RAGRTVAAR 671
Query: 456 ER 457
++
Sbjct: 672 KK 673
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 148/347 (42%), Gaps = 20/347 (5%)
Query: 74 SITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHI 133
SI + D R +DLF +E G N + + + E K + FH
Sbjct: 232 SIILKGLCDNSMSQRALDLFQMMAKEGGACS-PNVVAYNTVIHGFFKEGETGKACSLFHE 290
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGD 192
M G + + N ++ LC+ + + +A+ ++ ++ + +P+ + Y +I GY +G
Sbjct: 291 MTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGR 350
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
L EA+K++ M G P+I + + + + K + EA ++F M K + +Y
Sbjct: 351 LKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKP-DIVSYC 409
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK- 311
++ G + + M GI AD + +I+ RG + +A + E+++
Sbjct: 410 TLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQ 469
Query: 312 ---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG---- 364
PD+ Y +I R+ R +A + F +M+ RG +P Y ++QG G
Sbjct: 470 GVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKA 529
Query: 365 --------RKG-PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
KG P P + F + L K G+ +DA + V + G
Sbjct: 530 KELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIG 576
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 137/286 (47%), Gaps = 13/286 (4%)
Query: 85 GKSRNIDLFWETLQEMGRRRLV--NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYS 142
G + + LF +E R+V T+ I + R + F + G +
Sbjct: 132 GPALALALFNRVCREQAGPRVVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIH 191
Query: 143 LEMLNKVVKTLCQRKLVVEAKYLIL-KLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIW 200
+ ++K LC EA ++L ++SE PN +Y ++KG CD A ++
Sbjct: 192 QITASTLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLF 251
Query: 201 NLMTDEGFEPSIDVV--DKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLSTYRIVIDW 257
+M EG S +VV + +I FFK + +A +F +M R D+ TY ++ID
Sbjct: 252 QMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDV--VTYNLIIDA 309
Query: 258 MCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PD 313
+CK + +A +L +M G + D +T + +I+G GRL+EA K+ +++ P+
Sbjct: 310 LCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPN 369
Query: 314 ISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
I + + + L + R++EA ++F M +G +P + +Y LL G+
Sbjct: 370 IVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGY 415
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 103/199 (51%), Gaps = 14/199 (7%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGF-EPSIDVVDKMIETFFKINK 227
++ I+PN Y +I+G+C G L++A ++ + M ++G P I + +I + K +
Sbjct: 502 VARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGR 561
Query: 228 DDEAMKVFQMMRVKRMDDLG----LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADN 283
+A +F ++ D+G + T+ +ID C GK+ +A+ +L+ M G+E D
Sbjct: 562 VMDAHDIFDLV-----TDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDI 616
Query: 284 LTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFRE 339
+T S+++ G GR+ + + E++ KP+ Y ++ GL R R A + F E
Sbjct: 617 VTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHE 676
Query: 340 MIKRGCEPTMHTYIMLLQG 358
MI+ G T+ Y ++L G
Sbjct: 677 MIESGTTVTVSIYGIILGG 695
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 29/221 (13%)
Query: 242 RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
R+ L + TY I++D C+ + + + + G++ +T S+++ L R E
Sbjct: 151 RVVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEE 210
Query: 302 AYKVV-----EEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRG--CEPTMHTYIM 354
A V+ E P++ Y ++KGL ++ A +F+ M K G C P + Y
Sbjct: 211 AVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNT 270
Query: 355 LLQGHL--GKRG----------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMN-R 401
++ G G+ G R+G P V + + L KA +++D A+ V R M
Sbjct: 271 VIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKA-RAMDKAELVLRQMTTN 329
Query: 402 GVEVPRFDYNKFLHYYSN----EEGVVMFEEVGKKLREVGL 438
G + YN +H Y+ +E MF +K++ GL
Sbjct: 330 GAQPDTVTYNCMIHGYATLGRLKEAAKMF----RKMKSRGL 366
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 77/180 (42%), Gaps = 34/180 (18%)
Query: 171 EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDE 230
+ +KPN + YG ++ G G + A K ++ M + G ++ + ++ + N DE
Sbjct: 645 KGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADE 704
Query: 231 AMKVFQ--------------------MMRVKRMDDL----------GL----STYRIVID 256
A+ +FQ M +V+R ++ GL STY ++I
Sbjct: 705 AIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMII 764
Query: 257 WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISL 316
+ K G + A M M K GI + L+ II LL +G + +A + +++ I L
Sbjct: 765 NLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILL 824
>gi|413938979|gb|AFW73530.1| ATP binding protein [Zea mays]
Length = 551
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 178/412 (43%), Gaps = 32/412 (7%)
Query: 28 SSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIG-- 85
++L + LT + + + + FF + + Q ++H T+N ++DI+
Sbjct: 97 AALDALGAELTTPLVADVLHRLRYEEKLAFRFFAWASQ-QDGYSHEPTTYNDIIDILSGT 155
Query: 86 --KSRNIDLFWETLQEM---GRRRLVNDKTFKIA-LMTLAEVRELKKMVNFFHIMNDCGC 139
KSR + L M G R + + +I T + ++K+ +
Sbjct: 156 RYKSRQFGVLCNVLDHMKRHGSRSVPVEGLLEILRAYTEKHLTHMRKLAKKRRVRMRTPP 215
Query: 140 EYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKI 199
E + LN ++ C+ +V EA+ + ++ + N Y L G+C D +A K+
Sbjct: 216 E--TDALNVLLDAFCKCGMVKEAEAVFGRVKRKLLGNAETYSTLFFGWCRARDPKKAMKV 273
Query: 200 WNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM--DDLGLSTYRIVIDW 257
M P IE+F EA ++F+ MR + + TY I+I
Sbjct: 274 LEEMIQMKHTPESFTYVAAIESFCSAGLVSEARELFEFMRTEGLTVSSPTAKTYSIMIVA 333
Query: 258 MCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PD 313
+ K ++ + + +L +M G D T +I G+ GRL AY+V++E+ + PD
Sbjct: 334 LAKADRMEECFELLSDMRTCGCMPDVTTYKDLIEGMCLVGRLDAAYRVLDEMGRAGFPPD 393
Query: 314 ISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL-------QGHLG----- 361
I Y+ + L LR A +A ++ MI+ CEP++HTY ML+ + H
Sbjct: 394 IVTYNCFLNVLCSLRNADDALELCERMIEAHCEPSVHTYNMLMMMFFEMGEAHRALDIWL 453
Query: 362 KRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
+ ++G ++ I + GL G++ A ++ V+NR + + Y KF
Sbjct: 454 EMDKRGCQRAIDTYEIMIYGLFDCGETEYATALLDEVINRDM---KLSYKKF 502
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 94/207 (45%), Gaps = 8/207 (3%)
Query: 109 KTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLV--VEAKYLI 166
KT+ I ++ LA+ +++ M CGC + +++ +C LV ++A Y +
Sbjct: 325 KTYSIMIVALAKADRMEECFELLSDMRTCGCMPDVTTYKDLIEGMC---LVGRLDAAYRV 381
Query: 167 LKL--SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFK 224
L P+ + Y + C + + +A ++ M + EPS+ + ++ FF+
Sbjct: 382 LDEMGRAGFPPDIVTYNCFLNVLCSLRNADDALELCERMIEAHCEPSVHTYNMLMMMFFE 441
Query: 225 INKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNL 284
+ + A+ ++ M KR + TY I+I + G+ A +L+E+ R ++
Sbjct: 442 MGEAHRALDIWLEMD-KRGCQRAIDTYEIMIYGLFDCGETEYATALLDEVINRDMKLSYK 500
Query: 285 TLSSIIYGLLARGRLREAYKVVEEIEK 311
+I+ L A G L +++ E + K
Sbjct: 501 KFDAIMLRLSAVGNLGAIHRLSEHMRK 527
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/437 (22%), Positives = 181/437 (41%), Gaps = 63/437 (14%)
Query: 54 RPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFK 112
+P LF + + P + +T+ ++D + K++ D Q+M + N T+
Sbjct: 221 KPYNLFLEMMDRGIP---PDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYN 277
Query: 113 IALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SE 171
+ + + K++V M+ G + + ++ LC+ EA++ + +
Sbjct: 278 CLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGK 337
Query: 172 WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEA 231
IKP+ YG ++ GY G L E + NLM G P+ + + + K D+A
Sbjct: 338 GIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKA 397
Query: 232 MKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
M +F MR + + +S Y +ID +CK G++ A +M G+ D + SS++Y
Sbjct: 398 MDIFNKMRQQGLSPDAVS-YGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVY 456
Query: 292 GLLA-----------------------------------RGRLREAYKVVEEIE----KP 312
GL GR+ E ++V+ IE +P
Sbjct: 457 GLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRP 516
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG------------HL 360
D+ Y+ LI G EA+++ M+ G +P +Y LL G H
Sbjct: 517 DVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHF 576
Query: 361 GKRGRKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY-- 417
K G P +V ++TI + GL + + +A + ++N G + + YN L+
Sbjct: 577 RKMLSNGITPGVVTYNTI-LHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCK 635
Query: 418 SN--EEGVVMFEEVGKK 432
SN +E + MF+ + K
Sbjct: 636 SNCVDEAIKMFQNLCSK 652
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 143/329 (43%), Gaps = 44/329 (13%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAE 120
+ + Q + +++++ ++D + K +D +M + D F + L
Sbjct: 401 FNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCT 460
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIA 179
V + +K+ F M + G ++ N ++ LC+ V+E + L+ + ++P+ I+
Sbjct: 461 VDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVIS 520
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
Y LI G+C G + EASK+ M G +P ++F
Sbjct: 521 YNTLIDGHCLAGTIDEASKLLEGMVSVGLKP---------DSF----------------- 554
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
+Y ++ CK G+I AY+ +M GI +T ++I++GL R
Sbjct: 555 ----------SYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRF 604
Query: 300 REA----YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
EA ++ K DI Y+ ++ GL + EA ++F+ + +G + + T+ ++
Sbjct: 605 SEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIM 664
Query: 356 LQGHLGKRGRKGPDPLVNFDTIFVGGLVK 384
+ G L K GRK D + F I GLV+
Sbjct: 665 I-GALLKGGRK-EDAMDLFAAIPANGLVQ 691
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 127/299 (42%), Gaps = 27/299 (9%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
+ PN Y LI +C +G L + L+ G+ V+++++ + EAM
Sbjct: 90 VAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAM 149
Query: 233 KVFQMMRVKRMDDLGL----STYRIVIDWMCKRGKISQAYTMLEEMFKRGI---EADNLT 285
V ++RM +LG +Y I++ +C + +A +L M + + ++
Sbjct: 150 DVL----LQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVS 205
Query: 286 LSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMI 341
S++I G G++ + Y + E+ PD+ Y +I GL + + A VF++MI
Sbjct: 206 YSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMI 265
Query: 342 KRGCEPTMHTYIMLLQGHLG------------KRGRKGPDPLVNFDTIFVGGLVKAGKSL 389
G +P + TY L+ G+L + GP P + L K G+
Sbjct: 266 DNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCR 325
Query: 390 DAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLADIFQRY 448
+A + + ++ +G++ Y LH Y+ + + ++ + G++ IF +
Sbjct: 326 EARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIF 384
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 114/290 (39%), Gaps = 21/290 (7%)
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE---W-IKPNEIAYGWLIKGYCD 189
M + GC N ++K LC K EA L+ +++ W PN ++Y +I G+
Sbjct: 156 MPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFT 215
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
G + + ++ M D G P + +I+ K D A VFQ M + +
Sbjct: 216 EGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQM-IDNGVKPNID 274
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY----KV 305
TY +I GK + MLEEM G + + T S++ L GR REA +
Sbjct: 275 TYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSM 334
Query: 306 VEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------ 359
+ + KP ++ Y ++ G E + M+ G P H + + +
Sbjct: 335 IGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGII 394
Query: 360 ------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
K ++G P + L K G+ DA +++N GV
Sbjct: 395 DKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGV 444
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 124/309 (40%), Gaps = 41/309 (13%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
N ITFN M+ + K + + + LV N T+++ + L E L++ + F
Sbjct: 657 NIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLF 716
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-------------------- 171
M G + +MLN +V+ L R + A + KL E
Sbjct: 717 SAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSD 776
Query: 172 ------------WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMI 219
+ NE LIK + D A ++ M +G P + + ++
Sbjct: 777 EYQHHAKSLPKKYRILNEANSSALIKKARRIDD---AYSLFREMLMKGLTPDVVTYNTIL 833
Query: 220 ETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGI 279
F+ + EA +++ M + + + TY I+++ +CK + +A+ M + + +G+
Sbjct: 834 HGLFQTGRFSEAKELYLSM-INSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGL 892
Query: 280 EADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQ 335
+ + +T + +I LL GR +A + I PD+ Y + + L+ E
Sbjct: 893 QLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDG 952
Query: 336 VFREMIKRG 344
+F M K G
Sbjct: 953 LFLTMEKSG 961
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 134/314 (42%), Gaps = 16/314 (5%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIM 134
T+N +++ + KS +D + Q + + L +N TF I + L + + ++ F +
Sbjct: 625 TYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAI 684
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDL 193
G ++ VV+ L + + E L + + PN L++ GD+
Sbjct: 685 PANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDI 744
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
A + + + F +I F A + + R+ L +
Sbjct: 745 SRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRI-----LNEANSSA 799
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA----YKVVEEI 309
+I K +I AY++ EM +G+ D +T ++I++GL GR EA ++
Sbjct: 800 LIK---KARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSR 856
Query: 310 EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPD 369
+ +I Y+ ++ GL + EA ++F+ + +G + + T+ +++ G L K GRK D
Sbjct: 857 TQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMI-GALLKGGRK-ED 914
Query: 370 PLVNFDTIFVGGLV 383
+ F I GLV
Sbjct: 915 AMDLFAAIPANGLV 928
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 169/367 (46%), Gaps = 34/367 (9%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
N +T++ ++ + K++ +D E L M + ++ N +T+ + + K+ + F
Sbjct: 233 NVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFL 292
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
M+ G E + N ++ LC+ EA+ + +++ +KP YG L++GY
Sbjct: 293 KKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATK 352
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G L+E + +LM G P+ V +I + K K D+AM VF MR + ++ + T
Sbjct: 353 GALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTV-T 411
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y VI +CK G++ A E+M + N+ +S+I+ L + +A +++ E+
Sbjct: 412 YGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEML 471
Query: 311 KPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK 366
I L ++ +I + R E+ ++F M++ G +P + TY L+ G+
Sbjct: 472 DRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGY------- 524
Query: 367 GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN----EEG 422
AGK +A K + +++ G++ YN ++ Y E+
Sbjct: 525 ----------------CLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568
Query: 423 VVMFEEV 429
+V+F E+
Sbjct: 569 LVLFREM 575
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 137/302 (45%), Gaps = 22/302 (7%)
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW---IKPNEIAYGWLIKGYCDV 190
M GC ++ N ++K LC EA L+ + + P+ ++Y +I G+
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
GDL +A ++ M D G P++ +I K D+AM+V M VK T
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSM-VKNGVMPNCRT 271
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y ++ C G+ +A L++M G+E D +T +S++ L GR EA K+ + +
Sbjct: 272 YNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMT 331
Query: 311 ----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK 366
KP+I+ Y L++G E + M++ G P + + +L+ + K+G+
Sbjct: 332 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAY-AKQGKV 390
Query: 367 GPDPLV---------NFDTI----FVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
LV N DT+ +G L K+G+ DA +Y E++++ + YN
Sbjct: 391 DQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSL 450
Query: 414 LH 415
+H
Sbjct: 451 IH 452
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 118/258 (45%), Gaps = 8/258 (3%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYL 165
N F I + A+ ++ + + F M G V+ LC+ V +A +Y
Sbjct: 373 NHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYF 432
Query: 166 ILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI 225
+ E + P I Y LI C +A ++ M D G + +I++ K
Sbjct: 433 EQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKE 492
Query: 226 NKDDEAMKVFQMM-RVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNL 284
+ E+ K+F +M R+ D+ TY +ID C GK+ +A +L M G++ D +
Sbjct: 493 GRVIESEKLFDLMVRIGVKPDI--ITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCV 550
Query: 285 TLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREM 340
T +++I G R+ +A + E+E PDI Y+ +++GL + RR A +++ +
Sbjct: 551 TYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI 610
Query: 341 IKRGCEPTMHTYIMLLQG 358
+ G + + TY ++L G
Sbjct: 611 TESGTQLELSTYNIILHG 628
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 142/306 (46%), Gaps = 15/306 (4%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAE 120
+++ Q +++T+ ++ I+ KS ++ ++M RL + + + +L
Sbjct: 397 FSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCI 456
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIA 179
+ K M D G N ++ + C+ V+E++ L L + +KP+ I
Sbjct: 457 FDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIIT 516
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
Y LI GYC G + EA+K+ M G +P + +I + KI++ ++A+ +F
Sbjct: 517 YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLF---- 572
Query: 240 VKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
+ M+ G+S TY I++ + + + + A + + + G + + T + I++GL
Sbjct: 573 -REMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCK 631
Query: 296 RGRLREAYKVVEEIEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
EA ++ + + D+ L ++ +I LL++ R EA +F + G P + T
Sbjct: 632 NNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRT 691
Query: 352 YIMLLQ 357
Y ++ +
Sbjct: 692 YSLMAE 697
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 81/193 (41%), Gaps = 21/193 (10%)
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
L TY I+I C G++ + L + K+G D + + ++ GL A R +A +V
Sbjct: 91 LCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVL 150
Query: 308 EIEK-----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG--CEPTMHTYIMLLQGHL 360
P++ Y+ L+KGL R++EA ++ + M G C P + +Y ++ G
Sbjct: 151 RRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFF 210
Query: 361 GKRG-------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPR 407
K G +G P V + + L KA A + + ++ GV
Sbjct: 211 -KEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNC 269
Query: 408 FDYNKFLHYYSNE 420
YN +H Y +
Sbjct: 270 RTYNSIVHGYCSS 282
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 106/244 (43%), Gaps = 3/244 (1%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHI 133
IT++ ++D + +D + L M + D T+ + ++ ++ + F
Sbjct: 515 ITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFRE 574
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIA-YGWLIKGYCDVGD 192
M G + N +++ L Q + AK L + ++E E++ Y ++ G C
Sbjct: 575 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNL 634
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
EA +++ + + + MI K+ ++DEA +F + + + TY
Sbjct: 635 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVP-DVRTYS 693
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP 312
++ + + ++G + + + M + G A++ L+SI+ LL RG + A + I++
Sbjct: 694 LMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEK 753
Query: 313 DISL 316
SL
Sbjct: 754 HFSL 757
>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Brachypodium distachyon]
Length = 938
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 180/411 (43%), Gaps = 27/411 (6%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKT-FKIALMTLAEVRELKKMVNFF 131
+ + + ++D + K+ N+ ++ QE+ + L+ D + + + L + + K+ +F
Sbjct: 523 DHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFL 582
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDV 190
M G + N ++ + +A L+ + IKPN I Y LI G +
Sbjct: 583 EEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEA 642
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ-MMRVKRMDDLGLS 249
G + +A + N M+ GF P+ ++++ + + D +++ + MM D+ +
Sbjct: 643 GAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADI--T 700
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
Y ++ +C G +A +LEEM RGI D +T +++I G G L A+ +++
Sbjct: 701 VYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQM 760
Query: 310 E----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
P+++ ++ L+ GL R E+ V EM KRG EP+ TY +L+ G+ GK+
Sbjct: 761 LYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGY-GKQSN 819
Query: 366 -------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNK 412
KG P V+ + K G A + + NRGV Y+
Sbjct: 820 KVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDI 879
Query: 413 FLHYYSNEEGVVMFEEVGKKLREVGLA----DLADIFQRYGKKMATRERRR 459
+ +S + K ++E G + L+ I + + K + E RR
Sbjct: 880 LVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEARR 930
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 171/370 (46%), Gaps = 46/370 (12%)
Query: 56 VYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIAL 115
Y F+ +K A N +T+ ++D + K++ + L E+ R +V D AL
Sbjct: 298 AYALFREMEKIGA--APNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTAL 355
Query: 116 MTL----AEVRELKKMVNFFHIMND----CGCEYSLEMLNKVVKTLCQRKLVVEAKYLIL 167
M ++ E K M F H ++D G Y++ ++ LC+ V A+ ++
Sbjct: 356 MDWLCKEGKIDEAKDM--FRHALSDNHTPNGVTYTV-----LIDALCKAGNVDGAEQVLS 408
Query: 168 KLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKIN 226
++ E I PN + + +I G G + +A+ M + G +P++ +I+ FK
Sbjct: 409 EMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCL 468
Query: 227 KDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMC----KRGKISQAYTMLEEMFKRGIEAD 282
+ A+ V+ M + G+ + ++D + K GKI +A + EM +RG+ D
Sbjct: 469 GQEAALDVYHEMLCE-----GVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLD 523
Query: 283 NLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFR 338
++ +++I GL G L A+KV +E+ + PD +Y+ I L L +++EA
Sbjct: 524 HVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLE 583
Query: 339 EMIKRGCEPTMHTY--IMLLQGHLGKRG----------RKGPDP-LVNFDTIFVGGLVKA 385
EM G +P TY ++ Q GK R P L+ + T+ V GL +A
Sbjct: 584 EMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIV-GLFEA 642
Query: 386 GKSLDAAKYV 395
G +++ AKY+
Sbjct: 643 G-AVEKAKYL 651
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 112/229 (48%), Gaps = 16/229 (6%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYL--ILKLSEWIKPNEIAYGW--LIKGYCDVGDL 193
G + +N V+ LC+ V A L ++ I ++ GW L+ GYC VGD+
Sbjct: 132 GVPFDAVTVNTVLVGLCRDGRVDRAAALAEVMVRGGGIGGLDVV-GWNSLVDGYCKVGDM 190
Query: 194 IEASKIWNLMTDEGFEPSIDVV--DKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTY 251
A + M +G +DVV + ++ + + D A + M+ ++ + TY
Sbjct: 191 ETAFAVAERMKAQGV--GVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEP-NVVTY 247
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK 311
+ I C+R + A+++ EEM ++G+ D +TLS+++ GL GR EAY + E+EK
Sbjct: 248 TMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEK 307
Query: 312 ----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGC--EPTMHTYIM 354
P+ Y LI L + +R E+ + E++ RG + M+T +M
Sbjct: 308 IGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALM 356
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 134/298 (44%), Gaps = 21/298 (7%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
N +T+ ++D + K+ N+D + L EM + + N TF + L + + K ++
Sbjct: 383 NGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYM 442
Query: 132 HIMNDCGCEYSLEMLNKVV----KTLCQRKLVVEAKYLILK--LSEWIKPNEIAYGWLIK 185
M + G + ++ V+ K L Q EA + L E ++ N+ L+
Sbjct: 443 REMKERGIDPNVVTYGTVIDGSFKCLGQ-----EAALDVYHEMLCEGVEVNKFIVDSLVN 497
Query: 186 GYCDVGDLIEASKIWNLMTDEGFEPSIDVVD--KMIETFFKINKDDEAMKVFQMMRVKRM 243
G G + +A ++ M + G +D V+ +I+ FK A KV Q + K +
Sbjct: 498 GLKKNGKIEKAEALFREMNERGV--LLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNL 555
Query: 244 DDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
+ Y + I+ +C GK +A + LEEM G++ D +T +++I G+ +A
Sbjct: 556 LPDAV-VYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKAL 614
Query: 304 KVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
K++ ++ KP++ Y LI GL +A + EM G PT T+ +LQ
Sbjct: 615 KLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQ 672
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 137/310 (44%), Gaps = 33/310 (10%)
Query: 146 LNKVVKTLCQRKLVVEAKYLILKLSEWI--KPNEIAYGWLIKGYCDVGDLIEASKIWNLM 203
L+ +V LC+ EA Y + + E I PN + Y LI E+ + +
Sbjct: 282 LSALVGGLCKDGRFSEA-YALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEV 340
Query: 204 TDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGK 263
G + + +++ K K DEA +F+ G+ TY ++ID +CK G
Sbjct: 341 VSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGV-TYTVLIDALCKAGN 399
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHG 319
+ A +L EM ++ I + +T SSII GL+ RG + +A + E+++ P++ Y
Sbjct: 400 VDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGT 459
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFV 379
+I G + A V+ EM+ G E ++ +I+ D LVN
Sbjct: 460 VIDGSFKCLGQEAALDVYHEMLCEGVE--VNKFIV--------------DSLVN------ 497
Query: 380 GGLVKAGKSLDAAKYVERVMN-RGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
GL K GK ++ A+ + R MN RGV + +Y + + +VG++L E L
Sbjct: 498 -GLKKNGK-IEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNL 555
Query: 439 ADLADIFQRY 448
A ++ +
Sbjct: 556 LPDAVVYNVF 565
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 118/273 (43%), Gaps = 22/273 (8%)
Query: 166 ILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI 225
+L+ SE + + ++Y ++ G+ + G L + + M G V+ ++ +
Sbjct: 94 LLRSSESV--DTVSYNVVMSGFSEQGGLAPEALLAE-MCKRGVPFDAVTVNTVLVGLCRD 150
Query: 226 NKDDEAMKVFQMM-RVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNL 284
+ D A + ++M R + L + + ++D CK G + A+ + E M +G+ D +
Sbjct: 151 GRVDRAAALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVV 210
Query: 285 TLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREM 340
+S++ GL G + A +V+ +++ P++ Y I R +A ++ EM
Sbjct: 211 GYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEM 270
Query: 341 IKRGCEPTMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGK 387
+++G P + T L+ G L K GR G P + + L KA +
Sbjct: 271 VRKGVLPDVVTLSALV-GGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQR 329
Query: 388 SLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE 420
++ + V++RGV + Y + + E
Sbjct: 330 GNESLSLLGEVVSRGVVMDLIMYTALMDWLCKE 362
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 126/291 (43%), Gaps = 9/291 (3%)
Query: 26 LHSSLSSCNFN---LTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVD 82
L + +SS F+ LTH LQ C+ S + ++ A C + +N +V
Sbjct: 651 LLNEMSSSGFSPTSLTHRRVLQACSQGRRS-DLILEIHEWMMNAGLC--ADITVYNTLVR 707
Query: 83 IIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIMNDCGCEY 141
++ + L+EM R + D TF ++ + L + + M G
Sbjct: 708 VLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISP 767
Query: 142 SLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIW 200
++ N ++ L + E+ ++ ++ + I+P+ + Y L+ GY + +EA +++
Sbjct: 768 NVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLY 827
Query: 201 NLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCK 260
M +GF P + + +I F K+ +A ++F M+ + + TY I++ K
Sbjct: 828 CEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTS-CTYDILVSGWSK 886
Query: 261 RGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK 311
++ L++M ++G TLSSI G EA ++++ + K
Sbjct: 887 LRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEARRLLKNLYK 937
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 87/194 (44%), Gaps = 36/194 (18%)
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE-- 307
+Y +V+ ++G ++ +L EM KRG+ D +T+++++ GL GR+ A + E
Sbjct: 105 SYNVVMSGFSEQGGLAPE-ALLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALAEVM 163
Query: 308 ----EIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
I D+ ++ L+ G ++ A V M +G
Sbjct: 164 VRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGV------------------ 205
Query: 364 GRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNR-GVEVPRFDYNKFLHYYSNEEG 422
G D +V ++++ V GL +AG+ +DAA+ + M R GVE Y F+ Y
Sbjct: 206 ---GVD-VVGYNSL-VAGLCRAGE-VDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNA 259
Query: 423 V----VMFEEVGKK 432
V ++EE+ +K
Sbjct: 260 VDDAFSLYEEMVRK 273
>gi|226495005|ref|NP_001148062.1| GTP binding protein [Zea mays]
gi|195615570|gb|ACG29615.1| GTP binding protein [Zea mays]
Length = 535
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/410 (23%), Positives = 190/410 (46%), Gaps = 36/410 (8%)
Query: 29 SLSSCNFNLT---HEFFLQICNNFPL--------SWRPVYLFFQYTQKAQPCFAHNSITF 77
S S+ N +L+ H+F + + + L +W+ FF + P +AH S +
Sbjct: 89 STSADNADLSGVLHQFMVHMDEDIILMVLQKQRSNWQVALAFFNWAATL-PGYAHGSRAY 147
Query: 78 NRMVDIIG---KSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIM 134
M+DI+G K R++ ++ + E R+ +V +K F + L A ++++ + F++
Sbjct: 148 TEMLDILGRMKKVRHMRQLFDEIPEERRQVVVTNKMFAVLLNRYAGAHKVQEAIEVFYLR 207
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLI 194
D G E L ++ +LC+ K V EA+ L + + ++ ++ G+C G L
Sbjct: 208 KDYGFELDLVGFQILLMSLCRYKHVEEAEALFREKKDEFPHVTKSWNIILNGWCVKGSLR 267
Query: 195 EASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIV 254
+A +IWN + E + I K + A+K+F+ M K ++ ++ +
Sbjct: 268 DAQRIWNDIIASKVERDLFTFGTFINALAKNGRISAAVKLFKQMWEKGINP-DVAICNCI 326
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE---- 310
ID +C + KI +A + EM R +AD T +++I + R+ + Y++++++E
Sbjct: 327 IDQLCFKKKIPEALEIFGEMNDRLCQADVATYNTLIKYMCKIKRMEKVYELLDDMEAKGC 386
Query: 311 KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG---KRG--- 364
P+ Y ++K + ++ + + M + GC+ Y ++L ++ ++G
Sbjct: 387 SPNNRTYSYILKT---TEKPKDVIALMQRMERSGCKLDSDMYNLILNLYIKWKYEKGMQQ 443
Query: 365 ------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG-VEVPR 407
R+G P TI V GL GK +A +Y + +RG + PR
Sbjct: 444 IWDEMERRGSGPDQRSFTIMVHGLHSQGKLDEALQYYTTMKSRGMIPEPR 493
>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
sativus]
Length = 686
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 138/300 (46%), Gaps = 16/300 (5%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+TF+ +++ K E EM R ++ T+ + + L + F++
Sbjct: 324 VTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYL 383
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
GC + N ++ C+ K V + L+ +++E + N I Y LI G+C VGD
Sbjct: 384 TPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGD 443
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD-------- 244
L A + M G P++ + +++ K +A+++F+ M+ +MD
Sbjct: 444 LNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFN 503
Query: 245 --DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
+ + TY I+I + GK +A + EEM RGI D +T SS+I GL + RL EA
Sbjct: 504 GVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 563
Query: 303 YKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
++ + + PD+ ++ LI G + + ++F EM +RG TYI L+ G
Sbjct: 564 TQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYG 623
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 125/256 (48%), Gaps = 11/256 (4%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK- 168
TF L L + + ++ FH M C+ ++ ++ LC+ VVEA L+ +
Sbjct: 153 TFNTLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRM 208
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD-EGFEPSIDVVDKMIETFFKINK 227
L + ++PN+I YG ++ G C +GD + A + M + P++ + + +I+ +K +
Sbjct: 209 LEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGR 268
Query: 228 DDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLS 287
+A +F M+ K + + TY +I+ C G+ S A +L+EM +R I D +T S
Sbjct: 269 HSDAHNLFIEMQEKEIFP-DIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFS 327
Query: 288 SIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
++I + G+ EA ++ +E+ P Y +I G + R A +F +
Sbjct: 328 ALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTK 387
Query: 344 GCEPTMHTYIMLLQGH 359
GC P + T+ L+ G+
Sbjct: 388 GCSPDIITFNTLIAGY 403
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 129/295 (43%), Gaps = 22/295 (7%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N ++ C +A+ L+ ++ E I P+ + + LI + G EA ++++ M
Sbjct: 292 NCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLP 351
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKIS 265
PS MI+ F K N+ D A +F + K + T+ +I C+ ++
Sbjct: 352 RSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSP-DIITFNTLIAGYCRAKRVD 410
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLI 321
+L EM + G+ A+ +T +++I+G G L A +++E+ P++ + L+
Sbjct: 411 DGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLL 470
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGG 381
GL + ++A ++F+ M K + R G +P V I + G
Sbjct: 471 DGLCDNGKLKDALEMFKAMQKSKMDID------------ASRPFNGVEPDVQTYNILICG 518
Query: 382 LVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE----EGVVMFEEVGKK 432
L+ GK L+A + E + +RG+ Y+ + + E MF+ +G K
Sbjct: 519 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 573
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 120/296 (40%), Gaps = 19/296 (6%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAE 120
Y + C + + ITFN ++ +++ +D + L EM LV N T+ + +
Sbjct: 382 YLTPTKGC-SPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQ 440
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE--------- 171
V +L + M G ++ N ++ LC + +A + + +
Sbjct: 441 VGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASR 500
Query: 172 ---WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++P+ Y LI G + G +EA +++ M G P MI+ K ++
Sbjct: 501 PFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 560
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
DEA ++F M K + T+ +I CK G + + EM +RGI AD +T +
Sbjct: 561 DEATQMFDSMGSKSFSP-DVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYIT 619
Query: 289 IIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREM 340
+IYG + A + +E+ PD ++ GL A + ++
Sbjct: 620 LIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLEDL 675
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/262 (19%), Positives = 119/262 (45%), Gaps = 22/262 (8%)
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
N ++ L+K +C L A + +T GF P++ + ++ ++ EA+ +F
Sbjct: 115 NAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLF 174
Query: 236 QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
M + T+ +++ +C+ G++ +A +L+ M + G++ + +T +I+ G+
Sbjct: 175 HQMCKPN-----VVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCK 229
Query: 296 RGRLREAYKVVEEIEK-----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
G A ++ ++E+ P++ +Y+ +I GL + R +A +F EM ++ P +
Sbjct: 230 MGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIV 289
Query: 351 TYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERV 398
TY ++ G L + + +P V + + VK GK +A + + +
Sbjct: 290 TYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEM 349
Query: 399 MNRGVEVPRFDYNKFLHYYSNE 420
+ R + Y+ + + +
Sbjct: 350 LPRSIIPSTVTYSSMIDGFCKQ 371
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 88/189 (46%), Gaps = 5/189 (2%)
Query: 174 KPNEIAYGW----LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD 229
+ +E +G L G+ ++ L +A ++ M PS+ K++ ++ + D
Sbjct: 39 ESDEAGFGGESLKLQSGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPD 98
Query: 230 EAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSI 289
+ + + M + RM ++ I++ C K+ A + ++ K G +T +++
Sbjct: 99 VVISLHKKMEMLRMP-CNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTL 157
Query: 290 IYGLLARGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
++GL R+ EA + ++ KP++ + L+ GL R R EA + M++ G +P
Sbjct: 158 LHGLCVEDRISEALDLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQ 217
Query: 350 HTYIMLLQG 358
TY ++ G
Sbjct: 218 ITYGTIVDG 226
>gi|212274591|ref|NP_001130971.1| GTP binding protein [Zea mays]
gi|194690592|gb|ACF79380.1| unknown [Zea mays]
gi|413947420|gb|AFW80069.1| GTP binding protein [Zea mays]
Length = 535
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 184/402 (45%), Gaps = 25/402 (6%)
Query: 26 LHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIG 85
L +L ++ + L + +W+ FF + P +AH S + M+DI+G
Sbjct: 97 LSGALHQFAVHMDEDIILMVLQKQRSNWQVALAFFNWAA-TLPGYAHGSRAYTEMLDILG 155
Query: 86 ---KSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYS 142
K R++ ++ + E R+ +V +K F + L A ++++ + F++ D G E
Sbjct: 156 RMKKVRHMRQLFDEIPEERRQVVVTNKMFAVLLNRYAGAHKVQEAIEVFYLRKDYGFELD 215
Query: 143 LEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNL 202
L ++ +LC+ K V EA+ L + + ++ ++ G+C G L +A +IWN
Sbjct: 216 LVGFQILLMSLCRYKHVEEAEALFREKKDEFPHVTKSWNIILNGWCVKGSLRDAQRIWND 275
Query: 203 MTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRG 262
+ E + I K + A+K+F+ M K ++ ++ +ID +C +
Sbjct: 276 IIASKVERDLFTFGTFINALAKNGRISAAVKLFKQMWEKGINP-DVAICNCIIDQLCFKK 334
Query: 263 KISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYH 318
KI +A + EM R +AD T +++I + R+ + Y++++++E P+ Y
Sbjct: 335 KIPEALEIFGEMNDRLCQADVATYNTLIKYMCKIKRMEKVYELLDDMEAKGCPPNNRTYS 394
Query: 319 GLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG---KRG---------RK 366
++K + ++ + + M + GC+ Y ++L ++ ++G R+
Sbjct: 395 YILKT---TEKPKDVIALMQRMERTGCKLDSDIYNLILNLYIKWKYEKGMQQIWDEMERR 451
Query: 367 GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG-VEVPR 407
G P TI V GL GK +A +Y + +RG + PR
Sbjct: 452 GSGPDQRSFTIMVHGLHSQGKLDEALQYYTTMKSRGMIPEPR 493
>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
Length = 822
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 140/301 (46%), Gaps = 8/301 (2%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMV 128
F +T+ +++ +GK +++ EM +R L N + + + L + + +
Sbjct: 270 FLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAM 329
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGY 187
M GC+ + N ++ LC V +A++ + + + + PN+++Y LI G+
Sbjct: 330 VILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGF 389
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C G+L+ AS + M G P + +I K EA+ V + M +R
Sbjct: 390 CMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKM-TERQVFPD 448
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
++ Y ++I +CK+ + A +LEEM ++ ++ D +++I G + L +A K+ E
Sbjct: 449 VNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFE 508
Query: 308 EIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
+E +PDI + +IKG + EA M K GC P TY ++ G+ K+
Sbjct: 509 FMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGY-AKQ 567
Query: 364 G 364
G
Sbjct: 568 G 568
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 123/292 (42%), Gaps = 18/292 (6%)
Query: 149 VVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEG 207
+V+ LC V E LI + P+ + Y LI GYC GD+ + M +G
Sbjct: 210 LVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKG 269
Query: 208 FEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQA 267
F P++ +I K ++ +F MR KR + Y VID +CK +QA
Sbjct: 270 FLPTLVTYGSLINCLGKKGDLEKIGSLFLEMR-KRGLSPNVQIYNSVIDALCKCWSATQA 328
Query: 268 YTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKG 323
+L++MF G + D +T +++I GL G +R+A + E + P+ Y LI G
Sbjct: 329 MVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHG 388
Query: 324 LLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL------------GKRGRKGPDPL 371
A+ + EM+ RG P + T+ L+ G + K + P
Sbjct: 389 FCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPD 448
Query: 372 VNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGV 423
VN + + GL K A +E ++ + V+ F Y + + E +
Sbjct: 449 VNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENL 500
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 125/307 (40%), Gaps = 30/307 (9%)
Query: 77 FNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRE--LKKMVNFFHIM 134
+N ++ + K + L+EM + + D+ F A + +R L F M
Sbjct: 452 YNVLISGLCKKHMLPAAKNILEEMLEKNVQPDE-FVYATLIDGFIRSENLGDARKIFEFM 510
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIK----PNEIAYGWLIKGYCDV 190
G + N ++K CQ ++ EA IL +S K P+E Y +I GY
Sbjct: 511 EHKGVRPDIVSCNAMIKGYCQFGMMSEA---ILCMSNMRKVGCIPDEFTYTTVISGYAKQ 567
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G+L A + M +P++ +I + K D A +F M+ + + + T
Sbjct: 568 GNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSP-NVVT 626
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA--------------- 295
Y I+I + K+ K+ +A E M +++TL ++ GL +
Sbjct: 627 YTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSE 686
Query: 296 -RGR---LREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
G+ L K+V +I P S Y+ +I L R REA M K+G P T
Sbjct: 687 VHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPIT 746
Query: 352 YIMLLQG 358
++ LL G
Sbjct: 747 FLSLLYG 753
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 53/267 (19%), Positives = 97/267 (36%), Gaps = 55/267 (20%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDE-GFEPSIDVVDKMIETFFKINKDDEAMK 233
P G L+ Y D G L +A+ + + ++ G P + +++++ + + D+A K
Sbjct: 131 PTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKLLVEQRRWDDARK 190
Query: 234 VFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
++ +EM ADN + ++ GL
Sbjct: 191 LY------------------------------------DEMLGEDSGADNYSTCVLVRGL 214
Query: 294 LARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
GR+ E K++E P + Y+ LI G R + EM +G PT+
Sbjct: 215 CLEGRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTL 274
Query: 350 HTYIMLLQGHLGKRG-------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVE 396
TY L+ LGK+G ++G P V + L K + A ++
Sbjct: 275 VTYGSLINC-LGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILK 333
Query: 397 RVMNRGVEVPRFDYNKFLHYYSNEEGV 423
++ G + +N + +E V
Sbjct: 334 QMFASGCDPDIITFNTLITGLCHEGHV 360
>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 545
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 148/305 (48%), Gaps = 22/305 (7%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N + ++ ++D + K +D ++ EM + + D T+ I + V +L + ++
Sbjct: 197 NVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLL 256
Query: 132 HIMNDCGCEYSLEMLNK-------VVKTLCQRKLVVEAK-YLILKLSEWIKPNEIAYGWL 183
+ E LE +N +V LC+ V EA+ L + + + + + Y L
Sbjct: 257 N-------EMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTL 309
Query: 184 IKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM 243
+ GYC V ++ A +++ MT G P + MI KI + DEA+ +F+ + K M
Sbjct: 310 MDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNM 369
Query: 244 DDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
TY +ID +CK G+IS + + +EM RG D +T +++I L G L A
Sbjct: 370 VP-DTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAI 428
Query: 304 ----KVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
K+ ++ +P++ + L+ GL ++ R + A + F++++ +G + TY +++ G
Sbjct: 429 ALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMING- 487
Query: 360 LGKRG 364
L K G
Sbjct: 488 LCKEG 492
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 159/383 (41%), Gaps = 30/383 (7%)
Query: 111 FKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-L 169
F L++L V+ ++ + M E LN ++ C VV A + K L
Sbjct: 61 FNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKIL 120
Query: 170 SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD 229
+PN I L+KG C G + EA + + + +GF S +I KI +
Sbjct: 121 KLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETR 180
Query: 230 EAMKVFQMMRVKRMD-DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
A+++ + R++R + Y ++ID +CK + +AY + EM +GI D +T S
Sbjct: 181 AAIRLLR--RIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSI 238
Query: 289 IIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
++ G G+L A ++ E+ PDI Y L+ L + + +EA V M+K
Sbjct: 239 LVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKAC 298
Query: 345 CEPTMHTYIMLLQGHL-------GKR-----GRKGPDPLVNFDTIFVGGLVKAGKSLDAA 392
+ Y L+ G+ KR + G P V+ +I + GL K + +A
Sbjct: 299 VNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEAL 358
Query: 393 KYVERVMNRGVEVPRFDYNKFLHYYSNEEGVV----MFEEV---GKKLREVGLADLADIF 445
E + + + Y + + +F+E+ G+ + +L D
Sbjct: 359 NLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDAL 418
Query: 446 QRYG---KKMATRERRRNRAIEP 465
+ G + +A + +++AI P
Sbjct: 419 CKNGHLDRAIALFNKMKDQAIRP 441
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 108/248 (43%), Gaps = 7/248 (2%)
Query: 66 AQPCFAHNSITFNRMVD---IIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVR 122
+ C + + ++ ++D ++ + N + T+ +MG V+ + I + L +++
Sbjct: 295 VKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVH--CYSIMINGLCKIK 352
Query: 123 ELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYG 181
+ + +N F ++ ++ LC+ + L + L P+ I Y
Sbjct: 353 RVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYN 412
Query: 182 WLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK 241
LI C G L A ++N M D+ P++ +++ K+ + A++ FQ + K
Sbjct: 413 NLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTK 472
Query: 242 RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
L + TY ++I+ +CK G + +A + M G +D +T +I + +
Sbjct: 473 GYC-LNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDK 531
Query: 302 AYKVVEEI 309
A K+V E+
Sbjct: 532 AEKLVREM 539
>gi|297819626|ref|XP_002877696.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323534|gb|EFH53955.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1188
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/410 (22%), Positives = 178/410 (43%), Gaps = 22/410 (5%)
Query: 25 RLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDII 84
+L SL+ +L +++ + + Y FF + K QP + H+ MV I+
Sbjct: 86 KLELSLNESGIDLRPGLIVRVLSRCGDAGNLGYRFFLWATK-QPGYCHSYEVCKSMVKIL 144
Query: 85 GKSRNIDLFWETLQEMGRR--RLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYS 142
K R W ++EM + L+ + F + + A +KK V M G E
Sbjct: 145 SKMRQFGAVWGLIEEMRKENPELIEPELFVVLIRRFASANMVKKAVEVLDEMPKYGFEPD 204
Query: 143 LEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNL 202
+ ++ LC+ V +A + + E I PN + L+ G+C G L+EA ++
Sbjct: 205 EYVFGCLLDALCKNGSVKDASKVFEDMREKIPPNLRYFTSLLYGWCREGKLMEAKEVLVQ 264
Query: 203 MTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRG 262
M + G EP I V ++ + K +A + MR KR + + Y ++I +C+
Sbjct: 265 MKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLLNDMR-KRGYEPNANCYTVLIQALCRTE 323
Query: 263 K-ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLY 317
K + +A + EM + G EAD +T +++I G G + + Y V++++ K P Y
Sbjct: 324 KRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTY 383
Query: 318 HGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK----------- 366
++ + + E ++ +M + GC P + Y ++++ R K
Sbjct: 384 MQILVAHEKKEQFEECLELIEKMKQIGCHPDLLIYNVVIRLACNFREVKEAVRLWNEMEA 443
Query: 367 -GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV-EVPRFDYNKFL 414
G P + I + G G ++A + + +++RG+ P++ K L
Sbjct: 444 NGLSPGADMFVIMINGFTSQGYLIEACSHFKEMVSRGIFSAPQYGTLKSL 493
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 120/260 (46%), Gaps = 30/260 (11%)
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
LI+ + + +A ++ + M GFEP V +++ K +A KVF+ MR K
Sbjct: 176 LIRRFASANMVKKAVEVLDEMPKYGFEPDEYVFGCLLDALCKNGSVKDASKVFEDMREKI 235
Query: 243 MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
+L T ++ W C+ GK+ +A +L +M + G+E D + ++++ G G++ +A
Sbjct: 236 PPNLRYFT-SLLYGW-CREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADA 293
Query: 303 YKVVEEIEK----PDISLYHGLIKGLLRL-RRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
Y ++ ++ K P+ + Y LI+ L R +R EA +VF EM + GCE + TY
Sbjct: 294 YDLLNDMRKRGYEPNANCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTY----- 348
Query: 358 GHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
T + G K G ++ + +GV + Y + L +
Sbjct: 349 ------------------TALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQILVAH 390
Query: 418 SNEEGVVMFEEVGKKLREVG 437
+E E+ +K++++G
Sbjct: 391 EKKEQFEECLELIEKMKQIG 410
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 48/247 (19%), Positives = 102/247 (41%), Gaps = 12/247 (4%)
Query: 122 RELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK--LSEWIKPNEIA 179
+ + + + F M GCE + ++ C+ ++ + Y +L + + P+++
Sbjct: 324 KRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMI-DKGYSVLDDMRKKGVMPSQVT 382
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
Y ++ + E ++ M G P + + + +I + EA++++ M
Sbjct: 383 YMQILVAHEKKEQFEECLELIEKMKQIGCHPDLLIYNVVIRLACNFREVKEAVRLWNEME 442
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGI--EADNLTLSSIIYGLLARG 297
+ G + I+I+ +G + +A + +EM RGI TL S++ LL
Sbjct: 443 ANGLSP-GADMFVIMINGFTSQGYLIEACSHFKEMVSRGIFSAPQYGTLKSLLNTLLRDD 501
Query: 298 RLREAYKVVEEIEKP------DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
+L A V I ++S + I L +EA +M++ P +T
Sbjct: 502 KLEMAKDVWSCISNKTSSCELNVSAWTIWIHALFAKGHVKEACSYCLDMMEMDLMPQPNT 561
Query: 352 YIMLLQG 358
Y+ L++G
Sbjct: 562 YVKLMKG 568
>gi|195655361|gb|ACG47148.1| ATP binding protein [Zea mays]
Length = 551
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 178/412 (43%), Gaps = 32/412 (7%)
Query: 28 SSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIG-- 85
++L + LT + + + + FF + + Q ++H T+N ++DI+
Sbjct: 97 AALDALGAELTTPLVADVLHRLLYEEKLAFRFFAWASQ-QDGYSHEPTTYNDIIDILSGT 155
Query: 86 --KSRNIDLFWETLQEM---GRRRLVNDKTFKIA-LMTLAEVRELKKMVNFFHIMNDCGC 139
KSR + L M G R + + +I T + ++K+ +
Sbjct: 156 RYKSRQFGVLCNVLDHMKRHGSRSVPVEGLLEILRAYTEKHLTHMRKLAKKRRVRMRTPP 215
Query: 140 EYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKI 199
E + LN ++ C+ +V EA+ + ++ + N Y L G+C D +A K+
Sbjct: 216 E--TDALNVLLDAFCKCGMVKEAEAVFGRVKRKLLGNAETYSTLFFGWCRARDPKKAMKV 273
Query: 200 WNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM--DDLGLSTYRIVIDW 257
M P IE+F EA ++F+ MR + + TY I+I
Sbjct: 274 LEEMIQMKHTPESFTYVAAIESFCSAGLVSEARELFEFMRTEGLTVSSPTAKTYSIMIVA 333
Query: 258 MCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PD 313
+ K ++ + + +L +M G D T +I G+ GRL AY+V++E+ + PD
Sbjct: 334 LAKADRMEECFELLSDMRTCGCMPDVTTYKDLIEGMCLVGRLDAAYRVLDEMGRAGFPPD 393
Query: 314 ISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL-------QGHLG----- 361
I Y+ + L LR A +A ++ MI+ CEP++HTY ML+ + H
Sbjct: 394 IVTYNCFLNVLCSLRNADDALELCERMIEAHCEPSVHTYNMLMMMFFEMGEAHRALDIWL 453
Query: 362 KRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
+ ++G ++ I + GL G++ A ++ V+NR + + Y KF
Sbjct: 454 EMDKRGCQRAIDTYEIMIYGLFDCGETEYATALLDEVINRDM---KLSYKKF 502
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 94/207 (45%), Gaps = 8/207 (3%)
Query: 109 KTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLV--VEAKYLI 166
KT+ I ++ LA+ +++ M CGC + +++ +C LV ++A Y +
Sbjct: 325 KTYSIMIVALAKADRMEECFELLSDMRTCGCMPDVTTYKDLIEGMC---LVGRLDAAYRV 381
Query: 167 LKL--SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFK 224
L P+ + Y + C + + +A ++ M + EPS+ + ++ FF+
Sbjct: 382 LDEMGRAGFPPDIVTYNCFLNVLCSLRNADDALELCERMIEAHCEPSVHTYNMLMMMFFE 441
Query: 225 INKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNL 284
+ + A+ ++ M KR + TY I+I + G+ A +L+E+ R ++
Sbjct: 442 MGEAHRALDIWLEMD-KRGCQRAIDTYEIMIYGLFDCGETEYATALLDEVINRDMKLSYK 500
Query: 285 TLSSIIYGLLARGRLREAYKVVEEIEK 311
+I+ L A G L +++ E + K
Sbjct: 501 KFDAIMLRLSAVGNLGAIHRLSEHMRK 527
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 169/367 (46%), Gaps = 34/367 (9%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
N +T++ ++ + K++ +D E L M + ++ N +T+ + + K+ + F
Sbjct: 233 NVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFL 292
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
M+ G E + N ++ LC+ EA+ + +++ +KP YG L++GY
Sbjct: 293 KKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATK 352
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G L+E + +LM G P+ V +I + K K D+AM VF MR + ++ + T
Sbjct: 353 GALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTV-T 411
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y VI +CK G++ A E+M + N+ +S+I+ L + +A +++ E+
Sbjct: 412 YGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEML 471
Query: 311 KPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK 366
I L ++ +I + R E+ ++F M++ G +P + TY L+ G+
Sbjct: 472 DRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGY------- 524
Query: 367 GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN----EEG 422
AGK +A K + +++ G++ YN ++ Y E+
Sbjct: 525 ----------------CLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568
Query: 423 VVMFEEV 429
+V+F E+
Sbjct: 569 LVLFREM 575
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 141/317 (44%), Gaps = 22/317 (6%)
Query: 119 AEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW---IKP 175
A+ R M M GC ++ N ++K LC EA L+ + + P
Sbjct: 138 ADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPP 197
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
+ ++Y +I G+ GDL +A ++ M D G P++ +I K D+AM+V
Sbjct: 198 DVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVL 257
Query: 236 QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
M VK TY ++ C G+ +A L++M G+E D +T +S++ L
Sbjct: 258 TSM-VKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCK 316
Query: 296 RGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
GR EA K+ + + KP+I+ Y L++G E + M++ G P +
Sbjct: 317 NGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 376
Query: 352 YIMLLQGHLGKRGRKGPDPLV---------NFDTI----FVGGLVKAGKSLDAAKYVERV 398
+ +L+ + K+G+ LV N DT+ +G L K+G+ DA +Y E++
Sbjct: 377 FSILICAY-AKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435
Query: 399 MNRGVEVPRFDYNKFLH 415
++ + YN +H
Sbjct: 436 IDERLSPGNIVYNSLIH 452
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 118/258 (45%), Gaps = 8/258 (3%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYL 165
N F I + A+ ++ + + F M G V+ LC+ V +A +Y
Sbjct: 373 NHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYF 432
Query: 166 ILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI 225
+ E + P I Y LI C +A ++ M D G + +I++ K
Sbjct: 433 EQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKE 492
Query: 226 NKDDEAMKVFQMM-RVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNL 284
+ E+ K+F +M R+ D+ TY +ID C GK+ +A +L M G++ D +
Sbjct: 493 GRVIESEKLFDLMVRIGVKPDI--ITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCV 550
Query: 285 TLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREM 340
T +++I G R+ +A + E+E PDI Y+ +++GL + RR A +++ +
Sbjct: 551 TYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI 610
Query: 341 IKRGCEPTMHTYIMLLQG 358
+ G + + TY ++L G
Sbjct: 611 TESGTQLELSTYNIILHG 628
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 142/306 (46%), Gaps = 15/306 (4%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAE 120
+++ Q +++T+ ++ I+ KS ++ ++M RL + + + +L
Sbjct: 397 FSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCI 456
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIA 179
+ K M D G N ++ + C+ V+E++ L L + +KP+ I
Sbjct: 457 FDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIIT 516
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
Y LI GYC G + EA+K+ M G +P + +I + KI++ ++A+ +F
Sbjct: 517 YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLF---- 572
Query: 240 VKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
+ M+ G+S TY I++ + + + + A + + + G + + T + I++GL
Sbjct: 573 -REMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCK 631
Query: 296 RGRLREAYKVVEEIEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
EA ++ + + D+ L ++ +I LL++ R EA +F + G P + T
Sbjct: 632 NNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRT 691
Query: 352 YIMLLQ 357
Y ++ +
Sbjct: 692 YSLMAE 697
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 81/193 (41%), Gaps = 21/193 (10%)
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
L TY I+I C G++ + L + K+G D + + ++ GL A R +A +V
Sbjct: 91 LCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVL 150
Query: 308 EIEK-----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG--CEPTMHTYIMLLQGHL 360
P++ Y+ L+KGL R++EA ++ + M G C P + +Y ++ G
Sbjct: 151 RRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFF 210
Query: 361 GKRG-------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPR 407
K G +G P V + + L KA A + + ++ GV
Sbjct: 211 -KEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNC 269
Query: 408 FDYNKFLHYYSNE 420
YN +H Y +
Sbjct: 270 RTYNSIVHGYCSS 282
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 106/244 (43%), Gaps = 3/244 (1%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHI 133
IT++ ++D + +D + L M + D T+ + ++ ++ + F
Sbjct: 515 ITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFRE 574
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIA-YGWLIKGYCDVGD 192
M G + N +++ L Q + AK L + ++E E++ Y ++ G C
Sbjct: 575 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNL 634
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
EA +++ + + + MI K+ ++DEA +F + + + TY
Sbjct: 635 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVP-DVRTYS 693
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP 312
++ + + ++G + + + M + G A++ L+SI+ LL RG + A + I++
Sbjct: 694 LMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEK 753
Query: 313 DISL 316
SL
Sbjct: 754 HFSL 757
>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 498
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 139/294 (47%), Gaps = 15/294 (5%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVNFF 131
N + +N ++D + K + ++ ++ EM + D AL++ V +LK ++ F
Sbjct: 177 NVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLF 236
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDV 190
+ M + + N +V C+ + E K + + + + IKPN + Y L+ GYC V
Sbjct: 237 NKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLV 296
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
+ +A+ I+N M G P + MI F KI K DEAM +F+ M K + + T
Sbjct: 297 KQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIP-NVVT 355
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y +ID +CK GKIS A +++EM RG+ D +T SSI+ L ++ +A ++ +++
Sbjct: 356 YTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLK 415
Query: 311 KP------------DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
D+ Y +I+G EA + +M G P TY
Sbjct: 416 DQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTY 469
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 115/248 (46%), Gaps = 28/248 (11%)
Query: 171 EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDE 230
+ ++PN + Y +I C V + EA +++ M EG P + +I FF + K +
Sbjct: 172 KLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKD 231
Query: 231 AMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
A+ +F M ++ + + T+ I++D CK GK+ + T+ M K+GI+ + +T S++
Sbjct: 232 AIDLFNKMILENIKP-DVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLM 290
Query: 291 YGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
G ++ +A + + + PD Y+ +I G ++++ EA +F++M +
Sbjct: 291 DGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNII 350
Query: 347 PTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
P + TY T + GL K+GK A K V+ + +RGV
Sbjct: 351 PNVVTY-----------------------TSLIDGLCKSGKISYALKLVDEMHDRGVPPD 387
Query: 407 RFDYNKFL 414
Y+ L
Sbjct: 388 IITYSSIL 395
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 103/237 (43%), Gaps = 30/237 (12%)
Query: 210 PSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYT 269
P I K++ + KIN A+ + + M +K + L T I+I+ + G+ +++
Sbjct: 58 PPIFEFGKILGSLVKINCYHTAISLHRQMELKGIAS-NLVTLNILINCFSQLGQNPLSFS 116
Query: 270 MLEEMFKRGIEADNLTLSSIIYGLLAR-------------GRLREAYKVVEEIE----KP 312
+ + K+G + + +TL+++I GL + G+ R A +++ ++ +P
Sbjct: 117 VFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVDGKLVQP 176
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------------L 360
++ +Y+ +I + +++ EA ++ EM+ G P + TY L+ G
Sbjct: 177 NVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLF 236
Query: 361 GKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
K + P V I V G K GK + +M +G++ Y + Y
Sbjct: 237 NKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGY 293
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 83/187 (44%), Gaps = 10/187 (5%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAE 120
+ AQ ++ ++N M++ K + +D ++M + ++ N T+ + L +
Sbjct: 306 FNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCK 365
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWI------- 173
++ + M+D G + + ++ LC+ V +A L+ KL + +
Sbjct: 366 SGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVK 425
Query: 174 --KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEA 231
+ AY +I+G+C G EA + + M D G P + +I + FK +++D A
Sbjct: 426 GYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMA 485
Query: 232 MKVFQMM 238
K+ + M
Sbjct: 486 EKLLREM 492
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 166/378 (43%), Gaps = 25/378 (6%)
Query: 65 KAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRR-LVNDKTFKIALMTLAEVRE 123
K C ++I +N ++ K+++ ++ L EM + L T+ + L +
Sbjct: 69 KEMGCVPDDAI-YNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAER 127
Query: 124 LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGW 182
+ V M D GC ++ N +V+ LC+ + + EAK ++ +++ P+ + Y
Sbjct: 128 TRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNS 187
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
IKG C + EA K M P + +I K D A ++ M R
Sbjct: 188 FIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSASRMLDHMS-NR 243
Query: 243 MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
+ TY +ID CK G++ +A +L+ M K G + + +S++ L G + +A
Sbjct: 244 GCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKA 303
Query: 303 YKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
++ E+E+ PD+ Y+ I GL + R ++A VF M++RGC P +Y ML+
Sbjct: 304 EDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVD 363
Query: 359 HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPR-FDYNKFLHYY 417
L T+ + GL K G+ +A +V++ + P F YN L +
Sbjct: 364 IL-------------LYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSH 410
Query: 418 SNEEGVVMFEEVGKKLRE 435
+ ++ K++ E
Sbjct: 411 CKRRQIDKALQIHKQMLE 428
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 115/251 (45%), Gaps = 3/251 (1%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T+ L+ L K F M D C+ +++ LC+ + +A+ L+ ++
Sbjct: 9 TYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRM 68
Query: 170 SEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
E P++ Y LI GY D +A K M P++ +++ K +
Sbjct: 69 KEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERT 128
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
+A+K+ MR K + TY ++++ +C+ K+ +A MLEEM RG D +T +S
Sbjct: 129 RDAVKLLDEMRDKGCSP-NIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNS 187
Query: 289 IIYGLLARGRLREAYKVVEEIE-KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
I GL R+ EA K + + PD+ Y +I GL + A+++ M RGC P
Sbjct: 188 FIKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTP 247
Query: 348 TMHTYIMLLQG 358
+ TY L+ G
Sbjct: 248 DVVTYSSLIDG 258
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 143/300 (47%), Gaps = 17/300 (5%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+++ +++ + KS ++D L M R D T+ + + E+++ +
Sbjct: 215 VSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDS 274
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M GC ++ N ++ L + + +A+ +++++ P+ ++Y I G C
Sbjct: 275 MLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAER 334
Query: 193 LIEASKIWNLMTDEGFEP-----SIDVVDKMIETFF-----KINKDDEAMKVFQMMRVKR 242
+ +A +++ M + G P S+ +VD ++ T K + DEA +F + ++
Sbjct: 335 VKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEK 394
Query: 243 MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
+ + + Y +++D CKR +I +A + ++M ++ + +T + +++GL RL +A
Sbjct: 395 ICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNC-CNVVTWNILVHGLCVDDRLSDA 453
Query: 303 ----YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+V+E PD Y L+ + + ++ A ++F E +K GC P + TY L+ G
Sbjct: 454 ETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITG 513
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 18/213 (8%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLI----------KGYCDVGDLIE 195
N + LC+ + V +AK + ++ E PN +Y LI G C G E
Sbjct: 323 NACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDE 382
Query: 196 ASKIWNLMTDEGF-EPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIV 254
A +++ + DE EP + + M+++ K + D+A+++ + M K + T+ I+
Sbjct: 383 ACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNC--CNVVTWNIL 440
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK--- 311
+ +C ++S A TML M G D +T +++ + G+ A ++ EE K
Sbjct: 441 VHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGC 500
Query: 312 -PDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
PD+ Y LI GL+ A EA +F ++++R
Sbjct: 501 VPDVVTYSALITGLVHENMAEEAYLLFTKLVER 533
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 100/208 (48%), Gaps = 17/208 (8%)
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQ 266
G+E ++ +K++ + ++ D+A VFQ M K T+ I++ +C+ ++ +
Sbjct: 2 GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAF-TFAILLRGLCRSNQLEK 60
Query: 267 AYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIK 322
A +L M + G D+ +++I G +A+K + E+ K P + Y ++
Sbjct: 61 ARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVD 120
Query: 323 GLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR------------GRKGPDP 370
GL + R R+A ++ EM +GC P ++TY ++++G +R +G P
Sbjct: 121 GLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFP 180
Query: 371 LVNFDTIFVGGLVKAGKSLDAAKYVERV 398
V F+ GL K + +A K++ R+
Sbjct: 181 DVVTYNSFIKGLCKCDRVDEARKFLARM 208
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 19/177 (10%)
Query: 278 GIEADNLTLSSIIYGLLARGRLREAYKVVEE-IEK---PDISLYHGLIKGLLRLRRAREA 333
G E + T + ++ L R +A V +E I+K PD + L++GL R + +A
Sbjct: 2 GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61
Query: 334 TQVFREMIKRGCEPTMHTYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGG 381
++ M + GC P Y L+ G+ L + + P V T V G
Sbjct: 62 RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121
Query: 382 LVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
L KA ++ DA K ++ + ++G + YN + E +E K L E+ +
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERK---LDEAKKMLEEMAV 175
>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 588
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 157/337 (46%), Gaps = 56/337 (16%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKT------------FKIALMTLAE 120
N +T+ ++ + NI++ + QEM +ND + + I + L +
Sbjct: 195 NVVTYGTLIKGLCALGNINIALKWHQEM-----LNDTSPYVFNCRPNVISYSIIIDGLCK 249
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIA 179
V ++ + F+ M D G + ++ + ++ LC+ V++AK L+ + + I PN
Sbjct: 250 VGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFT 309
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMM 238
Y LIKG+C VGDL A +++ M +G+EP + + +I + K K +EAMK+F +M+
Sbjct: 310 YTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEML 369
Query: 239 RVKRMDDLGLS------------------TYRIV---------------IDWMCKRGKIS 265
V D+ S +R++ +D +CK G I
Sbjct: 370 HVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIF 429
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY----KVVEEIEKPDISLYHGLI 321
+A + E+ ++ D T +I GL G+L A+ K+ EE +PD Y +I
Sbjct: 430 EAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMI 489
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
G + + +A +F++M + GC P + TY +L++G
Sbjct: 490 HGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRG 526
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 148/326 (45%), Gaps = 46/326 (14%)
Query: 73 NSITFNRMVDIIGKSRN----IDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMV 128
N I+++ ++D + K N I LF E + + + +V TF + + L + ++ K
Sbjct: 236 NVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVV---TFSVLIDMLCKEGQVIKAK 292
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGY 187
+M G +L ++K C + AK L + + S+ +P+ I+Y LI GY
Sbjct: 293 KLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGY 352
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD-- 245
C + EA K++N M G P + +++ F K D+A ++F++++ M
Sbjct: 353 CKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDL 412
Query: 246 --------------------------------LGLSTYRIVIDWMCKRGKISQAYTMLEE 273
L + T+ +ID +CK GK+ A+ + E+
Sbjct: 413 CICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEK 472
Query: 274 MFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRR 329
+++ GI+ D + SS+I+G +G++ +A + +++E+ PD+ Y L++G +
Sbjct: 473 LYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNK 532
Query: 330 AREATQVFREMIKRGCEPTMHTYIML 355
+ Q+ MI++ P Y ++
Sbjct: 533 LEKVVQLLHRMIEKDVWPDDGIYAIV 558
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 142/316 (44%), Gaps = 31/316 (9%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK- 168
+F L LA++ ++ + + M+ G L LN ++ LC + E +
Sbjct: 93 SFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGI 152
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
+ P+ + + LIKG C +IEA+K++ M G P++ +I+ +
Sbjct: 153 MRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNI 212
Query: 229 DEAMKVFQMMRVKRMDDLG---------LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGI 279
+ A+K Q M ++D + +Y I+ID +CK G +A + EM +G+
Sbjct: 213 NIALKWHQEM----LNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGV 268
Query: 280 EADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQ 335
+ + +T S +I L G++ +A K++E + + P++ Y LIKG + A +
Sbjct: 269 QPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKE 328
Query: 336 VFREMIKRGCEPTMHTYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGLV 383
+F M +G EP + +Y ML+ G+ + G P V + + L
Sbjct: 329 LFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALF 388
Query: 384 KAGKSLDAAKYVERVM 399
AGK +D AK + RV+
Sbjct: 389 LAGK-VDDAKELFRVI 403
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 168/390 (43%), Gaps = 27/390 (6%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+T N +++ + I+ + + RR + D TF + L + + F
Sbjct: 127 LTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMR 186
Query: 134 MNDCGCEYSLEMLNKVVKTLCQ-RKLVVEAKY---LILKLSEWI---KPNEIAYGWLIKG 186
M GC ++ ++K LC + + K+ ++ S ++ +PN I+Y +I G
Sbjct: 187 MQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDG 246
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
C VG+ EA ++N M D+G +P++ +I+ K + +A K+ +MM ++
Sbjct: 247 LCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMM-IQIGIVP 305
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
L TY +I C G ++ A + M +G E D ++ + +I G ++ EA K+
Sbjct: 306 NLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLF 365
Query: 307 EEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
E+ PD+ L+K L + +A ++FR +IK P + L K
Sbjct: 366 NEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFR-VIKPYAMPKDLCICCIFLDGLCK 424
Query: 363 RG-----RKGPDPLVNFDT--------IFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFD 409
G K + L +++ + GL KAGK A + E++ G++
Sbjct: 425 NGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMA 484
Query: 410 YNKFLHYYSNEEGVVMFEEVGKKLREVGLA 439
Y+ +H + + V + +K+ E G +
Sbjct: 485 YSSMIHGFCKKGQVDKANILFQKMEENGCS 514
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 111/252 (44%), Gaps = 32/252 (12%)
Query: 188 CDVGDL--IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD 245
C G + +A + ++LM SI ++++ KI + +++ M + +
Sbjct: 70 CKTGSISVTQAHQFFDLMMR-----SIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWP 124
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
L T I+I+ +C +I++ + + +RG D +T +++I GL R+ EA K+
Sbjct: 125 -DLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKL 183
Query: 306 VEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKR------GCEPTMHTYIML 355
++K P++ Y LIKGL L A + +EM+ C P + +Y ++
Sbjct: 184 FMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSII 243
Query: 356 LQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
+ G L K G +G P V ++ + L K G+ + A K +E ++ G
Sbjct: 244 IDG-LCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIG 302
Query: 403 VEVPRFDYNKFL 414
+ F Y +
Sbjct: 303 IVPNLFTYTSLI 314
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 87/197 (44%), Gaps = 22/197 (11%)
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGL 320
SQ +++ ++M G+ D LTL+ +I L R+ E + I + PD+ + L
Sbjct: 108 SQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTL 167
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG-------------HLGKRGRKG 367
IKGL R EAT++F M K GC P + TY L++G H
Sbjct: 168 IKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTS 227
Query: 368 P-----DPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEG 422
P P V +I + GL K G +A ++++GV+ ++ + E
Sbjct: 228 PYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQ 287
Query: 423 VVMFEEVGKKLREVGLA 439
V+ +++ + + ++G+
Sbjct: 288 VIKAKKLLEMMIQIGIV 304
>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
Length = 708
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 101/436 (23%), Positives = 193/436 (44%), Gaps = 48/436 (11%)
Query: 11 VCTILYQQ---QYSPESRLHSSLSSCNFNLTHEFFLQICNNFP-LSWRPVYLFFQYTQKA 66
VC YQQ +++P +LH L S +LTH+ + + + + V L F Y
Sbjct: 70 VCQSYYQQTHVRFTP-PKLHLPLDS--ESLTHDQAITVVASLADEAGSMVALSFLYWAIG 126
Query: 67 QPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKK 126
P F H + + ++N++ E +Q M +M AE +LK+
Sbjct: 127 FPKFRHFMRLYIVSATALIGNKNLERANEVMQCM--------------VMNFAENGKLKE 172
Query: 127 MVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIK 185
VN M + G S + LN V+ LV A+ + +++ + + P+ +++ ++
Sbjct: 173 AVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVV 232
Query: 186 GYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD 245
C++G ++EA K N M + GF +I+ F + + + F +M +
Sbjct: 233 ACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFW-----KMVE 287
Query: 246 LGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
+GL+ + +I+ +CK+G I QA+ +LEEM +RG + + T +++I GL +G +
Sbjct: 288 MGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEK 347
Query: 302 AYK-----VVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
A++ V + KP++ Y +I G + + A + M ++G P +TY L+
Sbjct: 348 AFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLI 407
Query: 357 QGH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVE 404
GH + G++G P + + GL K G +A + + +V G++
Sbjct: 408 DGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQ 467
Query: 405 VPRFDYNKFLHYYSNE 420
Y + + +
Sbjct: 468 ADGVTYTILMSVHCRQ 483
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 149/336 (44%), Gaps = 29/336 (8%)
Query: 102 RRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVE 161
R +V++ T + + + + ++V +F M + G ++ ++ LC++ + +
Sbjct: 253 RGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQ 312
Query: 162 AKYLILKLSE--WIKPNEIAYGWLIKGYCDVGDLIEASKIW-NLMTDEGFEPSIDVVDKM 218
A L+ ++ W KPN + LI G C G +A +++ L+ +G++P++ M
Sbjct: 313 AFELLEEMVRRGW-KPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAM 371
Query: 219 IETFFKINKDDEAMKVFQMMRVKRMDDLGL----STYRIVIDWMCKRGKISQAYTMLEEM 274
I + K +K + A M + RM + GL +TY +ID CK G +AY +++ M
Sbjct: 372 INGYCKEDKLNRAE-----MLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLM 426
Query: 275 FKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRA 330
K G + T ++II GL +G L EAY+++ ++ + D Y L+ R
Sbjct: 427 GKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADT 486
Query: 331 REATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK------------GPDPLVNFDTIF 378
+ F +M+K G P +H+Y L+ ++ K G P T
Sbjct: 487 NRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSM 546
Query: 379 VGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
+ G + G + A K +R+ N G Y +
Sbjct: 547 ICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALI 582
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 52/279 (18%), Positives = 108/279 (38%), Gaps = 45/279 (16%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMV 128
F+ N T+N ++D + K ++D + L ++ L D T+ I + + + +
Sbjct: 431 FSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSL 490
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAK------------------------- 163
FF+ M G + ++ C++K + E++
Sbjct: 491 VFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGY 550
Query: 164 ------YLILKL-----SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSI 212
L +KL + P+ I YG LI G C L +A +++ M D+G P
Sbjct: 551 CRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPC- 609
Query: 213 DVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLE 272
V ++ + KDD + + + R+++ + T ++ +C GK+ A
Sbjct: 610 -EVTRLTLAYEYCKKDDSSTAINVLDRLEKRQ--WIRTVNTLVRKLCSEGKLDMAALFFH 666
Query: 273 EMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK 311
++ + + +TL G + + Y +V E+ +
Sbjct: 667 KLLDKEPNVNRVTL----LGFMNKCYESNKYGLVSELSE 701
>gi|297791089|ref|XP_002863429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297309264|gb|EFH39688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 472
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 118/252 (46%), Gaps = 7/252 (2%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
+ K + L L E +L F+ M + G ++ LN ++K LC+ V+A I
Sbjct: 120 SQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKI 179
Query: 167 LK--LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFK 224
P+ YG LI G C G + EA K++ M ++ P++ +I
Sbjct: 180 FHEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCG 239
Query: 225 INKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNL 284
DEAM+ + M+ K ++ + TY ++D +CK G+ QA + E M RG + +
Sbjct: 240 SKNVDEAMRYVEEMKGKGIEP-NVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMV 298
Query: 285 TLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREM 340
T +++I GL +++EA ++++ + KPD LY +I G + + REA EM
Sbjct: 299 TYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAVSKFREAANFLDEM 358
Query: 341 IKRGCEPTMHTY 352
I G P T+
Sbjct: 359 ILGGITPNRLTW 370
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 126/290 (43%), Gaps = 20/290 (6%)
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
++ ++G+++ A I M E S D++ + + ++++ ++++VF
Sbjct: 50 DQSSFGYMVSRLVSANKFKAAEDIVARMKIENCVVSEDILLSICRGYGRVHRPFDSLRVF 109
Query: 236 QMMRVKRMD-DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
M K D D Y V+ + + +++ A+ + M + G+ +L+ +I L
Sbjct: 110 HKM--KDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALC 167
Query: 295 AR-GRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
G + K+ E+ K PD Y LI GL R R EA ++F EM+++ C PT+
Sbjct: 168 RNDGTVDAGLKIFHEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTV 227
Query: 350 HTYIMLLQGHLGKRG------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVER 397
TY L+ G G + KG +P V + + GL K G+SL A + E
Sbjct: 228 VTYTSLINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEM 287
Query: 398 VMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLADIFQR 447
+M RG Y + E+ + E+ ++ GL A ++ +
Sbjct: 288 MMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGK 337
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 115/278 (41%), Gaps = 48/278 (17%)
Query: 128 VNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKG 186
+ FH M GC+ ++ LC+ + EAK L ++ E P + Y LI G
Sbjct: 177 LKIFHEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLING 236
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
C ++ EA + M +G EP++ +++ K + +AM++F+MM + R
Sbjct: 237 LCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMM-MARGCRP 295
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
+ TY +I +CK KI +A +L+ M +G++ D +I G A + REA +
Sbjct: 296 NMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAVSKFREAANFL 355
Query: 307 EEIEKPDIS------------------------------LY---------------HGLI 321
+E+ I+ LY L+
Sbjct: 356 DEMILGGITPNRLTWNIHVKTSNEVVRGLCTNYPSRAFTLYLSMRSRGISVEVETLDSLV 415
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
K L + ++A Q+ E++ GC P T+ +L+ GH
Sbjct: 416 KCLCKKGEFQKAVQLVDEIVTDGCIPNKGTWKLLI-GH 452
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 114/248 (45%), Gaps = 15/248 (6%)
Query: 73 NSITFNRMVDIIGKSRNID----LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMV 128
+S T+ ++ + + ID LF E +++ +V T+ + L + + + +
Sbjct: 191 DSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVV---TYTSLINGLCGSKNVDEAM 247
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGY 187
+ M G E ++ + ++ LC+ ++A L + ++ +PN + Y LI G
Sbjct: 248 RYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGL 307
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD--- 244
C + EA ++ + M +G +P + K+I F ++K EA M + +
Sbjct: 308 CKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAVSKFREAANFLDEMILGGITPNR 367
Query: 245 ---DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
++ + T V+ +C S+A+T+ M RGI + TL S++ L +G ++
Sbjct: 368 LTWNIHVKTSNEVVRGLCTNYP-SRAFTLYLSMRSRGISVEVETLDSLVKCLCKKGEFQK 426
Query: 302 AYKVVEEI 309
A ++V+EI
Sbjct: 427 AVQLVDEI 434
>gi|302142966|emb|CBI20261.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 97/419 (23%), Positives = 173/419 (41%), Gaps = 61/419 (14%)
Query: 9 VRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKA-- 66
+ V +L + S S + +L C +LT + L + WRP Y+FF + +
Sbjct: 88 LEVQNLLKTYRDSSVSEIEGALHQCRLSLTDDLVLDVLKRHRSDWRPAYVFFNWASRCGI 147
Query: 67 QPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRR-LVNDKTFKIALMTLAEVRELK 125
+ ++ N ++DI+G+ R + EM +R+ LVN++TF + L A + +
Sbjct: 148 ESGYSPGCGVHNEILDILGRMRRFHEMTQLFDEMSKRKGLVNERTFGVLLNRYAAAHKTE 207
Query: 126 KMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIK 185
+ VK +RK WI+ + ++
Sbjct: 208 EA---------------------AVKIFYKRK------------GAWIRSMNV----ILN 230
Query: 186 GYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD 245
G+C +G L EA + WN + +P I + K K A+K+FQ M K +
Sbjct: 231 GWCVLGSLREAKRFWNDIITSKCKPDKFTYGIFINSLTKAGKLSTAVKLFQAMWEKGCNP 290
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
++ +ID +C + +I +A +L EM +R + D T +S+I L R + Y++
Sbjct: 291 -DVAICNCIIDALCFKKRIPEALEVLREMNERDCQPDVATYNSLIKHLCKIQRFEKVYEL 349
Query: 306 VEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ---- 357
++++E+ P+ Y L+K ++ E + M + GC Y ++L+
Sbjct: 350 LDDMEQKGCLPNARTYGYLLKS---TKKPEEVPGILERMERNGCRMNSDCYNLILKLYMD 406
Query: 358 --------GHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG-VEVPR 407
L + R G P TI + GL G+ DA Y +++ G V PR
Sbjct: 407 WGYELKLRSTLDEMERNGMGPDQRTYTIMIHGLYDKGRMDDALSYFKQMTLMGMVPEPR 465
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 137/290 (47%), Gaps = 7/290 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHI 133
+T+N +V+ I K +D + L +M N T I L ++
Sbjct: 275 VTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLAD 334
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M G S+ N ++ LC++ L+ A ++ K+ + +PN ++Y L+ G+C
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKK 394
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ A + M G P I + M+ K K ++A+++ + K + L TY
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPV-LITYN 453
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
VID + K GK +A +L+EM + ++ D +T SS++ GL G++ EA K E E
Sbjct: 454 TVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERM 513
Query: 311 --KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+P+ ++ ++ GL + R+ A MI RGC+PT +Y +L++G
Sbjct: 514 GVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEG 563
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 118/263 (44%), Gaps = 20/263 (7%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+ I LI+G+C +G +A+KI ++ G P + + MI + K + + A+ V
Sbjct: 135 PDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSV 194
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
M V + TY ++ +C GK+ QA +L+ M +R D +T + +I
Sbjct: 195 LDRMSVSP----DVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATC 250
Query: 295 ARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
+ +A K+++E+ PD+ Y+ L+ G+ + R EA + +M GC+P +
Sbjct: 251 RDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVI 310
Query: 351 TYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERV 398
T+ ++L+ L RKG P V I + L + G A +E++
Sbjct: 311 THNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKM 370
Query: 399 MNRGVEVPRFDYNKFLHYYSNEE 421
G + YN LH + E+
Sbjct: 371 PKHGCQPNSLSYNPLLHGFCKEK 393
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 132/281 (46%), Gaps = 20/281 (7%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+ I Y +I GYC G++ A + + M+ P + + ++ + K +AM+V
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEV 226
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
M ++R + TY I+I+ C+ + QA +L+EM RG D +T + ++ G+
Sbjct: 227 LDRM-LQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 295 ARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
GRL EA K + ++ +P++ ++ +++ + R +A ++ +M+++G P++
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345
Query: 351 TYIMLL-----QGHLG-------KRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERV 398
T+ +L+ +G LG K + G P + G K K A +Y+ER+
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Query: 399 MNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLA 439
++RG YN L + V E+ +L G +
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCS 446
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 108/243 (44%), Gaps = 5/243 (2%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMV 128
F+ + +TFN +++ + + + + L++M + N ++ L + +++ + +
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAI 399
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGY 187
+ M GC + N ++ LC+ V +A ++ +LS + P I Y +I G
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD-DL 246
G +A K+ + M + +P ++ + K DEA+K F +RM
Sbjct: 460 AKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFH--EFERMGVRP 517
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
T+ ++ +CK + +A L M RG + + + +I GL G +EA +++
Sbjct: 518 NAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELL 577
Query: 307 EEI 309
E+
Sbjct: 578 NEL 580
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 63/136 (46%), Gaps = 2/136 (1%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
IT+N ++D + K+ + L EM + L D T+ + L+ ++ + + FFH
Sbjct: 450 ITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHE 509
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDVGD 192
G + N ++ LC+ + A +L+ ++ KP E +Y LI+G G
Sbjct: 510 FERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGM 569
Query: 193 LIEASKIWNLMTDEGF 208
EA ++ N + ++G
Sbjct: 570 AKEALELLNELCNKGL 585
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 127/277 (45%), Gaps = 28/277 (10%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDE 206
N+++K C+R + L L + P+ + Y LI G C G+ A ++ +LM D
Sbjct: 432 NELIKGYCKRNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDR 491
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQ 266
G P MI++ K + +EA +F + K + + Y +ID CK GK+++
Sbjct: 492 GLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIP-NVVMYTALIDGYCKAGKVNE 550
Query: 267 AYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIK 322
A+ MLE+M + ++LT +++I+GL G+L+EA + E++ K P +S LI
Sbjct: 551 AHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIH 610
Query: 323 GLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGL 382
LL+ A + F++M+ G +P HTY T F+
Sbjct: 611 RLLKDGDFDHAYRRFQQMLSSGTKPDAHTY-----------------------TTFIQTY 647
Query: 383 VKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN 419
+ G+ DA V ++ GV F Y+ + Y +
Sbjct: 648 CREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGD 684
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 181/423 (42%), Gaps = 57/423 (13%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEM---GRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
T+ ++ + +++D ++ +EM G RR N+ + + L R + + ++ F
Sbjct: 255 TYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRR--NEVAYTHLIHGLCVERRIDEAMDLFV 312
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVG 191
M D C ++ ++K LC + EA L+ ++ E IKPN Y LI C
Sbjct: 313 KMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQC 372
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM-------D 244
L +A ++ M ++G P++ + +I + K ++A+ V ++M + + +
Sbjct: 373 KLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYN 432
Query: 245 DL--------------------------GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRG 278
+L + TY +ID C+ G AY +L M RG
Sbjct: 433 ELIKGYCKRNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRG 492
Query: 279 IEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREAT 334
+ D T +S+I L R+ EA + + +E+ P++ +Y LI G + + EA
Sbjct: 493 LVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAH 552
Query: 335 QVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGP------------DPLVNFDTIFVGGL 382
+ +M+ + C P T+ L+ G K P V+ DTI + L
Sbjct: 553 LMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRL 612
Query: 383 VKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLA 442
+K G A + +++++ G + Y F+ Y E + E++ K++E G++
Sbjct: 613 LKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVS--P 670
Query: 443 DIF 445
D+F
Sbjct: 671 DLF 673
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 155/344 (45%), Gaps = 20/344 (5%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N+ T+N ++ K RN+ L +M R+++ D T+ +
Sbjct: 427 NTRTYNELIKGYCK-RNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDV 190
+MND G ++ +LC+ K V EA L L + + PN + Y LI GYC
Sbjct: 486 SLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKA 545
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G + EA + M + P+ + +I K EA + + M VK +ST
Sbjct: 546 GKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKM-VKIDLQPTVST 604
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
I+I + K G AY ++M G + D T ++ I GRL++A +V +++
Sbjct: 605 DTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMK 664
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG-KRGR 365
+ PD+ Y LIKG L R A V + M GCEP+ HT++ L++ L K G+
Sbjct: 665 ENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGK 724
Query: 366 -KGPDP-------LVNFDTI--FVGGLVKAGKSLDAAKYVERVM 399
KG +P ++ FD + + +V+ G + +A Y E++M
Sbjct: 725 VKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSY-EKLM 767
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 113/255 (44%), Gaps = 17/255 (6%)
Query: 179 AYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
Y L+ G + E +++ M ++ P+I +KM+ + K+ +EA + M+
Sbjct: 185 CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMI 244
Query: 239 RVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR 298
V+ D TY +I C+R + A+ + +EM +G + + + +I+GL R
Sbjct: 245 -VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERR 303
Query: 299 LREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIM 354
+ EA + +++ P + Y LIK L R EA + +EM ++G +P +HTY +
Sbjct: 304 IDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTV 363
Query: 355 LLQG------------HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
L+ LG+ KG P V + G K G DA VE + +R
Sbjct: 364 LIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRN 423
Query: 403 VEVPRFDYNKFLHYY 417
+ YN+ + Y
Sbjct: 424 LRPNTRTYNELIKGY 438
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 33/218 (15%)
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRK---------------------LVVEAKYLILKLSEW 172
M+D GCE S ++K L + K +VVE L+ K+ E
Sbjct: 698 MHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVE---LLEKMVEH 754
Query: 173 -IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD-EGFEPSIDVVDKMIETFFKINKDDE 230
+ PN +Y L+ G C++G+L A K+++ M EG PS V + ++ K+ K +E
Sbjct: 755 GVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNE 814
Query: 231 AMKVF-QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSI 289
A KV M+ V + L + +I+I + K+G+ + ++ + + + G D L I
Sbjct: 815 AAKVVDDMICVGHLPQ--LESCKILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKII 872
Query: 290 IYGLLARGRLREAYKVVEEIEKPDISL----YHGLIKG 323
I G+ +G + Y++ +EK + Y LI+G
Sbjct: 873 IDGVGKQGLVEAFYELFNVMEKNGCTFSSQTYSLLIEG 910
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 146/328 (44%), Gaps = 40/328 (12%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
N IT+N ++D + K R ++ EM + + N T+ + L + E K +
Sbjct: 213 NVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLM 272
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDV 190
+ M D ++ + +V LC+ +V A ++ + + ++P+ + Y L+ G+C
Sbjct: 273 NEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLR 332
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM------------ 238
++ EA K+++ M +G P++ +I + KI + D+AM +F+ M
Sbjct: 333 SEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTY 392
Query: 239 --------RVKRMDDL--------------GLSTYRIVIDWMCKRGKISQAYTMLEEMFK 276
V R+ D L TYRI++D++CK + QA ML+ +
Sbjct: 393 NTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEG 452
Query: 277 RGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRARE 332
+ D + + +I G+ G L A + + PD+ Y +I GL E
Sbjct: 453 SNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAE 512
Query: 333 ATQVFREMIKRGCEPTMHTYIMLLQGHL 360
AT++FREM GC P TY ++ +G L
Sbjct: 513 ATKLFREMNTDGCSPDDCTYNLITRGFL 540
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 145/319 (45%), Gaps = 25/319 (7%)
Query: 149 VVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEG 207
+++ LC + EA +L K+ E +PN + YG LI G C VG+ A ++ M +
Sbjct: 150 LIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKN 209
Query: 208 FEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQA 267
EP++ + +I+ FK + +EA+ +F M K + +STY +I +CK +
Sbjct: 210 CEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISP-NVSTYNSIIHGLCKFSEWKHV 268
Query: 268 YTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKG 323
T++ EM I + + ++++ L G + A+ VV+ + +PD+ Y L+ G
Sbjct: 269 ATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDG 328
Query: 324 LLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR-------------GRKGPDP 370
EA +VF M+++GC P + +Y L+ G+ + R+
Sbjct: 329 HCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPN 388
Query: 371 LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRF-DYNKFLHYYSNEEGVVMFEEV 429
+V ++T+ + GL G+ DA ++ G ++P Y L Y ++
Sbjct: 389 IVTYNTL-IHGLCHVGRLRDAIALFHEMVASG-QIPDLVTYRILLDYLCKTR---HLDQA 443
Query: 430 GKKLREVGLADLADIFQRY 448
L+ + ++LA Q Y
Sbjct: 444 MAMLKAIEGSNLAPDIQSY 462
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 136/291 (46%), Gaps = 7/291 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVR-ELKKMVNFF 131
N + F +VD + K + + + + M +R + D ALM +R E+ + F
Sbjct: 283 NVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVF 342
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
M GC ++ + ++ C+ + + +A YL ++ + + PN + Y LI G C V
Sbjct: 343 DTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHV 402
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G L +A +++ M G P + +++ K D+AM + + + + + +
Sbjct: 403 GRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAP-DIQS 461
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y IVID MC+ G++ A + + +G+ D T + +I GL +G L EA K+ E+
Sbjct: 462 YNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMN 521
Query: 311 ----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
PD Y+ + +G LR A Q+ +EM+ RG T ++++
Sbjct: 522 TDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVE 572
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 152/345 (44%), Gaps = 32/345 (9%)
Query: 111 FKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLV-----VEAKYL 165
F L ++A ++ +++ M+ G + L V+ + C V V AK
Sbjct: 77 FAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVLAK-- 134
Query: 166 ILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI 225
I KL +P+ + LI+G C G + EA +++ M EGF+P+ +I K+
Sbjct: 135 IFKLGH--QPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKV 192
Query: 226 NKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
A+++ + M V++ + + TY +ID + K ++++A + EM +GI + T
Sbjct: 193 GNSRAAIRLLRSM-VQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVST 251
Query: 286 LSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMI 341
+SII+GL + ++ E+ P++ ++ L+ L + A V MI
Sbjct: 252 YNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMI 311
Query: 342 KRGCEPTMHTYIMLLQGHLGKRG------------RKGPDPLVNFDTIFVGGLVKAGKSL 389
+RG EP + TY L+ GH + RKG P V + + G K + +
Sbjct: 312 QRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQR-I 370
Query: 390 DAAKYVERVMNRGVEVPRF-DYNKFLHYYSN----EEGVVMFEEV 429
D A Y+ M + VP YN +H + + + +F E+
Sbjct: 371 DKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEM 415
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 157/363 (43%), Gaps = 25/363 (6%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMV 128
F N +T+ ++ + K N L+ M ++ N T+ + L + R++ + +
Sbjct: 175 FQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEAL 234
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW----IKPNEIAYGWLI 184
N F M G ++ N ++ LC+ E K++ ++E I PN + + L+
Sbjct: 235 NIFSEMIAKGISPNVSTYNSIIHGLCKFS---EWKHVATLMNEMVDSKIMPNVVIFTTLV 291
Query: 185 KGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD 244
C G + A + ++M G EP + +++ ++ DEA KVF M V++
Sbjct: 292 DALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTM-VRKGC 350
Query: 245 DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK 304
+ +Y +I+ CK +I +A + EEM +R + + +T +++I+GL GRLR+A
Sbjct: 351 APNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIA 410
Query: 305 VVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH- 359
+ E+ + PD+ Y L+ L + R +A + + + P + +Y +++ G
Sbjct: 411 LFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMC 470
Query: 360 -----------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRF 408
KG P V TI + GL G +A K + G
Sbjct: 471 RVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDC 530
Query: 409 DYN 411
YN
Sbjct: 531 TYN 533
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 108/242 (44%), Gaps = 7/242 (2%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVN 129
A N I+++ +++ K + ID +EM +R LV N T+ + L V L+ +
Sbjct: 351 APNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIA 410
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYC 188
FH M G L ++ LC+ + + +A ++ + + P+ +Y +I G C
Sbjct: 411 LFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMC 470
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK--RMDDL 246
VG+L A +++ ++ +G P + MI EA K+F+ M DD
Sbjct: 471 RVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDD- 529
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
TY ++ + + A +L+EM RG AD T++ I+ L G + +++
Sbjct: 530 --CTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDGLDQSVKQIL 587
Query: 307 EE 308
E
Sbjct: 588 HE 589
>gi|18394846|ref|NP_564110.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174883|sp|Q9LN22.1|PPR54_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g20300, mitochondrial; Flags: Precursor
gi|9558596|gb|AAF88159.1|AC026234_10 Contains similarity to a hypothetical protein T3P18.15 gi|5454201
from Arabidopsis thaliana BAC T3P18 gb|AC005698 and
contains multiple PPR PF|01535 repeats [Arabidopsis
thaliana]
gi|17386104|gb|AAL38598.1|AF446865_1 At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|15450347|gb|AAK96467.1| At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|332191838|gb|AEE29959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 537
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 130/296 (43%), Gaps = 41/296 (13%)
Query: 77 FNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIMN 135
+N M+D+ GK R DL W + M R + ++ +TF I + + V+ F+ M
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 136 DCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIE 195
D GC + V+ L +++ EA+ L + +P+ I Y L++G+C G++ E
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISE 273
Query: 196 ASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVI 255
A K++ M G EP++ TY IVI
Sbjct: 274 AEKVFKEMKLAGIEPNV------------------------------------YTYSIVI 297
Query: 256 DWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK---- 311
D +C+ G+IS+A+ + +M G + +T ++++ + GR + +V +++K
Sbjct: 298 DALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCE 357
Query: 312 PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKG 367
PD Y+ LI+ R A +V MIK+ CE T+ + + KR G
Sbjct: 358 PDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNG 413
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 100/217 (46%), Gaps = 10/217 (4%)
Query: 71 AHNSITFNRMVDI---IGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRE--LK 125
A N+ITFN ++ + G++ + + ++++G T + A R+ L+
Sbjct: 322 APNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLG----CEPDTITYNFLIEAHCRDENLE 377
Query: 126 KMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLI 184
V + M CE + N + + + +++ V A + K+ E +PN + Y L+
Sbjct: 378 NAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILM 437
Query: 185 KGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD 244
+ + K+ M D+ EP+++ ++ F + + A K+F+ M ++
Sbjct: 438 RMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCL 497
Query: 245 DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEA 281
LS Y +V+ + + G++ + ++E+M ++G+ A
Sbjct: 498 TPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGLVA 534
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 49/243 (20%), Positives = 111/243 (45%), Gaps = 10/243 (4%)
Query: 73 NSITFNRMVDIIGK----SRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMV 128
N T++ ++D + + SR D+F + L N TF + + +K++
Sbjct: 289 NVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAP---NAITFNNLMRVHVKAGRTEKVL 345
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGY 187
++ M GCE N +++ C+ + + A K L + + + N + + +
Sbjct: 346 QVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYI 405
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
D+ A ++++ M + EP+ + ++ F D +K+ + M K ++
Sbjct: 406 EKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEP-N 464
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR-GRLREAYKVV 306
++TYR+++ C G + AY + +EM + +L+L ++ L R G+L++ ++V
Sbjct: 465 VNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELV 524
Query: 307 EEI 309
E++
Sbjct: 525 EKM 527
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 172/403 (42%), Gaps = 65/403 (16%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALM-TLAE 120
YT+ + + +TFN ++D + ++R L+EM + D+T LM E
Sbjct: 184 YTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVE 243
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKV------------------------------- 149
++ + M++ GC + +N +
Sbjct: 244 EGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVT 303
Query: 150 ----VKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
V LCQ V A K L L L E +P+ Y +I C+ G+L EA I N M
Sbjct: 304 FSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMV 363
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
D G P + +I N+ +EA+ + + + VK + + T+ I+I+ +CK G
Sbjct: 364 DSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSP-NVYTFNILINALCKVGDP 422
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK---PDISL-YHGL 320
A + EEM G D +T + +I L + G+L +A +++E+E P ++ Y+ +
Sbjct: 423 HLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTI 482
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVG 380
I GL + RR EA +VF +M G GR + F+T+ +
Sbjct: 483 IDGLCKRRRIEEAEEVFDQMDVTGI------------------GRNA----ITFNTL-ID 519
Query: 381 GLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGV 423
GL A + DAA+ V+++++ G++ YN L +Y + +
Sbjct: 520 GLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNI 562
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 157/358 (43%), Gaps = 22/358 (6%)
Query: 7 HLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKA 66
H ++V ++ Q+ P+ +S++ +C +CNN L +
Sbjct: 319 HALKVLGLMLQEGCEPDVYTYSTVINC-----------LCNNGELEEAKGIVNQMVDSGC 367
Query: 67 QPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELK 125
P ++ TFN ++ + ++ + +E+ + L N TF I + L +V +
Sbjct: 368 LP----DTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPH 423
Query: 126 KMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKP-NEIAYGWLI 184
V F M GC N ++ LC + +A L+ ++ P + + Y +I
Sbjct: 424 LAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTII 483
Query: 185 KGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD 244
G C + EA ++++ M G + + +I+ + D+A ++ M + +
Sbjct: 484 DGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQ 543
Query: 245 DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK 304
+ TY ++ CK+G IS+A +L+ M G E D +T +++I GL R + A K
Sbjct: 544 PNNV-TYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALK 602
Query: 305 VVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
++ + KP Y+ +I+ L R R+A +FREM + G P TY ++ +G
Sbjct: 603 LLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRG 660
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 158/377 (41%), Gaps = 24/377 (6%)
Query: 106 VNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYL 165
N + + L LAE ++K + + + M+ G E + N V+ LC+ + +A+
Sbjct: 159 ANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRAR---QARTA 215
Query: 166 ILKLSEW----IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIET 221
+L L E + P+E + L++G+ + G + A ++ M++ G P+ V+ +I
Sbjct: 216 VLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLING 275
Query: 222 FFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEA 281
+ K+ + +A+ Q + + T+ ++ +C+ G + A +L M + G E
Sbjct: 276 YCKLGRVGDALGYIQ-QEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEP 334
Query: 282 DNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVF 337
D T S++I L G L EA +V ++ PD + ++ LI L + EA +
Sbjct: 335 DVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLA 394
Query: 338 REMIKRGCEPTMHTYIMLLQG-------HLGKR-----GRKGPDPLVNFDTIFVGGLVKA 385
RE+ +G P ++T+ +L+ HL R G P I + L +
Sbjct: 395 RELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSS 454
Query: 386 GKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLADIF 445
GK A ++ + G YN + + EEV ++ G+ A F
Sbjct: 455 GKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITF 514
Query: 446 QRYGKKMATRERRRNRA 462
+ ER + A
Sbjct: 515 NTLIDGLCNAERIDDAA 531
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 121/300 (40%), Gaps = 43/300 (14%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMV 128
+ N TFN +++ + K + L +EM D+ T+ I + L +L K +
Sbjct: 402 LSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKAL 461
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL------------------- 169
+ M GC S N ++ LC+R+ + EA+ + ++
Sbjct: 462 DLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGL 521
Query: 170 -----------------SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSI 212
SE ++PN + Y ++ YC G++ +A+ I MT GFE +
Sbjct: 522 CNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDV 581
Query: 213 DVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLE 272
+I K + A+K+ + MR+K M Y VI + + A ++
Sbjct: 582 VTYATLINGLCKARRTQAALKLLRGMRMKGMKPTP-KAYNPVIQSLFRGNNGRDALSLFR 640
Query: 273 EMFKRGIEADNLTLSSIIYGLL-ARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRL 327
EM + G D T + GL G ++EA+ + E+ P+ S + L +GLL L
Sbjct: 641 EMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAEGLLNL 700
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 111/494 (22%), Positives = 199/494 (40%), Gaps = 101/494 (20%)
Query: 34 NFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLF 93
+F+ FL+ C ++ + FF ++ P +S FNR++ + K +
Sbjct: 53 SFHHPLSLFLRNCKTGNITAIQAFHFFDLMMRSHPIPPISS--FNRLLGGLAKINHYSQL 110
Query: 94 WETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKT 152
+ EM L D T I L V + + + + G ++ ++K
Sbjct: 111 FSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKG 170
Query: 153 LCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFE-- 209
LC + EA L L++ + PN + YG LIKG C G++ A K+ M ++ +
Sbjct: 171 LCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYG 230
Query: 210 ----PSIDVVDKMIETFFKINKDDEAMKVFQMMRVK------------------------ 241
P + +I+ K+ ++DEA ++F+ M+ +
Sbjct: 231 VNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQ 290
Query: 242 ------RMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
M D G+ T+ ++ID +CK GK+++A +LE M +RGI + +T +S+I
Sbjct: 291 SKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLID 350
Query: 292 GLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
G G L A ++ + +PD Y LI G + + +EA ++ EM++ G P
Sbjct: 351 GFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSP 410
Query: 348 TMHTYIMLLQGHLGKRGRKGP------------------------DPLVNFDTIF----- 378
+ TY LL+G L ++G+ G D L D +F
Sbjct: 411 NVTTYGTLLKG-LFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMEL 469
Query: 379 -------------------VGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN 419
+ GL KAGK A + E++ G++ YN +H +
Sbjct: 470 FNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCK 529
Query: 420 ----EEGVVMFEEV 429
+ ++FE++
Sbjct: 530 VGQVDNANILFEKM 543
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 124/258 (48%), Gaps = 14/258 (5%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
TF + + TL + ++ + +M G +L N ++ C + A+ L L +
Sbjct: 309 TFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSM 368
Query: 170 -SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
S+ ++P+EI+Y LI GYC + EA ++N M G P++ +++ F+ K
Sbjct: 369 PSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKV 428
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEM----FKRGIEADNL 284
+A K+F +M+ + Y I +D +CK + +A + E+ FK IE
Sbjct: 429 GDAKKLFGVMKTYGVSA-NSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIE---- 483
Query: 285 TLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREM 340
S +I GL G+L A+++ E++ +PD+ Y+ +I G ++ + A +F +M
Sbjct: 484 NYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKM 543
Query: 341 IKRGCEPTMHTYIMLLQG 358
+ GC P + Y LL G
Sbjct: 544 EENGCTPDIIAYNTLLCG 561
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 117/245 (47%), Gaps = 3/245 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N IT+N ++D +++ E M + L D+ ++ + + ++K+ +N +
Sbjct: 341 NLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLY 400
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDV 190
+ M G ++ ++K L Q+ V +AK L + + + N YG + G C
Sbjct: 401 NEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKN 460
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
L EA +++N + F+ +I+ +I+ K K + A ++F+ + + + + T
Sbjct: 461 DCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQP-DVVT 519
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y I+I CK G++ A + E+M + G D + ++++ G +L E K++ ++
Sbjct: 520 YNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMV 579
Query: 311 KPDIS 315
+ D+S
Sbjct: 580 QKDVS 584
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 140/289 (48%), Gaps = 13/289 (4%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRR----RLVNDKTFKIALMTLAEVRELKKMV 128
N +TFN ++D K +N+ + EM R+ +V + L +V E +
Sbjct: 235 NEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALR 294
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGY 187
+ ++N C + ++ N ++ C+ K+V +A L + + I PN Y LI Y
Sbjct: 295 D--QMVNSC-LKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAY 351
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C ++ +A ++ +M +G P + + +I + + A + M K +
Sbjct: 352 CKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLK-AD 410
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
L TY I+ID +C +G++ +A +L+EM ++G++ LT +++I G G LR A +
Sbjct: 411 LITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRS 470
Query: 308 EIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
++EK +++ Y+ LIKG + + +A + EM+++G P TY
Sbjct: 471 QMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTY 519
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 157/373 (42%), Gaps = 65/373 (17%)
Query: 98 QEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQR 156
+EM RRR+ +F I + L +V +L K + M G ++ N ++ C+
Sbjct: 152 KEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKM 211
Query: 157 KLV---VEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSI 212
+ +A ++ ++ ++ I PNE+ + LI G+C ++ A K++ M +G +P++
Sbjct: 212 GKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNV 271
Query: 213 DVVDKMIETFFKINKDDEAMKVFQMM-----------------------RVKRMDDL--- 246
+ +I K +EA + M VK+ +L
Sbjct: 272 VTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDD 331
Query: 247 --------GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR 298
++TY I+ID CK + A+ + M +G+ D T + +I GL +G
Sbjct: 332 MPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGD 391
Query: 299 LREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIM 354
L A +V E++ K D+ Y+ LI L ++A ++ EM ++G +P+ TY
Sbjct: 392 LEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNT 451
Query: 355 LLQGH---------------LGKRGRKGPDPLVNFDT--IFVGGLVKAGKSLDAAKYVER 397
++ G+ + K GR L N T + + G K K DA +
Sbjct: 452 MIDGYCKEGNLRAALNLRSQMEKVGR-----LANVATYNVLIKGFCKKDKLEDANGLLNE 506
Query: 398 VMNRGVEVPRFDY 410
++ +G+ R Y
Sbjct: 507 MLEKGLIPNRMTY 519
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 90/183 (49%), Gaps = 8/183 (4%)
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
L+ G VG++ + ++ M EP++ + +I K+ K ++A + + M+V+
Sbjct: 134 LMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRG 193
Query: 243 MDDLGLSTYRIVIDWMCKRGKISQAY---TMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
+ + TY +ID CK GKI + Y +L+EM GI + +T + +I G +
Sbjct: 194 V-SANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNV 252
Query: 300 REAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
A KV E+ KP++ Y+ LI GL + EAT + +M+ +P + T+ L
Sbjct: 253 SAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNAL 312
Query: 356 LQG 358
L G
Sbjct: 313 LNG 315
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 116/237 (48%), Gaps = 5/237 (2%)
Query: 64 QKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVR 122
Q C N IT N +++ K++ + E +M ++ + N T+ I + +
Sbjct: 296 QMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDE 355
Query: 123 ELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYG 181
++ + IM G + N ++ LC++ + A+ L+ ++ ++ +K + I Y
Sbjct: 356 NMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYN 415
Query: 182 WLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV-FQMMRV 240
LI C+ G++ +A ++ + M +G +PS + MI+ + K A+ + QM +V
Sbjct: 416 ILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKV 475
Query: 241 KRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
R+ ++ +TY ++I CK+ K+ A +L EM ++G+ + +T + ++ +G
Sbjct: 476 GRLANV--ATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKG 530
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 91/162 (56%), Gaps = 8/162 (4%)
Query: 204 TDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGK 263
+D G + S+ + ++ K+ + + V++ M ++R + L ++ IVI+ +CK GK
Sbjct: 120 SDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEM-IRRRIEPTLISFNIVINGLCKVGK 178
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK---VVEEIEK----PDISL 316
+++A ++E+M RG+ A+ +T +++I G G++ + YK +++E+ P+
Sbjct: 179 LNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVT 238
Query: 317 YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
++ LI G + + A +VF EM ++G +P + TY L+ G
Sbjct: 239 FNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLING 280
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 133/285 (46%), Gaps = 24/285 (8%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
L +P+ + L+KG + +A ++++ MT++G +I K K
Sbjct: 69 LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKT 128
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
A+K+ + M+ D+ TY ++ID +CK G ++A M EM GI D + SS
Sbjct: 129 GLAIKLHEKMKGNCKGDV--FTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSS 186
Query: 289 IIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
++ GL GRL+EA + +E+E D+ Y+ LI GL R +E T M+ RG
Sbjct: 187 LMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRG 246
Query: 345 CEPTMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDA 391
P T+ +L+ G L K G+ KG +P + + GL G+ DA
Sbjct: 247 FSPDAFTFTILIDG-LCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDA 305
Query: 392 AKYVERVMNRGVEVPRFDYNKFLHYYSN----EEGVVMFEEVGKK 432
K E + +RG+++ F YN ++ Y +E +FEE+ K
Sbjct: 306 TKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPK 350
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 153/351 (43%), Gaps = 30/351 (8%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVNFFHIM 134
T+ ++D + K + EM ++ D +LM L LK+ + FF M
Sbjct: 148 TYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEM 207
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGDL 193
G + N ++ L + L E + + L + P+ + LI G C G +
Sbjct: 208 EGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKV 267
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
EA +I LM +G EP I + ++ + + ++A K+F+ + R L + +Y I
Sbjct: 268 GEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESL-ADRGIKLNVFSYNI 326
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPD 313
+I+ CK KI +A+ + EEM +G++ +T +++I L GR+R A K+ E++
Sbjct: 327 LINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCG 386
Query: 314 ----ISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPD 369
+S Y L+ GL + EA +F+ + K +P + + +LL G
Sbjct: 387 QFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDG----------- 435
Query: 370 PLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE 420
+ +AGK +A K + + G+E YN ++ N+
Sbjct: 436 ------------MCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNK 474
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 138/302 (45%), Gaps = 9/302 (2%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMV 128
F +++T +V + I + EM + L D KT+ I + L + R+ +
Sbjct: 73 FEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAI 132
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGY 187
M C+ + ++ +LC+ + EA + ++ I P+ + Y L+ G
Sbjct: 133 KLHEKMKG-NCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGL 191
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C G L EA + + M G + + +I + E +M V R
Sbjct: 192 CRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLM-VDRGFSPD 250
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
T+ I+ID +CK GK+ +A +LE M +G E D LT ++++ GL G+L +A K+ E
Sbjct: 251 AFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFE 310
Query: 308 EIEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
+ I L Y+ LI G + ++ EA ++F EM +G +P+ TY L+ G L +
Sbjct: 311 SLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLI-GALCQS 369
Query: 364 GR 365
GR
Sbjct: 370 GR 371
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 144/310 (46%), Gaps = 9/310 (2%)
Query: 53 WRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTF 111
W+ V F F+ ++ TF ++D + K + + L+ M + D T+
Sbjct: 232 WKEVTWFLNLM--VDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTY 289
Query: 112 KIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-S 170
+ L V +L+ F + D G + ++ N ++ C+ + + EA L ++
Sbjct: 290 NTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRP 349
Query: 171 EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDE 230
+ +KP+ + Y LI C G + A K++ M G + +++ K +E
Sbjct: 350 KGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEE 409
Query: 231 AMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
A+ +FQ ++ K + + I++D MC+ GK+ +A+ +E+ K G+E D + + +I
Sbjct: 410 AIDLFQSIK-KTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILI 468
Query: 291 YGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
GL +G L EA K++ ++E+ PD ++ +I+ LL+ EA Q+ EM R
Sbjct: 469 NGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFS 528
Query: 347 PTMHTYIMLL 356
P MLL
Sbjct: 529 PDEAVTSMLL 538
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 140/294 (47%), Gaps = 7/294 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHI 133
+ ++ ++D + + + E +EM R + D T+ + L+ K++ F ++
Sbjct: 182 VVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNL 241
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGD 192
M D G ++ LC+ V EA+ ++ L + +P+ + Y L+ G C VG
Sbjct: 242 MVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQ 301
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
L +A+K++ + D G + ++ + +I + K K DEA ++F+ MR K + TY
Sbjct: 302 LEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKP-STVTYN 360
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK- 311
+I +C+ G++ A + EM G T ++ GL G L EA + + I+K
Sbjct: 361 TLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKT 420
Query: 312 ---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
P+I ++ L+ G+ R + EA + F E+ K G EP Y +L+ G K
Sbjct: 421 EHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNK 474
>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 789
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 147/316 (46%), Gaps = 10/316 (3%)
Query: 56 VYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIA 114
V L F Y Q ++H+ + + ++D++ K++ L+ M RR + ++ + F
Sbjct: 178 VALNFFYWADRQWRYSHHPLVYYTLLDVLSKTKLCQGARRVLRLMTRRGIELSPEAFGCV 237
Query: 115 LMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQR-KLVVEAKYLILKLSEWI 173
+++ + +L+ + +M G E +L + N + L + KL ++L I
Sbjct: 238 MVSYSRAGKLRNALRVLTLMQKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGI 297
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
KP+ + Y LIKGYCD+ + +A ++ + +G P V + F K E +K
Sbjct: 298 KPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPD-KVSYYTVMGFLCKEKKIEQVK 356
Query: 234 VFQMMRVKRMDDL-GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
V+ + + TY +I + K G A L+E +G D + S+I++
Sbjct: 357 CLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHS 416
Query: 293 LLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
+GR+ EA +V ++ PD+ Y ++ G RL R EA ++ ++M K GC+P
Sbjct: 417 FCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPN 476
Query: 349 MHTYIMLLQG--HLGK 362
+Y LL G H GK
Sbjct: 477 TVSYTALLNGLCHSGK 492
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 141/315 (44%), Gaps = 38/315 (12%)
Query: 149 VVKTLCQRKLVVEAKYLILKLSE--WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDE 206
V+ LC+ K + + K L+ K+ + + P+++ Y LI G +A D+
Sbjct: 342 VMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDK 401
Query: 207 GFEPSIDVV--DKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
GF ID V ++ +F + + DEA + M R + + TY ++D C+ G+I
Sbjct: 402 GFH--IDKVGYSAIVHSFCQKGRMDEAKSLVIDM-YSRSCNPDVVTYTAIVDGFCRLGRI 458
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGL 320
+A ML++M+K G + + ++ ++++ GL G+ EA +++ E+ P+ Y +
Sbjct: 459 DEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVV 518
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVG 380
+ G R + EA + REM+++G PT +L+Q
Sbjct: 519 MHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQ----------------------- 555
Query: 381 GLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN----EEGVVMFEEVGKKLREV 436
L + K ++A KY+E +N+G + ++ +H + E + + E++ +
Sbjct: 556 SLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHP 615
Query: 437 GLADLADIFQRYGKK 451
+F GKK
Sbjct: 616 DAVTYTALFDALGKK 630
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 106/225 (47%), Gaps = 13/225 (5%)
Query: 146 LNKVVKTLCQRKLVVEAK-YLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
+N ++++LCQ + VVEAK YL L++ N + + +I G+C +GD+ A + M
Sbjct: 550 INLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMY 609
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
P + + K + DEA ++ M K +D + T+R VI C+ G++
Sbjct: 610 LSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPV-TFRSVIHRYCQWGRV 668
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGL 320
+L+ M KR + + +I L G L EA K++ ++ K D + H L
Sbjct: 669 DDMLNLLDRMVKR--KPFRTIYNHVIEKLCDFGNLEEAEKLLGKVLRTASKLDANTCHVL 726
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMH-----TYIMLLQGHL 360
++ L+ A A +V +M +R P + T ++L G+L
Sbjct: 727 MESCLKKGVALSAYKVACQMFRRNLTPDLKLCEKVTKKLVLDGNL 771
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 145/337 (43%), Gaps = 54/337 (16%)
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPN 176
L + E KKM+ M GC+ + ++ LC +EA+ +I + W PN
Sbjct: 455 LGRIDEAKKML---QQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPN 511
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
I YG ++ G+ G L EA + M ++GF P+ ++ +I++ + K EA K +
Sbjct: 512 AITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLE 571
Query: 237 M---------------------------MRVKRMDDLGLS-------TYRIVIDWMCKRG 262
+ ++D+ LS TY + D + K+G
Sbjct: 572 ECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKG 631
Query: 263 KISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI--EKPDISLYHGL 320
++ +A ++ +M +G++ +T S+I+ GR+ + +++ + KP ++Y+ +
Sbjct: 632 RLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDRMVKRKPFRTIYNHV 691
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG-------------RKG 367
I+ L EA ++ ++++ + +T +L++ L K+G R+
Sbjct: 692 IEKLCDFGNLEEAEKLLGKVLRTASKLDANTCHVLMESCL-KKGVALSAYKVACQMFRRN 750
Query: 368 PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVE 404
P + LV G ++A K + R + RG++
Sbjct: 751 LTPDLKLCEKVTKKLVLDGNLVEADKLMLRFVERGIQ 787
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 231 AMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
A +V ++M +R +L + V+ + GK+ A +L M K G+E + ++ I
Sbjct: 215 ARRVLRLM-TRRGIELSPEAFGCVMVSYSRAGKLRNALRVLTLMQKAGVEPNLSICNTTI 273
Query: 291 YGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
Y L+ +L +A + +E ++ KPDI Y+ LIKG L R +A ++ + +GC
Sbjct: 274 YVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCP 333
Query: 347 PTMHTYIMLLQGHLGKRGRKG----------------PDPLVNFDTIFVGGLVKAGKSLD 390
P +Y ++ G L K + PD V ++T+ + L K G + D
Sbjct: 334 PDKVSYYTVM-GFLCKEKKIEQVKCLMEKMVQDSNLIPDQ-VTYNTL-IHMLSKHGHADD 390
Query: 391 AAKYVERVMNRGVEVPRFDYNKFLHYY 417
A +++ ++G + + Y+ +H +
Sbjct: 391 ALAFLKEAEDKGFHIDKVGYSAIVHSF 417
>gi|15219049|ref|NP_175673.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207559|sp|Q9SSR6.1|PPR78_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g52640, mitochondrial; Flags: Precursor
gi|5903042|gb|AAD55601.1|AC008016_11 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana]
gi|45773940|gb|AAS76774.1| At1g52640 [Arabidopsis thaliana]
gi|62320530|dbj|BAD95108.1| hypothetical protein [Arabidopsis thaliana]
gi|332194712|gb|AEE32833.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/408 (22%), Positives = 183/408 (44%), Gaps = 49/408 (12%)
Query: 2 PVDPGHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQI---CNNFPLSWRPVYL 58
P P + + +L + +P+ L +L + + ++ Q+ C N P +
Sbjct: 32 PPSPDLVNEISRVLSDHR-NPKDDLEHTLVAYSPRVSSNLVEQVLKRCKNLGF---PAHR 87
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL--VNDKTFKIALM 116
FF + ++ P FAH+ +++ +V+I+G S+ L W+ L E ++ K F I
Sbjct: 88 FFLWARRI-PDFAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFR 146
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKP 175
+ + F+ M + G + ++ L++++ +LC +K V A+ K + I P
Sbjct: 147 AYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVP 206
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
+ Y L++G+ + D A K+++ M + + + +++ K D K+F
Sbjct: 207 SAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMF 266
Query: 236 QMM---------------------------------RVKRMDDL-GLSTYRIVIDWMCKR 261
Q M R+KR D + + T+ +I +CK
Sbjct: 267 QEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKN 326
Query: 262 GKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLY 317
K+ AY +L+EM ++G D T +SI+ + A K++ +++ PD Y
Sbjct: 327 EKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTY 386
Query: 318 HGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
+ ++K L+R+ R AT+++ M +R PT+ TY +++ G + K+G+
Sbjct: 387 NMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGK 434
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 153/351 (43%), Gaps = 30/351 (8%)
Query: 31 SSCNFNLTHEFFLQI--CNNFPLSWRPVYLFFQ-YTQKAQPCFAHNSITFNRMVDIIGKS 87
SS F L +F ++ N F +S + ++ F+ Y++ P A + FNRMV+ G
Sbjct: 114 SSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRA--FNRMVEF-GIK 170
Query: 88 RNIDLFWETLQEMGRRRLVND-----------------KTFKIALMTLAEVRELKKMVNF 130
+D + L + ++ VN KT+ I + A +R+
Sbjct: 171 PCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKV 230
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCD 189
F M + C L N ++ LC+ V + ++ +KP+ ++ I YCD
Sbjct: 231 FDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCD 290
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
GD+ A K+ + M P++ + +I+T K K D+A + M +++ +
Sbjct: 291 AGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEM-IQKGANPDTW 349
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
TY ++ + C ++++A +L M + D T + ++ L+ GR A ++ E +
Sbjct: 350 TYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGM 409
Query: 310 EK----PDISLYHGLIKGLLRLR-RAREATQVFREMIKRGCEPTMHTYIML 355
+ P ++ Y +I GL+R + + EA + F MI G P T ML
Sbjct: 410 SERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEML 460
>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
Length = 742
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 168/373 (45%), Gaps = 44/373 (11%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMG-RRRLVNDKTFKIALMTLAEVRELKKMVNFF 131
N IT+N M+ K ++ ++M L+N +++ I L+ L + +L +
Sbjct: 199 NIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVL 258
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDV 190
M D G E ++ N V+ LC+ ++ +A+ L+ L S + P+ + Y L+ GYC
Sbjct: 259 KEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHT 318
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G + EA+ + M +G P+ + ++ + +K + EA ++ Q M K + T
Sbjct: 319 GKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGY-VIDTVT 377
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEA-----------------------DNLTLS 287
IVID +C GK+ +A ++ M+ G A D ++ S
Sbjct: 378 CNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYS 437
Query: 288 SIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
+II GL GR+ EA K E+ +PD ++Y I + + A +V ++M K+
Sbjct: 438 TIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKK 497
Query: 344 GCEPTMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLD 390
GC T+ TY L+ G LG + + +G P V+ + L + G+ D
Sbjct: 498 GCNKTLQTYNSLIMG-LGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKD 556
Query: 391 AAKYVERVMNRGV 403
A ++ ++ +G+
Sbjct: 557 APSVLDEMLQKGI 569
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 142/314 (45%), Gaps = 24/314 (7%)
Query: 146 LNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
N ++ LC + +A+ L K+ E +PNE ++G L++GYC G + ++ M
Sbjct: 59 FNVLIGLLCDSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMR 118
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
GF P+ V + +I +F K K D+A K+ MR + + T+ I +C GK+
Sbjct: 119 RLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSP-DVVTFNARISALCSSGKV 177
Query: 265 SQAYTMLEEMFKR---GIEADN-LTLSSIIYGLLARGRLREAYKVVEEIEKPDISL---- 316
+A + +M G+ N +T + ++ G G L EA + E+++ + +
Sbjct: 178 LEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRES 237
Query: 317 YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG------------ 364
Y+ + GL+R+ + EA V +EM+ G EP +++Y +++ G L K G
Sbjct: 238 YNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDG-LCKNGVLFDARMLMRLM 296
Query: 365 -RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGV 423
G P T + G GK +A + +M G + N L+ E +
Sbjct: 297 TSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRI 356
Query: 424 VMFEEVGKKLREVG 437
EE+ +K+ E G
Sbjct: 357 SEAEELLQKMNEKG 370
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 186/418 (44%), Gaps = 37/418 (8%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKI---ALMTLAEVRELK 125
F+ N + +N ++ K D + + EM + L D TF AL + +V E
Sbjct: 122 FSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEAS 181
Query: 126 KMVNFFHIMNDCGC-EYSLEMLNKVVKTLCQRKLVVEAKYLI--LKLSEWIKPNEIAYGW 182
++ I G + ++ N ++ C+ ++ EA+ L +K+SE + E W
Sbjct: 182 RIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIW 241
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
L+ G +G L+EA + M D G EP++ + +++ K +A + ++M
Sbjct: 242 LL-GLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSG 300
Query: 243 M--DDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
+ D + TY ++ C GK+S+A +L EM + G +N T + ++Y L GR+
Sbjct: 301 VLPDTV---TYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRIS 357
Query: 301 EAYKVVEEIEKP----DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH---TYI 353
EA ++++++ + D + +I GL + +A ++ M G + +YI
Sbjct: 358 EAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYI 417
Query: 354 MLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
L+ R + PD L+++ TI + GL KAG+ +A K +M + ++ Y+ F
Sbjct: 418 GLVDDS-DSRKKCMPD-LISYSTI-ISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVF 474
Query: 414 LHYYSNEEGVVMFEEVGKKLRE--------------VGLADLADIFQRYGKKMATRER 457
+H + E + V K + + +GL IF+ YG RER
Sbjct: 475 IHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRER 532
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 149/356 (41%), Gaps = 50/356 (14%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T+ L ++ + N M GC + N ++ +L + + EA+ L+ K+
Sbjct: 307 TYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKM 366
Query: 170 SE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFE------------------- 209
+E + + +I G C+ G L +A +I N M G
Sbjct: 367 NEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSR 426
Query: 210 ----PSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKIS 265
P + +I K + EA K F M K + + Y + I CK GKIS
Sbjct: 427 KKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQP-DSAIYDVFIHSFCKEGKIS 485
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLI 321
A+ +L++M K+G T +S+I GL ++ ++ E Y +++E+ + PD+S+Y+ ++
Sbjct: 486 SAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVL 545
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG----------------HLGKRGR 365
L R ++A V EM+++G P + ++ +L++ L G
Sbjct: 546 SSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGH 605
Query: 366 KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEE 421
K + F+ + VGG V K L E ++R +V F Y + + +E
Sbjct: 606 KEALYSLTFNELLVGGEVVKAKEL-----FETALDRSFDVGNFLYKDLIDHLCKDE 656
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 95/208 (45%), Gaps = 15/208 (7%)
Query: 109 KTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK 168
+T+ +M L ++ ++ M + G + + N V+ +LC+ V +A ++ +
Sbjct: 504 QTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDE 563
Query: 169 -LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIE----TFF 223
L + I PN ++ LIK +C D DE FE +++V TF
Sbjct: 564 MLQKGISPNISSFSILIKAFCKACDFSA--------VDEIFEIALNVCGHKEALYSLTFN 615
Query: 224 KINKDDEAMKVFQMMR--VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEA 281
++ E +K ++ + R D+G Y+ +ID +CK K+ A +L ++ +G
Sbjct: 616 ELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKGYWF 675
Query: 282 DNLTLSSIIYGLLARGRLREAYKVVEEI 309
D + +I GL RG EA ++ E++
Sbjct: 676 DPASFMPVIDGLGKRGNKHEADELAEKM 703
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 158/341 (46%), Gaps = 21/341 (6%)
Query: 77 FNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIMN 135
+N ++D + K I++ + L EM + N ++ + +L ++ F M
Sbjct: 247 YNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMF 306
Query: 136 DCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGDLI 194
GC+ ++ ++K R + EA L L + + +PN +AY LI G C G L
Sbjct: 307 LRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLE 366
Query: 195 EASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIV 254
EA ++ + M G P++ +I+ F K A + + M + + TY +
Sbjct: 367 EALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRM-ISHGCRPNVVTYTCM 425
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK--- 311
+D +CK QA +++E+M G + +T ++ I GL GR+ A K++E ++
Sbjct: 426 VDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGC 485
Query: 312 -PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH----------- 359
P+I+ Y+ L+ L R+ + EA +F+E+ R +P + TY +L G
Sbjct: 486 LPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQ 545
Query: 360 -LGKRGRKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERV 398
GK +G P + ++T+ + K GK AA+ VERV
Sbjct: 546 LFGKALVRGTAPDSITYNTM-IHAYCKQGKVKIAAQLVERV 585
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 139/303 (45%), Gaps = 8/303 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRR-LVNDKTFKIALMTLAEVRELKKMVNFF 131
N + +N ++ + + +++ + +M R L N T+ I + A+ +L +
Sbjct: 348 NVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETW 407
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDV 190
+ M GC ++ +V LC+ + +A L+ K++ E PN I + IKG C
Sbjct: 408 NRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGN 467
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G + A K+ M G P+I +++++ F++NK +EA +FQ + + + L T
Sbjct: 468 GRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQP-NLVT 526
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y V+ + G + +A + + RG D++T +++I+ +G+++ A ++VE +
Sbjct: 527 YNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVS 586
Query: 311 K-----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
PDI Y LI G EA + I +G P T+ L++ G
Sbjct: 587 SMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGH 646
Query: 366 KGP 368
GP
Sbjct: 647 MGP 649
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 156/353 (44%), Gaps = 28/353 (7%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMV 128
F H + T+ M++ +G+ +D+ LQ+M + + F + V ++ +
Sbjct: 70 FQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQAL 129
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRK--LVVEAKYLILKLSEWIKPNEIAYGWLIKG 186
F+ + + GC+ ++ + N ++ L ++ Y +K + + PN Y L+K
Sbjct: 130 KMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMK-KDGLIPNVFTYNILLKA 188
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
C + A K++ M+++G P M+ + K K D+A ++ +
Sbjct: 189 LCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPS----- 243
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
+ Y +ID MCK G+I A +L EM G++ + ++ S II L G + A+ +
Sbjct: 244 -VPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALF 302
Query: 307 EEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
++ +I + LIKG + EA +++ MI+ GCEP + Y L+ G L
Sbjct: 303 AQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHG-LCS 361
Query: 363 RG-------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
G R G P V +I + G K+G + A++ R+++ G
Sbjct: 362 NGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHG 414
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 141/317 (44%), Gaps = 34/317 (10%)
Query: 122 RELKKMVNFFH-IMNDCGCEYSLEMLNKVVKTL---CQRKLVVEAKYLILKLS-EWIKPN 176
R L ++ FF I N +++ +++ L C+ +V +Y++ ++ + I
Sbjct: 52 RNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMV---QYILQQMKMDGINCC 108
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
E + +I GY VG +A K++ + + G +P++ + + +++ NK FQ
Sbjct: 109 EDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENK-------FQ 161
Query: 237 MMR--VKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
M+ M GL TY I++ +CK ++ A+ + EM +G D +T ++++
Sbjct: 162 MINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMV 221
Query: 291 YGLLARGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
L G++ +A ++ KP + +Y+ LI G+ + R A ++ EM+ G +P +
Sbjct: 222 SSLCKAGKIDDARELAGRF-KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVV 280
Query: 351 TYIMLLQ------------GHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERV 398
+Y ++ + +G D ++ T + G GK +A + +
Sbjct: 281 SYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLM 340
Query: 399 MNRGVEVPRFDYNKFLH 415
+ G E YN +H
Sbjct: 341 IQDGCEPNVVAYNTLIH 357
>gi|15983487|gb|AAL11611.1|AF424618_1 AT5g04810/MUK11_13 [Arabidopsis thaliana]
Length = 950
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 142/294 (48%), Gaps = 7/294 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGR-RRLVNDKTFKIALMTLAEVRELKKMVNFFHI 133
I +N ++ N+D +T++EM + R +TF + A+ ++++ + F +
Sbjct: 553 ILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDM 612
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGD 192
M CGC ++ N ++ L +++ + +A ++ +++ + NE Y +++GY VGD
Sbjct: 613 MRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGD 672
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+A + + + +EG + I + +++ K + A+ V + M + + Y
Sbjct: 673 TGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSF-VYN 731
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
I+ID +RG + +A ++++M K G++ D T +S I G + A + +EE+E
Sbjct: 732 ILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEAL 791
Query: 311 --KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
KP+I Y LIKG R +A + EM G +P Y LL L +
Sbjct: 792 GVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSR 845
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 104/244 (42%), Gaps = 28/244 (11%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P + YG LI Y VG + +A ++ +M +EG + ++ MI F K+ A V
Sbjct: 480 PTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAV 539
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
F+ M VK + Y +I C G + +A ++EM K T II+G
Sbjct: 540 FEDM-VKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYA 598
Query: 295 ARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
G +R + +V + + + P + ++GLI GL+ R+ +A ++ EM G H
Sbjct: 599 KSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEH 658
Query: 351 TYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY 410
TY ++QG+ G + A +Y R+ N G++V F Y
Sbjct: 659 TYTKIMQGY-----------------------ASVGDTGKAFEYFTRLQNEGLDVDIFTY 695
Query: 411 NKFL 414
L
Sbjct: 696 EALL 699
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 161/391 (41%), Gaps = 35/391 (8%)
Query: 52 SWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTF 111
+W+ V F+ K + F MV G+ ++ ET + M R +
Sbjct: 291 NWQAVISAFEKISKP------SRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRI 344
Query: 112 KIALMTLAEV-RELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS 170
+L+ V R++ + ++ M + G E SL + +V + A Y +
Sbjct: 345 YTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAK 404
Query: 171 EWIKP-NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD 229
K N YG +I +C ++ A + M +EG + I + M++ + + +
Sbjct: 405 RIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEK 464
Query: 230 EAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
+ + VF KR+ + G + TY +I+ K GKIS+A + M + G++ + T
Sbjct: 465 KGLVVF-----KRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKT 519
Query: 286 LSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMI 341
S +I G + A+ V E++ KPD+ LY+ +I + A Q +EM
Sbjct: 520 YSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQ 579
Query: 342 KRGCEPTMHTYIMLLQGHLGKRG-------------RKGPDPLVNFDTIFVGGLVKAGKS 388
K PT T++ ++ G+ K G R G P V+ + GLV+ +
Sbjct: 580 KLRHRPTTRTFMPIIHGY-AKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQM 638
Query: 389 LDAAKYVERVMNRGVEVPRFDYNKFLHYYSN 419
A + ++ + GV Y K + Y++
Sbjct: 639 EKAVEILDEMTLAGVSANEHTYTKIMQGYAS 669
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 140/315 (44%), Gaps = 24/315 (7%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK- 168
T+ + +V ++ K + +M + G +++L+ + ++ + K A + + +
Sbjct: 484 TYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANA-FAVFED 542
Query: 169 -LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINK 227
+ E +KP+ I Y +I +C +G++ A + M P+ +I + K
Sbjct: 543 MVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGD 602
Query: 228 DDEAMKVFQMMRVKRMDDL-GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTL 286
+++VF MMR R + + T+ +I+ + ++ ++ +A +L+EM G+ A+ T
Sbjct: 603 MRRSLEVFDMMR--RCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTY 660
Query: 287 SSIIYGLLARGRLREAYKVVEEIEKP----DISLYHGLIKGLLRLRRAREATQVFREMIK 342
+ I+ G + G +A++ ++ DI Y L+K + R + A V +EM
Sbjct: 661 TKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSA 720
Query: 343 RGCEPTMHTYIMLLQGHLGKRG-------------RKGPDPLVNFDTIFVGGLVKAGKSL 389
R Y +L+ G +RG ++G P ++ T F+ KAG
Sbjct: 721 RNIPRNSFVYNILIDG-WARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMN 779
Query: 390 DAAKYVERVMNRGVE 404
A + +E + GV+
Sbjct: 780 RATQTIEEMEALGVK 794
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 100/234 (42%), Gaps = 11/234 (4%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIM 134
TFN +++ + + R ++ E L EM + N+ T+ + A V + K +F +
Sbjct: 624 TFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRL 683
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKP-NEIAYGWLIKGYCDVGDL 193
+ G + + ++K C+ + A + ++S P N Y LI G+ GD+
Sbjct: 684 QNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDV 743
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG----LS 249
EA+ + M EG +P I I K + A + ++ M+ LG +
Sbjct: 744 WEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQT-----IEEMEALGVKPNIK 798
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
TY +I + +A + EEM GI+ D ++ LL+R + EAY
Sbjct: 799 TYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAY 852
>gi|42567647|ref|NP_568141.2| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|122223689|sp|Q0WMY5.1|PP365_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g04810, chloroplastic; AltName: Full=Maize PPR4
homolog; Short=AtPPR4; Flags: Precursor
gi|110739199|dbj|BAF01515.1| membrane-associated salt-inducible protein-like [Arabidopsis
thaliana]
gi|332003406|gb|AED90789.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 952
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 142/294 (48%), Gaps = 7/294 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGR-RRLVNDKTFKIALMTLAEVRELKKMVNFFHI 133
I +N ++ N+D +T++EM + R +TF + A+ ++++ + F +
Sbjct: 555 ILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDM 614
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGD 192
M CGC ++ N ++ L +++ + +A ++ +++ + NE Y +++GY VGD
Sbjct: 615 MRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGD 674
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+A + + + +EG + I + +++ K + A+ V + M + + Y
Sbjct: 675 TGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSF-VYN 733
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
I+ID +RG + +A ++++M K G++ D T +S I G + A + +EE+E
Sbjct: 734 ILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEAL 793
Query: 311 --KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
KP+I Y LIKG R +A + EM G +P Y LL L +
Sbjct: 794 GVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSR 847
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 104/244 (42%), Gaps = 28/244 (11%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P + YG LI Y VG + +A ++ +M +EG + ++ MI F K+ A V
Sbjct: 482 PTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAV 541
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
F+ M VK + Y +I C G + +A ++EM K T II+G
Sbjct: 542 FEDM-VKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYA 600
Query: 295 ARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
G +R + +V + + + P + ++GLI GL+ R+ +A ++ EM G H
Sbjct: 601 KSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEH 660
Query: 351 TYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY 410
TY ++QG+ G + A +Y R+ N G++V F Y
Sbjct: 661 TYTKIMQGY-----------------------ASVGDTGKAFEYFTRLQNEGLDVDIFTY 697
Query: 411 NKFL 414
L
Sbjct: 698 EALL 701
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 161/391 (41%), Gaps = 35/391 (8%)
Query: 52 SWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTF 111
+W+ V F+ K + F MV G+ ++ ET + M R +
Sbjct: 293 NWQAVISAFEKISKP------SRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRI 346
Query: 112 KIALMTLAEV-RELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS 170
+L+ V R++ + ++ M + G E SL + +V + A Y +
Sbjct: 347 YTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAK 406
Query: 171 EWIKP-NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD 229
K N YG +I +C ++ A + M +EG + I + M++ + + +
Sbjct: 407 RIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEK 466
Query: 230 EAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
+ + VF KR+ + G + TY +I+ K GKIS+A + M + G++ + T
Sbjct: 467 KGLVVF-----KRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKT 521
Query: 286 LSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMI 341
S +I G + A+ V E++ KPD+ LY+ +I + A Q +EM
Sbjct: 522 YSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQ 581
Query: 342 KRGCEPTMHTYIMLLQGHLGKRG-------------RKGPDPLVNFDTIFVGGLVKAGKS 388
K PT T++ ++ G+ K G R G P V+ + GLV+ +
Sbjct: 582 KLRHRPTTRTFMPIIHGY-AKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQM 640
Query: 389 LDAAKYVERVMNRGVEVPRFDYNKFLHYYSN 419
A + ++ + GV Y K + Y++
Sbjct: 641 EKAVEILDEMTLAGVSANEHTYTKIMQGYAS 671
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 140/315 (44%), Gaps = 24/315 (7%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK- 168
T+ + +V ++ K + +M + G +++L+ + ++ + K A + + +
Sbjct: 486 TYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANA-FAVFED 544
Query: 169 -LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINK 227
+ E +KP+ I Y +I +C +G++ A + M P+ +I + K
Sbjct: 545 MVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGD 604
Query: 228 DDEAMKVFQMMRVKRMDDL-GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTL 286
+++VF MMR R + + T+ +I+ + ++ ++ +A +L+EM G+ A+ T
Sbjct: 605 MRRSLEVFDMMR--RCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTY 662
Query: 287 SSIIYGLLARGRLREAYKVVEEIEKP----DISLYHGLIKGLLRLRRAREATQVFREMIK 342
+ I+ G + G +A++ ++ DI Y L+K + R + A V +EM
Sbjct: 663 TKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSA 722
Query: 343 RGCEPTMHTYIMLLQGHLGKRG-------------RKGPDPLVNFDTIFVGGLVKAGKSL 389
R Y +L+ G +RG ++G P ++ T F+ KAG
Sbjct: 723 RNIPRNSFVYNILIDG-WARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMN 781
Query: 390 DAAKYVERVMNRGVE 404
A + +E + GV+
Sbjct: 782 RATQTIEEMEALGVK 796
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 100/234 (42%), Gaps = 11/234 (4%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIM 134
TFN +++ + + R ++ E L EM + N+ T+ + A V + K +F +
Sbjct: 626 TFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRL 685
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKP-NEIAYGWLIKGYCDVGDL 193
+ G + + ++K C+ + A + ++S P N Y LI G+ GD+
Sbjct: 686 QNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDV 745
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG----LS 249
EA+ + M EG +P I I K + A + ++ M+ LG +
Sbjct: 746 WEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQT-----IEEMEALGVKPNIK 800
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
TY +I + +A + EEM GI+ D ++ LL+R + EAY
Sbjct: 801 TYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAY 854
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 157/346 (45%), Gaps = 19/346 (5%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+ + ++D + K R + + EM + + T+ + L + E K + +
Sbjct: 200 VVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNE 259
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGD 192
M + ++ + + VV LC+ V+EA ++ + + ++PN + Y L+ G+C +
Sbjct: 260 MVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSE 319
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ EA K+++ M +GF P + +I + KI + ++AM +F+ M K + TY
Sbjct: 320 MDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIP-NTVTYS 378
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
++ +C G++ A + EM RG D ++ ++ L RL EA +++ IE
Sbjct: 379 TLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGS 438
Query: 311 --KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG---------- 358
PDI +Y +I G+ R A +F + +G P + TY +++ G
Sbjct: 439 NMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEA 498
Query: 359 --HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
G+ RKG P + G ++ ++L + ++ ++ RG
Sbjct: 499 SKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARG 544
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 140/305 (45%), Gaps = 21/305 (6%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
N T+ + L +V + M C+ + + ++ +LC+ + V +A L
Sbjct: 163 NVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLF 222
Query: 167 LKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI 225
++ + I P+ Y LI C++ + + + N M + P++ + +++ K
Sbjct: 223 SEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKE 282
Query: 226 NKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
K EA V MM +KR + + TY ++D C R ++ +A + + M +G D ++
Sbjct: 283 GKVMEAHDVVDMM-IKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVS 341
Query: 286 LSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMI 341
S++I G R+ +A + EE+ + P+ Y L+ GL + R ++A +F EM+
Sbjct: 342 YSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMV 401
Query: 342 KRGCEPTMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKS 388
RG P +Y +LL +L K R DP + TI + G+ +AG+
Sbjct: 402 TRGQIPDFVSYCILLD-YLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGE- 459
Query: 389 LDAAK 393
L+AA+
Sbjct: 460 LEAAR 464
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 122/268 (45%), Gaps = 45/268 (16%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEA 196
G + ++ N +++ LC + E +L K+ E +PN + YG LI G C VG A
Sbjct: 124 GHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAA 183
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF--------------------- 235
++ M +P + V +I++ K + +A +F
Sbjct: 184 IRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHA 243
Query: 236 ---------------QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIE 280
+M+ K M ++ + + V+D +CK GK+ +A+ +++ M KRG+E
Sbjct: 244 LCNLCEWKHVTALLNEMVNSKIMPNVVI--FSTVVDALCKEGKVMEAHDVVDMMIKRGVE 301
Query: 281 ADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQV 336
+ +T ++++ G R + EA KV + + PD+ Y LI G +++R +A +
Sbjct: 302 PNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYL 361
Query: 337 FREMIKRGCEPTMHTYIMLLQG--HLGK 362
F EM ++ P TY L+ G H+G+
Sbjct: 362 FEEMCRKELIPNTVTYSTLMHGLCHVGR 389
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 105/229 (45%), Gaps = 19/229 (8%)
Query: 203 MTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRG 262
M G P+I ++ +I +F + + A V + +K ++T+ +I +C G
Sbjct: 85 MDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKI-LKLGHQPNIATFNTLIRGLCVEG 143
Query: 263 KISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYH 318
KI + + ++M G + + +T ++I GL G A +++ +E+ PD+ +Y
Sbjct: 144 KIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYT 203
Query: 319 GLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVN----- 373
+I L + R+ +A +F EMI +G P++ TY L+ K L+N
Sbjct: 204 SIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNS 263
Query: 374 --------FDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
F T+ V L K GK ++A V+ ++ RGVE YN +
Sbjct: 264 KIMPNVVIFSTV-VDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALM 311
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 110/239 (46%), Gaps = 4/239 (1%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMV 128
FA + ++++ +++ K + I+ +EM R+ L+ N T+ + L V L+ +
Sbjct: 335 FAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAI 394
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGY 187
FH M G ++ LC+ + + EA L+ + + P+ Y +I G
Sbjct: 395 ALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGM 454
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C G+L A +++ ++ +G P++ MI + EA K+F M+ K G
Sbjct: 455 CRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNG 514
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
TY ++ + + + +L+EM RG AD ++ S+++ +L+ L ++ K +
Sbjct: 515 -CTYNLITRGFLRNNETLRGIQLLQEMLARGFSAD-VSTSTVLVEMLSDDGLDQSVKQI 571
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 110/271 (40%), Gaps = 31/271 (11%)
Query: 223 FKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEAD 282
N D+A+ F M + ++ + ++ + K S ++ +M GI +
Sbjct: 35 LNFNTLDDALSSFNRM-LHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPN 93
Query: 283 NLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFR 338
TL+ +I RL A+ V+ +I K P+I+ ++ LI+GL + E +F
Sbjct: 94 IYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFD 153
Query: 339 EMIKRGCEPTMHTYIMLLQG--HLG------------KRGRKGPDPLVNFDTIFVGGLVK 384
+MI G +P + TY L+ G +G ++G PD +V T + L K
Sbjct: 154 KMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVY--TSIIDSLCK 211
Query: 385 AGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN-----EEGVVMFEEVGKKLRE--VG 437
+ A ++++G+ F YN +H N ++ E V K+ V
Sbjct: 212 DRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVI 271
Query: 438 LADLADIFQRYGKKMATR---ERRRNRAIEP 465
+ + D + GK M + R +EP
Sbjct: 272 FSTVVDALCKEGKVMEAHDVVDMMIKRGVEP 302
>gi|357499677|ref|XP_003620127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495142|gb|AES76345.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 412
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 115/209 (55%), Gaps = 6/209 (2%)
Query: 159 VVEAK-YLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDK 217
V EAK L + + + I PN + Y L+ GYC V ++ A I++ M+ G ++ +
Sbjct: 151 VKEAKNVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWSYNI 210
Query: 218 MIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKR 277
MI F KI DEAM +F+ M +++ + TY +I+ +CK GKIS A +++EM R
Sbjct: 211 MINGFCKIKMTDEAMNLFEEMHCRKLIP-DVVTYNSLINGLCKSGKISYALKLVDEMHDR 269
Query: 278 GIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREA 333
G D +T SS++ L ++ +A +++ ++ +P++ Y LI GL + R +A
Sbjct: 270 GQPPDIITYSSLLDALCKNHQVDKAIALLKNLKDQGIRPNMYTYTILIDGLCKGGRLEDA 329
Query: 334 TQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
+F +++ +G T++TY +++ G K
Sbjct: 330 HNIFEDLLVKGYNITVNTYTVMIHGFCNK 358
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 108/233 (46%), Gaps = 14/233 (6%)
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIA 179
V E+ F M+ G ++ N ++ C+ K+ EA L ++ + P+ +
Sbjct: 183 VNEVNNAKGIFSTMSLRGVTANVWSYNIMINGFCKIKMTDEAMNLFEEMHCRKLIPDVVT 242
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
Y LI G C G + A K+ + M D G P I +++ K ++ D+A+ +
Sbjct: 243 YNSLINGLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHQVDKAIALL---- 298
Query: 240 VKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
K + D G+ TY I+ID +CK G++ A+ + E++ +G T + +I+G
Sbjct: 299 -KNLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCN 357
Query: 296 RGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+G EA ++ +++ P+ Y +I+ L +A + REMI RG
Sbjct: 358 KGLFDEALALLSKMKDNSCFPNALTYEIIIRSLFDNDENDKAENLLREMITRG 410
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 93/209 (44%), Gaps = 3/209 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N ++N M++ K + D +EM R+L+ D T+ + L + ++ +
Sbjct: 204 NVWSYNIMINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLV 263
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
M+D G + + ++ LC+ V +A L+ L + I+PN Y LI G C
Sbjct: 264 DEMHDRGQPPDIITYSSLLDALCKNHQVDKAIALLKNLKDQGIRPNMYTYTILIDGLCKG 323
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G L +A I+ + +G+ +++ MI F DEA+ + M+ L T
Sbjct: 324 GRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNAL-T 382
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGI 279
Y I+I + + +A +L EM RG+
Sbjct: 383 YEIIIRSLFDNDENDKAENLLREMITRGL 411
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 71/183 (38%), Gaps = 27/183 (14%)
Query: 260 KRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDIS 315
G + +A +L M K+GI + +T SS++ G + A + + ++
Sbjct: 147 NEGNVKEAKNVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVW 206
Query: 316 LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFD 375
Y+ +I G +++ EA +F EM R P + TY L
Sbjct: 207 SYNIMINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSL-------------------- 246
Query: 376 TIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLRE 435
+ GL K+GK A K V+ + +RG Y+ L V + K L++
Sbjct: 247 ---INGLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHQVDKAIALLKNLKD 303
Query: 436 VGL 438
G+
Sbjct: 304 QGI 306
>gi|302763707|ref|XP_002965275.1| hypothetical protein SELMODRAFT_83272 [Selaginella moellendorffii]
gi|300167508|gb|EFJ34113.1| hypothetical protein SELMODRAFT_83272 [Selaginella moellendorffii]
Length = 445
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 137/292 (46%), Gaps = 7/292 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVNFF 131
NS+++N ++D + S I E LQ M +R + ++ A+ T L + L +
Sbjct: 82 NSVSYNTLIDALCSSGRIQEAREELQAMAKRGVAPNRVTYNAMATGLGKAGLLDEAFELM 141
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDV 190
+M G + N VV+ LC+ EA K + L I+PN + ++ +C
Sbjct: 142 GVMESAGFALTAVTFNPVVEFLCKSGKPDEACKVMETMLLRNIEPNILTLNLILHAFCKA 201
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
EA + ++M + GF P+I + ++E F ++ D A ++ + M + T
Sbjct: 202 ARPEEALGMTDIMVEMGFCPTIVTFNALLELFCNTDQMDSAAELLETMARSKCKP-NFVT 260
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK----VV 306
Y I++ + G++ +A LE++ G + L ++ + GL G + A + +
Sbjct: 261 YSIMVQKFAEMGRMVEARAFLEQLVVCGYAPNLLVCNAYVAGLCKTGEMDLASRFLTVMA 320
Query: 307 EEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
EE + + + Y+ L++G +L R EA +V EMI G P TY +L+QG
Sbjct: 321 EEGCRANTATYNSLVEGFCKLGRMDEAERVLEEMIAEGSLPDSTTYSVLIQG 372
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 126/290 (43%), Gaps = 25/290 (8%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDE 206
N ++K + +LV EAK + ++ KPN ++Y LI C G + EA + M
Sbjct: 55 NLMLKGFSEARLVDEAKSHLHRMD--CKPNSVSYNTLIDALCSSGRIQEAREELQAMAKR 112
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS--TYRIVIDWMCKRGKI 264
G P+ + M K DEA F++M V L+ T+ V++++CK GK
Sbjct: 113 GVAPNRVTYNAMATGLGKAGLLDEA---FELMGVMESAGFALTAVTFNPVVEFLCKSGKP 169
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGL 320
+A ++E M R IE + LTL+ I++ R EA + + + + P I ++ L
Sbjct: 170 DEACKVMETMLLRNIEPNILTLNLILHAFCKAARPEEALGMTDIMVEMGFCPTIVTFNAL 229
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK-------------G 367
++ + A ++ M + C+P TY +++Q + GR G
Sbjct: 230 LELFCNTDQMDSAAELLETMARSKCKPNFVTYSIMVQ-KFAEMGRMVEARAFLEQLVVCG 288
Query: 368 PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
P + +V GL K G+ A++++ + G YN + +
Sbjct: 289 YAPNLLVCNAYVAGLCKTGEMDLASRFLTVMAEEGCRANTATYNSLVEGF 338
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 128/279 (45%), Gaps = 9/279 (3%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMV 128
FA ++TFN +V+ + KS D + ++ M R + N T + L + ++ +
Sbjct: 149 FALTAVTFNPVVEFLCKSGKPDEACKVMETMLLRNIEPNILTLNLILHAFCKAARPEEAL 208
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGY 187
IM + G ++ N +++ C + A L+ ++ KPN + Y +++ +
Sbjct: 209 GMTDIMVEMGFCPTIVTFNALLELFCNTDQMDSAAELLETMARSKCKPNFVTYSIMVQKF 268
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
++G ++EA + G+ P++ V + + K + D A + +M +
Sbjct: 269 AEMGRMVEARAFLEQLVVCGYAPNLLVCNAYVAGLCKTGEMDLASRFLTVM-AEEGCRAN 327
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
+TY +++ CK G++ +A +LEEM G D+ T S +I GL + G++ A+ V+
Sbjct: 328 TATYNSLVEGFCKLGRMDEAERVLEEMIAEGSLPDSTTYSVLIQGLCSAGQIVHAFMVML 387
Query: 308 EI------EKPDISLYHGLIKGLLRLRRAREATQVFREM 340
++ +PD + + LI+ L L A V M
Sbjct: 388 QVTRAVESARPDPATFVKLIEKLCELGEMDRAALVLERM 426
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 96/196 (48%), Gaps = 11/196 (5%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVV--DKMIETFFKIN 226
L E++ +E YG L+ G+C G+ EA ++ D G P VV + M++ F +
Sbjct: 7 LGEFVH-SEFTYGTLVHGHCLAGEFDEAKRLVAEFKDTGMSPGSLVVLHNLMLKGFSEAR 65
Query: 227 KDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTL 286
DEA M K +Y +ID +C G+I +A L+ M KRG+ + +T
Sbjct: 66 LVDEAKSHLHRMDCKPNS----VSYNTLIDALCSSGRIQEAREELQAMAKRGVAPNRVTY 121
Query: 287 SSIIYGLLARGRLREAYKVVEEIEKPDISL----YHGLIKGLLRLRRAREATQVFREMIK 342
+++ GL G L EA++++ +E +L ++ +++ L + + EA +V M+
Sbjct: 122 NAMATGLGKAGLLDEAFELMGVMESAGFALTAVTFNPVVEFLCKSGKPDEACKVMETMLL 181
Query: 343 RGCEPTMHTYIMLLQG 358
R EP + T ++L
Sbjct: 182 RNIEPNILTLNLILHA 197
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 82/196 (41%), Gaps = 41/196 (20%)
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
TY ++ C G+ +A ++ E G+ +L +++ L+ +G EA ++V+E
Sbjct: 16 TYGTLVHGHCLAGEFDEAKRLVAEFKDTGMSPGSLV---VLHNLMLKG-FSEA-RLVDEA 70
Query: 310 E--------KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG 361
+ KP+ Y+ LI L R +EA + + M KRG P TY + G LG
Sbjct: 71 KSHLHRMDCKPNSVSYNTLIDALCSSGRIQEAREELQAMAKRGVAPNRVTYNAMATG-LG 129
Query: 362 KRGRKGP--------------------DPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNR 401
K G +P+V F L K+GK +A K +E ++ R
Sbjct: 130 KAGLLDEAFELMGVMESAGFALTAVTFNPVVEF-------LCKSGKPDEACKVMETMLLR 182
Query: 402 GVEVPRFDYNKFLHYY 417
+E N LH +
Sbjct: 183 NIEPNILTLNLILHAF 198
>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
Length = 331
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 156/344 (45%), Gaps = 54/344 (15%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
+++T+ +V+ + K++ ID T++EM R + D F +
Sbjct: 8 DALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDA--------------------FIY 47
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVG 191
N V+ LCQ + V EA+ L K+ + I PN + Y LI G C
Sbjct: 48 --------------NFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAW 93
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTY 251
+ A +++ M +G+ P+ + +I+ F K A VF M V+ + TY
Sbjct: 94 RIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKM-VRSNCVPNVVTY 152
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE- 310
+ID + K GK+ A +L+ M K+G+ + T S +I G R+ EA+K++E++
Sbjct: 153 TTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVT 212
Query: 311 ---KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKG 367
P + Y+ L+ L R + +A ++FR M +R C PT+ TY LL+ + G
Sbjct: 213 QGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDG 272
Query: 368 -------------PDPLVNFDTIFVGGLVKAGKSLDAAKYVERV 398
P + +DT+ GL +AGK +A + +E++
Sbjct: 273 AHRLYAEMIAKGCPPDAITYDTL-AWGLTRAGKVHEAQELMEKM 315
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 120/240 (50%), Gaps = 3/240 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALMTLAEVRELKKMVNFF 131
N +T+N +++ + K+ I+ +E +EM G+ + + ++ + + ++L + F
Sbjct: 78 NVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVF 137
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQR-KLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDV 190
M C ++ ++ L + K+ A+ L + + + PN Y LI G+C V
Sbjct: 138 DKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKV 197
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
+ EA K+ M +G P++ + ++ + + +K ++A K+F+ M +R + T
Sbjct: 198 RRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPT-VVT 256
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y ++ +C ++ A+ + EM +G D +T ++ +GL G++ EA +++E+++
Sbjct: 257 YNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMK 316
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 84/170 (49%), Gaps = 16/170 (9%)
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
TY +++ +CK +I A +EEM RGI+ D + ++ GL ++ EA + E++
Sbjct: 11 TYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKM 70
Query: 310 EK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG- 364
K P++ Y+ LI GL + R A ++F+EM +G PT +Y L+ G K+
Sbjct: 71 VKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDL 130
Query: 365 -----------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
R P V T + GL K+GK AA+ ++ ++ +GV
Sbjct: 131 VAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGV 180
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 171/386 (44%), Gaps = 45/386 (11%)
Query: 58 LFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALM 116
LF + Q+ P + +T+N +V + K+R +D L++M +R L N+ T+ +
Sbjct: 244 LFKEMVQRGIP---PDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIY 300
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKP 175
+ + K+ V F M + L+ ++ +LC+ + EA+ + ++ + P
Sbjct: 301 GYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNP 360
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
+ +Y ++ GY G L++ + +++LM +G P + +I+ + D+AM +F
Sbjct: 361 DVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIF 420
Query: 236 QMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
MR D G+ TYR VI +C+ GK+ A +M +G+ D + +I
Sbjct: 421 NEMR-----DHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQ 475
Query: 292 GLLARGRLREAYKVVEEIEKP----DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
G G L +A +++ EI DI + +I L +L R +A +F + G P
Sbjct: 476 GFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHP 535
Query: 348 TMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPR 407
Y ML+ G+ VG + KA + DA +++ G+E
Sbjct: 536 DAVVYNMLMDGY-----------------CLVGKMEKALRVFDA------MVSAGIEPNV 572
Query: 408 FDYNKFLHYYSN----EEGVVMFEEV 429
Y ++ Y +EG+ +F E+
Sbjct: 573 VGYGTLVNGYCKIGRIDEGLSLFREM 598
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 121/241 (50%), Gaps = 9/241 (3%)
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIK--PNEIAYGWLIKGY 187
FF + G ++ + N +++ C+ K EA ++L + + P+ +Y L+K
Sbjct: 136 FFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSL 195
Query: 188 CDVGDLIEASKIWNLMTDEG--FEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD 245
CD G +A + +M + G P++ + +I+ FFK ++A +F+ M V+R
Sbjct: 196 CDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEM-VQRGIP 254
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
L TY V+ +CK + +A L +M + + +N T +++IYG + G+ +EA +V
Sbjct: 255 PDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRV 314
Query: 306 VEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG 361
+E+ + PD+ L+ L + + +EA VF M +G P + +Y ++L G+
Sbjct: 315 FKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYAT 374
Query: 362 K 362
K
Sbjct: 375 K 375
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 115/229 (50%), Gaps = 7/229 (3%)
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVG 191
IMN+ G + + ++ LC+ V++A+ + L ++ + P+ + Y L+ GYC VG
Sbjct: 493 IMNN-GMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVG 551
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTY 251
+ +A ++++ M G EP++ ++ + KI + DE + +F+ M ++R Y
Sbjct: 552 KMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREM-LQRGIKPSTILY 610
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE- 310
I+ID + + G+ A EM + GI D T + ++ GL EA + +E+
Sbjct: 611 SIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRA 670
Query: 311 ---KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
K +I + +I G+ + RR EA +F + + P++ TY +++
Sbjct: 671 MNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMI 719
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 94/233 (40%), Gaps = 35/233 (15%)
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIA 179
V +++K + F M G E ++ +V C+ + E L + L IKP+ I
Sbjct: 550 VGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTIL 609
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM------- 232
Y +I G + G + A ++ MT+ G I + ++ FK DEA+
Sbjct: 610 YSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELR 669
Query: 233 ----------------KVFQMMRVKRMDDLGLS-----------TYRIVIDWMCKRGKIS 265
+FQ RV+ DL S TY I+I + K G +
Sbjct: 670 AMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVE 729
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISLYH 318
+A M M G E ++ L+ ++ LL + + A + +I++ + SL H
Sbjct: 730 EAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEH 782
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N IT N M+D + ++R ++ + + R RLV T+ I + L + +++ + F
Sbjct: 676 NIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMF 735
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE 171
M + GCE + +LN VV+ L ++ +V A + K+ E
Sbjct: 736 SSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDE 775
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 101/426 (23%), Positives = 173/426 (40%), Gaps = 63/426 (14%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHI 133
+TFN +++ + K E +M R D T+ + L ++ E F
Sbjct: 193 VTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRK 252
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEA----KYL------------------ILKLSE 171
M + GC+ + + ++ +LC+ + V EA Y+ + S
Sbjct: 253 MGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSR 312
Query: 172 W--------------IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDK 217
W I PN + + LI +C G++ EA + MT+ G EP++
Sbjct: 313 WREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSS 372
Query: 218 MIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKR 277
++ + + EA K+F +M K + +Y I+I+ CK +I +A + EM +
Sbjct: 373 LMNGYSLQAEVVEARKLFDVMITKGCKP-DVFSYNILINGYCKAKRIGEAKQLFNEMIHQ 431
Query: 278 GIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREA 333
G+ D ++ +++I GL GRLREA+ + + + PD+ Y L+ G + +A
Sbjct: 432 GLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKA 491
Query: 334 TQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK------------GPDPLVNFDTIFVGG 381
++FR M +P M Y +L+ R K G P V T + G
Sbjct: 492 FRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIING 551
Query: 382 LVKAGKSLDAAKYVERVMNRGVEVPRFDYN----KFLHYYSNEEGVVMFEEVGKKLREVG 437
L K G +A + + G F YN FL + V + E +RE G
Sbjct: 552 LCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGE----MREKG 607
Query: 438 -LADLA 442
+AD+A
Sbjct: 608 FVADVA 613
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 164/361 (45%), Gaps = 30/361 (8%)
Query: 64 QKAQPCFAHNSITFNRMVDIIGKSRNI-DLFWETLQEMGRRRLVNDK-TFKIALMTLAEV 121
+K +PC I FN+++ I K R+ D ++M L D T + + ++
Sbjct: 115 RKPRPCI----IQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFFQL 170
Query: 122 RELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAY 180
+ + + + G + ++ N ++ LC+ +A L + + +P+ Y
Sbjct: 171 QRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTY 230
Query: 181 GWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
+I G C +G+ + A+ ++ M + G +P + +I++ K + +EA+ +F M+
Sbjct: 231 TTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKA 290
Query: 241 KRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
K + + TY +I +C + +A ML EM I + +T S +I G +
Sbjct: 291 KGISP-NIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVF 349
Query: 301 EAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
EA V++ + +P++ Y L+ G EA ++F MI +GC+P + +Y +L+
Sbjct: 350 EARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILI 409
Query: 357 QGHLGKRGRKG---------------PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNR 401
G+ K R G PD +V+++T+ + GL + G+ +A + ++
Sbjct: 410 NGYC-KAKRIGEAKQLFNEMIHQGLTPD-IVSYNTL-IDGLCQLGRLREAHDLFKNMLTN 466
Query: 402 G 402
G
Sbjct: 467 G 467
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 155/367 (42%), Gaps = 39/367 (10%)
Query: 58 LFFQYTQ-KAQPCFAHNSITFNRMVDIIGKSRNIDL---FWETLQEMGRRRLVNDKTFKI 113
LFF Q + P A F+R++ I K + D+ WE +Q +G N T I
Sbjct: 68 LFFHMVQCRPLPSIAD----FSRLLSAISKMKKYDVVIYLWEQMQMLGIPH--NLCTCNI 121
Query: 114 ALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEW 172
L +L ++F M G E S+ ++ C+ V +A Y+ ++
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
KPN + Y +I G C + A + N M +G P + + +I + +A
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
++ M KR + T+ +ID K G++S+A EEM +R ++ D +T S +IYG
Sbjct: 242 RMVSCM-TKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300
Query: 293 LLARGRLREAYK----VVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
L RL EA + +V + PD+ Y LI G + ++ ++F EM +RG
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360
Query: 349 MHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRF 408
TY +L+QG+ +AGK A + R++ GV
Sbjct: 361 TVTYTILIQGY-----------------------CRAGKLNVAEEIFRRMVFCGVHPNII 397
Query: 409 DYNKFLH 415
YN LH
Sbjct: 398 TYNVLLH 404
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 117/279 (41%), Gaps = 42/279 (15%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHIM 134
TFN ++D K + E +EM RR L D T+ + + L L + F M
Sbjct: 258 TFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFM 317
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDL 193
GC + + ++ C+ K V L ++S+ + N + Y LI+GYC G L
Sbjct: 318 VSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKL 377
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
A +I+ M G P+I TY +
Sbjct: 378 NVAEEIFRRMVFCGVHPNI------------------------------------ITYNV 401
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE--- 310
++ +C GKI +A +L +M K G++AD +T + II G+ G + +A+ + +
Sbjct: 402 LLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQG 461
Query: 311 -KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
PDI Y ++ GL + REA +FR+M + G P
Sbjct: 462 LMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 142/336 (42%), Gaps = 7/336 (2%)
Query: 42 FLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMG 101
F + N F R + + Q + N + +N ++D + KS+ +D + L M
Sbjct: 154 FGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRME 213
Query: 102 RRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVV 160
+ + D T+ + L M + N ++ + V
Sbjct: 214 KDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVS 273
Query: 161 EAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMI 219
EA+ ++ + P+ + Y LI G C L EA +++ M +G P + +I
Sbjct: 274 EAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILI 333
Query: 220 ETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGI 279
+ K K + MK+F M +R TY I+I C+ GK++ A + M G+
Sbjct: 334 NGYCKSKKVEHGMKLFCEMS-QRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGV 392
Query: 280 EADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQ 335
+ +T + +++GL G++ +A ++ +++K DI Y+ +I+G+ + +A
Sbjct: 393 HPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWD 452
Query: 336 VFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPL 371
++ + +G P + TY ++ G K R+ D L
Sbjct: 453 IYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADAL 488
>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g22470, mitochondrial-like [Glycine max]
Length = 468
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 144/295 (48%), Gaps = 15/295 (5%)
Query: 106 VNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYL 165
N ++ L L + E + + ++ D ++ M + ++ LC+ KLV EA L
Sbjct: 113 TNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDL 172
Query: 166 ILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFK 224
++ + I PN I Y LI +C G L+ A + + M + P + +I+ K
Sbjct: 173 YSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCK 232
Query: 225 INKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNL 284
K+ A ++F M V+ + + +Y I+I+ +CK ++ +A +L EM + + D +
Sbjct: 233 EGKN--AKQIFHAM-VQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTV 289
Query: 285 TLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREM 340
T +S+I GL GR+ A ++ E+ + D+ Y L+ L + + +AT +F +M
Sbjct: 290 TYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKM 349
Query: 341 IKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYV 395
+RG +PTM+TY L+ G L K GR L N +F LVK G +D Y
Sbjct: 350 KERGIQPTMYTYTALIDG-LCKGGR-----LKNAQELFQHLLVK-GCCIDVWTYT 397
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 123/277 (44%), Gaps = 7/277 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
N IT+N ++ + + + L EM + +N + +++ A +E K FH
Sbjct: 184 NVITYNTLICAFCLAGQLMGAFSLLHEMILKN-INPDVYTFSILIDALCKEGKNAKQIFH 242
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVG 191
M G ++ N ++ LC+ K V EA L+ + L + + P+ + Y LI G C G
Sbjct: 243 AMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSG 302
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTY 251
+ A + N M G + +++ K D+A +F M+ +R + TY
Sbjct: 303 RITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMK-ERGIQPTMYTY 361
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK 311
+ID +CK G++ A + + + +G D T + +I GL G EA + ++E
Sbjct: 362 TALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMED 421
Query: 312 ----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
P+ + +I+ L +A ++ EMI +G
Sbjct: 422 NGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKG 458
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 99/199 (49%), Gaps = 4/199 (2%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
+++ + N+++YG L+ G C G+ A K+ ++ D P++ + +I+ K
Sbjct: 107 VAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLV 166
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
+EA ++ M + + + TY +I C G++ A+++L EM + I D T S
Sbjct: 167 NEAYDLYSEMDAREIFP-NVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSI 225
Query: 289 IIYGLLARGRLREA--YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
+I L G+ + + +V+ P++ Y+ +I GL + +R EA + REM+ +
Sbjct: 226 LIDALCKEGKNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMV 285
Query: 347 PTMHTYIMLLQGHLGKRGR 365
P TY L+ G L K GR
Sbjct: 286 PDTVTYNSLIDG-LCKSGR 303
>gi|297844992|ref|XP_002890377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336219|gb|EFH66636.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 537
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 130/296 (43%), Gaps = 41/296 (13%)
Query: 77 FNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIMN 135
+N M+D+ GK R DL W + M R + ++ +TF I + + V+ F+ M
Sbjct: 154 YNEMIDLAGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 136 DCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIE 195
D GC + V+ L +++ EA+ L + +P+ I Y L++G+C G++ E
Sbjct: 214 DYGCVPDQIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISE 273
Query: 196 ASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVI 255
A K++ M G EP++ TY IVI
Sbjct: 274 AEKVFKDMKLAGIEPNV------------------------------------YTYSIVI 297
Query: 256 DWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK---- 311
D +C+ G+IS+A+ + +M G + +T ++++ + GR + +V +++K
Sbjct: 298 DALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRPEKVLQVYNQMKKLGCE 357
Query: 312 PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKG 367
PD Y+ LI+ R A +V MIK+ CE T+ + + KR G
Sbjct: 358 PDTITYNFLIETHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNG 413
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 96/211 (45%), Gaps = 2/211 (0%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVN 129
A N+ITFN ++ + K+ + + +M + D T+ + T L+ V
Sbjct: 322 APNAITFNNLMRVHVKAGRPEKVLQVYNQMKKLGCEPDTITYNFLIETHCRDENLENAVK 381
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYC 188
+ M CE + N + + + +++ V A + K+ E +PN + Y L++ +
Sbjct: 382 VLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFA 441
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
K+ M D+ EP+++ ++ F + + A K+F+ M ++ L
Sbjct: 442 GSKSTDMVLKMKKDMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSL 501
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGI 279
S Y +V+ + + G++ + ++E+M ++G+
Sbjct: 502 SLYEMVLAQLRRAGQLKKHEELVEKMIQKGL 532
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 49/243 (20%), Positives = 112/243 (46%), Gaps = 10/243 (4%)
Query: 73 NSITFNRMVDIIGK----SRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMV 128
N T++ ++D + + SR D+F + L + TF + + +K++
Sbjct: 289 NVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAI---TFNNLMRVHVKAGRPEKVL 345
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGY 187
++ M GCE N +++T C+ + + A K L + + + N + + +
Sbjct: 346 QVYNQMKKLGCEPDTITYNFLIETHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYI 405
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
D+ A ++++ M + EP+ + ++ F D +K+ + M K ++
Sbjct: 406 EKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFAGSKSTDMVLKMKKDMDDKEVEP-N 464
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR-GRLREAYKVV 306
++TYR+++ C G + AY + +EM + +L+L ++ L R G+L++ ++V
Sbjct: 465 VNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELV 524
Query: 307 EEI 309
E++
Sbjct: 525 EKM 527
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 157/346 (45%), Gaps = 19/346 (5%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+ + ++D + K R + + EM + + T+ + L + E K + +
Sbjct: 209 VVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNE 268
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGD 192
M + ++ + + VV LC+ V+EA ++ + + ++PN + Y L+ G+C +
Sbjct: 269 MVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSE 328
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ EA K+++ M +GF P + +I + KI + ++AM +F+ M K + TY
Sbjct: 329 MDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIP-NTVTYS 387
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
++ +C G++ A + EM RG D ++ ++ L RL EA +++ IE
Sbjct: 388 TLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGS 447
Query: 311 --KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG---------- 358
PDI +Y +I G+ R A +F + +G P + TY +++ G
Sbjct: 448 NMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEA 507
Query: 359 --HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
G+ RKG P + G ++ ++L + ++ ++ RG
Sbjct: 508 SKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARG 553
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 140/305 (45%), Gaps = 21/305 (6%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
N T+ + L +V + M C+ + + ++ +LC+ + V +A L
Sbjct: 172 NVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLF 231
Query: 167 LKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI 225
++ + I P+ Y LI C++ + + + N M + P++ + +++ K
Sbjct: 232 SEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKE 291
Query: 226 NKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
K EA V MM +KR + + TY ++D C R ++ +A + + M +G D ++
Sbjct: 292 GKVMEAHDVVDMM-IKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVS 350
Query: 286 LSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMI 341
S++I G R+ +A + EE+ + P+ Y L+ GL + R ++A +F EM+
Sbjct: 351 YSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMV 410
Query: 342 KRGCEPTMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKS 388
RG P +Y +LL +L K R DP + TI + G+ +AG+
Sbjct: 411 TRGQIPDFVSYCILLD-YLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGE- 468
Query: 389 LDAAK 393
L+AA+
Sbjct: 469 LEAAR 473
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 122/268 (45%), Gaps = 45/268 (16%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEA 196
G + ++ N +++ LC + E +L K+ E +PN + YG LI G C VG A
Sbjct: 133 GHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAA 192
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF--------------------- 235
++ M +P + V +I++ K + +A +F
Sbjct: 193 IRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHA 252
Query: 236 ---------------QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIE 280
+M+ K M ++ + + V+D +CK GK+ +A+ +++ M KRG+E
Sbjct: 253 LCNLCEWKHVTALLNEMVNSKIMPNVVI--FSTVVDALCKEGKVMEAHDVVDMMIKRGVE 310
Query: 281 ADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQV 336
+ +T ++++ G R + EA KV + + PD+ Y LI G +++R +A +
Sbjct: 311 PNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYL 370
Query: 337 FREMIKRGCEPTMHTYIMLLQG--HLGK 362
F EM ++ P TY L+ G H+G+
Sbjct: 371 FEEMCRKELIPNTVTYSTLMHGLCHVGR 398
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 105/229 (45%), Gaps = 19/229 (8%)
Query: 203 MTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRG 262
M G P+I ++ +I +F + + A V + +K ++T+ +I +C G
Sbjct: 94 MDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKI-LKLGHQPNIATFNTLIRGLCVEG 152
Query: 263 KISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYH 318
KI + + ++M G + + +T ++I GL G A +++ +E+ PD+ +Y
Sbjct: 153 KIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYT 212
Query: 319 GLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVN----- 373
+I L + R+ +A +F EMI +G P++ TY L+ K L+N
Sbjct: 213 SIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNS 272
Query: 374 --------FDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
F T+ V L K GK ++A V+ ++ RGVE YN +
Sbjct: 273 KIMPNVVIFSTV-VDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALM 320
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 110/239 (46%), Gaps = 4/239 (1%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMV 128
FA + ++++ +++ K + I+ +EM R+ L+ N T+ + L V L+ +
Sbjct: 344 FAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAI 403
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGY 187
FH M G ++ LC+ + + EA L+ + + P+ Y +I G
Sbjct: 404 ALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGM 463
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C G+L A +++ ++ +G P++ MI + EA K+F M+ K G
Sbjct: 464 CRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNG 523
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
TY ++ + + + +L+EM RG AD ++ S+++ +L+ L ++ K +
Sbjct: 524 -CTYNLITRGFLRNNETLRGIQLLQEMLARGFSAD-VSTSTVLVEMLSDDGLDQSVKQI 580
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 110/271 (40%), Gaps = 31/271 (11%)
Query: 223 FKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEAD 282
N D+A+ F M + ++ + ++ + K S ++ +M GI +
Sbjct: 44 LNFNTLDDALSSFNRM-LHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPN 102
Query: 283 NLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFR 338
TL+ +I RL A+ V+ +I K P+I+ ++ LI+GL + E +F
Sbjct: 103 IYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFD 162
Query: 339 EMIKRGCEPTMHTYIMLLQG--HLG------------KRGRKGPDPLVNFDTIFVGGLVK 384
+MI G +P + TY L+ G +G ++G PD +V T + L K
Sbjct: 163 KMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVY--TSIIDSLCK 220
Query: 385 AGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN-----EEGVVMFEEVGKKLRE--VG 437
+ A ++++G+ F YN +H N ++ E V K+ V
Sbjct: 221 DRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVI 280
Query: 438 LADLADIFQRYGKKMATR---ERRRNRAIEP 465
+ + D + GK M + R +EP
Sbjct: 281 FSTVVDALCKEGKVMEAHDVVDMMIKRGVEP 311
>gi|357508583|ref|XP_003624580.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499595|gb|AES80798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 585
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 166/365 (45%), Gaps = 16/365 (4%)
Query: 4 DPGHLVRVCTIL--YQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQ 61
D G + V TIL + S + L CN + E +++ + W + FF
Sbjct: 94 DDGFVKDVKTILDIIHKPGSGPYEIKQKLEDCNVKASSELVVEVLSRVRNDWEAAFTFFL 153
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRR----LVNDKTFKIALMT 117
+ K QP + H+ ++ M+ ++GK R D W ++EM R + +V +T I +
Sbjct: 154 WAGK-QPGYDHSVREYHSMISVLGKMRRFDTAWALVEEMRRGKTGESIVTPQTLLIMIRK 212
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNE 177
V ++ + +N F+ + L ++ LC+ K V +A++L+ +
Sbjct: 213 YCAVHDVGRAINTFYAFKRFNFQVGLYEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLDT 272
Query: 178 IAYGWLIKGYCD-VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
++ ++ G+C+ + A +IW M+ + + +I + K +K +++F+
Sbjct: 273 KSFNIILNGWCNLIVSARNAERIWEEMSKRRIQHDVVSYASIISCYSKSSKLYRVLQLFE 332
Query: 237 MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR 296
M+ KR Y VI + K + +A ++ +M + D +T +S+I L
Sbjct: 333 QMK-KRNITPDRKVYNAVIFSLAKNRMVKEAVNLIIKMEDNNVTPDAITYNSLIKPLCKA 391
Query: 297 GRLREAYKV----VEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
++ EA ++ +E P I +H + +LR++ E ++ +M + GC PT+ TY
Sbjct: 392 RKIDEAKEIFNVMLERGISPSIRTFHAFFR-ILRVK--EEVFELLDKMKELGCNPTIETY 448
Query: 353 IMLLQ 357
IML++
Sbjct: 449 IMLIR 453
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 126/244 (51%), Gaps = 17/244 (6%)
Query: 74 SITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTL-AEVRELKKMVNFFH 132
+I N ++I +RN + WE EM +RR+ +D ++++ ++ +L +++ F
Sbjct: 276 NIILNGWCNLIVSARNAERIWE---EMSKRRIQHDVVSYASIISCYSKSSKLYRVLQLFE 332
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVG 191
M ++ N V+ +L + ++V EA LI+K+ + + P+ I Y LIK C
Sbjct: 333 QMKKRNITPDRKVYNAVIFSLAKNRMVKEAVNLIIKMEDNNVTPDAITYNSLIKPLCKAR 392
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG---- 247
+ EA +I+N+M + G PSI + FF+I + E +VF+++ +M +LG
Sbjct: 393 KIDEAKEIFNVMLERGISPSI----RTFHAFFRILRVKE--EVFELL--DKMKELGCNPT 444
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
+ TY ++I C+ ++ + + M + GI D + +I+GL ++ EAYK
Sbjct: 445 IETYIMLIRKFCRWRQLDEVKRIWNAMREDGIGHDRSSYIVLIHGLFLNCKVEEAYKYYI 504
Query: 308 EIEK 311
E+++
Sbjct: 505 EMQE 508
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 148/322 (45%), Gaps = 34/322 (10%)
Query: 142 SLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIW 200
S+ N ++ LC+ +AK I + + +KPN + Y +I GYC G ASKI+
Sbjct: 216 SIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIF 275
Query: 201 NLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVID 256
M D+ +P + I K + +EA V ++ + GL TY +ID
Sbjct: 276 KTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLC-----KLLESGLVPNAVTYNALID 330
Query: 257 WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KP 312
C +G + +A+ +EM RGI A T + +I+ L R+ EA +++E+ +P
Sbjct: 331 GCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEP 390
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKG----- 367
D+ Y+ I G R A++A +F EM+++ PT+ TY L+ GKR R
Sbjct: 391 DVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDV-FGKRNRMSEAEEK 449
Query: 368 ----------PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP-RFDYNKFLHY 416
PD ++ F+ + G V ++D A + + M+ VP +N +
Sbjct: 450 FKKSIKEGMLPD-IIMFNALIDGHCVNG--NIDRAFQLLKEMDNAKVVPDEVTFNTLMQG 506
Query: 417 YSNEEGVVMFEEVGKKLREVGL 438
Y E V +++ +++E G+
Sbjct: 507 YCRERKVEEAKKLLDEMKERGI 528
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 148/291 (50%), Gaps = 9/291 (3%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHIM 134
T+N + + K R I+ L ++ LV N T+ + +L K + M
Sbjct: 289 TYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEM 348
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDL 193
+ G S+ N ++ L K + EA+ +I ++ E ++P+ + Y I GYC G+
Sbjct: 349 MNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNA 408
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ-MMRVKRMDDLGLSTYR 252
+A +++ M ++ P+++ +I+ F K N+ EA + F+ ++ + D+ + +
Sbjct: 409 KKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIM--FN 466
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
+ID C G I +A+ +L+EM + D +T ++++ G ++ EA K+++E++
Sbjct: 467 ALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKER 526
Query: 311 --KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
KPD Y+ LI G + ++A +VF EM+ G +PT+ TY L+QG+
Sbjct: 527 GIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGY 577
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 179/404 (44%), Gaps = 29/404 (7%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDII---GKSRNIDLFWETLQEMGRRRLVNDKTFKIAL 115
+F Y + + + +TFN M++I+ GK + F ++ G + N T+ +
Sbjct: 202 WFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKP--NVVTYNTVI 259
Query: 116 MTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIK 174
+ + F M D + N + LC+ + + EA ++ KL E +
Sbjct: 260 NGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLV 319
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
PN + Y LI G C+ GDL +A + M + G S+ + +I F + +EA +
Sbjct: 320 PNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDM 379
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
+ MR K ++ + TY I I+ C+ G +A ++ +EM ++ I T +S+I
Sbjct: 380 IKEMREKGVEP-DVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFG 438
Query: 295 ARGRLREA----YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
R R+ EA K ++E PDI +++ LI G A Q+ +EM P
Sbjct: 439 KRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEV 498
Query: 351 TYIMLLQGH---------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYV 395
T+ L+QG+ + +RG K PD ++++T+ + G K G DA +
Sbjct: 499 TFNTLMQGYCRERKVEEAKKLLDEMKERGIK-PDH-ISYNTL-ISGYSKRGDMKDALEVF 555
Query: 396 ERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLA 439
+ +++ G + YN + YS EE+ ++++ G+
Sbjct: 556 DEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGIT 599
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 92/187 (49%), Gaps = 40/187 (21%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIM 134
I FN ++D + NID ++ L+EM ++V D+ V F
Sbjct: 463 IMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDE------------------VTF---- 500
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDL 193
N +++ C+ + V EAK L+ ++ E IKP+ I+Y LI GY GD+
Sbjct: 501 ------------NTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDM 548
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM--DDLGLSTY 251
+A ++++ M GF+P++ + +I+ + KI + D A ++ + M+ K + DD STY
Sbjct: 549 KDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDD---STY 605
Query: 252 RIVIDWM 258
VI+ M
Sbjct: 606 LYVIEAM 612
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 134/292 (45%), Gaps = 7/292 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
N + +N ++ + + E L EM ++ ++D TF I + + + +++
Sbjct: 320 NVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELL 379
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDV 190
M GC + V+ C+ L+ EA L+ +S KPN ++Y ++KG C
Sbjct: 380 EQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSA 439
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G ++A ++ + M +G P+ + +I K ++A+++ + M V L +
Sbjct: 440 GRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSP-DLIS 498
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y VID + K GK +A +L M +GI + + SSI L GR+ + ++ + I+
Sbjct: 499 YSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIK 558
Query: 311 ----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+ D LY+ +I L + A F M+ GC P TY ML++G
Sbjct: 559 DTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKG 610
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 145/303 (47%), Gaps = 26/303 (8%)
Query: 139 CEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEAS 197
C ++ N ++ LC+ L ++ ++SE P+ Y +I G C G L A+
Sbjct: 247 CAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVAN 306
Query: 198 KIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK--RMDDLGLSTYRIVI 255
+I N M G +P++ + +++ + EA ++ M K +DD+ T+ I++
Sbjct: 307 EILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDV---TFNILV 363
Query: 256 DWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----K 311
D+ C+ G + + +LE+M G D +T +++I G G + EA +++ + K
Sbjct: 364 DFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCK 423
Query: 312 PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR------ 365
P+ Y ++KGL R +A ++ +MI++GC P T+ L+ L K+G
Sbjct: 424 PNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLIN-FLCKKGLVEQAIE 482
Query: 366 -------KGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
G P L+++ T+ + GL KAGK+ +A + + ++N+G+ Y+
Sbjct: 483 LLKQMLVNGCSPDLISYSTV-IDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACAL 541
Query: 418 SNE 420
S E
Sbjct: 542 SRE 544
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/422 (20%), Positives = 169/422 (40%), Gaps = 31/422 (7%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVN-DKTFKIALMTLAEVRELKKMVNFF 131
N+ TF +V + I E L EM + + + L + V
Sbjct: 110 NAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVL 169
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDV 190
M+ GC N V+ +C++ V EA L+ KL+ + + + ++Y ++KG C
Sbjct: 170 EAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMA 229
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLS 249
+ ++ + M P+I + +I + + +V QM D+ +
Sbjct: 230 KRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM- 288
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
Y +ID +CK G + A +L M G++ + + ++++ GL + R +EA +++ E+
Sbjct: 289 -YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEM 347
Query: 310 EKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------ 359
+ D L ++ L+ + ++ +M+ GC P + TY ++ G
Sbjct: 348 FQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLI 407
Query: 360 ------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
L G P TI + GL AG+ +DA + + +++ +G +N
Sbjct: 408 DEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTL 467
Query: 414 LHYYSNEEGVVMFEEVGKKLREVG----LADLADIFQRYGKKMATRERRR------NRAI 463
+++ + V E+ K++ G L + + GK T E N+ I
Sbjct: 468 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGI 527
Query: 464 EP 465
P
Sbjct: 528 SP 529
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 125/269 (46%), Gaps = 20/269 (7%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
+ PN + +++G C G + +A ++ + M+ +G P + ++E + ++
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
+V + M K L +V++ +C++G + +A +L ++ G EAD ++ ++++ G
Sbjct: 167 RVLEAMHAKGC-TLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKG 225
Query: 293 LLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
L R + ++++E+ + P+I ++ LI L R +V +M + GC P
Sbjct: 226 LCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPD 285
Query: 349 MHTYIMLL-----QGH-------LGKRGRKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYV 395
+ Y ++ +GH L + G P +V ++T+ GL A + +A + +
Sbjct: 286 IRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVL-KGLCSAERWKEAEELL 344
Query: 396 ERVMNRGVEVPRFDYNKFLHYYSNEEGVV 424
+ + + +N + ++ + G+V
Sbjct: 345 SEMFQKDCPLDDVTFNILVDFFC-QNGLV 372
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 134/292 (45%), Gaps = 7/292 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
N + +N ++ + + E L EM ++ ++D TF I + + + +++
Sbjct: 320 NVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELL 379
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDV 190
M GC + V+ C+ L+ EA L+ +S KPN ++Y ++KG C
Sbjct: 380 EQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSA 439
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G ++A ++ + M +G P+ + +I K ++A+++ + M V L +
Sbjct: 440 GRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSP-DLIS 498
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y VID + K GK +A +L M +GI + + SSI L GR+ + ++ + I+
Sbjct: 499 YSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIK 558
Query: 311 ----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+ D LY+ +I L + A F M+ GC P TY ML++G
Sbjct: 559 DTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKG 610
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 145/303 (47%), Gaps = 26/303 (8%)
Query: 139 CEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEAS 197
C ++ N ++ LC+ L ++ ++SE P+ Y +I G C G L A+
Sbjct: 247 CAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVAN 306
Query: 198 KIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR--MDDLGLSTYRIVI 255
+I N M G +P++ + +++ + EA ++ M K +DD+ T+ I++
Sbjct: 307 EILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDV---TFNILV 363
Query: 256 DWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----K 311
D+ C+ G + + +LE+M G D +T +++I G G + EA +++ + K
Sbjct: 364 DFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCK 423
Query: 312 PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR------ 365
P+ Y ++KGL R +A ++ +MI++GC P T+ L+ L K+G
Sbjct: 424 PNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLIN-FLCKKGLVEQAIE 482
Query: 366 -------KGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
G P L+++ T+ + GL KAGK+ +A + + ++N+G+ Y+
Sbjct: 483 LLKQMLVNGCSPDLISYSTV-IDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACAL 541
Query: 418 SNE 420
S E
Sbjct: 542 SRE 544
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/422 (20%), Positives = 169/422 (40%), Gaps = 31/422 (7%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVN-DKTFKIALMTLAEVRELKKMVNFF 131
N+ TF +V + I E L EM + + + L + V
Sbjct: 110 NAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVL 169
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDV 190
M+ GC N V+ +C++ V EA L+ KL+ + + + ++Y ++KG C
Sbjct: 170 EAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMA 229
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLS 249
+ ++ + M P+I + +I + + +V QM D+ +
Sbjct: 230 KRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM- 288
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
Y +ID +CK G + A +L M G++ + + ++++ GL + R +EA +++ E+
Sbjct: 289 -YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEM 347
Query: 310 EKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------ 359
+ D L ++ L+ + ++ +M+ GC P + TY ++ G
Sbjct: 348 FQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLI 407
Query: 360 ------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
L G P TI + GL AG+ +DA + + +++ +G +N
Sbjct: 408 DEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTL 467
Query: 414 LHYYSNEEGVVMFEEVGKKLREVG----LADLADIFQRYGKKMATRERRR------NRAI 463
+++ + V E+ K++ G L + + GK T E N+ I
Sbjct: 468 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGI 527
Query: 464 EP 465
P
Sbjct: 528 SP 529
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 93/190 (48%), Gaps = 5/190 (2%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
+ PN + +++G C G + +A ++ + M+ +G P + ++E + ++
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
+V + M K L +V++ +C++G + +A +L ++ G EAD ++ ++++ G
Sbjct: 167 RVLEAMHAKGC-TLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKG 225
Query: 293 LLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
L R + ++++E+ + P+I ++ LI L R +V +M + GC P
Sbjct: 226 LCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPD 285
Query: 349 MHTYIMLLQG 358
+ Y ++ G
Sbjct: 286 IRMYATIIDG 295
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 160/353 (45%), Gaps = 32/353 (9%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND----KTFKIALMTLAEVRELKKMVNF 130
+ +N ++D K++ +D +E+ + LV + L + +KK+++
Sbjct: 336 LNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDE 395
Query: 131 FHIMNDCGCEYSLEML--NKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGY 187
H G +++ N ++ LC+ ++EA L++ + + +KPN + Y ++ GY
Sbjct: 396 MH-----GSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGY 450
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C ++ A I+N M G EP I + +I + K DEA+ +F+ MR K +
Sbjct: 451 CLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIP-D 509
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
+++Y +ID +C G+I +L+EM G D +T + ++ +A +
Sbjct: 510 IASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFR 569
Query: 308 EIEK---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
+I + PD H ++ L + + + A + ++ GC P + TY +L+ L K G
Sbjct: 570 QIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINA-LCKDG 628
Query: 365 RKG--------------PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
G P + F+ I +G L++ ++ A K E ++ RG+
Sbjct: 629 SFGEAMLLLSKMEDNDRPPDAITFE-IIIGVLLQRNETDKAEKLREEMIARGL 680
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 115/219 (52%), Gaps = 6/219 (2%)
Query: 146 LNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
N ++ LC+ ++EA+ ++ +S+ KP+ + Y L++GYC ++ EA +++N M
Sbjct: 268 FNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMV 327
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
G EP + + +I+ + K DEAM +F+ + K + +++Y +ID +C G+I
Sbjct: 328 KRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPT-IASYNSLIDGLCNSGRI 386
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV----EEIEKPDISLYHGL 320
S +L+EM D +T + +I L GR+ EA V+ ++ KP+I Y+ +
Sbjct: 387 SHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAM 446
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
+ G A +F M+K G EP + Y +L+ G+
Sbjct: 447 MDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGY 485
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 108/457 (23%), Positives = 190/457 (41%), Gaps = 78/457 (17%)
Query: 6 GHLVRVCTILYQQQ---YSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQY 62
GH ++ Q Q SP + L +C F+ +H F S L Y
Sbjct: 69 GHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSH-------TAFAFSLLATILKSGY 121
Query: 63 TQKAQPCFAHNSITFNRMVD---IIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLA 119
QP N +TFN +++ I G F + L G L + T+ + L+
Sbjct: 122 ----QP----NLVTFNTIINGFCINGMIFKALDFCQNLLAQGY--LFDQFTYGTLINGLS 171
Query: 120 EVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEI 178
+ ++K ++ M + +L M + ++ LC+ V +A L ++ E I + +
Sbjct: 172 KNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAV 231
Query: 179 AYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
Y LI G C VG E +++ M E +P
Sbjct: 232 TYNSLIDGCCSVGRWQEVTQLLTKMVRENVDP---------------------------- 263
Query: 239 RVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR 298
DD T+ I+ID +CK G+I +A +L M KRG + D +T ++++ G +R
Sbjct: 264 -----DDY---TFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSREN 315
Query: 299 LREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIM 354
+ EA ++ + K PD+ Y+ LI G + + EA +F+E+ + PT+ +Y
Sbjct: 316 VHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNS 375
Query: 355 LLQG--------HLGK-----RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNR 401
L+ G H+ K G P +V ++ I + L K G+ L+A + +M +
Sbjct: 376 LIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYN-ILIDALCKEGRILEALGVLVMMMKK 434
Query: 402 GVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
GV+ YN + Y V + +++ ++ + GL
Sbjct: 435 GVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGL 471
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 140/299 (46%), Gaps = 8/299 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
+++T+N ++D + L +M R + +D TF I + L + + +
Sbjct: 229 DAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVL 288
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
+M+ G + + N +++ C R+ V EA+ L ++ + ++P+ + Y LI GYC
Sbjct: 289 AMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKT 348
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
+ EA ++ + ++ P+I + +I+ + K+ M + T
Sbjct: 349 KMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMH-GSAQPPDVVT 407
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y I+ID +CK G+I +A +L M K+G++ + +T ++++ G R + A + +
Sbjct: 408 YNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMV 467
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
K PDI Y+ LI G + EA +F+EM + P + +Y L+ G L GR
Sbjct: 468 KSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDG-LCNLGR 525
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 116/280 (41%), Gaps = 17/280 (6%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P + L+ +G A ++ + +G PSI +I +F + A +
Sbjct: 53 PPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSL 112
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
+ +K L T+ +I+ C G I +A + + +G D T ++I GL
Sbjct: 113 LATI-LKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLS 171
Query: 295 ARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
G+++ A +++E+EK P++ +Y LI GL + +A + ++ +RG
Sbjct: 172 KNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAV 231
Query: 351 TYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERV 398
TY L+ G L K R+ DP I + L K G+ L+A + +
Sbjct: 232 TYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMM 291
Query: 399 MNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
RG + YN + Y + E V E+ ++ + GL
Sbjct: 292 SKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGL 331
>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 582
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 178/376 (47%), Gaps = 23/376 (6%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
N++ +N ++D + K++ ++ ++ +M +R+ +D T + + +LK+ V
Sbjct: 209 NAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLL 268
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDV 190
H M + + +V C+ V EAK ++ + + + I + + Y L+ GYC V
Sbjct: 269 HKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLV 328
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
++ +A I++ M G ++ MI KI DEA+ +F+ MR +++ + T
Sbjct: 329 KEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIP-NVVT 387
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y +ID + K GKIS +++EM RG + +T +SI+ L + +A ++ ++
Sbjct: 388 YNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLK 447
Query: 311 ----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------- 359
+PD+ Y LIKGL + + +A +VF +++ +G ++TY +++QG
Sbjct: 448 DQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFD 507
Query: 360 -----LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
L K G P I + L + ++ A K + ++ RG+ D ++
Sbjct: 508 AALALLSKMEDNGCIPNAKTYEIVILSLFEKDENDMAEKLLREMIARGL----LDEKSYI 563
Query: 415 HYYSNEEGVVMFEEVG 430
+ S E GV+ G
Sbjct: 564 YLASKETGVMGMGAAG 579
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 121/299 (40%), Gaps = 56/299 (18%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
L + PN I + LIKG C G + +A + + +GF +I K+ +
Sbjct: 132 LKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRI 191
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
A+++ + + K + + Y ++ID MCK ++ A+ + +M + I D+ T +S
Sbjct: 192 TAALQLLKRVDGKLVQPNAV-MYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNS 250
Query: 289 IIYGLLARGRLREA----YKVVEEIEKP-------------------------------- 312
+IYG G+L+EA +K++ E P
Sbjct: 251 LIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKD 310
Query: 313 ---DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK------- 362
D+ Y+ L+ G ++ +A +F M RG + +Y ++ G L K
Sbjct: 311 IILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMING-LCKIKMVDEA 369
Query: 363 -------RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
R RK +V ++++ + GL K GK K V+ + +RG YN L
Sbjct: 370 VNLFEEMRCRKIIPNVVTYNSL-IDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSIL 427
>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 144/297 (48%), Gaps = 14/297 (4%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHIM 134
+N +++++ K +D +E V D +F I + L + E+ K FF M
Sbjct: 181 VYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNM 240
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK--LSEWIKPNEIAYGWLIKGYCDVGD 192
+ GC + N ++ C+ + + L+ + L + + P+ I Y +I GYC +GD
Sbjct: 241 GNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGD 300
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ-MMRVKRMDDLGLSTY 251
+ AS++++ M G +P+ + +I+ F K+ AM +++ M+ + + D + T+
Sbjct: 301 MKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPD--VVTF 358
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA------YKV 305
+ID C+ G+++Q + EEM R + + T + +I L R+REA K
Sbjct: 359 TSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKS 418
Query: 306 VEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
E + KP I Y+ +I G + + EA + EM ++ C P T+ +L+ G+ K
Sbjct: 419 SEVVPKPFI--YNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMK 473
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 80/178 (44%), Gaps = 4/178 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHI 133
+TF ++D + ++ + +EM R L N T+ + + L + +++ NF
Sbjct: 356 VTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRH 415
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGD 192
+ + N V+ C+ V EA +++ ++ E +P++I + LI G C G
Sbjct: 416 LKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGR 475
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
++EA + M + P ++ +I K +EA ++ Q K +LGLS+
Sbjct: 476 MVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQKL--NLGLSS 531
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 56/279 (20%), Positives = 102/279 (36%), Gaps = 59/279 (21%)
Query: 231 AMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
+K F+ R + +TY +++ +CK G A + + M GI D+ L ++
Sbjct: 92 GLKFFEFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLV 151
Query: 291 YGLLARGRLREAYKVVEEIE---------------------------------------K 311
G+L A + E+
Sbjct: 152 SSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFV 211
Query: 312 PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG----KRGR-- 365
PD+ ++ LI+GL R+ +A + F+ M GC P + +Y L+ G +G
Sbjct: 212 PDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDL 271
Query: 366 -------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYS 418
KG P V T + G K G A++ + +++ G++ F +N + +
Sbjct: 272 LKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFG 331
Query: 419 N----EEGVVMFEE---VGKKLREVGLADLADIFQRYGK 450
+VM+E+ +G V L D + R G+
Sbjct: 332 KVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGE 370
>gi|242091782|ref|XP_002436381.1| hypothetical protein SORBIDRAFT_10g001520 [Sorghum bicolor]
gi|241914604|gb|EER87748.1| hypothetical protein SORBIDRAFT_10g001520 [Sorghum bicolor]
Length = 546
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 141/292 (48%), Gaps = 12/292 (4%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N ++ N ++ + ++D + L EM +V D T+ L +L+ F
Sbjct: 203 NLVSCNILLKGLVGMGDLDAALKVLDEMTGWGIVPDVVTYTTVLTAYCAKGDLEGAQQLF 262
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
+ G M +V C R + +A ++ ++ + +KPNE+ Y +I+ C
Sbjct: 263 DDIVASGRRPDATMYTVLVDGYCHRGKLQDAARIMDEMEAAGVKPNEVTYSVVIEACCKE 322
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM--DDLGL 248
G IEA + M G+ P + K+++ + K EA ++++ M K + D+ +
Sbjct: 323 GKSIEACDLTREMLGAGYVPDTPLCAKVVDVLCQDGKAGEANEIWRQMVKKSVPPDNTVV 382
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV--- 305
ST +I W+CK G + +A + +E+ +RG LT +S+I GL G L+EA +V
Sbjct: 383 ST---LIYWLCKNGMVQEARGLFDEL-ERGFVPSLLTYNSLIIGLCENGELQEAGRVWDD 438
Query: 306 -VEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
VE +P+ Y LIKG ++ ++ E +F+EM+ +GC P+ Y L+
Sbjct: 439 MVERRYEPNAMTYEALIKGFCKIGKSNEGYALFKEMVAKGCTPSKFLYQALV 490
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 99/189 (52%), Gaps = 6/189 (3%)
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
+P+ Y L+ GYC G L +A++I + M G +P+ +IE K K EA
Sbjct: 271 RPDATMYTVLVDGYCHRGKLQDAARIMDEMEAAGVKPNEVTYSVVIEACCKEGKSIEACD 330
Query: 234 VF-QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
+ +M+ + D L V+D +C+ GK +A + +M K+ + DN +S++IY
Sbjct: 331 LTREMLGAGYVPDTPLCAK--VVDVLCQDGKAGEANEIWRQMVKKSVPPDNTVVSTLIYW 388
Query: 293 LLARGRLREAYKVVEEIEK---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
L G ++EA + +E+E+ P + Y+ LI GL +EA +V+ +M++R EP
Sbjct: 389 LCKNGMVQEARGLFDELERGFVPSLLTYNSLIIGLCENGELQEAGRVWDDMVERRYEPNA 448
Query: 350 HTYIMLLQG 358
TY L++G
Sbjct: 449 MTYEALIKG 457
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 131/283 (46%), Gaps = 26/283 (9%)
Query: 172 WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEA 231
+I PN ++ L+KG +GDL A K+ + MT G P + ++ + + A
Sbjct: 199 YITPNLVSCNILLKGLVGMGDLDAALKVLDEMTGWGIVPDVVTYTTVLTAYCAKGDLEGA 258
Query: 232 MKVF-QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
++F ++ R D + Y +++D C RGK+ A +++EM G++ + +T S +I
Sbjct: 259 QQLFDDIVASGRRPDATM--YTVLVDGYCHRGKLQDAARIMDEMEAAGVKPNEVTYSVVI 316
Query: 291 YGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
G+ EA + E+ PD L ++ L + +A EA +++R+M+K+
Sbjct: 317 EACCKEGKSIEACDLTREMLGAGYVPDTPLCAKVVDVLCQDGKAGEANEIWRQMVKKSVP 376
Query: 347 PTMHTYIMLLQGHLGKRG------------RKGPDP-LVNFDTIFVGGLVKAGKSLDAAK 393
P +T + L L K G +G P L+ ++++ + GL + G+ +A +
Sbjct: 377 PD-NTVVSTLIYWLCKNGMVQEARGLFDELERGFVPSLLTYNSLII-GLCENGELQEAGR 434
Query: 394 YVERVMNRGVEVPRFDYNKFLHYYS----NEEGVVMFEEVGKK 432
+ ++ R E Y + + + EG +F+E+ K
Sbjct: 435 VWDDMVERRYEPNAMTYEALIKGFCKIGKSNEGYALFKEMVAK 477
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 5/136 (3%)
Query: 147 NKVVKTL----CQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNL 202
N VV TL C+ +V EA+ L +L P+ + Y LI G C+ G+L EA ++W+
Sbjct: 379 NTVVSTLIYWLCKNGMVQEARGLFDELERGFVPSLLTYNSLIIGLCENGELQEAGRVWDD 438
Query: 203 MTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRG 262
M + +EP+ + +I+ F KI K +E +F+ M K Y+ ++D + +
Sbjct: 439 MVERRYEPNAMTYEALIKGFCKIGKSNEGYALFKEMVAKGCTPSKF-LYQALVDSLSEPS 497
Query: 263 KISQAYTMLEEMFKRG 278
+T++E + G
Sbjct: 498 HDDTVWTIVEAVALSG 513
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Query: 142 SLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIW 200
SL N ++ LC+ + EA + + E +PN + Y LIKG+C +G E ++
Sbjct: 412 SLLTYNSLIIGLCENGELQEAGRVWDDMVERRYEPNAMTYEALIKGFCKIGKSNEGYALF 471
Query: 201 NLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVI 255
M +G PS + ++++ + + DD + + + + D L + I I
Sbjct: 472 KEMVAKGCTPSKFLYQALVDSLSEPSHDDTVWTIVEAVALSGQDFLDGQLWEIFI 526
>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
Length = 719
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/387 (21%), Positives = 166/387 (42%), Gaps = 21/387 (5%)
Query: 56 VYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIA 114
++ F+Q KA N+ T ++ S + +E L + + L + T+
Sbjct: 210 LFEFYQEMIKAGTASDANTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKL 269
Query: 115 LMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WI 173
+ + + M H M ++ +++ LC+ + +EA + L +
Sbjct: 270 IAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGY 329
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
P+ + Y +I G C++G EA K+W M D+G +P+ + M+ K + A +
Sbjct: 330 APDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACE 389
Query: 234 VFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
++ M K ++ +I+ + +C RGK +A+ + ++M + GI+AD +T +S+I G
Sbjct: 390 LYNEMCNKGYGTTTVTCNKIISE-LCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGF 448
Query: 294 LARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
G++ E ++ E+ +P +SLY LI + A ++ +M +G P
Sbjct: 449 CKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNA 508
Query: 350 HTYIMLLQGHLGKRG-------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVE 396
+TY +L G L K G KG + L GKS +A++ +
Sbjct: 509 YTYDTMLHGSL-KSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFK 567
Query: 397 RVMNRGVEVPRFDYNKFLHYYSNEEGV 423
++ G++ YN + + E V
Sbjct: 568 KMSETGIKADAITYNSLIRGFCKEGKV 594
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 141/315 (44%), Gaps = 13/315 (4%)
Query: 58 LFFQYTQKA-QPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIAL 115
L+F+ K QP N+ T+N M+ KS + + E EM + T +
Sbjct: 355 LWFEMMDKGMQP----NAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKII 410
Query: 116 MTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIK 174
L + + F M++ G + N +++ C+ V E L+ +L ++ +
Sbjct: 411 SELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQ 470
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+ Y LI C GD A ++ M+ +G P+ D M+ K + D E ++
Sbjct: 471 PSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLK-SGDFEHVRE 529
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
+ +T +I +C RGK +A M ++M + GI+AD +T +S+I G
Sbjct: 530 LYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFC 589
Query: 295 ARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
G++ ++ ++ E+ +P S Y LI L + A A +++ +M+ +G EP +
Sbjct: 590 KEGKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHAN 649
Query: 351 TYIMLLQGHLGKRGR 365
L+ G L K+GR
Sbjct: 650 LREHLISG-LCKQGR 663
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/273 (20%), Positives = 112/273 (41%), Gaps = 28/273 (10%)
Query: 155 QRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDV 214
+ +L+ E ++K N G LI+ +CD G + ++ N G +P
Sbjct: 206 KTELLFEFYQEMIKAGTASDANTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPT 265
Query: 215 VDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEM 274
+K+I F + +V M + R + TY+ +I+ +CK + +AY + ++
Sbjct: 266 YNKLIAGFCQAKNYASMSEVLHTM-IARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDL 324
Query: 275 FKRGIEADNLTLSSIIYGLLARGRLREA----YKVVEEIEKPDISLYHGLIKGLLRLRRA 330
RG D + +++I+GL G EA ++++++ +P+ Y+ ++ G L+
Sbjct: 325 KDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDF 384
Query: 331 REATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLD 390
A +++ EM +G T T + L GKS +
Sbjct: 385 ERACELYNEMCNKGYGTTTVTC-----------------------NKIISELCSRGKSDE 421
Query: 391 AAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGV 423
A + +++ G++ YN + + E V
Sbjct: 422 AFEVFKKMSETGIQADAITYNSLIRGFCKEGKV 454
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 176/381 (46%), Gaps = 21/381 (5%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALMTLAEVRELKKMVNFFHI 133
+++N +++ + K + ++ + L EM G N T+ I + L + +++ +
Sbjct: 11 VSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLLGE 70
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M G E + + + ++ C + + K L ++ E I PN + Y LI G+C G
Sbjct: 71 MKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGL 130
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
EA+ + + MT+ G +P + MI K + +A+ +F +M ++ ++ TY
Sbjct: 131 WREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLM-TEKGEEPSTVTYN 189
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI--- 309
++I+ +CK G I A+ + E M ++G + ++ +++I GL G+L EA K+ +
Sbjct: 190 VLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLED 249
Query: 310 ---EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------- 359
+PD+ ++ +I+GL + R +A +++ MI+RG + T +L+ +
Sbjct: 250 GNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIID 309
Query: 360 ----LGKRGRK-GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
L KR K G P ++ + G K A R+ G+ FDYN +
Sbjct: 310 KAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLM 369
Query: 415 HYYSNEEGVVMFEEVGKKLRE 435
E + + ++++E
Sbjct: 370 ASLCKESSLEQARRLFQEMKE 390
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 114/264 (43%), Gaps = 54/264 (20%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
I P+ ++Y +I G C L +A + M EP+ +F
Sbjct: 6 ILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPN---------SF---------- 46
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
TY I++D +CK G++ +A +L EM ++G+E D + S++I G
Sbjct: 47 -----------------TYCILMDGLCKEGRVEEAMRLLGEMKRKGLEVDVVVYSTLISG 89
Query: 293 LLARGRLREAYKVVEE-IEK---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
++G L + +E +EK P++ +Y LI G + REAT V M +RG +P
Sbjct: 90 FCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPD 149
Query: 349 MHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYV 395
++TY ++ G L K GR KG +P + + GL K G DA K
Sbjct: 150 VYTYTCMI-GGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIF 208
Query: 396 ERVMNRGVEVPRFDYNKFLHYYSN 419
E ++ +G + YN + N
Sbjct: 209 ETMLEKGKRLEVVSYNTLIMGLCN 232
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 145/315 (46%), Gaps = 16/315 (5%)
Query: 54 RPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNI-DLF--WETLQEMGRR-RLVNDK 109
+ + LF T+K + +++T+N +++ + K I D F +ET+ E G+R +V+
Sbjct: 168 KALDLFDLMTEKGEE---PSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYN 224
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCG-CEYSLEMLNKVVKTLCQRKLVVEAKYLILK 168
T + L ++ E K+ F ++ D E + N V++ LC+ + +A +
Sbjct: 225 TLIMGLCNNGKLDEAMKL--FSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDT 282
Query: 169 LSEWIK-PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINK 227
+ E N LI Y G + +A ++W + G PS MI+ F K++
Sbjct: 283 MIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHM 342
Query: 228 DDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLS 287
+ A +F M++ + L Y ++ +CK + QA + +EM + E D ++ +
Sbjct: 343 LNFAKGLFSRMKISGLSPT-LFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFN 401
Query: 288 SIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
+I G L G + A +++ ++++ PD Y I L +L + EA F MI
Sbjct: 402 IMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIAS 461
Query: 344 GCEPTMHTYIMLLQG 358
G P H Y L++G
Sbjct: 462 GITPDNHVYDSLIKG 476
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 166/372 (44%), Gaps = 30/372 (8%)
Query: 97 LQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQ 155
L M R + D T+ + L + +K ++ F +M + G E S N ++ LC+
Sbjct: 138 LHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCK 197
Query: 156 RKLVVEAKYLILKLSEWIKPNEI-AYGWLIKGYCDVGDLIEASKIWNLMTDEG--FEPSI 212
+ +A + + E K E+ +Y LI G C+ G L EA K+++ + ++G EP +
Sbjct: 198 EGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDV 257
Query: 213 DVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLE 272
+ +I+ K + D+A++++ M ++R L T I+I K G I +A + +
Sbjct: 258 ITFNTVIQGLCKEGRLDKAVEIYDTM-IERGSFGNLFTCHILIGEYIKSGIIDKAMELWK 316
Query: 273 EMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLR 328
+ K G+ + T S +I G L A + ++ P + Y+ L+ L +
Sbjct: 317 RVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKES 376
Query: 329 RAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG-------------RKGPDPLVNFD 375
+A ++F+EM + CEP ++ +++ G L K G + G P
Sbjct: 377 SLEQARRLFQEMKESNCEPDTISFNIMIDGTL-KAGDIHSAKELLNDMQQMGLTPDAYTY 435
Query: 376 TIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYS-NEEGVVMFEEVGKKLR 434
+ F+ L K G+ +A + ++ G+ Y+ + + N+E EEV LR
Sbjct: 436 SSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDE----IEEVINLLR 491
Query: 435 EVGLADLADIFQ 446
+ +AD+ I
Sbjct: 492 Q--MADMGVILD 501
Score = 42.0 bits (97), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 56/277 (20%), Positives = 106/277 (38%), Gaps = 13/277 (4%)
Query: 39 HEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQ 98
+ + +CNN L + LF + + ITFN ++ + K +D E
Sbjct: 224 NTLIMGLCNNGKLD-EAMKLFSSLLEDGNY-VEPDVITFNTVIQGLCKEGRLDKAVEIYD 281
Query: 99 EMGRR-RLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRK 157
M R N T I + + + K + + ++ G S + ++ C+
Sbjct: 282 TMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMH 341
Query: 158 LVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVD 216
++ AK L ++ + P Y L+ C L +A +++ M + EP +
Sbjct: 342 MLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFN 401
Query: 217 KMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLE 272
MI+ K A ++ M +GL+ TY I+ + K G++ +A +
Sbjct: 402 IMIDGTLKAGDIHSAKELLN-----DMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFD 456
Query: 273 EMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
M GI DN S+I G + E ++ ++
Sbjct: 457 SMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQM 493
>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 144/297 (48%), Gaps = 14/297 (4%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHIM 134
+N +++++ K +D +E V D +F I + L + E+ K FF M
Sbjct: 181 VYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNM 240
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK--LSEWIKPNEIAYGWLIKGYCDVGD 192
+ GC + N ++ C+ + + L+ + L + + P+ I Y +I GYC +GD
Sbjct: 241 GNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGD 300
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ-MMRVKRMDDLGLSTY 251
+ AS++++ M G +P+ + +I+ F K+ AM +++ M+ + + D + T+
Sbjct: 301 MKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPD--VVTF 358
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA------YKV 305
+ID C+ G+++Q + EEM R + + T + +I L R+REA K
Sbjct: 359 TSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKS 418
Query: 306 VEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
E + KP I Y+ +I G + + EA + EM ++ C P T+ +L+ G+ K
Sbjct: 419 SEVVPKPFI--YNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMK 473
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 80/178 (44%), Gaps = 4/178 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHI 133
+TF ++D + ++ + +EM R L N T+ + + L + +++ NF
Sbjct: 356 VTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRH 415
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGD 192
+ + N V+ C+ V EA +++ ++ E +P++I + LI G C G
Sbjct: 416 LKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGR 475
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
++EA + M + P ++ +I K +EA ++ Q K +LGLS+
Sbjct: 476 MVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQKL--NLGLSS 531
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 56/279 (20%), Positives = 102/279 (36%), Gaps = 59/279 (21%)
Query: 231 AMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
+K F+ R + +TY +++ +CK G A + + M GI D+ L ++
Sbjct: 92 GLKFFEFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLV 151
Query: 291 YGLLARGRLREAYKVVEEIE---------------------------------------K 311
G+L A + E+
Sbjct: 152 SSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFV 211
Query: 312 PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG----KRGR-- 365
PD+ ++ LI+GL R+ +A + F+ M GC P + +Y L+ G +G
Sbjct: 212 PDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDL 271
Query: 366 -------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYS 418
KG P V T + G K G A++ + +++ G++ F +N + +
Sbjct: 272 LKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFG 331
Query: 419 N----EEGVVMFEE---VGKKLREVGLADLADIFQRYGK 450
+VM+E+ +G V L D + R G+
Sbjct: 332 KVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGE 370
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 172/386 (44%), Gaps = 25/386 (6%)
Query: 70 FAHNSITFNRMVD-IIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMV 128
F + ITFN +++ + + R ++ + M R T + + L ++ + +
Sbjct: 170 FKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAI 229
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGY 187
+ M + CE + + ++ +LC+ +LV EA L + S I P + Y LI G
Sbjct: 230 VWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGM 289
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDL 246
C+ G +AS ++ M + +P + +++ K EA+ VF +M+++ D+
Sbjct: 290 CNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDI 349
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
TY +I +CK ++ T+L EM R I D +T S + +G + EA ++
Sbjct: 350 --VTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSII 407
Query: 307 ----EEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH--- 359
E +P++ Y+ L+ G + EA +VF M+ +GC P + +Y +L++G+
Sbjct: 408 NLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKS 467
Query: 360 ---------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY 410
+ KG P T + GL +AG+ A + +++ + G Y
Sbjct: 468 ERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITY 527
Query: 411 NKFLHYYSN----EEGVVMFEEVGKK 432
+ L + +E + +FE + K
Sbjct: 528 STLLSGFCKHGHLDEALALFEALKKS 553
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 161/377 (42%), Gaps = 56/377 (14%)
Query: 67 QPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKK 126
QP +++ N + I GK+ ++ + + E+ V ++ I + +L + R + +
Sbjct: 206 QPTVYTHTMIVNGLCKI-GKTSAAIVWMKKMVELDCEPEV--VSYSIIIDSLCKNRLVNE 262
Query: 127 MVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIK 185
V+ F+ M G ++ N ++ +C +A L ++ EW +KP+ + + L+
Sbjct: 263 AVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVD 322
Query: 186 GYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD 245
C G ++EA ++ M EP I +I K + E+ + M + +
Sbjct: 323 ALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRP 382
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
+ T+ I +D CK+G +S+A +++ M +RG+ + +T +S++ G ++ EA KV
Sbjct: 383 -DVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKV 441
Query: 306 ----VEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH-- 359
V + PD+ Y+ LIKG + R EA Q+F EM +G P T+ L+ G
Sbjct: 442 FDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQ 501
Query: 360 ----------LGKRGRKG-PDPLVNFDT-------------------------------- 376
K G G P L+ + T
Sbjct: 502 AGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVI 561
Query: 377 --IFVGGLVKAGKSLDA 391
I +GG+ KAGK DA
Sbjct: 562 CKILLGGMCKAGKLEDA 578
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 144/325 (44%), Gaps = 20/325 (6%)
Query: 111 FKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS 170
F L L ++ +V+ + M G S+ L ++ LC LV ++ K+
Sbjct: 107 FNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIF 166
Query: 171 EW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD 229
+ KP+ I + LI G C G ++EA + + + G++P++ ++ KI K
Sbjct: 167 KLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTS 226
Query: 230 EAMKVFQMMRVKRMD-DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
A + M ++ +D + + +Y I+ID +CK +++A + M GI +T +S
Sbjct: 227 AA--IVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNS 284
Query: 289 IIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+IYG+ G+ ++A + +E+ KPD+ + L+ L + EA VF +MI+
Sbjct: 285 LIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIA 344
Query: 345 CEPTMHTYIMLLQGHLGKRGRKGPDPLVN------------FDTIFVGGLVKAGKSLDAA 392
EP + TY L+ G K L+N +I+V K G +A
Sbjct: 345 MEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQ 404
Query: 393 KYVERVMNRGVEVPRFDYNKFLHYY 417
+ ++ RG+ YN + Y
Sbjct: 405 SIINLMIERGLRPNVVTYNSLMDGY 429
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 103/203 (50%), Gaps = 6/203 (2%)
Query: 150 VKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGF 208
V C++ +V EA+ +I L + ++PN + Y L+ GYC + EA K++++M ++G
Sbjct: 391 VDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGC 450
Query: 209 EPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAY 268
P + + +I+ + K + DEA ++F M K + + T+ +I +C+ G+ A
Sbjct: 451 APDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSI-THTTLISGLCQAGRPYAAK 509
Query: 269 TMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISLYHGLIK----GL 324
+ ++M G D +T S+++ G G L EA + E ++K + H + K G+
Sbjct: 510 ELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGM 569
Query: 325 LRLRRAREATQVFREMIKRGCEP 347
+ + +A ++F + +P
Sbjct: 570 CKAGKLEDAKELFSSLSIEELQP 592
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 93/210 (44%), Gaps = 3/210 (1%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHI 133
+TF+ VD+ K + + M R L N T+ + ++ + F I
Sbjct: 385 VTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDI 444
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGD 192
M + GC + N ++K C+ + + EAK L ++S + + PN I + LI G C G
Sbjct: 445 MVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGR 504
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
A +++ M G P + ++ F K DEA+ +F+ ++ ++ + +
Sbjct: 505 PYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHV-ICK 563
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEAD 282
I++ MCK GK+ A + + ++ D
Sbjct: 564 ILLGGMCKAGKLEDAKELFSSLSIEELQPD 593
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 63/145 (43%), Gaps = 4/145 (2%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVN 129
A + +++N ++ KS ID + EM + L N T + L +
Sbjct: 451 APDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKE 510
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI--LKLSEWIKPNEIAYGWLIKGY 187
F M GC L + ++ C+ + EA L LK S+ +KPN + L+ G
Sbjct: 511 LFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQ-LKPNHVICKILLGGM 569
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSI 212
C G L +A ++++ ++ E +P +
Sbjct: 570 CKAGKLEDAKELFSSLSIEELQPDV 594
>gi|6721172|gb|AAF26800.1|AC016829_24 hypothetical protein [Arabidopsis thaliana]
Length = 572
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 173/389 (44%), Gaps = 38/389 (9%)
Query: 25 RLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDII 84
RL S NL+ ++ + F WR ++ + + H+S ++ VDI+
Sbjct: 137 RLSSDEICKRVNLSDGLVHKLLHRFRDDWRSALGILKWAESCKG-HKHSSDAYDMAVDIL 195
Query: 85 GKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLE 144
GK++ D E ++ M +LV T + A E ++ V F + + G E + E
Sbjct: 196 GKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTE 255
Query: 145 MLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNL-- 202
+N ++ TLC+ K V +A+ ++L+L I PN + I G+C + EA +W +
Sbjct: 256 SMNLLLDTLCKEKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEA--LWTIQE 313
Query: 203 MTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWM 258
M GF P + +I + + E +KV++M+ M+ G TY ++ +
Sbjct: 314 MKGHGFRPCVISYTTIIRCYC---QQFEFIKVYEML--SEMEANGSPPNSITYTTIMSSL 368
Query: 259 CKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDI---- 314
+ + +A + M + G + D+L + +I+ L GRL EA +V +E P++
Sbjct: 369 NAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVF-RVEMPELGVSI 427
Query: 315 --SLYHGLIKGLLRLRRAREATQVFREMIKRG-CEPTMHTYIMLLQGHLGKRGRKGPDPL 371
S Y+ +I +A ++ +EM C P +HTY LL+ KRG
Sbjct: 428 NTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCF-KRG------- 479
Query: 372 VNFDTIFVGGLVKA-----GKSLDAAKYV 395
D + VG L+K SLD + Y
Sbjct: 480 ---DVVEVGKLLKEMVTKHHLSLDESTYT 505
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 109/252 (43%), Gaps = 8/252 (3%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEM---GRRRLVNDKTFKIALMTLAEVRELKKMVN 129
N+ TFN + K+ ++ T+QEM G R V ++ + + E K+
Sbjct: 287 NAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCV--ISYTTIIRCYCQQFEFIKVYE 344
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYC 188
M G + ++ +L +K EA + ++ KP+ + Y LI
Sbjct: 345 MLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLA 404
Query: 189 DVGDLIEASKIWNL-MTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
G L EA +++ + M + G + + MI + +++D+A+++ + M + +
Sbjct: 405 RAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPD 464
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMF-KRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
+ TY+ ++ KRG + + +L+EM K + D T + +I L AY +
Sbjct: 465 VHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLF 524
Query: 307 EEIEKPDISLYH 318
EE+ DI+ H
Sbjct: 525 EEMISQDITPRH 536
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 92/222 (41%), Gaps = 5/222 (2%)
Query: 94 WETLQEM-GRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKT 152
+E L EM N T+ + +L +E ++ + M GC+ N ++ T
Sbjct: 343 YEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHT 402
Query: 153 LCQRKLVVEAKYLI-LKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGF-E 209
L + + EA+ + +++ E + N Y +I YC + +A ++ M
Sbjct: 403 LARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCN 462
Query: 210 PSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYT 269
P + ++ + FK E K+ + M K L STY +I +C+ AY
Sbjct: 463 PDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYC 522
Query: 270 MLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK 311
+ EEM + I + T ++ + + + E+ + +E I K
Sbjct: 523 LFEEMISQDITPRHRT-CLLLLEEVKKKNMHESAERIEHIMK 563
>gi|414591144|tpg|DAA41715.1| TPA: hypothetical protein ZEAMMB73_506058 [Zea mays]
Length = 521
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 145/318 (45%), Gaps = 25/318 (7%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
N++ +N ++D + ++ E L+ M + T+ I + +L+ R++ K+ F
Sbjct: 165 NALCYNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALF 224
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQR-KLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDV 190
+ M + + V+ C+ + AK L + ++PNE YG LIKG+C +
Sbjct: 225 NEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLIKGFCKI 284
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR-------VKRM 243
G + A + M +G + + + MI+ + + D+A+K+ M +
Sbjct: 285 GQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKIGVELNIYTY 344
Query: 244 DDLGLS-----------TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
+ L TY +I CK G + +A + EM ++G LT S +I+G
Sbjct: 345 NTLACGLCRMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVLTYSVMIHG 404
Query: 293 LLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
+GR+REA + +E+EK PD+ Y L+ G + A ++F EM +RG EP
Sbjct: 405 YAKKGRIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPN 464
Query: 349 MHTYIMLLQGHLGKRGRK 366
+ Y L+ G L K GR
Sbjct: 465 VVAYTALISG-LAKEGRS 481
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 20/195 (10%)
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDL 193
M G E ++ N + LC+ +V PN + Y LI +C GD+
Sbjct: 332 MEKIGVELNIYTYNTLACGLCRMGVV---------------PNYVTYTTLISIHCKDGDM 376
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
+EA +++ M ++G PS+ MI + K + EA + + M K + TY
Sbjct: 377 VEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAERFRKEMEKKGFVP-DVYTYAS 435
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK-- 311
++ C GK+ A + EEM +RG E + + +++I GL GR A+++ +++ K
Sbjct: 436 LVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAG 495
Query: 312 --PDISLYHGLIKGL 324
PD SLY L+ L
Sbjct: 496 LIPDDSLYSALVGSL 510
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 39/145 (26%)
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR---GRLREAYKVVE-- 307
+V+D +CK G++ A +L++M + G+ + L +S++ + + GR++E +++E
Sbjct: 136 VVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENE 195
Query: 308 --------------------EIEK--------------PDISLYHGLIKGLLRLRRAREA 333
+I K D+ LY +I R R A
Sbjct: 196 GIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRA 255
Query: 334 TQVFREMIKRGCEPTMHTYIMLLQG 358
+V E + G EP TY +L++G
Sbjct: 256 AKVLDECVGNGVEPNERTYGVLIKG 280
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 99/445 (22%), Positives = 181/445 (40%), Gaps = 68/445 (15%)
Query: 39 HEFFLQICNNFPLSWRPVYLFFQYT----QKAQPCFA--HNSITFNRMVDIIGKSRNIDL 92
H+ + + ++F S+ LF + P F +++ +N +++++ + + L
Sbjct: 109 HQVRVGVVHSFLESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLNVLVEGSKMKL 168
Query: 93 FWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIMNDCGCE-----YSLEML 146
EMG R + D TF + L +++ V M+ G ++ M
Sbjct: 169 LETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQ 228
Query: 147 NKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDE 206
V + + L V+A+ L + S P ++ LI GYC +G + +A
Sbjct: 229 GFVEEGSIKAALRVKARMLEMGCS----PTKVTVNVLINGYCKLGRVEDALGYIQQEIAN 284
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQ 266
GFEP + + + A+KV +M V+ D + TY IV++ +CK G++ +
Sbjct: 285 GFEPDQITYNTFVNGLCQNGHVGHALKVMDVM-VQEGHDPDVFTYNIVVNCLCKNGQLEE 343
Query: 267 AYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIK 322
A +L +M +RG D T +++I L + RL EA + ++ PD+ ++ LI
Sbjct: 344 AKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILIN 403
Query: 323 GLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG--HLGKRGRK-----------GPD 369
L ++ + A ++F EM GC P TY L+ LGK G+ P
Sbjct: 404 ALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPR 463
Query: 370 PLVNFDTIFVG----------------------------------GLVKAGKSLDAAKYV 395
V ++TI G GL K + DA + +
Sbjct: 464 STVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLI 523
Query: 396 ERVMNRGVEVPRFDYNKFLHYYSNE 420
++++ G++ YN L +Y +
Sbjct: 524 SQMISEGLQPNNITYNSILTHYCKQ 548
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 139/290 (47%), Gaps = 26/290 (8%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N VV LC+ + EAK ++ ++ E P+ + LI C L EA + +T
Sbjct: 329 NIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTL 388
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM--DDLGLSTYRIVIDWMCKRGK 263
+G P + + +I K+ A+++F+ M+ D++ TY +ID +C GK
Sbjct: 389 KGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEV---TYNTLIDNLCSLGK 445
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDIS----LYHG 319
+ +A +L+EM G +T ++II GL + R+ EA +V ++++ IS ++
Sbjct: 446 LGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNT 505
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG--RKGPDPL------ 371
LI GL + +R +A Q+ +MI G +P TY +L H K+G +K D L
Sbjct: 506 LIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILT-HYCKQGDIKKAADILQTMTAN 564
Query: 372 ------VNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
V + T+ + GL KAG++ A K + + +G+ YN +
Sbjct: 565 GFEVDVVTYGTL-INGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQ 613
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 133/292 (45%), Gaps = 8/292 (2%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIM 134
TFN +++ + K + L +EM D+ T+ + L + +L K ++ M
Sbjct: 397 TFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEM 456
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDL 193
GC S N ++ LC++ + EA+ + ++ + I N I + LI G C +
Sbjct: 457 ESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRI 516
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
+A+++ + M EG +P+ + ++ + K +A + Q M + + + TY
Sbjct: 517 DDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFE-VDVVTYGT 575
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI---- 309
+I+ +CK G+ A +L M +G+ A + +I L R R+A + E+
Sbjct: 576 LINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVG 635
Query: 310 EKPDISLYHGLIKGLLRLRRA-REATQVFREMIKRGCEPTMHTYIMLLQGHL 360
E PD Y + +GL R + REA EM+ +G P ++ ML +G L
Sbjct: 636 EPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSFRMLAEGLL 687
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 158/359 (44%), Gaps = 22/359 (6%)
Query: 6 GHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQK 65
GH ++V ++ Q+ + P+ ++ + +C +C N L L +
Sbjct: 307 GHALKVMDVMVQEGHDPDVFTYNIVVNC-----------LCKNGQLEEAKGILNQMVERG 355
Query: 66 AQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVREL 124
P + TFN ++ + ++ + +++ + L D TF I + L +V +
Sbjct: 356 CLP----DITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDP 411
Query: 125 KKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKP-NEIAYGWL 183
+ + F M GC N ++ LC + +A L+ ++ P + + Y +
Sbjct: 412 QLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTI 471
Query: 184 IKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM 243
I G C + EA ++++ M +G + + +I+ K + D+A ++ M + +
Sbjct: 472 IDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGL 531
Query: 244 DDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
+ TY ++ CK+G I +A +L+ M G E D +T ++I GL GR + A
Sbjct: 532 QPNNI-TYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVAL 590
Query: 304 KVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
K++ + + Y+ +I+ L R R+A +FREM + G P TY ++ +G
Sbjct: 591 KLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRG 649
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 125/273 (45%), Gaps = 15/273 (5%)
Query: 65 KAQPCFAHNSITFNRMVD---IIGK-SRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAE 120
K+ C + +T+N ++D +GK + +DL E R V T L
Sbjct: 422 KSSGC-TPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMR 480
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIA 179
+ E +++ F M+ G + N ++ LC+ K + +A LI ++ SE ++PN I
Sbjct: 481 IEEAEEV---FDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNIT 537
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
Y ++ YC GD+ +A+ I MT GFE + +I K + A+K+ + MR
Sbjct: 538 YNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMR 597
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL-ARGR 298
+K M Y VI + +R A + EM + G D T + GL G
Sbjct: 598 IKGMRATP-KAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGS 656
Query: 299 LREAYK-VVEEIEK---PDISLYHGLIKGLLRL 327
+REA+ ++E ++K P+ S + L +GLL L
Sbjct: 657 IREAFDFLLEMVDKGFIPEFSSFRMLAEGLLNL 689
>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 128/270 (47%), Gaps = 18/270 (6%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
LS+ + P +G ++K C ++ A + MT G P+ V +I + N+
Sbjct: 210 LSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQV 269
Query: 229 DEAMKVFQMMRVKR-MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLS 287
EA+K+ + M V M D+ T+ VI +CK KI A +++ M RG DN+T
Sbjct: 270 SEALKLLEEMFVMGCMPDV--QTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYG 327
Query: 288 SIIYGLLARGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFRE-MIKRGCE 346
+++GL G+L EA K++ +I P+ ++ + LI G + + +EA E MI G +
Sbjct: 328 FLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQ 387
Query: 347 PTMHTYIMLLQGHLGKRG-------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAK 393
P + TY +L+ G L K G R+G +P V I V GL KAG +A
Sbjct: 388 PDIFTYNILMHG-LCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGL 446
Query: 394 YVERVMNRGVEVPRFDYNKFLHYYSNEEGV 423
+ + RG+ + YN + +E V
Sbjct: 447 VLHEMSARGLTINSVIYNCLICALCRKEKV 476
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 168/378 (44%), Gaps = 30/378 (7%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHIM 134
TF ++ + +D L++M + V N ++ + L++ ++ + + M
Sbjct: 220 TFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEM 279
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGDL 193
GC ++ N V+ LC+ + +A L+ + L P+ + YG+L+ G C +G L
Sbjct: 280 FVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKL 339
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
EA KI + P+ +++ +I + + EA + + TY I
Sbjct: 340 NEARKILIKIPC----PNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNI 395
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPD 313
++ +CK G +S A ++ EM +RG E + +T + ++ GL G L EA V+ E+
Sbjct: 396 LMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARG 455
Query: 314 IS----LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR---- 365
++ +Y+ LI L R + A + EM +GC+P + TY L+ G L K R
Sbjct: 456 LTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYG-LCKVDRIDEA 514
Query: 366 ----------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
V ++T+ + L++ G A V ++ RG + + YN +
Sbjct: 515 FRLFHNMLLDGAVANNVTYNTL-IHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIK 573
Query: 416 YYSN----EEGVVMFEEV 429
+ E+G+ ++E++
Sbjct: 574 AFCKVGNIEKGLELYEQM 591
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 141/297 (47%), Gaps = 23/297 (7%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N ++ LC+ + A+ L+ ++S +PN I Y L+ G C G L EA + + M+
Sbjct: 394 NILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSA 453
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKIS 265
G + + + +I + K A+ + M K L TY +I +CK +I
Sbjct: 454 RGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKP-DLFTYNSLIYGLCKVDRID 512
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISL----YHGLI 321
+A+ + M G A+N+T +++I+ LL RG ++A +V ++ +L Y+GLI
Sbjct: 513 EAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLI 572
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR-------------KGP 368
K ++ + +++ +MI G + +++ G L K G+ +G
Sbjct: 573 KAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMING-LCKVGKVDNAFEFLRDAINRGF 631
Query: 369 DP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVV 424
P +V ++++ + GL K G+ +A +R+ GV F YN F+ + +EG+V
Sbjct: 632 VPDIVTYNSV-LNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQC-KEGMV 686
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 130/292 (44%), Gaps = 11/292 (3%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
N IT+ +V+ + K+ ++ L EM R L +N + + L ++ +N
Sbjct: 424 NVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLL 483
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDV 190
M GC+ L N ++ LC+ + EA L L + N + Y LI
Sbjct: 484 SEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRR 543
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G +A + N M G + +I+ F K+ ++ +++++ M MD LG T
Sbjct: 544 GAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMI---MDGLGADT 600
Query: 251 Y--RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
I+I+ +CK GK+ A+ L + RG D +T +S++ GL GR++EA + +
Sbjct: 601 ISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDR 660
Query: 309 IE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
++ +PD Y+ I + +A F I+ G P+ T+ +L+
Sbjct: 661 LQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLV 712
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 101/238 (42%), Gaps = 7/238 (2%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHIM 134
T+N ++ + K ID + M V N+ T+ + L +K + + M
Sbjct: 497 TYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDM 556
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDL 193
GC N ++K C+ + + L ++ + + + I+ +I G C VG +
Sbjct: 557 LFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKV 616
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK--RMDDLGLSTY 251
A + + GF P I + ++ K+ + EA+ +F ++V+ R D TY
Sbjct: 617 DNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAF---TY 673
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
I W CK G ++ A + + G NLT + ++Y LL + + V++E+
Sbjct: 674 NTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 72/185 (38%), Gaps = 19/185 (10%)
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEM-----FKRGIEADNLTLSSIIYGLLARGRLREAY 303
S + I++ K G+ QA +L +M + ++ +L L ++ G + Y
Sbjct: 148 SIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFY 207
Query: 304 KVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
++ + P + + ++K L A + R+M K GC P Y L+ L ++
Sbjct: 208 DMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHA-LSQK 266
Query: 364 GR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY 410
+ G P V + GL K K DA K V+R++ RG Y
Sbjct: 267 NQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTY 326
Query: 411 NKFLH 415
LH
Sbjct: 327 GFLLH 331
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 156/331 (47%), Gaps = 40/331 (12%)
Query: 124 LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQR---KLVVEA-KYLILKLSEW---IKPN 176
+ K F M GC ++ ++K LCQ K+ +E K ++ S + KPN
Sbjct: 579 ISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPN 638
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
I+Y +I G C G EA +++ M G P + +I F + K +A +F
Sbjct: 639 AISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFN 698
Query: 237 MMRVKRMDDLGL----STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
M D+G+ +T+ ++ID +CK GK+ +A +LE M +RG + +T ++++ G
Sbjct: 699 -----EMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKG 753
Query: 293 LLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE-- 346
L R+ EA ++ +++K PD+ Y L+KGL + + A ++ ++M+ +
Sbjct: 754 LCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYG 813
Query: 347 ----PTMHTYIMLLQGHLGKRGRK-------------GPDPLVNFDTIFVGGLVKAGKSL 389
P + +Y +++ G L K GR+ G P V T + G ++GK
Sbjct: 814 TNFKPDVISYSIIIDG-LCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLE 872
Query: 390 DAAKYVERVMNRGVEVPRFDYNKFLHYYSNE 420
DA ++++GV++ Y+ +H + E
Sbjct: 873 DAKHLFNEMVDQGVQLNAVTYSVMIHGFCKE 903
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/397 (21%), Positives = 171/397 (43%), Gaps = 71/397 (17%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND----------KTFKIALMTLAEVR 122
+S TFN +++ + + ++ + + RR + D T + + L +
Sbjct: 9 DSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILCKEG 68
Query: 123 ELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYG 181
++ + +M GC + + ++K LC + EA +L + + + +P+ I YG
Sbjct: 69 KVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYG 128
Query: 182 WLIKGYCDVGDLIEASKIWN-LMTDEG-----FEPSIDVVDKMIETFFKINKDDEAMKVF 235
L+KG C G++ A ++ ++ D G +P++ +I+ K ++DEA ++F
Sbjct: 129 TLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELF 188
Query: 236 QMMRVK------------------------------RMDDLGL----STYRIVIDWMCKR 261
+ M+ + M D+G+ +T ++ID CK
Sbjct: 189 KEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKE 248
Query: 262 GKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLY 317
GK+ +A +LE M RG D +T S++I GL + R+ EA ++ ++K PD Y
Sbjct: 249 GKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAY 308
Query: 318 HGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTI 377
L+KGL + + A + +EM+ + G K P V ++
Sbjct: 309 GTLMKGLCQTGKINIALHLHQEMLN----------------DTSQYGIKCIRPDVTTSSM 352
Query: 378 FVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
+ L K GK ++A + +E ++ RG + Y+ +
Sbjct: 353 LIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLI 389
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/364 (21%), Positives = 163/364 (44%), Gaps = 65/364 (17%)
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYC 188
+M GC + + ++K LC + EA +L + + + +P+ I YG L+KG C
Sbjct: 369 LLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLC 428
Query: 189 DVGDLIEASKIWN-LMTDEG-----FEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK- 241
G++ A ++ ++ D G +P++ +I+ K ++DEA ++F+ M+ +
Sbjct: 429 QTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQG 488
Query: 242 -----------------------------RMDDLGL----STYRIVIDWMCKRGKISQAY 268
M D+G+ +T ++ID +CK+GK+ +A
Sbjct: 489 IMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEAN 548
Query: 269 TMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGL 324
+LE + +RG D +T ++++ GL + R+ +A ++ +++K P++ L+KGL
Sbjct: 549 KLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGL 608
Query: 325 LRLRRAREATQVFREMIKR------GCEPTMHTYIMLLQGHLGKRGRK------------ 366
+ + A ++ + M+ C+P +Y +++ G L K GR+
Sbjct: 609 CQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDG-LCKCGREDEARELFKEMKA 667
Query: 367 -GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVM 425
G P V T + G ++GK DA +++ GV+ ++ + E V+
Sbjct: 668 LGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIE 727
Query: 426 FEEV 429
E+
Sbjct: 728 ANEL 731
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 170/410 (41%), Gaps = 75/410 (18%)
Query: 61 QYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALM-TLA 119
+Y K +P I+++ ++D + K R D E +EM + ++ D +L+
Sbjct: 156 RYGIKCKPTL----ISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFC 211
Query: 120 EVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEI 178
+ +K F+ M D G + + ++ C+ V+EA L+ + + + +
Sbjct: 212 HSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIV 271
Query: 179 AYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
Y LIKG C + EA++++ M G P +++ + K + A+ + Q M
Sbjct: 272 TYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEM 331
Query: 239 ---------RVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSI 289
+ R D ++T ++ID +CK GK+ +A +LE M +RG D +T S++
Sbjct: 332 LNDTSQYGIKCIRPD---VTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTL 388
Query: 290 IYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRL------------------ 327
I GL R+ EA + ++K PD Y L+KGL +
Sbjct: 389 IKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTG 448
Query: 328 -----------------------RRAREATQVFREMIKRGCEPTMHTYIMLLQGHL--GK 362
RR EA ++F EM +G P + +Y L+ G GK
Sbjct: 449 RYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGK 508
Query: 363 RGRK----------GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
+ G P V ++ + L K GK ++A K +E V+ RG
Sbjct: 509 WEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRG 558
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 110/229 (48%), Gaps = 18/229 (7%)
Query: 85 GKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLE 144
GK ++ + + ++G + V TF + + L + ++ + +M GC +
Sbjct: 688 GKWKDAKYLFNEMVDIGVQPDVT--TFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTV 745
Query: 145 MLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWN-L 202
+VK LC + EA L +K+ + P+ + YG L+KG C G++ A ++ +
Sbjct: 746 TYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKM 805
Query: 203 MTDEG-----FEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRI 253
++D G F+P + +I+ K ++DEA ++F K M LG+ +Y
Sbjct: 806 LSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELF-----KEMKALGVIPNVISYTS 860
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
+I C+ GK+ A + EM +G++ + +T S +I+G G++ +A
Sbjct: 861 LIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA 909
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 109/246 (44%), Gaps = 40/246 (16%)
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEAD--------NLTLSSIIYGLLAR-GRLR 300
T+ I+I+ +C ++++ + + +RG D ++T SS++ +L + G++
Sbjct: 12 TFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILCKEGKVI 71
Query: 301 EAYKVVEEIEKP----DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
EA +++E + + DI Y LIKGL R EAT +F M K GC P TY L+
Sbjct: 72 EANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLM 131
Query: 357 QG-------------------HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVER 397
+G G+ G K L+++ +I + GL K + +A + +
Sbjct: 132 KGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISY-SIIIDGLCKDRREDEARELFKE 190
Query: 398 VMNRGVEVPRFDYNKFLHYYSN----EEGVVMFEE---VGKKLREVGLADLADIFQRYGK 450
+ +G+ Y +H + + E+ +F E VG + L D+F + GK
Sbjct: 191 MKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGK 250
Query: 451 KMATRE 456
+ E
Sbjct: 251 VIEANE 256
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 149 VVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEG 207
++ LC+ EA+ L ++ + PN I+Y LI G+C G L +A ++N M D+G
Sbjct: 826 IIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQG 885
Query: 208 FEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
+ + MI F K + D+A+ FQ M
Sbjct: 886 VQLNAVTYSVMIHGFCKEGQIDKAL--FQKM 914
>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 128/270 (47%), Gaps = 18/270 (6%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
LS+ + P +G ++K C ++ A + MT G P+ V +I + N+
Sbjct: 210 LSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQV 269
Query: 229 DEAMKVFQMMRVKR-MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLS 287
EA+K+ + M V M D+ T+ VI +CK KI A +++ M RG DN+T
Sbjct: 270 SEALKLLEEMFVMGCMPDV--QTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYG 327
Query: 288 SIIYGLLARGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFRE-MIKRGCE 346
+++GL G+L EA K++ +I P+ ++ + LI G + + +EA E MI G +
Sbjct: 328 FLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQ 387
Query: 347 PTMHTYIMLLQGHLGKRG-------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAK 393
P + TY +L+ G L K G R+G +P V I V GL KAG +A
Sbjct: 388 PDIFTYNILMHG-LCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGL 446
Query: 394 YVERVMNRGVEVPRFDYNKFLHYYSNEEGV 423
+ + RG+ + YN + +E V
Sbjct: 447 VLHEMSARGLTINSVIYNCLICALCRKEKV 476
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 168/378 (44%), Gaps = 30/378 (7%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHIM 134
TF ++ + +D L++M + V N ++ + L++ ++ + + M
Sbjct: 220 TFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEM 279
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGDL 193
GC ++ N V+ LC+ + +A L+ + L P+ + YG+L+ G C +G L
Sbjct: 280 FVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKL 339
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
EA KI + P+ +++ +I + + EA + + TY I
Sbjct: 340 NEARKILIKIPC----PNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNI 395
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPD 313
++ +CK G +S A ++ EM +RG E + +T + ++ GL G L EA V+ E+
Sbjct: 396 LMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARG 455
Query: 314 IS----LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR---- 365
++ +Y+ LI L R + A + EM +GC+P + TY L+ G L K R
Sbjct: 456 LTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYG-LCKVDRIDEA 514
Query: 366 ----------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
V ++T+ + L++ G A V ++ RG + + YN +
Sbjct: 515 FRLFHNMLLDGAVANNVTYNTL-IHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIK 573
Query: 416 YYSN----EEGVVMFEEV 429
+ E+G+ ++E++
Sbjct: 574 AFCKVGNIEKGLELYEQM 591
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 141/297 (47%), Gaps = 23/297 (7%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N ++ LC+ + A+ L+ ++S +PN I Y L+ G C G L EA + + M+
Sbjct: 394 NILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSA 453
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKIS 265
G + + + +I + K A+ + M K L TY +I +CK +I
Sbjct: 454 RGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKP-DLFTYNSLIYGLCKVDRID 512
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISL----YHGLI 321
+A+ + M G A+N+T +++I+ LL RG ++A +V ++ +L Y+GLI
Sbjct: 513 EAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLI 572
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR-------------KGP 368
K ++ + +++ +MI G + +++ G L K G+ +G
Sbjct: 573 KAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMING-LCKVGKVDNAFEFLRDAINRGF 631
Query: 369 DP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVV 424
P +V ++++ + GL K G+ +A +R+ GV F YN F+ + +EG+V
Sbjct: 632 VPDIVTYNSV-LNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQC-KEGMV 686
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 130/292 (44%), Gaps = 11/292 (3%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
N IT+ +V+ + K+ ++ L EM R L +N + + L ++ +N
Sbjct: 424 NVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLL 483
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDV 190
M GC+ L N ++ LC+ + EA L L + N + Y LI
Sbjct: 484 SEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRR 543
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G +A + N M G + +I+ F K+ ++ +++++ M MD LG T
Sbjct: 544 GAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMI---MDGLGADT 600
Query: 251 Y--RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
I+I+ +CK GK+ A+ L + RG D +T +S++ GL GR++EA + +
Sbjct: 601 ISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDR 660
Query: 309 IE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
++ +PD Y+ I + +A F I+ G P+ T+ +L+
Sbjct: 661 LQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLV 712
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 100/238 (42%), Gaps = 7/238 (2%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHIM 134
T+N ++ + K ID + M V N+ T+ + L +K + + M
Sbjct: 497 TYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDM 556
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDL 193
GC N ++K C+ + + L ++ + + + I+ +I G C VG +
Sbjct: 557 LFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKV 616
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK--RMDDLGLSTY 251
A + + GF P I + ++ K+ + EA+ +F ++V+ R D TY
Sbjct: 617 DNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAF---TY 673
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
I W CK G ++ A + G NLT + ++Y LL + + V++E+
Sbjct: 674 NTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 72/185 (38%), Gaps = 19/185 (10%)
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEM-----FKRGIEADNLTLSSIIYGLLARGRLREAY 303
S + I++ K G+ QA +L +M + ++ +L L ++ G + Y
Sbjct: 148 SIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFY 207
Query: 304 KVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
++ + P + + ++K L A + R+M K GC P Y L+ L ++
Sbjct: 208 DMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHA-LSQK 266
Query: 364 GR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY 410
+ G P V + GL K K DA K V+R++ RG Y
Sbjct: 267 NQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTY 326
Query: 411 NKFLH 415
LH
Sbjct: 327 GFLLH 331
>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
Length = 768
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 152/351 (43%), Gaps = 30/351 (8%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
N +T+ ++D + K++ +D Q M + + N+ T+ + + K++V
Sbjct: 201 NVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQML 260
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
M+ G + + ++ LC+ EA+ + L + IKP+ YG L+ GY
Sbjct: 261 QEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATE 320
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G L E +LM G P + + M + K DEAM +F MR + + G+
Sbjct: 321 GALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSP-GVVN 379
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y +ID +CK G++ A +M G+ D SS++YGL + +A K+ E+
Sbjct: 380 YGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVL 439
Query: 311 KPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK 366
I L ++ L+ L R R EA ++ M++ P + +Y L+ GH
Sbjct: 440 DQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGH------- 492
Query: 367 GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
G+ +AAK ++ +++ G++ F YN LH Y
Sbjct: 493 ----------------CLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGY 527
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 145/321 (45%), Gaps = 60/321 (18%)
Query: 58 LFFQYTQKAQPCFAHNSITFNRMVDIIGKSRN-------IDLFWETLQEMGRRRLVNDKT 110
LF + A+P TFNR++ ++ ++R + LF ++E + + T
Sbjct: 38 LFDEMLTYARPASVR---TFNRLLTVVSRARCSSASELVVSLFNRMIRECSVKVAPSSCT 94
Query: 111 FKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLE---MLNKVVKTLCQRKLVVEAKYLIL 167
+ I + + LK F ++ G +SL + +++K LC K V EA ++L
Sbjct: 95 YTILIGCFCRMGRLKHGFAAFGLILKTG--WSLNNTVIFGQLLKGLCDAKRVDEATDILL 152
Query: 168 K-LSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEG---FEPSIDVVDKMIETF 222
+ + E+ N I+Y L+KG C+ EA ++ ++M D+G P++
Sbjct: 153 RRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNV---------- 202
Query: 223 FKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEAD 282
TY VID +CK + +A + + M +G+ +
Sbjct: 203 --------------------------VTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPN 236
Query: 283 NLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFR 338
N T + +I+G L+ G+ +E ++++E+ +PD +Y L+ L + R EA +F
Sbjct: 237 NHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFD 296
Query: 339 EMIKRGCEPTMHTYIMLLQGH 359
+I++G +P + Y +LL G+
Sbjct: 297 SLIRKGIKPHVTIYGILLHGY 317
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 113/228 (49%), Gaps = 7/228 (3%)
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYC 188
FF ++ D G + N ++ LC+ V+EA+ LI L L ++P+ I+Y L+ G+C
Sbjct: 435 FFEVL-DQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHC 493
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
G + EA+K+ ++M G +P + ++ + K + D+A +F+ M +K + G+
Sbjct: 494 LTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTP-GV 552
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY ++ + + G+ +A + M + D T + I+ GL + EA+K+ +
Sbjct: 553 VTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQS 612
Query: 309 IEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
+ D+ L + +I LL+ R +A +F + G P + TY
Sbjct: 613 LCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETY 660
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 127/299 (42%), Gaps = 23/299 (7%)
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE----WIKPNEIAYGWLIKGYCD 189
M + GC ++ N ++K LC K EA L+ +++ PN + Y +I G C
Sbjct: 155 MPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVIDGLCK 214
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
+ A ++ M D+G P+ +I + K E +++ Q M +
Sbjct: 215 AQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQP-DCV 273
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
Y +++D++CK G+ ++A + + + ++GI+ +++G G L E + ++ +
Sbjct: 274 IYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLM 333
Query: 310 EK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
+ PD +++ + + EA +F +M ++ P + Y L+ L K GR
Sbjct: 334 VRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDA-LCKLGR 392
Query: 366 -------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
+G P + + V GL K A K V+++G+ + +N
Sbjct: 393 VDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFN 451
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/273 (19%), Positives = 105/273 (38%), Gaps = 49/273 (17%)
Query: 165 LILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVV-DKMIETFF 223
+I + S + P+ Y LI +C +G L + L+ G+ + V+ ++++
Sbjct: 80 MIRECSVKVAPSSCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLC 139
Query: 224 KINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGI 279
+ DEA + ++RM + G + +Y I++ +C + +A ++ M G
Sbjct: 140 DAKRVDEATDIL----LRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDG- 194
Query: 280 EADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFRE 339
+ P++ Y +I GL + + A VF+
Sbjct: 195 ---------------------------DGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQH 227
Query: 340 MIKRGCEPTMHTYIMLLQGHLG------------KRGRKGPDPLVNFDTIFVGGLVKAGK 387
MI +G P HTY L+ G+L + G P + + L K G+
Sbjct: 228 MIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGR 287
Query: 388 SLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE 420
+A + ++ +G++ Y LH Y+ E
Sbjct: 288 CTEARNIFDSLIRKGIKPHVTIYGILLHGYATE 320
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 115/268 (42%), Gaps = 3/268 (1%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
I++N +VD + ID + L M L D+ T+ L + R + + F
Sbjct: 483 ISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFRE 542
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEI-AYGWLIKGYCDVGD 192
M G + N ++ L Q EAK L L + + +I Y ++ G C
Sbjct: 543 MLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNF 602
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ EA K++ + + + I ++ MI K + ++AM +F + + + TYR
Sbjct: 603 VDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVP-DVETYR 661
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP 312
++ + + K G + + + M + G ++ L++++ LL RG + A + ++++
Sbjct: 662 LIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDEK 721
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREM 340
+ SL L+ + E Q+ + +
Sbjct: 722 NFSLEASTTSMLISIYSRAEYQQLAKSL 749
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 176/380 (46%), Gaps = 41/380 (10%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVNFFHIM 134
T + ++D++ K + + L+ + +R + D L+ L + K F M
Sbjct: 374 TSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKM 433
Query: 135 NDCGCEYSLEMLNKVVKTLCQR---KLVVEA-KYLILKLSEW---IKPNEIAYGWLIKGY 187
GC ++ ++K LCQ K+ +E K ++ S + KPN I+Y +I G
Sbjct: 434 QKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGL 493
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C G EA +++ M G P + +I F + K +A +F M D+G
Sbjct: 494 CKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFN-----EMVDIG 548
Query: 248 L----STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
+ +T+ ++ID +CK GK+ +A +LE M +RG + +T ++++ GL R+ EA
Sbjct: 549 VQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEAT 608
Query: 304 KVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE------PTMHTYI 353
++ +++K PD+ Y L+KGL + + A ++ ++M+ + P + +Y
Sbjct: 609 QLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYS 668
Query: 354 MLLQGHLGKRGRK-------------GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMN 400
+++ G L K GR+ G P V T + G ++GK DA +++
Sbjct: 669 IIIDG-LCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVD 727
Query: 401 RGVEVPRFDYNKFLHYYSNE 420
+GV++ Y+ +H + E
Sbjct: 728 QGVQLNAVTYSVMIHGFCKE 747
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 154/371 (41%), Gaps = 98/371 (26%)
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYC 188
+M GC + + ++K LC + + EA L + + + +P+ IAYG L+KG C
Sbjct: 32 LLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLC 91
Query: 189 DVGDLIEASKIWNLMTDEGFE------PSIDVVDKMIETFFKINKDDEAMKVFQMMRVK- 241
G + A + M ++ + P++ +I+ K ++DEA ++F+ M+ +
Sbjct: 92 QTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQG 151
Query: 242 -----------------------------RMDDLGL----STYRIVIDWMCKRGKISQAY 268
M D+G+ +T ++ID +CK GK+ +A
Sbjct: 152 MMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEAN 211
Query: 269 TMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGL 324
+LE M +RG D +T S++I GL + R+ EA ++ ++K PD Y L+KGL
Sbjct: 212 ELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGL 271
Query: 325 LRL-----------------------------------------RRAREATQVFREMIKR 343
+ RR EA ++F+EM +
Sbjct: 272 CQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQ 331
Query: 344 GCEPTMHTYIMLLQGHL--GKRGRK----------GPDPLVNFDTIFVGGLVKAGKSLDA 391
G P + +Y L+ G GK + G P V ++ + L K GK ++A
Sbjct: 332 GIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEA 391
Query: 392 AKYVERVMNRG 402
K +E V+ RG
Sbjct: 392 NKLLEVVIQRG 402
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 164/364 (45%), Gaps = 65/364 (17%)
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYC 188
+M GC + + ++K LC + + EA L + + + +P+ IAYG L+KG C
Sbjct: 213 LLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLC 272
Query: 189 DVGDLIEASKIWN-LMTDEG-----FEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK- 241
G++ A ++ ++ D G +P++ +I+ K ++DEA ++F+ M+ +
Sbjct: 273 QTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQG 332
Query: 242 -----------------------------RMDDLGL----STYRIVIDWMCKRGKISQAY 268
M D+G+ +T ++ID +CK+GK+ +A
Sbjct: 333 IMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEAN 392
Query: 269 TMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGL 324
+LE + +RG D +T ++++ GL + R+ +A ++ +++K P++ L+KGL
Sbjct: 393 KLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGL 452
Query: 325 LRLRRAREATQVFREMIKR------GCEPTMHTYIMLLQGHLGKRGRK------------ 366
+ + A ++ + M+ C+P +Y +++ G L K GR+
Sbjct: 453 CQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDG-LCKCGREDEARELFKEMKA 511
Query: 367 -GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVM 425
G P V T + G ++GK DA +++ GV+ ++ + E V+
Sbjct: 512 LGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIE 571
Query: 426 FEEV 429
E+
Sbjct: 572 ANEL 575
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 110/229 (48%), Gaps = 18/229 (7%)
Query: 85 GKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLE 144
GK ++ + + ++G + V TF + + L + ++ + +M GC +
Sbjct: 532 GKWKDAKYLFNEMVDIGVQPDVT--TFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTV 589
Query: 145 MLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWN-L 202
+VK LC + EA L +K+ + P+ + YG L+KG C G++ A ++ +
Sbjct: 590 TYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKM 649
Query: 203 MTDEG-----FEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRI 253
++D G F+P + +I+ K ++DEA ++F K M LG+ +Y
Sbjct: 650 LSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELF-----KEMKALGVIPNVISYTS 704
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
+I C+ GK+ A + EM +G++ + +T S +I+G G++ +A
Sbjct: 705 LIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA 753
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 109/264 (41%), Gaps = 58/264 (21%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
I+P+ G LI +C G +IEA+++ +M G +D+V
Sbjct: 6 IQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGC--ILDIV----------------- 46
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
TY +I +C + +IS+A + M K G D + +++ G
Sbjct: 47 -----------------TYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKG 89
Query: 293 LLARGRLREAYKVVEEI----------EKPDISLYHGLIKGLLRLRRAREATQVFREMIK 342
L G++ A + +E+ KP + Y +I GL + RR EA ++F+EM
Sbjct: 90 LCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKA 149
Query: 343 RGCEPTMHTYIMLLQGHL--GKRGRK----------GPDPLVNFDTIFVGGLVKAGKSLD 390
+G P + +Y L+ G GK + G V ++ + L K GK ++
Sbjct: 150 QGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIE 209
Query: 391 AAKYVERVMNRGVEVPRFDYNKFL 414
A + +E ++ RG + Y+ +
Sbjct: 210 ANELLEVMIQRGCILDIVTYSTLI 233
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 149 VVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEG 207
++ LC+ EA+ L ++ + PN I+Y LI G+C G L +A ++N M D+G
Sbjct: 670 IIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQG 729
Query: 208 FEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
+ + MI F K + D+A+ FQ M
Sbjct: 730 VQLNAVTYSVMIHGFCKEGQIDKAL--FQKM 758
>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 110/438 (25%), Positives = 187/438 (42%), Gaps = 50/438 (11%)
Query: 36 NLTHEFFLQICNNFPLSWRPVYLFFQYT-QKAQPCFAHNSITFNRMVDIIGKSRNIDLFW 94
+ H FF N + + LF + T Q +P + +T+N ++D + K+R +D
Sbjct: 270 TVIHGFF-----NEGETGKACSLFHEMTRQGVKP----DVVTYNLIIDALCKARAMDKAE 320
Query: 95 ETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTL 153
L++M D T+ + A + LK+ F M G ++ N + +L
Sbjct: 321 LVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASL 380
Query: 154 CQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSI 212
C+ EA ++ ++ KP+ +Y L+ GY G + ++N M G +
Sbjct: 381 CKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANC 440
Query: 213 DVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLE 272
V +I + K D+AM +F M+ + + + TY VI + G+++ A
Sbjct: 441 HVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSP-DVVTYSTVISTFSRMGRLTDAMEKFN 499
Query: 273 EMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE-----IEKPDISLYHGLIKGLLRL 327
+M RGI+ + SSII G G L +A ++V E I +PDI + +I L +
Sbjct: 500 QMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKD 559
Query: 328 RRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGK 387
R +A +F G P + T+ L+ G+ VG + KA K
Sbjct: 560 GRVMDAHDIFDLATDIGERPGVITFNSLIDGY-----------------CLVGKMDKAFK 602
Query: 388 SLDAAKYVERVMNRGVEVPRFDYNKFLH-YYSN---EEGVVMFEEVGKKLREVGLAD--- 440
LDA + V GVE YN L Y+ N +G+ +F E+ +K +
Sbjct: 603 ILDAMEVV------GVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGI 656
Query: 441 -LADIFQRYGKKMATRER 457
LA +F R G+ +A R++
Sbjct: 657 MLAGLF-RAGRTVAARKK 673
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 138/306 (45%), Gaps = 49/306 (16%)
Query: 63 TQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEV 121
TQ A P F T+N ++D ++R DL + R L D+ T L L
Sbjct: 150 TQVAVPTFC----TYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYA 205
Query: 122 RELKKMVN-FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW---IKPNE 177
++ VN H M++ GC + + V+K LC + A L+ +++ P+
Sbjct: 206 NRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDV 265
Query: 178 IAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQM 237
+AY +I G+ + G+ +A +++ MT +G +P DVV
Sbjct: 266 VAYSTVIHGFFNEGETGKACSLFHEMTRQGVKP--DVV---------------------- 301
Query: 238 MRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
TY ++ID +CK + +A +L +M G + D +T S +I+G G
Sbjct: 302 ------------TYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLG 349
Query: 298 RLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYI 353
RL+EA K+ E++K P+I + + L + R++EA + F M +G +P + +Y
Sbjct: 350 RLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYC 409
Query: 354 MLLQGH 359
LL G+
Sbjct: 410 TLLHGY 415
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 125/256 (48%), Gaps = 20/256 (7%)
Query: 146 LNKVVKTLCQRKLVVEAKYLILKLSEWI--KPNEIAYGWLIKGYCDVGDLIEASKIWNLM 203
+ V+ +LC+ V++A + I L+ I +P I + LI GYC VG + +A KI + M
Sbjct: 549 FSSVINSLCKDGRVMDA-HDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAM 607
Query: 204 TDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGK 263
G EP I + +++ +FK + ++ + +F+ M+ K + TY I++ + + G+
Sbjct: 608 EVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKP-NTVTYGIMLAGLFRAGR 666
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR-----EAYKVVEEIE----KPDI 314
A EM + G T++ IYG++ G R EA + +++ K I
Sbjct: 667 TVAARKKFHEMIESGT-----TVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSI 721
Query: 315 SLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNF 374
++ + +I + +++R EA ++F + G P TY +++ L G + + + F
Sbjct: 722 TILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNM--F 779
Query: 375 DTIFVGGLVKAGKSLD 390
++ G+V + L+
Sbjct: 780 SSMEKSGIVPGSRLLN 795
>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 576
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 115/226 (50%), Gaps = 6/226 (2%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEA 196
GC S+ N ++ LCQ+ L+ +A L + PN ++ LI+G+C+ + A
Sbjct: 316 GCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRA 375
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVID 256
+ +M G P I + ++ K K D+A+ + + K L +Y VID
Sbjct: 376 IEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSP-SLISYNTVID 434
Query: 257 WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KP 312
+ K GK A +LEEM +G++ D +T +S++ GL G++REA K ++ +P
Sbjct: 435 GLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRP 494
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+ +Y+ +I GL + ++ A +M+ +GC+PT TY L++G
Sbjct: 495 NAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKG 540
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 160/357 (44%), Gaps = 22/357 (6%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMN 135
++N ++ KS I+ L MG N T+ L +L + +LK+ +
Sbjct: 151 SYNVLISGYCKSGEIEEALRVLDRMGVSP--NAATYDAVLCSLCDRGKLKQAMQVLGRQL 208
Query: 136 DCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLI 194
C + ++ C+ V +A L ++ ++ KP+ + Y LIKG+C G L
Sbjct: 209 QSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLD 268
Query: 195 EASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIV 254
EA + + G +P + + ++ + + +AMK+ M +++ + T+ I+
Sbjct: 269 EAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATM-LRKGCLPSVVTFNIL 327
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK--- 311
I+++C++G + +A +LE M K G ++ + + +I G + A + +E +
Sbjct: 328 INFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGC 387
Query: 312 -PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR----- 365
PDI Y+ L+ L + + +A + ++ +GC P++ +Y ++ G L K G+
Sbjct: 388 YPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLL-KVGKAELAV 446
Query: 366 --------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
KG P + T VGGL + GK +A K+ + + F YN +
Sbjct: 447 ELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSII 503
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 158/346 (45%), Gaps = 38/346 (10%)
Query: 119 AEVRELKKMVN---------FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
+E+R L++++ F M + G + +++ C+ A ++ L
Sbjct: 81 SEIRHLRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGIL 140
Query: 170 SEWIKPNEI-AYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
E ++ +Y LI GYC G++ EA ++ + M G P+ D ++ + K
Sbjct: 141 EESGAVIDVTSYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKL 197
Query: 229 DEAMKVF-QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLS 287
+AM+V + ++ K D+ T ++ID CK + QA + EM +G + D +T +
Sbjct: 198 KQAMQVLGRQLQSKCYPDV--VTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYN 255
Query: 288 SIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
+I G GRL EA + ++++ +PD+ ++ +++ L R +A ++ M+++
Sbjct: 256 VLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRK 315
Query: 344 GCEPTMHTYIMLL-----QGHLGKR-------GRKGPDPLVNFDTIFVGGLVKAGKSLD- 390
GC P++ T+ +L+ +G LGK + G P + G GK +D
Sbjct: 316 GCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCN-GKGIDR 374
Query: 391 AAKYVERVMNRGVEVPRFDYNKFLHYYSN----EEGVVMFEEVGKK 432
A +Y+E +++RG YN L ++ VV+ ++ K
Sbjct: 375 AIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSK 420
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 2/136 (1%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
I++N ++D + K +L E L+EM + L D T + L+ ++++ + FFH
Sbjct: 427 ISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHY 486
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDVGD 192
+ + + N ++ LC+ + A +L +++ KP E Y LIKG G
Sbjct: 487 LKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGL 546
Query: 193 LIEASKIWNLMTDEGF 208
+ASK+ N + G
Sbjct: 547 AEDASKLSNELYSRGL 562
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 163/375 (43%), Gaps = 27/375 (7%)
Query: 57 YLFFQYTQKAQPCFAHNSI--------TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND 108
Y +KAQ F S+ ++N M++ K + +D +EM R
Sbjct: 248 YFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPI 307
Query: 109 KTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK 168
F L + A+++ V+ H + G + L LN ++ C + ++ K
Sbjct: 308 IQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAK 367
Query: 169 -LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINK 227
L P+ + LIKG C G + +A + + +GF+ + +I KI
Sbjct: 368 ILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGD 427
Query: 228 DDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLS 287
A+K+ + + R+ + Y +ID +CK +S+AY + EM +GI AD +T S
Sbjct: 428 TRGAIKLLRKID-GRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYS 486
Query: 288 SIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
++IYG G+L+EA ++ E+ PD+ Y L+ L + + +EA V M+K
Sbjct: 487 TLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKA 546
Query: 344 GCEPTMHTYIMLLQGHL------------GKRGRKGPDPLVNFDTIFVGGLVKAGKSLDA 391
+P + TY L+ G+L G P V+ TI + G K+ K +D
Sbjct: 547 CVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKS-KMVDE 605
Query: 392 AKYVERVMNRGVEVP 406
A + + M++ VP
Sbjct: 606 ALNLFKEMHQKNMVP 620
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 168/353 (47%), Gaps = 35/353 (9%)
Query: 77 FNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIMN 135
++ ++D + K + + + EM + + D T+ + V +LK+ + +
Sbjct: 450 YSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLN--- 506
Query: 136 DCGCEYSLEMLNKVVKT-------LCQRKLVVEAK-YLILKLSEWIKPNEIAYGWLIKGY 187
E L+ +N V+T L + V EAK L + L +KP+ Y L+ GY
Sbjct: 507 ----EMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGY 562
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
V ++ +A ++N M+ G P + +I F K DEA+ +F+ M K M
Sbjct: 563 LLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVP-D 621
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
TY ++D +CK G+IS + +++EM RG AD +T +S+I GL G L +A +
Sbjct: 622 TVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFN 681
Query: 308 EIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH---- 359
+++ +P+ + L+ GL + R ++A +VF++++ +G ++ Y +++ GH
Sbjct: 682 KMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQG 741
Query: 360 --------LGKRGRKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
L K G P V FD I + L K ++ A K + +++ RG+
Sbjct: 742 LLEEALTMLSKMEENGCIPNAVTFD-IIINALFKKDENDKAEKLLRQMIARGL 793
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 99/432 (22%), Positives = 174/432 (40%), Gaps = 96/432 (22%)
Query: 77 FNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIM- 134
+N ++D + K + + + EM + + N T+ + V +LK+ + ++M
Sbjct: 136 YNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMV 195
Query: 135 ----NDCGCEYSLEMLNKVVKTLCQRKLVVEAK-YLILKLSEWIKPNEIAYGWLIKGYCD 189
N C Y N +V LC+ V EAK L + L +K N I Y L+ GY
Sbjct: 196 LKTINPNVCTY-----NILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFL 250
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR------- 242
V ++ +A ++N M+ G P + + MI F KI + D+A+ +F+ M + R
Sbjct: 251 VYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQF 310
Query: 243 ---MDDLG-----------------------LSTYRIVIDWMCKRGKISQAYTMLEEMFK 276
+D L T I+I+ C G+I+ +++L ++ K
Sbjct: 311 NKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILK 370
Query: 277 RGIEADNLTLSSIIYGLLARGRLREAY--------------------------------- 303
RG +TL+++I GL +G++++A
Sbjct: 371 RGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRG 430
Query: 304 ------KVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
K+ + KP++ +Y +I L + + EA +F EM +G + TY L+
Sbjct: 431 AIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIY 490
Query: 358 GH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEV 405
G L + K +P V TI V L K GK +A + ++ V+
Sbjct: 491 GFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKP 550
Query: 406 PRFDYNKFLHYY 417
F YN ++ Y
Sbjct: 551 DVFTYNTLMNGY 562
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 144/331 (43%), Gaps = 66/331 (19%)
Query: 142 SLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLIEASKIW 200
++EM + ++ LC+ +LV EA L +++ + I + + Y LI G+C VG L EA +
Sbjct: 446 NVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLL 505
Query: 201 NLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM---------------------- 238
N M + P + +++ K K EA V +M
Sbjct: 506 NEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLV 565
Query: 239 -RVKR-------MDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTL 286
VK+ M +G++ TY I+I+ CK + +A + +EM ++ + D +T
Sbjct: 566 YEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTY 625
Query: 287 SSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIK 342
SS++ GL GR+ + +++E+ + D+ Y+ LI GL + +A +F +M
Sbjct: 626 SSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKD 685
Query: 343 RGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
+G P T+ TI + GL K G+ DA + + ++ +G
Sbjct: 686 QGIRPNTFTF-----------------------TILLDGLCKGGRLKDAQEVFQDLLTKG 722
Query: 403 VEVPRFDYNKFLHYYSN----EEGVVMFEEV 429
+ + YN ++ + EE + M ++
Sbjct: 723 YHLDVYIYNVMIYGHCKQGLLEEALTMLSKM 753
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 106/218 (48%), Gaps = 6/218 (2%)
Query: 146 LNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
LN ++K LC + V EA + KL ++ + N+++Y LI G C +GD A K +
Sbjct: 66 LNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKFLRKID 125
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
+P++++ + +I+ K EA +F M VK + + TY +I C GK+
Sbjct: 126 GRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISA-NVVTYSTLIYGFCIVGKL 184
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV----VEEIEKPDISLYHGL 320
+A +L M + I + T + ++ L G+++EA V ++ K ++ Y L
Sbjct: 185 KEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTL 244
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+ G + ++A VF M G P +H+Y +++ G
Sbjct: 245 MDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMING 282
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 129/280 (46%), Gaps = 46/280 (16%)
Query: 70 FAHNSITFNRMVD---IIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKK 126
+ +++T N ++ + G+ + F + L G + +N ++ + + + + +
Sbjct: 59 YPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQ--LNQVSYATLINGVCRIGDTRA 116
Query: 127 MVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIK 185
+ F ++ + ++EM N ++ LC+ +LV EA L +++ + I N + Y LI
Sbjct: 117 AIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIY 176
Query: 186 GYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD 245
G+C VG L EA + N+M + P++
Sbjct: 177 GFCIVGKLKEALGLLNVMVLKTINPNV--------------------------------- 203
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
TY I++D +CK GK+ +A ++L M K ++++ +T S+++ G +++A V
Sbjct: 204 ---CTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHV 260
Query: 306 VEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMI 341
+ PD+ Y+ +I G +++R +A +F+EMI
Sbjct: 261 FNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMI 300
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 115/260 (44%), Gaps = 18/260 (6%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+ + LIKG C G + EA + + +GF+ + +I +I A+K
Sbjct: 61 PDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKF 120
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
+ + R+ + Y +ID +CK +S+AY + EM +GI A+ +T S++IYG
Sbjct: 121 LRKID-GRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFC 179
Query: 295 ARGRLREAYKV----VEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
G+L+EA + V + P++ Y+ L+ L + + +EA V M+K + +
Sbjct: 180 IVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVI 239
Query: 351 TYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERV 398
TY L+ G+ G P V+ I + G K K +D A + +
Sbjct: 240 TYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKI-KRVDKALNLFKE 298
Query: 399 MNRGVEVPRFDYNKFLHYYS 418
M P +NK L ++
Sbjct: 299 MILSRFPPIIQFNKILDSFA 318
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 80/168 (47%), Gaps = 2/168 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
+++T++ +VD + KS I W+ + EM R D T+ + L + L K + F
Sbjct: 621 DTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALF 680
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDV 190
+ M D G + ++ LC+ + +A+ + L++ + Y +I G+C
Sbjct: 681 NKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQ 740
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
G L EA + + M + G P+ D +I FK +++D+A K+ + M
Sbjct: 741 GLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQM 788
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 79/202 (39%), Gaps = 51/202 (25%)
Query: 267 AYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY----------------------- 303
+ ++L ++ KRG D +TL+++I GL +G+++EA
Sbjct: 47 SLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLIN 106
Query: 304 ----------------KVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
K+ + KP++ +Y+ +I L + + EA +F EM +G
Sbjct: 107 GVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISA 166
Query: 348 TMHTYIMLLQGH--LGKRGR----------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYV 395
+ TY L+ G +GK K +P V I V L K GK +A +
Sbjct: 167 NVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVL 226
Query: 396 ERVMNRGVEVPRFDYNKFLHYY 417
++ V+ Y+ + Y
Sbjct: 227 AVMLKACVKSNVITYSTLMDGY 248
>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 138/310 (44%), Gaps = 18/310 (5%)
Query: 145 MLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
+ K++K + + +A ++ L + KP+ AY +I G+C + A + + M
Sbjct: 12 LCTKLIKGFFNSRNIDKATRVMGILEKHGKPDVFAYNAVISGFCKANRIESAKTVLDRMK 71
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
+GF P + + MI TF K D A+KVF+ + L TY I+I+ G I
Sbjct: 72 RKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGI 131
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGL 320
+A +L+EM RG+E D T + I GL G++ A++ V + KPD+ Y+ L
Sbjct: 132 DEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNIL 191
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR-------------KG 367
++ LL + E + E+ RGCEP + TY +L+ L + G+ KG
Sbjct: 192 LRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILIS-SLCRDGKIEESVNLVKVMKEKG 250
Query: 368 PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFE 427
P + + GK A ++++ ++ G +YN +
Sbjct: 251 LTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAV 310
Query: 428 EVGKKLREVG 437
E+ KL EVG
Sbjct: 311 EIFGKLDEVG 320
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 143/296 (48%), Gaps = 15/296 (5%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
++ T+N + + K +D +E ++ + R D T+ I L L + + +
Sbjct: 149 DTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWM 208
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
+ GCE ++ + ++ +LC+ + E+ L+ + E + P+ Y LI +C
Sbjct: 209 SEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCRE 268
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG--- 247
G L A + + M +GF P I + ++ K D A+++F ++D++G
Sbjct: 269 GKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFG-----KLDEVGCPP 323
Query: 248 -LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
+S+Y ++ + G +A M+ +M +GI+ D +T +S+I L G + EA ++
Sbjct: 324 NVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLL 383
Query: 307 EEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
++ +P+I Y ++ GL + R +A +V MI+ GC+P TY +L++G
Sbjct: 384 ADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEG 439
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 123/280 (43%), Gaps = 22/280 (7%)
Query: 203 MTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRG 262
M + ++P + + K+I+ FF D+A +V ++ D + Y VI CK
Sbjct: 1 MVAKDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHGKPD--VFAYNAVISGFCKAN 58
Query: 263 KISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-----KPDISLY 317
+I A T+L+ M ++G D +T + +I +G++ A KV EE+ KP + Y
Sbjct: 59 RIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITY 118
Query: 318 HGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR------------ 365
LI+ + EA ++ EM+ RG EP TY ++ +G L K G+
Sbjct: 119 TILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRG-LCKEGKVDRAFEFVRTLN 177
Query: 366 -KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVV 424
+G P V I + L+ GK + K++ + +RG E Y+ + + +
Sbjct: 178 SRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIE 237
Query: 425 MFEEVGKKLREVGLADLADIFQRYGKKMATRERRRNRAIE 464
+ K ++E GL A + RE + + AIE
Sbjct: 238 ESVNLVKVMKEKGLTPDAYCYDPLIAAFC-REGKLDMAIE 276
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 142/292 (48%), Gaps = 7/292 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFF 131
N +T++ +++ + K+ + M +R L D T++ L A L +M
Sbjct: 305 NVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALL 364
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
+M G + + N ++ +++ V +A + K+ + + PN + YG +I C
Sbjct: 365 DLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKS 424
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G + +A + M DEG P+I V +I +K D+A ++ M + R L
Sbjct: 425 GSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEM-LDRGICLNTIF 483
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
+ +ID CK G++ ++ + + M + G++ D +T +++I G G++ EA K++ +
Sbjct: 484 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMV 543
Query: 311 ----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
KPDI Y LI G R+ R +A +F+EM+ G P + TY ++LQG
Sbjct: 544 SVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQG 595
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 143/299 (47%), Gaps = 33/299 (11%)
Query: 149 VVKTLCQRKLVVEAKYLILK-LSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDE 206
++K LC K +A ++L+ ++E P+ +Y L+KG CD EA ++ ++M D+
Sbjct: 133 LLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADD 192
Query: 207 ---GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGK 263
G P + + ++ FFK D+A + M + R + TY +I +CK
Sbjct: 193 RGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEM-LDRGILPDVVTYSSIIAALCKAQA 251
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHG 319
+ +A +L M K G+ D +T +SI++G + G+ +EA ++++ +P++ Y
Sbjct: 252 MDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSS 311
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFV 379
L+ L + R+ EA ++F M KRG EP + TY LLQG+ K
Sbjct: 312 LMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATK----------------- 354
Query: 380 GGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
G LV+ LD ++ G++ +N + Y+ +E V V K+R+ GL
Sbjct: 355 GALVEMHALLDL------MVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGL 407
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/412 (22%), Positives = 170/412 (41%), Gaps = 58/412 (14%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHI 133
+T++ ++ + K++ +D E L M + ++ D T+ L + K+ +
Sbjct: 237 VTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKK 296
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M G E ++ + ++ LC+ EA+ + +++ ++P+ Y L++GY G
Sbjct: 297 MRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGA 356
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
L+E + +LM G +P V + +I + K K D+AM VF MR ++ + Y
Sbjct: 357 LVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNP-NVVCYG 415
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA----------------- 295
VID +CK G + A E+M G+ + + +S+I+GL
Sbjct: 416 TVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDR 475
Query: 296 ------------------RGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREA 333
GR+ E+ K+ + + KPDI Y+ LI G + EA
Sbjct: 476 GICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEA 535
Query: 334 TQVFREMIKRGCEPTMHTYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGG 381
T++ M+ G +P + TY L+ G+ + G P + I + G
Sbjct: 536 TKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQG 595
Query: 382 LVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYS----NEEGVVMFEEV 429
L ++ A + + G ++ YN LH +E + MF+ +
Sbjct: 596 LFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 647
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 162/386 (41%), Gaps = 26/386 (6%)
Query: 55 PVYLFFQYTQKAQPCFAHNSITFNRMVDIIG---KSRNIDLFWETLQEMGRRRL-VNDKT 110
P +Y + A+ + T + +IG ++ +DL + L + ++ V+ T
Sbjct: 70 PAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAIT 129
Query: 111 FKIALMTL-AEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
F L L A+ R M M + GC + N ++K LC EA L+ +
Sbjct: 130 FTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMM 189
Query: 170 SE----WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI 225
++ P+ ++Y ++ G+ GD +A ++ M D G P + +I K
Sbjct: 190 ADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKA 249
Query: 226 NKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
D+AM+V M VK TY ++ C G+ +A L++M G+E + +T
Sbjct: 250 QAMDKAMEVLNTM-VKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVT 308
Query: 286 LSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMI 341
SS++ L GR EA K+ + + K PDI+ Y L++G E + M+
Sbjct: 309 YSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMV 368
Query: 342 KRGCEPTMHTYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSL 389
+ G +P H + +L+ + K + G +P V + L K+G
Sbjct: 369 RNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVD 428
Query: 390 DAAKYVERVMNRGVEVPRFDYNKFLH 415
DA Y E++++ G+ Y +H
Sbjct: 429 DAMLYFEQMIDEGLTPNIIVYTSLIH 454
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 138/304 (45%), Gaps = 11/304 (3%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNID---LFWETLQEMGRRRLVNDKTFKIALMTL 118
+++ Q N + + ++D++ KS ++D L++E + + G N + + L
Sbjct: 399 FSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTP--NIIVYTSLIHGL 456
Query: 119 AEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNE 177
+ K M D G + N ++ + C+ V+E++ L L + +KP+
Sbjct: 457 CTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDI 516
Query: 178 IAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQM 237
I Y LI G C G + EA+K+ M G +P I +I + ++++ D+A+ +F+
Sbjct: 517 ITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKE 576
Query: 238 MRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
M V + TY I++ + + + A + + K G + + T + I++GL
Sbjct: 577 M-VSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNN 635
Query: 298 RLREAYKVVEEIEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYI 353
EA ++ + + D+ L ++ +I LL+ R EA +F G P + TY
Sbjct: 636 LTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYS 695
Query: 354 MLLQ 357
++ +
Sbjct: 696 LMAE 699
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 98/222 (44%), Gaps = 6/222 (2%)
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYC 188
F +M G + + N ++ C + EA L+ + S +KP+ + YG LI GYC
Sbjct: 503 LFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYC 562
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
V + +A ++ M G P+I + +++ F + A +++ + K L L
Sbjct: 563 RVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSI-TKSGTQLEL 621
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
STY I++ +CK +A M + + ++ + T + +I LL GR+ EA +
Sbjct: 622 STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAA 681
Query: 309 IEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
PD+ Y + + L+ E +F M + GC
Sbjct: 682 HSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCS 723
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 83/194 (42%), Gaps = 26/194 (13%)
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV--- 306
TY I+I C+ G++ + L + K+G D +T + ++ GL A R +A +V
Sbjct: 94 TYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRR 153
Query: 307 --EEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKR---GCEPTMHTYIMLLQGHLG 361
E PD+ Y+ L+KGL R++EA ++ M G P + +Y +L G
Sbjct: 154 MTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFF- 212
Query: 362 KRGRKG---------------PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
K G PD +V + +I + L KA A + + ++ GV
Sbjct: 213 KEGDSDKAYSTYHEMLDRGILPD-VVTYSSI-IAALCKAQAMDKAMEVLNTMVKNGVMPD 270
Query: 407 RFDYNKFLHYYSNE 420
YN LH Y +
Sbjct: 271 CMTYNSILHGYCSS 284
>gi|125548468|gb|EAY94290.1| hypothetical protein OsI_16061 [Oryza sativa Indica Group]
Length = 586
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 160/333 (48%), Gaps = 26/333 (7%)
Query: 70 FAHNSITFNRMVDIIGKSRNID---LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKK 126
+A+N + M +IG+ R D LF +Q+ R + +F + + + V +++K
Sbjct: 219 YAYNKL----MSSLIGRGRVHDVVALFERWIQD--RVYSPDVWSFNVVIKGVCRVGQVQK 272
Query: 127 MVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE--WIKPNEIAYGWLI 184
+ MN+ GC N +V LC+ V ++ +L PN + + +I
Sbjct: 273 ALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVI 332
Query: 185 KGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ-MMRVKRM 243
GYC G L +A ++N M G P+ + +I + K+ A++V+Q M R++
Sbjct: 333 SGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCP 392
Query: 244 DDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
D+ T+ +ID C+ G++ A + +M + I+ + T S II+ L + R EA
Sbjct: 393 PDV--VTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAI 450
Query: 304 KVVEEIE-KPDIS----LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
++ E+ +PDI+ +Y+ +I L + + EA + + M ++GC P +TY +L+ G
Sbjct: 451 CLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIG 510
Query: 359 HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDA 391
+ K ++ +F +V+AG S D+
Sbjct: 511 YCMKS-------RISEAIMFFHEMVEAGCSPDS 536
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 122/273 (44%), Gaps = 7/273 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV--NDKTFKIALMTLAEVRELKKMVNF 130
+++T N +VD + ++ + E L+ + R + N TF + + +L+ +
Sbjct: 288 DTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAV 347
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCD 189
++ M G + N ++ + + A + +++ P+ + + LI GYC
Sbjct: 348 YNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCR 407
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
G L +A +IW+ M +P++ +I + K N+ DEA+ + + ++
Sbjct: 408 CGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAICLLNELNLRPDIAPQAF 467
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA----YKV 305
Y VID +CK GK+ +A + + M ++G D T + +I G + R+ EA +++
Sbjct: 468 IYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEM 527
Query: 306 VEEIEKPDISLYHGLIKGLLRLRRAREATQVFR 338
VE PD + I LL+ E V R
Sbjct: 528 VEAGCSPDSITVNCFISCLLKAGMPNEVDHVMR 560
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/314 (17%), Positives = 137/314 (43%), Gaps = 29/314 (9%)
Query: 142 SLEMLNKVVKTLCQRKLVVEAKYLILKLSEWI--KPNEIAYGWLIKGYCDVGDLIEASK- 198
S +++ LC+ +A L +++ P+ +L+ C +L++AS
Sbjct: 146 SAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSS-CTCANLLDASAT 204
Query: 199 IWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWM 258
+ + ++ G +K++ + + + + +F+ R+ + ++ +VI +
Sbjct: 205 LLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGV 264
Query: 259 CKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK-----PD 313
C+ G++ +A ++E M + G D +T + I+ GL + ++V+ +++ P+
Sbjct: 265 CRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPN 324
Query: 314 ISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKG------ 367
+ + +I G + + +A V+ +M+ G P TY +L+ G+ GK G G
Sbjct: 325 VVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGY-GKVGDLGSAVEVY 383
Query: 368 --------PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYS- 418
P +V F ++ + G + G+ DA + + ++ + ++ +H
Sbjct: 384 QQMTRLRCPPDVVTFSSL-IDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCK 442
Query: 419 ---NEEGVVMFEEV 429
++E + + E+
Sbjct: 443 QNRSDEAICLLNEL 456
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/231 (18%), Positives = 94/231 (40%), Gaps = 22/231 (9%)
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQ 266
PS ++I + + +A+++F M ++ +
Sbjct: 142 SITPSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDA 201
Query: 267 AYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE-----IEKPDISLYHGLI 321
+ T+L + + G + + ++ L+ RGR+ + + E + PD+ ++ +I
Sbjct: 202 SATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVI 261
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG---------------HLGKRGRK 366
KG+ R+ + ++A ++ M + GC P T+ +++ G L + G
Sbjct: 262 KGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVC 321
Query: 367 GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
P+ +V F ++ + G KAGK DA ++ G+ YN ++ Y
Sbjct: 322 MPN-VVTFTSV-ISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGY 370
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 134/292 (45%), Gaps = 7/292 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
N + +N ++ + + E L EM ++ ++D TF I + + + +++
Sbjct: 320 NVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELL 379
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDV 190
M GC + V+ C+ L+ EA L+ +S KPN ++Y ++KG C
Sbjct: 380 EQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSA 439
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G ++A ++ + M +G P+ + +I K ++A+++ + M V L +
Sbjct: 440 GRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSP-DLIS 498
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y VID + K GK +A +L M +GI + + SSI L GR+ + ++ + I+
Sbjct: 499 YSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIK 558
Query: 311 ----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+ D LY+ +I L + A F M+ GC P TY ML++G
Sbjct: 559 DTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKG 610
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 145/303 (47%), Gaps = 26/303 (8%)
Query: 139 CEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEAS 197
C ++ N ++ LC+ L ++ ++SE P+ Y +I G C G L A+
Sbjct: 247 CAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVAN 306
Query: 198 KIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK--RMDDLGLSTYRIVI 255
+I N M G +P++ + +++ + EA ++ M K +DD+ T+ I++
Sbjct: 307 EILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDV---TFNILV 363
Query: 256 DWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----K 311
D+ C+ G + + +LE+M G D +T +++I G G + EA +++ + K
Sbjct: 364 DFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCK 423
Query: 312 PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR------ 365
P+ Y ++KGL R +A ++ +MI++GC P T+ L+ L K+G
Sbjct: 424 PNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLIN-FLCKKGLVEQAIE 482
Query: 366 -------KGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
G P L+++ T+ + GL KAGK+ +A + + ++N+G+ Y+
Sbjct: 483 LLKQMLVNGCSPDLISYSTV-IDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACAL 541
Query: 418 SNE 420
S E
Sbjct: 542 SRE 544
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 86/422 (20%), Positives = 169/422 (40%), Gaps = 31/422 (7%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVN-DKTFKIALMTLAEVRELKKMVNFF 131
N+ TF +V + I E L EM + + + L + V
Sbjct: 110 NAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVL 169
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDV 190
M+ GC N V+ +C++ V EA L+ KL+ + + + ++Y ++KG C
Sbjct: 170 EAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMA 229
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLS 249
+ ++ + M P+I + +I + + +V QM D+ +
Sbjct: 230 KRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM- 288
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
Y +ID +CK G + A +L M G++ + + ++++ GL + R +EA +++ E+
Sbjct: 289 -YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEM 347
Query: 310 EKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------ 359
+ D L ++ L+ + ++ +M+ GC P + TY ++ G
Sbjct: 348 FQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLI 407
Query: 360 ------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
L G P TI + GL AG+ +DA + + +++ +G +N
Sbjct: 408 DEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTL 467
Query: 414 LHYYSNEEGVVMFEEVGKKLREVG----LADLADIFQRYGKKMATRERRR------NRAI 463
+++ + V E+ K++ G L + + GK T E N+ I
Sbjct: 468 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGI 527
Query: 464 EP 465
P
Sbjct: 528 SP 529
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 93/190 (48%), Gaps = 5/190 (2%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
+ PN + +++G C G + +A ++ + M+ +G P + ++E + ++
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
+V + M K L +V++ +C++G + +A +L ++ G EAD ++ ++++ G
Sbjct: 167 RVLEAMHAKGC-TLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKG 225
Query: 293 LLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
L R + ++++E+ + P+I ++ LI L R +V +M + GC P
Sbjct: 226 LCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPD 285
Query: 349 MHTYIMLLQG 358
+ Y ++ G
Sbjct: 286 IRMYATIIDG 295
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 134/292 (45%), Gaps = 7/292 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
N + +N ++ + + E L EM ++ ++D TF I + + + +++
Sbjct: 320 NVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELL 379
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDV 190
M GC + V+ C+ L+ EA L+ +S KPN ++Y ++KG C
Sbjct: 380 EQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSA 439
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G ++A ++ + M +G P+ + +I K ++A+++ + M V L +
Sbjct: 440 GRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSP-DLIS 498
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y VID + K GK +A +L M +GI + + SSI L GR+ + ++ + I+
Sbjct: 499 YSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIK 558
Query: 311 ----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+ D LY+ +I L + A F M+ GC P TY ML++G
Sbjct: 559 DTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKG 610
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 145/303 (47%), Gaps = 26/303 (8%)
Query: 139 CEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEAS 197
C ++ N ++ LC+ L ++ ++SE P+ Y +I G C G L A+
Sbjct: 247 CAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVAN 306
Query: 198 KIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK--RMDDLGLSTYRIVI 255
+I N M G +P++ + +++ + EA ++ M K +DD+ T+ I++
Sbjct: 307 EILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDV---TFNILV 363
Query: 256 DWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----K 311
D+ C+ G + + +LE+M G D +T +++I G G + EA +++ + K
Sbjct: 364 DFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCK 423
Query: 312 PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR------ 365
P+ Y ++KGL R +A ++ +MI++GC P T+ L+ L K+G
Sbjct: 424 PNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLIN-FLCKKGLVEQAIE 482
Query: 366 -------KGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
G P L+++ T+ + GL KAGK+ +A + + ++N+G+ Y+
Sbjct: 483 LLKQMLVNGCSPDLISYSTV-IDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACAL 541
Query: 418 SNE 420
S E
Sbjct: 542 SRE 544
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 86/422 (20%), Positives = 169/422 (40%), Gaps = 31/422 (7%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVN-DKTFKIALMTLAEVRELKKMVNFF 131
N+ TF +V + I E L EM + + + L + V
Sbjct: 110 NAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVL 169
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDV 190
M+ GC N V+ +C++ V EA L+ KL+ + + + ++Y ++KG C
Sbjct: 170 EAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMA 229
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLS 249
+ ++ + M P+I + +I + + +V QM D+ +
Sbjct: 230 KRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM- 288
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
Y +ID +CK G + A +L M G++ + + ++++ GL + R +EA +++ E+
Sbjct: 289 -YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEM 347
Query: 310 EKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------ 359
+ D L ++ L+ + ++ +M+ GC P + TY ++ G
Sbjct: 348 FQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLI 407
Query: 360 ------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
L G P TI + GL AG+ +DA + + +++ +G +N
Sbjct: 408 DEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTL 467
Query: 414 LHYYSNEEGVVMFEEVGKKLREVG----LADLADIFQRYGKKMATRERRR------NRAI 463
+++ + V E+ K++ G L + + GK T E N+ I
Sbjct: 468 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGI 527
Query: 464 EP 465
P
Sbjct: 528 SP 529
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 93/190 (48%), Gaps = 5/190 (2%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
+ PN + +++G C G + +A ++ + M+ +G P + ++E + ++
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
+V + M K L +V++ +C++G + +A +L ++ G EAD ++ ++++ G
Sbjct: 167 RVLEAMHAKGC-TLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKG 225
Query: 293 LLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
L R + ++++E+ + P+I ++ LI L R +V +M + GC P
Sbjct: 226 LCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPD 285
Query: 349 MHTYIMLLQG 358
+ Y ++ G
Sbjct: 286 IRMYATIIDG 295
>gi|225443946|ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 733
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 173/404 (42%), Gaps = 29/404 (7%)
Query: 44 QICNNFPLSW-RPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGR 102
Q+C L V L F Y Q + H+ I + M++I+ K++ L+ M +
Sbjct: 103 QVCAVLQLQTDERVALRFFYWADRQWRYRHDPIVYYAMLEILSKTKLCQGAKRVLRLMAK 162
Query: 103 RRLVN-DKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVE 161
RR+ + F +++ + +L+ + +M G E L + N + L + +
Sbjct: 163 RRIERRPEAFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDK 222
Query: 162 AKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKM-I 219
A + ++ I+PN I Y LIKGYCD+ L +A ++ M +G P DK+
Sbjct: 223 AVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSP-----DKISY 277
Query: 220 ETFFKINKDDEAMKVFQMMRVKRMDDLGL----STYRIVIDWMCKRGKISQAYTMLEEMF 275
T ++ +K +++ K + D L TY + + K G +A L E
Sbjct: 278 YTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAE 337
Query: 276 KRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAR 331
+R D + S+I++ GR+ +A ++V E+ PD+ Y +I GL + R+
Sbjct: 338 ERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVD 397
Query: 332 EATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFD------------TIFV 379
+A ++ R+M K GC+P +Y LL G ++N ++ +
Sbjct: 398 QAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLM 457
Query: 380 GGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGV 423
G + GKS +A V ++ +G + N + EE V
Sbjct: 458 HGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKV 501
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 80/390 (20%), Positives = 169/390 (43%), Gaps = 33/390 (8%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMV 128
F + + ++ +V + +D E + EM + + D T+ + L + R++ +
Sbjct: 341 FRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAK 400
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGY 187
M GC+ + ++ LC+ +EA+ ++ + +W PN I Y L+ G+
Sbjct: 401 KMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGF 460
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
G EA + M +GF P+ ++ +I++ + K DEA K F + +
Sbjct: 461 RREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEA-KRFMEQCLNNGCAVN 519
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
+ + VI C++ + A ++L++M+ D +T ++II L +GR+ EA K+
Sbjct: 520 VVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAM 579
Query: 308 EIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
++ + P Y +I R+ R + ++ +M+ R T + ++
Sbjct: 580 KMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQECRTAYNQVI--------- 630
Query: 364 GRKGPDPLVNFDTI-----FVGGLVKAGKSLDAAK---YVERVMNRGVEVPRFDYNKFLH 415
+ L +F + +G +++ +DA +E +++G +P YN
Sbjct: 631 -----EKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSKG--IPLMSYNVACR 683
Query: 416 YYSNE--EGVVMFEEVGKKLREVGLADLAD 443
++ + + E+V KKL G ++ AD
Sbjct: 684 MFNRNLIPDLKLCEKVSKKLMLEGKSEEAD 713
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 100/236 (42%), Gaps = 37/236 (15%)
Query: 146 LNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
+N ++++LCQ + V EAK + + L+ N + + +I G+C DL A + + M
Sbjct: 488 INLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMY 547
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMK--------------------VFQMMRVKRMD 244
P + +I+ K + +EA K + Q R+ R++
Sbjct: 548 LSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVE 607
Query: 245 DL------------GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
DL + Y VI+ +C G + QAY +L ++ + + D T +I
Sbjct: 608 DLLKLLEKMLSRQECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIES 667
Query: 293 LLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
L++G +Y V + PD+ L + K L+ ++ EA ++ ++RG
Sbjct: 668 YLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGKSEEADKLILRFVERG 723
>gi|147846788|emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
Length = 733
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 172/404 (42%), Gaps = 29/404 (7%)
Query: 44 QICNNFPLSW-RPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGR 102
Q+C L V L F Y Q + H+ I + M++I+ K++ L+ M +
Sbjct: 103 QVCAVLQLQTDERVALRFFYWADRQWRYRHDPIVYYAMLEILSKTKLCQGAKRVLRLMAK 162
Query: 103 RRLVN-DKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVE 161
RR+ + F +++ + +L+ + +M G E L + N + L + +
Sbjct: 163 RRIERRPEAFGYVMVSYSRAGKLRNAMRXLTMMQKAGIEPDLSICNTAIHVLVMGNRLDK 222
Query: 162 AKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKM-I 219
A + ++ I PN I Y LIKGYCD+ L +A ++ M +G P DK+
Sbjct: 223 AVRFLERMQIVEIXPNVITYNCLIKGYCDLHRLEDAXELIAEMPFKGCSP-----DKISY 277
Query: 220 ETFFKINKDDEAMKVFQMMRVKRMDDLGL----STYRIVIDWMCKRGKISQAYTMLEEMF 275
T ++ +K +++ K + D L TY + + K G +A L E
Sbjct: 278 YTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAE 337
Query: 276 KRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAR 331
+R D + S+I++ GR+ +A ++V E+ PD+ Y +I GL + R+
Sbjct: 338 ERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVD 397
Query: 332 EATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFD------------TIFV 379
+A ++ R+M K GC+P +Y LL G ++N ++ +
Sbjct: 398 QAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLM 457
Query: 380 GGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGV 423
G + GKS +A V ++ +G + N + EE V
Sbjct: 458 HGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKV 501
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/391 (20%), Positives = 170/391 (43%), Gaps = 35/391 (8%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMV 128
F + + ++ +V + +D E + EM + + D T+ + L + R++ +
Sbjct: 341 FRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAK 400
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE--WIKPNEIAYGWLIKG 186
M GC+ + ++ LC+ +EA+ + + +SE W PN I Y L+ G
Sbjct: 401 KMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREM-MNMSEEXWWIPNAITYSVLMHG 459
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
+ G EA + M +GF P+ ++ +I++ + K DEA K F + +
Sbjct: 460 FRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEA-KRFMEQCLNNGCAV 518
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
+ + VI C++ + A ++L++M+ D +T ++II L +GR+ EA K+
Sbjct: 519 NVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLA 578
Query: 307 EEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
++ + P Y +I R+ R + ++ +M+ R T + ++
Sbjct: 579 MKMLRVGWIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQECRTAYNQVI-------- 630
Query: 363 RGRKGPDPLVNFDTI-----FVGGLVKAGKSLDAAK---YVERVMNRGVEVPRFDYNKFL 414
+ L +F + +G +++ +DA +E +++G +P YN
Sbjct: 631 ------EKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSKG--IPLMSYNVAC 682
Query: 415 HYYSNE--EGVVMFEEVGKKLREVGLADLAD 443
++ + + E+V KKL G ++ AD
Sbjct: 683 RMFNRNLIPDLKLCEKVSKKLMLEGKSEEAD 713
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 100/236 (42%), Gaps = 37/236 (15%)
Query: 146 LNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
+N ++++LCQ + V EAK + + L+ N + + +I G+C DL A + + M
Sbjct: 488 INLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMY 547
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMK--------------------VFQMMRVKRMD 244
P + +I+ K + +EA K + Q R+ R++
Sbjct: 548 LSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGWIPTPVTYRTVIHQYCRMGRVE 607
Query: 245 DL------------GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
DL + Y VI+ +C G + QAY +L ++ + + D T +I
Sbjct: 608 DLLKLLEKMLSRQECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIES 667
Query: 293 LLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
L++G +Y V + PD+ L + K L+ ++ EA ++ ++RG
Sbjct: 668 YLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGKSEEADKLILRFVERG 723
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 131/303 (43%), Gaps = 51/303 (16%)
Query: 149 VVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGF 208
++ LC+ V EA L+ K+ + P + Y LI G C EA + M G
Sbjct: 87 LIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGC 146
Query: 209 EPSIDVVDKMIETFFKINKDDEAMKVFQMM-----------------------RVKRMDD 245
P I +I F K K D+A++VF+ + R+K D
Sbjct: 147 IPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAID 206
Query: 246 L------------GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
L TY +I C+ GK+ +A +LE M + G D +T ++++ G
Sbjct: 207 LFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGF 266
Query: 294 LARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
RL +AY ++ ++ + PD+ + L+ GL R R +A + EM ++ C PT+
Sbjct: 267 CKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTV 326
Query: 350 HTYIMLLQGHLG----KRGRK-------GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERV 398
+TY +L G+ + RK P +V+F+ I + GL K +S +A + VE
Sbjct: 327 YTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFN-IMIRGLCKVNRSSEAMELVEEA 385
Query: 399 MNR 401
R
Sbjct: 386 RRR 388
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 161/347 (46%), Gaps = 21/347 (6%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIM 134
T+ ++ KS+ D +++ R D T+ + L + LK+ ++ F M
Sbjct: 152 TYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRM 211
Query: 135 NDCG-CEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
G C + N ++ C+ + EA L+ +++E P+ + Y L+ G+C +
Sbjct: 212 IKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLAR 271
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
L +A + N MT +G P + +++ + N+ +A+ + MR K + TY
Sbjct: 272 LDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPT-VYTYN 330
Query: 253 IVIDWMCKRGKISQAYT-MLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK 311
++D C+ ++ +A MLEEM + ++ + +I GL R EA ++VEE +
Sbjct: 331 TILDGYCRANQLEEARKFMLEEM---DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARR 387
Query: 312 ----PDISLYHGLIKGLLRLRRAREATQVFREMIKR-GCEPTMHTYIMLLQGHLGK---- 362
PD+ +Y +I GL R ++ EA +V+R+M++ GC P TY L+ G
Sbjct: 388 RRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLD 447
Query: 363 --RG--RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEV 405
RG KG P + + + KA + DA + ++ ++ RG V
Sbjct: 448 RARGYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRGFGV 494
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 123/283 (43%), Gaps = 20/283 (7%)
Query: 139 CEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEAS 197
C +++ LC+ K + +A + K+ S+ P+ Y +I C L EA
Sbjct: 7 CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66
Query: 198 KIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDW 257
K M + P++ +I+ K + DEA+ + MR K + TY +I
Sbjct: 67 KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPT--AVTYNSLISG 124
Query: 258 MCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPD 313
+CK + S+AY +LEEM G D T +++I G + +A +V E++ +PD
Sbjct: 125 LCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPD 184
Query: 314 ISLYHGLIKGLLRLRRAREATQVFREMIKRG-CEPTMHTYIMLLQGH------------L 360
+ Y LI GL + R +EA +F MIK G C P TY L+ G L
Sbjct: 185 VVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLL 244
Query: 361 GKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
+ G P V T + G K + DA + ++ +G+
Sbjct: 245 ERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGL 287
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 119/258 (46%), Gaps = 21/258 (8%)
Query: 178 IAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQM 237
+ Y LI+G C V L +A M +GF P + +I N+ EA K +
Sbjct: 12 VTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEE 71
Query: 238 MRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
M + + + TY ++ID +CK G++ +A +L +M K+ + +T +S+I GL
Sbjct: 72 MANRNLTP-NVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPT-AVTYNSLISGLCKAE 129
Query: 298 RLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYI 353
R EAY ++EE+ PDI Y LI G + +++ +A +VF +++ RG P + TY
Sbjct: 130 RASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYS 189
Query: 354 MLLQGHLGKRGR------------KGPDPLVNFDTI--FVGGLVKAGKSLDAAKYVERVM 399
L+ G L K GR K + N T + G + GK +A +ER+
Sbjct: 190 CLIDG-LCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248
Query: 400 NRGVEVPRFDYNKFLHYY 417
G Y ++ +
Sbjct: 249 ETGSSPDVVTYTTLMNGF 266
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 155/351 (44%), Gaps = 34/351 (9%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
N +T+ ++D + K +D L +M ++ + T+ + L + + +
Sbjct: 80 NVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLISGLCKAERASEAYDLLE 139
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVG 191
M GC + ++ C+ K +A + +L + +P+ + Y LI G C G
Sbjct: 140 EMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEG 199
Query: 192 DLIEASKIWNLMTDEG-FEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS- 249
L EA ++ M G P+ + +I F ++ K DEAM + + RM + G S
Sbjct: 200 RLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLE-----RMAETGSSP 254
Query: 250 ---TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
TY +++ CK ++ AY +L +M ++G+ D +T +S++ GL RL +A ++
Sbjct: 255 DVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHIL 314
Query: 307 EEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL-- 360
E+ + P + Y+ ++ G R + EA + E + C P + ++ ++++G
Sbjct: 315 GEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMD--CPPNVVSFNIMIRGLCKV 372
Query: 361 ------------GKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVM 399
+R R PD V T + GL + K +D A V R M
Sbjct: 373 NRSSEAMELVEEARRRRCNPD--VVMYTTVIDGLCRE-KKVDEACRVYRKM 420
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 137/327 (41%), Gaps = 22/327 (6%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T+ + L +V+ L++ + F M G + V+ LC + EA+ + ++
Sbjct: 13 TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEM 72
Query: 170 SEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
+ + PN + Y LI G C G + EA + + M + P+ + +I K +
Sbjct: 73 ANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERA 131
Query: 229 DEAMKVF-QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLS 287
EA + +M+ + D + TY +I CK K A + E++ RG D +T S
Sbjct: 132 SEAYDLLEEMVYSGCIPD--IFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYS 189
Query: 288 SIIYGLLARGRLREAYKVVEEIEK-----PDISLYHGLIKGLLRLRRAREATQVFREMIK 342
+I GL GRL+EA + + K P+ Y+ LI G R+ + EA + M +
Sbjct: 190 CLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAE 249
Query: 343 RGCEPTMHTYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLD 390
G P + TY L+ G L + RKG P V T + GL + + D
Sbjct: 250 TGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSD 309
Query: 391 AAKYVERVMNRGVEVPRFDYNKFLHYY 417
A + + + + YN L Y
Sbjct: 310 AVHILGEMRRKSCSPTVYTYNTILDGY 336
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 129/289 (44%), Gaps = 7/289 (2%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT- 117
F K+ C N++T+N ++ + +D L+ M D LM
Sbjct: 207 LFGRMIKSGSCMP-NTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNG 265
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPN 176
++ L + + M G + ++ LC+ + +A +++ ++ + P
Sbjct: 266 FCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPT 325
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
Y ++ GYC L EA K ++ + P++ + MI K+N+ EAM++ +
Sbjct: 326 VYTYNTILDGYCRANQLEEARKF--MLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVE 383
Query: 237 MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKR-GIEADNLTLSSIIYGLLA 295
R +R + + Y VID +C+ K+ +A + +M + G +++T S+++ GL
Sbjct: 384 EARRRRCNP-DVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCN 442
Query: 296 RGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
G L A +E+ P+I Y+ LI + R +A ++ +M++RG
Sbjct: 443 AGMLDRARGYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 99/453 (21%), Positives = 184/453 (40%), Gaps = 97/453 (21%)
Query: 27 HSSLSSCNFNLTHEFFLQICNNFPLSWR----------------PVYLFFQYTQKAQPCF 70
H ++ N + +CN F + W V++ ++A CF
Sbjct: 124 HDTVKEVIMNSRMDMGFPVCNIFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANECF 183
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNF 130
+ R + K+R+ + L + G +LV F
Sbjct: 184 SRM-----RNFRTLPKARSCNFLLHRLSKSGNGQLVR---------------------KF 217
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCD 189
F+ M G S+ N ++ LC+ + ++ L +++ E + P+ + Y LI GY
Sbjct: 218 FNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGK 277
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR---------- 239
VG L E + ++N M D G P I + +I + K K A + F M+
Sbjct: 278 VGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVT 337
Query: 240 -----------------VKRMDDL---GL----STYRIVIDWMCKRGKISQAYTMLEEMF 275
+K + D+ GL TY +ID CK G +++A+ +L +M
Sbjct: 338 YSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDML 397
Query: 276 KRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDIS----LYHGLIKGLLRLRRAR 331
+ G++ + +T ++++ GL GR+ EA +V + K IS +Y L+ G ++ R
Sbjct: 398 QAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERME 457
Query: 332 EATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK--------------GPDPLVNFDTI 377
+A ++ ++M + +P + Y ++ GH +R + +P+++ T
Sbjct: 458 DAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVIS--TT 515
Query: 378 FVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY 410
+ KAGKS DA + + + + GVE Y
Sbjct: 516 IIDAYFKAGKSSDALNFFQEMQDVGVEATIVTY 548
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 143/333 (42%), Gaps = 41/333 (12%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
N T+ ++D K+ N+ W+ L +M + + +N T+ L L + + + F
Sbjct: 369 NEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVF 428
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDV 190
M G + ++ +V + + + +A ++ +++E IKP+ I YG +I G+C
Sbjct: 429 RSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQ 488
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR----------- 239
L E I M G + + +I+ +FK K +A+ FQ M+
Sbjct: 489 RKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTY 548
Query: 240 -------------------VKRMDDLGL----STYRIVIDWMCKRGKISQAYTMLEEMFK 276
RM LGL + Y +ID +C I A + +EM
Sbjct: 549 CVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQC 608
Query: 277 RGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP----DISLYHGLIKGLLRLRRARE 332
RG+ D +++I G L G L+EA ++ + + D+ +Y L+ G + +
Sbjct: 609 RGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQ 668
Query: 333 ATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
A + F EMI++G P I LL+ + KRG+
Sbjct: 669 ARKFFNEMIEKGILPEEVLCICLLREYY-KRGQ 700
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 149/366 (40%), Gaps = 49/366 (13%)
Query: 71 AHNSI---TFNRMVDIIGKSRNI-DLFWETLQEMGRRRLVNDKTFKI--ALMTLAEVRE- 123
AH+++ N +D+ NI D+ W T V D F + L L E E
Sbjct: 123 AHDTVKEVIMNSRMDMGFPVCNIFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANEC 182
Query: 124 LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWL 183
+M NF + C + L L+K RK + + I P+ Y +
Sbjct: 183 FSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM------IGAGIAPSVFTYNVM 236
Query: 184 IKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM 243
I C GDL + +++ M + G P + + +I+ + K+ +E +F M+
Sbjct: 237 IDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMK---- 292
Query: 244 DDLG----LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
D+G + TY +I+ CK K+ +A+ EM G++ + +T S++I G +
Sbjct: 293 -DVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMM 351
Query: 300 REAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
+ A K++ ++ + P+ Y LI + EA ++ +M++ G + + TY L
Sbjct: 352 QGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTAL 411
Query: 356 LQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
L G L KAG+ ++A + ++ G+ + Y +H
Sbjct: 412 LDG-----------------------LCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVH 448
Query: 416 YYSNEE 421
Y E
Sbjct: 449 GYIKAE 454
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 91/206 (44%), Gaps = 16/206 (7%)
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
TY ++ID++CK G + + + +M + G+ D +T +S+I G G L E + E+
Sbjct: 232 TYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEM 291
Query: 310 EK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML---------L 356
+ PDI Y+GLI + + A + F EM G +P + TY L +
Sbjct: 292 KDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMM 351
Query: 357 QGH---LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
QG L R G P T + KAG +A K + ++ GV++ Y
Sbjct: 352 QGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTAL 411
Query: 414 LHYYSNEEGVVMFEEVGKKLREVGLA 439
L ++ EEV + + + G++
Sbjct: 412 LDGLCKAGRMIEAEEVFRSMLKDGIS 437
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 104/251 (41%), Gaps = 29/251 (11%)
Query: 128 VNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLV-VEAKYLILKLSEWIKPNEIAYGWLIKG 186
+NFF M D G E ++ ++ LC+ +V + Y LS ++PN Y LI G
Sbjct: 530 LNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDG 589
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
C + A K+++ M G P I +I+ K EA+ + + RM +L
Sbjct: 590 LCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVL-----ISRMTEL 644
Query: 247 G----LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
L Y ++ + G++ QA EM ++GI + + ++ RG+L EA
Sbjct: 645 AIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEA 704
Query: 303 YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML---LQGH 359
++ E+E+ S +A + E +G T+H Y+ L +Q
Sbjct: 705 IELKNEMERMAYSFEF-------------DAQLAYNE---QGVNLTLHAYLYLKFDIQHQ 748
Query: 360 LGKRGRKGPDP 370
L + G P
Sbjct: 749 LNRFGTSTMGP 759
>gi|297848576|ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338011|gb|EFH68428.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 662
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 170/389 (43%), Gaps = 41/389 (10%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+T+N M+ K+ E L+ M + L DK T+ + + V +
Sbjct: 258 VTYNTMIKGYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSSCVALYQE 317
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK--LSEWIKPNEIAYGWLIKGYCDVG 191
M++ G + + V+ LC+ + E Y + + + + KPN Y LI GY G
Sbjct: 318 MDEKGLQVPPHAFSLVIGGLCKEGKLNEG-YAVFENMIRKGSKPNVAIYTVLIDGYAKTG 376
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST- 250
+ +A ++ + M DEGF P + ++ K + +EAM FQ R + L +++
Sbjct: 377 SVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTC---RFNGLAINSM 433
Query: 251 -YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA---YKVV 306
Y +ID + K G++ +A + EEM ++G D+ +++I G++ EA +K +
Sbjct: 434 FYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRM 493
Query: 307 EEIEKPDISLYHG--LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL--GK 362
EE E D ++Y LI G+ + R EA +++ MI +G PT L G GK
Sbjct: 494 EEEEGCDQTVYTYTILISGMFKEHRNEEALKLWDMMIDKGITPTAACLRALSTGLCLSGK 553
Query: 363 RGR--KGPDPLVNFDTIF-------VGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
R K D L I + L KAG+ +A K + + RG EVP
Sbjct: 554 VARACKILDELAPMGVILDAACEDMINTLCKAGRIKEACKLADGITERGREVP------- 606
Query: 414 LHYYSNEEGVVMFEEVGKKLREVGLADLA 442
VM LR+VG ADLA
Sbjct: 607 -----GRIRTVMI----NALRKVGKADLA 626
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/407 (21%), Positives = 172/407 (42%), Gaps = 66/407 (16%)
Query: 56 VYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIAL 115
+ FF +++K Q + HN + +VD++ ++++D E+ + + +L
Sbjct: 135 AWSFFCWSRK-QKKYTHNLECYVSLVDVLALAKDVDRIRFICSEIRKFEFPMTVSPGNSL 193
Query: 116 M-TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWI 173
+ + ++ +++++ + M + G E +L N ++ L V A+ + + S I
Sbjct: 194 IKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRI 253
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
KP+ + Y +IKGYC G +A + +M +G E MI+ + + +
Sbjct: 254 KPDVVTYNTMIKGYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSSCVA 313
Query: 234 VFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKR------------ 277
++Q MD+ GL + +VI +CK GK+++ Y + E M ++
Sbjct: 314 LYQ-----EMDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVL 368
Query: 278 -----------------------GIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDI 314
G D +T S ++ GL GR+ EA + +
Sbjct: 369 IDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGL 428
Query: 315 SL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR----- 365
++ Y LI GL + R EA ++F EM ++GC + Y L+ K G+
Sbjct: 429 AINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDA-FTKHGKVDEAL 487
Query: 366 ---------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
+G D V TI + G+ K ++ +A K + ++++G+
Sbjct: 488 ALFKRMEEEEGCDQTVYTYTILISGMFKEHRNEEALKLWDMMIDKGI 534
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 101/240 (42%), Gaps = 5/240 (2%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMV 128
F + +T++ +V+ + K+ ++ + Q L + F +L+ L + + +
Sbjct: 393 FNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEAE 452
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGW--LIKG 186
F M++ GC N ++ + V EA L ++ E ++ Y + LI G
Sbjct: 453 RLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRMEEEEGCDQTVYTYTILISG 512
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
EA K+W++M D+G P+ + + K A K+ + M +
Sbjct: 513 MFKEHRNEEALKLWDMMIDKGITPTAACLRALSTGLCLSGKVARACKILD--ELAPMGVI 570
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
+ +I+ +CK G+I +A + + + +RG E + +I L G+ A K++
Sbjct: 571 LDAACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMKLM 630
>gi|222422989|dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]
Length = 536
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 148/313 (47%), Gaps = 15/313 (4%)
Query: 58 LFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALM 116
L Q + C NS+ N +V + + LF E L R + ND KTF I +
Sbjct: 160 LLLQSFEVEGCCMVVNSL-LNTLVKLDRVEDAMKLFDEHL----RFQSCNDTKTFNILIR 214
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI--LKLSEWIK 174
L V + +K + +M+ GCE + N +++ C+ + +A + +K
Sbjct: 215 GLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCS 274
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+ + Y +I GYC G + EAS + + M G P+ + +++ + K + A ++
Sbjct: 275 PDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEI 334
Query: 235 -FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
+M+ D+ T+ +ID C+ G++SQ + + EEM RG+ + T S +I L
Sbjct: 335 RGKMISFGCFPDV--VTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINAL 392
Query: 294 LARGRLREAYKVVEEIEKPDIS----LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
RL +A +++ ++ DI +Y+ +I G + + EA + EM K+ C+P
Sbjct: 393 CNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDK 452
Query: 350 HTYIMLLQGHLGK 362
T+ +L+ GH K
Sbjct: 453 ITFTILIIGHCMK 465
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 140/299 (46%), Gaps = 23/299 (7%)
Query: 141 YSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKI 199
+S N + ++LC+ L A + + S+ + PN G+L+ + + G L A+ +
Sbjct: 101 HSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATAL 160
Query: 200 WNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLSTYRIVIDWM 258
L+ E VV+ ++ T K+++ ++AMK+F + +R + +D T+ I+I +
Sbjct: 161 --LLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDT--KTFNILIRGL 216
Query: 259 CKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK-----PD 313
C GK +A +L M G E D +T +++I G L +A ++ ++++ PD
Sbjct: 217 CGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPD 276
Query: 314 ISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL------------G 361
+ Y +I G + + REA+ + +M++ G PT T+ +L+ G+ G
Sbjct: 277 VVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRG 336
Query: 362 KRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE 420
K G P V T + G + G+ + E + RG+ F Y+ ++ NE
Sbjct: 337 KMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNE 395
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 128/271 (47%), Gaps = 17/271 (6%)
Query: 145 MLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEI-AYGWLIKGYCDVGDLIEASKIWNLM 203
++N ++ TL + V +A L + + N+ + LI+G C VG +A ++ +M
Sbjct: 173 VVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVM 232
Query: 204 TDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGK 263
+ G EP I + +I+ F K N+ ++A ++F+ ++ + + TY +I CK GK
Sbjct: 233 SGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGK 292
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHG 319
+ +A ++L++M + GI N+T + ++ G G + A ++ ++ PD+ +
Sbjct: 293 MREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTS 352
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG------------HLGKRGRKG 367
LI G R+ + + +++ EM RG P TY +L+ LG+ K
Sbjct: 353 LIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKD 412
Query: 368 PDPLVNFDTIFVGGLVKAGKSLDAAKYVERV 398
P + G KAGK +A VE +
Sbjct: 413 IIPQPFMYNPVIDGFCKAGKVNEANVIVEEM 443
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 75/180 (41%), Gaps = 3/180 (1%)
Query: 69 CFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKM 127
CF + +TF ++D + + + +EM R + N T+ I + L L K
Sbjct: 343 CFP-DVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKA 401
Query: 128 VNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKG 186
+ M N V+ C+ V EA ++ ++ + KP++I + LI G
Sbjct: 402 RELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIG 461
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
+C G + EA I++ M G P V ++ K EA + Q+ R + +++
Sbjct: 462 HCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNV 521
>gi|15225031|ref|NP_178657.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42570711|ref|NP_973429.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216767|sp|Q9ZUE9.1|PP149_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g06000
gi|4006835|gb|AAC95177.1| hypothetical protein [Arabidopsis thaliana]
gi|110736272|dbj|BAF00106.1| hypothetical protein [Arabidopsis thaliana]
gi|330250896|gb|AEC05990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330250897|gb|AEC05991.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 536
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 148/313 (47%), Gaps = 15/313 (4%)
Query: 58 LFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALM 116
L Q + C NS+ N +V + + LF E L R + ND KTF I +
Sbjct: 160 LLLQSFEVEGCCMVVNSL-LNTLVKLDRVEDAMKLFDEHL----RFQSCNDTKTFNILIR 214
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI--LKLSEWIK 174
L V + +K + +M+ GCE + N +++ C+ + +A + +K
Sbjct: 215 GLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCS 274
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+ + Y +I GYC G + EAS + + M G P+ + +++ + K + A ++
Sbjct: 275 PDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEI 334
Query: 235 -FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
+M+ D+ T+ +ID C+ G++SQ + + EEM RG+ + T S +I L
Sbjct: 335 RGKMISFGCFPDV--VTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINAL 392
Query: 294 LARGRLREAYKVVEEIEKPDIS----LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
RL +A +++ ++ DI +Y+ +I G + + EA + EM K+ C+P
Sbjct: 393 CNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDK 452
Query: 350 HTYIMLLQGHLGK 362
T+ +L+ GH K
Sbjct: 453 ITFTILIIGHCMK 465
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 140/299 (46%), Gaps = 23/299 (7%)
Query: 141 YSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKI 199
+S N + ++LC+ L A + + S+ + PN G+L+ + + G L A+ +
Sbjct: 101 HSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATAL 160
Query: 200 WNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLSTYRIVIDWM 258
L+ E VV+ ++ T K+++ ++AMK+F + +R + +D T+ I+I +
Sbjct: 161 --LLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDT--KTFNILIRGL 216
Query: 259 CKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK-----PD 313
C GK +A +L M G E D +T +++I G L +A ++ ++++ PD
Sbjct: 217 CGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPD 276
Query: 314 ISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL------------G 361
+ Y +I G + + REA+ + +M++ G PT T+ +L+ G+ G
Sbjct: 277 VVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRG 336
Query: 362 KRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE 420
K G P V T + G + G+ + E + RG+ F Y+ ++ NE
Sbjct: 337 KMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNE 395
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 128/271 (47%), Gaps = 17/271 (6%)
Query: 145 MLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEI-AYGWLIKGYCDVGDLIEASKIWNLM 203
++N ++ TL + V +A L + + N+ + LI+G C VG +A ++ +M
Sbjct: 173 VVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVM 232
Query: 204 TDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGK 263
+ G EP I + +I+ F K N+ ++A ++F+ ++ + + TY +I CK GK
Sbjct: 233 SGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGK 292
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHG 319
+ +A ++L++M + GI N+T + ++ G G + A ++ ++ PD+ +
Sbjct: 293 MREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTS 352
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG------------HLGKRGRKG 367
LI G R+ + + +++ EM RG P TY +L+ LG+ K
Sbjct: 353 LIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKD 412
Query: 368 PDPLVNFDTIFVGGLVKAGKSLDAAKYVERV 398
P + G KAGK +A VE +
Sbjct: 413 IIPQPFMYNPVIDGFCKAGKVNEANVIVEEM 443
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 75/180 (41%), Gaps = 3/180 (1%)
Query: 69 CFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKM 127
CF + +TF ++D + + + +EM R + N T+ I + L L K
Sbjct: 343 CFP-DVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKA 401
Query: 128 VNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKG 186
+ M N V+ C+ V EA ++ ++ + KP++I + LI G
Sbjct: 402 RELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIG 461
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
+C G + EA I++ M G P V ++ K EA + Q+ R + +++
Sbjct: 462 HCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNV 521
>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
Length = 432
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 135/283 (47%), Gaps = 4/283 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N+ T+N +VD + K +D + E +R D T+ + L ++ + + + F
Sbjct: 131 NAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATF 190
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDV 190
M + G +L N ++ LC+ + + +A + ++ + PN + Y +I G C
Sbjct: 191 TQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKS 250
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
L EA ++ + M EG P + ++ F + D A+ + + M V + + T
Sbjct: 251 DQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRM-VSQGCIPDVVT 309
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y +VID +CK G++ A+ + E+ + +T S++I G R+ E KV+ E+
Sbjct: 310 YTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREMA 369
Query: 311 -KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
+P++ Y+ +I GL + R EA +FREM + G P TY
Sbjct: 370 CRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTY 412
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 148/339 (43%), Gaps = 45/339 (13%)
Query: 65 KAQPC-FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVR 122
+ PC +S+T+N ++ + ++D + L+EM + ND+T I L L
Sbjct: 15 RENPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCG 74
Query: 123 ELKKMVNFF-------HIMNDC------------------------------GCEYSLEM 145
+ + + F H D GC +
Sbjct: 75 RVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFT 134
Query: 146 LNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
N +V LC++ + A+ +I + + P+ + Y L+ +G + EA + MT
Sbjct: 135 YNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMT 194
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
+EG+ P++ + +I + + +A++VF M + R L TY +VID +CK ++
Sbjct: 195 EEGYVPTLVSFNAIITGLCRARRLADALEVFNEM-IDRDFHPNLVTYSVVIDGLCKSDQL 253
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY----KVVEEIEKPDISLYHGL 320
+A +L+ M G D + + ++ G A GRL A ++V + PD+ Y +
Sbjct: 254 DEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVV 313
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
I L ++ R +A ++FRE++ C P + TY L+ G+
Sbjct: 314 IDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGY 352
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 164/376 (43%), Gaps = 25/376 (6%)
Query: 92 LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVK 151
LF E LQ +V+ F L +A++ + ++ FH M + G + L ++
Sbjct: 602 LFCEMLQSRPIPSIVD---FTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIH 658
Query: 152 TLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEP 210
C+ A L+ K+ + +P+ + G L+ G+C EA + + M + G EP
Sbjct: 659 CFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEP 718
Query: 211 SIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTM 270
++ + + +I K + A+++F M K + + TY +I +C G+ + A +
Sbjct: 719 NVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAV-TYNTLISGLCNSGRWTDAARL 777
Query: 271 LEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLR 326
L +M KR I+ + + +++I + G L EA + +E+ + P+I Y+ LI G
Sbjct: 778 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCI 837
Query: 327 LRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL-GKRGRKGPDPLVNFD---------- 375
R +A +F M+ +GC P + TY L+ G KR G
Sbjct: 838 QGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFT 897
Query: 376 -TIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN----EEGVVMFEEVG 430
+ G +AGK A K R+++ GV YN L N E+ +VM E++
Sbjct: 898 YNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQ 957
Query: 431 KKLREVGLADLADIFQ 446
K +V + I Q
Sbjct: 958 KNQMDVDIITYNIIIQ 973
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 146/333 (43%), Gaps = 31/333 (9%)
Query: 90 IDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKV 149
+DLF E +Q +V+ F L +A +R + ++ F M G + L +
Sbjct: 50 LDLFLEMVQSQPLPSVVD---FTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTIL 106
Query: 150 VKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGF 208
+ C+ + A ++ K+ + P+ + +G L+ G+C + +A + M G+
Sbjct: 107 IHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGY 166
Query: 209 EPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAY 268
EP++ V + +I+ K + A+++ M K L TY ++ +C G+ QA
Sbjct: 167 EPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAA 226
Query: 269 TMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGL 324
+L +M KR I D T +++I + +G L EA ++ +++ + P+ Y+ LI GL
Sbjct: 227 RILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGL 286
Query: 325 LRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVK 384
R A + F M +GC P + TY + L+N G K
Sbjct: 287 CMHGRLYHAKKTFDLMASKGCFPNVVTY----------------NTLIN-------GFCK 323
Query: 385 AGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
+ + D K +R+ G+ F YN +H Y
Sbjct: 324 SRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGY 356
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 144/305 (47%), Gaps = 7/305 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N + +N +++ + K+R+++ E M ++ +V D T+ + L
Sbjct: 719 NVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLL 778
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
M + ++ ++ T + ++EAK L ++ + PN + Y LI G+C
Sbjct: 779 RDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQ 838
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G L +A +++LM +G P + + +I F K + ++ MK+F M + + T
Sbjct: 839 GRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAF-T 897
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y +I C+ GK++ A + M G+ D +T + ++ L G++ +A +VE+++
Sbjct: 898 YNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQ 957
Query: 311 KP----DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK 366
K DI Y+ +I+G+ R + +EA +FR + ++G + YI ++ G R+
Sbjct: 958 KNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRR 1017
Query: 367 GPDPL 371
D L
Sbjct: 1018 EADKL 1022
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 141/297 (47%), Gaps = 15/297 (5%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALM-TLAEVRELKKMVNFF 131
+++T+N ++ + S L++M +R++ + F AL+ T + L + N +
Sbjct: 754 DAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLY 813
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDV 190
M ++ N ++ C + + +AK++ L +S+ P+ + Y LI G+C
Sbjct: 814 KEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKS 873
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS- 249
+ + K++ MT +G + +I + + K + A KVF RM D G+
Sbjct: 874 KRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFN-----RMVDCGVPP 928
Query: 250 ---TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
TY I++D +C GKI +A M+E++ K ++ D +T + II G+ +++EA+ +
Sbjct: 929 DIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLF 988
Query: 307 EEIEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
+ + + L Y +I GL R REA ++ M + G P+ Y L+ H
Sbjct: 989 RSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYDETLRDH 1045
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 153/381 (40%), Gaps = 54/381 (14%)
Query: 42 FLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMG 101
F + + F L R F + + N + +N ++D + K+ ++++ E L EM
Sbjct: 138 FGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEME 197
Query: 102 RR-RLVND-KTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLV 159
++ RL D T+ L L E ++ M + ++ ++ +
Sbjct: 198 KKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNL 257
Query: 160 VEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKM 218
EA+ L + L I PN + Y LI G C G L A K ++LM +G P++ + +
Sbjct: 258 DEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTL 317
Query: 219 IETFFKINKDDEAMKVFQMMRVKRMDDLGLS-TYRIVIDWMCKRGKISQAYTMLEEMFKR 277
I F K + ++ MK+FQ R+ R +G + TY +I C+ GK+ A + M
Sbjct: 318 INGFCKSRRVEDGMKLFQ--RMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSC 375
Query: 278 GIEADNLTLSSIIYGLLARGRLREAY-----------------------------KVVEE 308
G+ D +T +++GL G + A KV E
Sbjct: 376 GVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEA 435
Query: 309 IE----------KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
E KPD Y +I GL + REA ++FR M + G ++ Q
Sbjct: 436 WELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDG---------IICQA 486
Query: 359 HLGKRGRKGPDPLVNFDTIFV 379
G G G + V+ TI +
Sbjct: 487 EDGHLGEHGTNNQVSLGTIII 507
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 81/195 (41%), Gaps = 38/195 (19%)
Query: 66 AQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVREL 124
++ CF + +T+N ++ KS+ ++ + EM + LV D T+ + + +L
Sbjct: 853 SKGCFP-DVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKL 911
Query: 125 KKMVNFFHIMNDCGC--------------------EYSLEML---------------NKV 149
F+ M DCG E +L M+ N +
Sbjct: 912 NVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNII 971
Query: 150 VKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGF 208
++ +C+ V EA L L+ + +K + IAY +I G C G EA K+ M ++GF
Sbjct: 972 IQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGF 1031
Query: 209 EPSIDVVDKMIETFF 223
PS + D+ + +
Sbjct: 1032 MPSERIYDETLRDHY 1046
>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
Length = 1765
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 139/301 (46%), Gaps = 8/301 (2%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMV 128
F +T+ +++ +GK +++ EM +R N + + + L + R + +
Sbjct: 1213 FLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAM 1272
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGY 187
M GC+ + N ++ LC V +A++ + + + + PN+++Y LI G+
Sbjct: 1273 VILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGF 1332
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C G+L+ AS + M G P + +I K EA+ V + M +R
Sbjct: 1333 CMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKM-TERQVFPD 1391
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
++ Y ++I +CK+ + A +LEEM ++ ++ D +++I G + L +A K+ E
Sbjct: 1392 VNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFE 1451
Query: 308 EIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
+E PDI + +IKG + EA M K GC P TY ++ G+ K+
Sbjct: 1452 FMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGY-AKQ 1510
Query: 364 G 364
G
Sbjct: 1511 G 1511
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 128/293 (43%), Gaps = 20/293 (6%)
Query: 149 VVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEG 207
+V+ LC + V E LI + P+ + Y LI GYC GD+ + M +G
Sbjct: 1153 LVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKG 1212
Query: 208 FEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQA 267
F P++ +I K ++ +F MR KR + Y VID +CK +QA
Sbjct: 1213 FLPTLVTYGSLINWLGKKGDLEKIGSLFLEMR-KRGFSPNVQIYNSVIDALCKCRSATQA 1271
Query: 268 YTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKG 323
+L++MF G + D +T +++I GL G +R+A + E + P+ Y LI G
Sbjct: 1272 MVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHG 1331
Query: 324 LLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL------------GKRGRKGPDPL 371
A+ + EM+ RG P + T+ L+ G + K + P
Sbjct: 1332 FCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPD 1391
Query: 372 VNFDTIFVGGLVKAGKSLDAAKYV-ERVMNRGVEVPRFDYNKFLHYYSNEEGV 423
VN + + GL K + L AAK + E ++ + V+ F Y + + E +
Sbjct: 1392 VNIYNVLISGLCKK-RMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENL 1443
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 126/307 (41%), Gaps = 30/307 (9%)
Query: 77 FNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRE--LKKMVNFFHIM 134
+N ++ + K R + L+EM + + D+ F A + +R L F M
Sbjct: 1395 YNVLISGLCKKRMLPAAKNILEEMLEKNVQPDE-FVYATLIDGFIRSENLGDARKIFEFM 1453
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIK----PNEIAYGWLIKGYCDV 190
G + N ++K CQ ++ EA IL +S K P+E Y +I GY
Sbjct: 1454 EHKGICPDIVSCNAMIKGYCQFGMMSEA---ILCMSNMRKVGCIPDEFTYTTVISGYAKQ 1510
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G+L A + M +P++ +I + K D A +F M+ + + + T
Sbjct: 1511 GNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSP-NVVT 1569
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA--------------- 295
Y I+I + K+ K+ +A E M +++TL ++ GL +
Sbjct: 1570 YTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSE 1629
Query: 296 -RGR---LREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
G+ L K+V +I P S Y+ +I L R REA M K+G P T
Sbjct: 1630 VHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPIT 1689
Query: 352 YIMLLQG 358
++ LL G
Sbjct: 1690 FLSLLYG 1696
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 53/267 (19%), Positives = 98/267 (36%), Gaps = 55/267 (20%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDE-GFEPSIDVVDKMIETFFKINKDDEAMK 233
P G L+ Y D G L +A+K+ + ++ G P + +++++ + + D+A K
Sbjct: 1074 PTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARK 1133
Query: 234 VFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
++ +EM + ADN + ++ GL
Sbjct: 1134 LY------------------------------------DEMLGKDSGADNYSTCVLVRGL 1157
Query: 294 LARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
R+ E K++E P + Y+ LI G R + EM +G PT+
Sbjct: 1158 CLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTL 1217
Query: 350 HTYIMLLQGHLGKRG-------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVE 396
TY L+ LGK+G ++G P V + L K + A ++
Sbjct: 1218 VTYGSLIN-WLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILK 1276
Query: 397 RVMNRGVEVPRFDYNKFLHYYSNEEGV 423
++ G + +N + +E V
Sbjct: 1277 QMFASGCDPDIITFNTLITGLCHEGHV 1303
>gi|15220166|ref|NP_178170.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75264854|sp|Q9M8M3.1|PP136_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g80550, mitochondrial; Flags: Precursor
gi|6730729|gb|AAF27119.1|AC018849_7 unknown protein; 31926-33272 [Arabidopsis thaliana]
gi|332198297|gb|AEE36418.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 448
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 167/377 (44%), Gaps = 29/377 (7%)
Query: 53 WRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEM--GRRRLVNDKT 110
W+ FF + ++ + F H + TFNR++DI+GK ++ W + M + N T
Sbjct: 61 WQKALEFFNWVER-ESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVT 119
Query: 111 FKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL- 169
F+I +++ ++ + ++D N +V LC+ K VVEA+ L
Sbjct: 120 FRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYN-LVDALCEHKHVVEAEELCFGKN 178
Query: 170 ---SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKIN 226
+ + N + +++G+ +G + + W M EG + ++ K
Sbjct: 179 VIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSG 238
Query: 227 KDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTL 286
K +A+K+++ M+ +RM L + Y VI + + + EM +RG E + T
Sbjct: 239 KPWKAVKLYKEMKSRRM-KLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATH 297
Query: 287 SSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIK 342
++II L GR+R+AY++++E+ K PD Y L RL + E +F MI+
Sbjct: 298 NTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFS---RLEKPSEILSLFGRMIR 354
Query: 343 RGCEPTMHTYIMLLQ-----GHL-------GKRGRKGPDPLVNFDTIFVGGLVKAGKSLD 390
G P M TY+ML++ G L G P + L++ G
Sbjct: 355 SGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDM 414
Query: 391 AAKYVERVMNRGVEVPR 407
A +Y E ++ RG+ PR
Sbjct: 415 AREYEEEMIERGLS-PR 430
>gi|9758456|dbj|BAB08985.1| membrane-associated salt-inducible protein-like [Arabidopsis
thaliana]
Length = 949
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 137/293 (46%), Gaps = 8/293 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGR-RRLVNDKTFKIALMTLAEVRELKKMVNFFHI 133
I +N ++ N+D +T++EM + R +TF + A+ ++++ + F +
Sbjct: 555 ILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDM 614
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDL 193
M CGC ++ N ++ L +++ VE L + NE Y +++GY VGD
Sbjct: 615 MRRCGCVPTVHTFNGLINGLVEKRQAVE--ILDEMTLAGVSANEHTYTKIMQGYASVGDT 672
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
+A + + + +EG + I + +++ K + A+ V + M + + Y I
Sbjct: 673 GKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSF-VYNI 731
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE--- 310
+ID +RG + +A ++++M K G++ D T +S I G + A + +EE+E
Sbjct: 732 LIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALG 791
Query: 311 -KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
KP+I Y LIKG R +A + EM G +P Y LL L +
Sbjct: 792 VKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSR 844
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 103/244 (42%), Gaps = 31/244 (12%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P + YG LI Y VG + +A ++ +M +EG + ++ MI F K+ A V
Sbjct: 482 PTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAV 541
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
F+ M VK + Y +I C G + +A ++EM K T II+G
Sbjct: 542 FEDM-VKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYA 600
Query: 295 ARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
G +R + +V + + + P + ++GLI GL+ R+A ++ EM G H
Sbjct: 601 KSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLV---EKRQAVEILDEMTLAGVSANEH 657
Query: 351 TYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY 410
TY ++QG+ G + A +Y R+ N G++V F Y
Sbjct: 658 TYTKIMQGY-----------------------ASVGDTGKAFEYFTRLQNEGLDVDIFTY 694
Query: 411 NKFL 414
L
Sbjct: 695 EALL 698
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 138/315 (43%), Gaps = 27/315 (8%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK- 168
T+ + +V ++ K + +M + G +++L+ + ++ + K A + + +
Sbjct: 486 TYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANA-FAVFED 544
Query: 169 -LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINK 227
+ E +KP+ I Y +I +C +G++ A + M P+ +I + K
Sbjct: 545 MVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGD 604
Query: 228 DDEAMKVFQMMRVKRMDDL-GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTL 286
+++VF MMR R + + T+ +I+ + ++ QA +L+EM G+ A+ T
Sbjct: 605 MRRSLEVFDMMR--RCGCVPTVHTFNGLINGLVEK---RQAVEILDEMTLAGVSANEHTY 659
Query: 287 SSIIYGLLARGRLREAYKVVEEIEKP----DISLYHGLIKGLLRLRRAREATQVFREMIK 342
+ I+ G + G +A++ ++ DI Y L+K + R + A V +EM
Sbjct: 660 TKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSA 719
Query: 343 RGCEPTMHTYIMLLQGHLGKRG-------------RKGPDPLVNFDTIFVGGLVKAGKSL 389
R Y +L+ G +RG ++G P ++ T F+ KAG
Sbjct: 720 RNIPRNSFVYNILIDG-WARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMN 778
Query: 390 DAAKYVERVMNRGVE 404
A + +E + GV+
Sbjct: 779 RATQTIEEMEALGVK 793
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 98/234 (41%), Gaps = 14/234 (5%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIM 134
TFN +++ + + R E L EM + N+ T+ + A V + K +F +
Sbjct: 626 TFNGLINGLVEKRQA---VEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRL 682
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKP-NEIAYGWLIKGYCDVGDL 193
+ G + + ++K C+ + A + ++S P N Y LI G+ GD+
Sbjct: 683 QNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDV 742
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG----LS 249
EA+ + M EG +P I I K + A + ++ M+ LG +
Sbjct: 743 WEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQT-----IEEMEALGVKPNIK 797
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
TY +I + +A + EEM GI+ D ++ LL+R + EAY
Sbjct: 798 TYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAY 851
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 86/189 (45%), Gaps = 7/189 (3%)
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
KP+ +G ++K Y GD+ A + + M G P+ + +I + DEA+
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALS 365
Query: 234 VFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTL-SSIIYG 292
+ M+ + + ++ L TY +++ K G A +E KR + N ++ IIY
Sbjct: 366 CVRKMKEEGI-EMSLVTYSVIVGGFSKAGHAEAADYWFDEA-KRIHKTLNASIYGKIIYA 423
Query: 293 LLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
+ A +V E+E+ I++YH ++ G + ++ VF+ + + G PT
Sbjct: 424 HCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPT 483
Query: 349 MHTYIMLLQ 357
+ TY L+
Sbjct: 484 VVTYGCLIN 492
>gi|356497996|ref|XP_003517841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 600
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 90/422 (21%), Positives = 177/422 (41%), Gaps = 72/422 (17%)
Query: 55 PVYLFFQYTQKAQPCF---AHNSITFN----------RMVDIIGKSRNIDL---FWETLQ 98
P+ +F + ++P +H+S TF+ + +D + ++++D+ F+ +
Sbjct: 16 PLLRYFASSSNSKPFLLHPSHSSSTFSFVSDSDTSRAQFLDSMRNAKSVDVALDFYHKMV 75
Query: 99 EMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQ-RK 157
M V D F + +A+++ ++ M+ G + ++ LN V+ LC+
Sbjct: 76 TMKPFPCVKD--FNLLFSIVAKMKHYTTAISLIKHMSYIGVKPTVHTLNIVINCLCRLSH 133
Query: 158 LVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDK 217
V L L ++P+ + + ++ G C G++ +A + + + D G+E
Sbjct: 134 AVFGFSVLGLMFKIGVEPSIVTFNTIVNGLCVEGNVAQAIRFVDHLKDMGYESDSYTCGA 193
Query: 218 MIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKR 277
+ K+ A+ + M K + L ++ Y V+D +CK G + +A + +M +
Sbjct: 194 ITNGLCKVGHSSAALSYLKKMEEKNCN-LDVTAYSGVVDGLCKDGMVFEALNLFSQMTGK 252
Query: 278 GIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP------------------------- 312
GI+ D T + +I+GL R +EA ++ + +
Sbjct: 253 GIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFFKTGMISRA 312
Query: 313 --------------DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
D+ Y +I L + ++A +VF MI +GC P + TY L+ G
Sbjct: 313 KSIFSFMVHMGIEHDVVTYTSIIGAHCMLNQMKDAMEVFDLMISKGCLPNIVTYTSLIHG 372
Query: 359 ------------HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
LG+ G DP V + +GG+ KAGK + AAK + VM++ ++P
Sbjct: 373 WCETKNMNKAMYFLGEMVNNGLDPNVVTWSTLIGGVCKAGKPV-AAKELFLVMHKHGQLP 431
Query: 407 RF 408
Sbjct: 432 NL 433
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 148/357 (41%), Gaps = 23/357 (6%)
Query: 75 ITFNRMVDIIGKSRNIDL---FWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFF 131
+TFN +V+ + N+ F + L++MG + T L +V +++
Sbjct: 154 VTFNTIVNGLCVEGNVAQAIRFVDHLKDMGYES--DSYTCGAITNGLCKVGHSSAALSYL 211
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDV 190
M + C + + VV LC+ +V EA L +++ + I+P+ Y LI G C+
Sbjct: 212 KKMEEKNCNLDVTAYSGVVDGLCKDGMVFEALNLFSQMTGKGIQPDLFTYNCLIHGLCNF 271
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
EA+ + M +G P + + + FFK A +F M V + + T
Sbjct: 272 DRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFFKTGMISRAKSIFSFM-VHMGIEHDVVT 330
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y +I C ++ A + + M +G + +T +S+I+G + +A + E+
Sbjct: 331 YTSIIGAHCMLNQMKDAMEVFDLMISKGCLPNIVTYTSLIHGWCETKNMNKAMYFLGEMV 390
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK 366
P++ + LI G+ + + A ++F M K G P + T ++L G
Sbjct: 391 NNGLDPNVVTWSTLIGGVCKAGKPVAAKELFLVMHKHGQLPNLQTCAIILDGLFKCNFHS 450
Query: 367 GPDPL------------VNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
L + I + G+ +GK DA + + ++GV++ YN
Sbjct: 451 EAMSLFRELEKMNWDLNIIIYNIILDGMCSSGKLNDALELFSYLSSKGVKIDVVTYN 507
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 120/230 (52%), Gaps = 8/230 (3%)
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIA 179
+ ++K + F +M GC ++ ++ C+ K + +A Y + ++ + + PN +
Sbjct: 341 LNQMKDAMEVFDLMISKGCLPNIVTYTSLIHGWCETKNMNKAMYFLGEMVNNGLDPNVVT 400
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
+ LI G C G + A +++ +M G P++ +++ FK N EAM +F+
Sbjct: 401 WSTLIGGVCKAGKPVAAKELFLVMHKHGQLPNLQTCAIILDGLFKCNFHSEAMSLFR--E 458
Query: 240 VKRMD-DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR 298
+++M+ DL + Y I++D MC GK++ A + + +G++ D +T + +I GL G
Sbjct: 459 LEKMNWDLNIIIYNIILDGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMIKGLCKEGL 518
Query: 299 LREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
L +A ++ ++E+ P+ Y+ ++GLLR + ++T+ M +G
Sbjct: 519 LDDAEDLLMKMEENGCPPNECTYNVFVQGLLRRYQISKSTKYLMFMKDKG 568
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 140/325 (43%), Gaps = 32/325 (9%)
Query: 53 WRPVYLFFQYTQKA-QP------CFAHNSITFNRMVDIIGKSRNIDLFWE----TLQEMG 101
+ + LF Q T K QP C H F+R W+ L M
Sbjct: 240 FEALNLFSQMTGKGIQPDLFTYNCLIHGLCNFDR--------------WKEAAPLLANMM 285
Query: 102 RRRLVND-KTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVV 160
R+ ++ D +TF + + + + + F M G E+ + ++ C +
Sbjct: 286 RKGIMPDVQTFNVIAGRFFKTGMISRAKSIFSFMVHMGIEHDVVTYTSIIGAHCMLNQMK 345
Query: 161 EAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMI 219
+A + L +S+ PN + Y LI G+C+ ++ +A M + G +P++ +I
Sbjct: 346 DAMEVFDLMISKGCLPNIVTYTSLIHGWCETKNMNKAMYFLGEMVNNGLDPNVVTWSTLI 405
Query: 220 ETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGI 279
K K A ++F +M K L T I++D + K S+A ++ E+ K
Sbjct: 406 GGVCKAGKPVAAKELFLVMH-KHGQLPNLQTCAIILDGLFKCNFHSEAMSLFRELEKMNW 464
Query: 280 EADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQ 335
+ + + + I+ G+ + G+L +A ++ + K D+ Y+ +IKGL + +A
Sbjct: 465 DLNIIIYNIILDGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMIKGLCKEGLLDDAED 524
Query: 336 VFREMIKRGCEPTMHTYIMLLQGHL 360
+ +M + GC P TY + +QG L
Sbjct: 525 LLMKMEENGCPPNECTYNVFVQGLL 549
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 78/188 (41%), Gaps = 31/188 (16%)
Query: 240 VKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
+K M +G+ T IVI+ +C+ +++L MFK G+E +T ++I+ GL
Sbjct: 106 IKHMSYIGVKPTVHTLNIVINCLCRLSHAVFGFSVLGLMFKIGVEPSIVTFNTIVNGLCV 165
Query: 296 RGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
G + +A + V+ ++ + D + GL ++ + A ++M ++ C +
Sbjct: 166 EGNVAQAIRFVDHLKDMGYESDSYTCGAITNGLCKVGHSSAALSYLKKMEEKNCNLDVTA 225
Query: 352 YIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
Y + V GL K G +A ++ +G++ F YN
Sbjct: 226 Y-----------------------SGVVDGLCKDGMVFEALNLFSQMTGKGIQPDLFTYN 262
Query: 412 KFLHYYSN 419
+H N
Sbjct: 263 CLIHGLCN 270
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 58/114 (50%), Gaps = 2/114 (1%)
Query: 123 ELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYG 181
+L + F ++ G + + N ++K LC+ L+ +A+ L++K+ E PNE Y
Sbjct: 483 KLNDALELFSYLSSKGVKIDVVTYNIMIKGLCKEGLLDDAEDLLMKMEENGCPPNECTYN 542
Query: 182 WLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
++G + +++K M D+GF+ K + +F NK++ A++VF
Sbjct: 543 VFVQGLLRRYQISKSTKYLMFMKDKGFQADA-TTTKFLINYFSANKENRALEVF 595
>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
Length = 628
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 131/288 (45%), Gaps = 22/288 (7%)
Query: 142 SLEMLNKVVKTLCQRKLVVEAKYLILKLSE----WIKPNEIAYGWLIKGYCDVGDLIEAS 197
S E+ N ++ +C+ K + + L ++ + PN Y ++ C L EA
Sbjct: 300 SAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQ 359
Query: 198 KIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDW 257
++ N M + G P + +++ K+ K D A + + M + + + I ++
Sbjct: 360 ELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASI-LNA 418
Query: 258 MCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA----YKVVEEIEKPD 313
+ K GK+ A + LE M RG D +T ++++ GL GR+ EA K+V PD
Sbjct: 419 LSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPD 478
Query: 314 ISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG-----------HLGK 362
+ Y +I L R +A A +F+EM+KRG P Y LL G L K
Sbjct: 479 VFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLK 538
Query: 363 RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY 410
PD +++ + V GL KAGK+ DA + VER+ + G F Y
Sbjct: 539 TSLCKPDFVMH--KMVVDGLCKAGKAEDACEVVERMADAGFPADAFTY 584
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 96/421 (22%), Positives = 167/421 (39%), Gaps = 73/421 (17%)
Query: 67 QPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELK 125
Q + H+ T+N +D + K+ L +E Q+M RR +D T+ I L L + EL
Sbjct: 31 QKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELD 90
Query: 126 K----------------MVNFFHIMNDC--------------------GCEYSLEMLNKV 149
K ++ + +++ C GC + N +
Sbjct: 91 KAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSL 150
Query: 150 VKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGF 208
+K LC + + EA L +++ +PN I+Y L+ G C G L EA ++W M ++
Sbjct: 151 LKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSC 210
Query: 209 EPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK--RMDDLGLSTY--------------R 252
P + + K N+ EA + M K + D + ST
Sbjct: 211 VPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQN 270
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK- 311
+I+ +C+ G + +A EEM R +++I+ + RL + + + ++
Sbjct: 271 QMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSM 330
Query: 312 ------PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG--HLGKR 363
P++ Y+ ++ L + ++ EA ++ EM G P + TY L+ G LGK
Sbjct: 331 KEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKL 390
Query: 364 GR----------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
R +G P D + L KAGK A ++E + RG YN
Sbjct: 391 DRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTL 450
Query: 414 L 414
L
Sbjct: 451 L 451
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 145/335 (43%), Gaps = 44/335 (13%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALMTLAEVRELKKMVN 129
H N+M++ + +S +D +T +EM R + + F + + + + L V
Sbjct: 263 GHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVL 322
Query: 130 FFH---IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIK 185
F M + C +LE N +V LC+ K + EA+ L+ +++ + + P+ + Y L+
Sbjct: 323 LFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVD 382
Query: 186 GYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD 245
G C +G L A + M+ EG P ++ K K D A+ + M+ R
Sbjct: 383 GLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKA-RGST 441
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTML---------------------------------- 271
L TY ++D +CK G+I +A T L
Sbjct: 442 PDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAI 501
Query: 272 -EEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE-EIEKPDISLYHGLIKGLLRLRR 329
+EM KRG+ D + S++ GL G A ++++ + KPD ++ ++ GL + +
Sbjct: 502 FQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCKPDFVMHKMVVDGLCKAGK 561
Query: 330 AREATQVFREMIKRGCEPTMHTYIMLLQG--HLGK 362
A +A +V M G TYI +++G LGK
Sbjct: 562 AEDACEVVERMADAGFPADAFTYINVVRGLRKLGK 596
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 161/383 (42%), Gaps = 48/383 (12%)
Query: 56 VYLFFQYTQKA--QPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKI 113
++ F+Y KA +P N I+++ ++D + K+ +D +EM + V D
Sbjct: 163 AFVLFEYMAKAGCEP----NVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYT 218
Query: 114 ALMT-LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW 172
+ +T L + + + + M G + + V+ LC++ EA+
Sbjct: 219 SFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQ--------- 269
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
+I+ C G L EA K + M PS ++ + +I K + + +
Sbjct: 270 --------NQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGV 321
Query: 233 KVFQMMRVKRMDDL----GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
+FQ R+K M + L TY I++D +CK ++ +A ++ EM G+ D +T S+
Sbjct: 322 LLFQ--RMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSA 379
Query: 289 IIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
++ GL G+L A ++EE+ K PD ++ L + + A M RG
Sbjct: 380 LVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARG 439
Query: 345 CEPTMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDA 391
P + TY LL G L K GR P V TI + L ++G++ A
Sbjct: 440 STPDLVTYNTLLDG-LCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGA 498
Query: 392 AKYVERVMNRGVEVPRFDYNKFL 414
+ ++ RGV Y+ L
Sbjct: 499 HAIFQEMVKRGVLPDTVLYHSLL 521
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 132/269 (49%), Gaps = 15/269 (5%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P++ Y +++G C G+L +A ++ + + G + ++ +I+ K ++ D+A+++
Sbjct: 71 PDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEI 130
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
F+ M + T+ ++ +C ++S+A+ + E M K G E + ++ S+++ GL
Sbjct: 131 FKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLC 190
Query: 295 ARGRLREAYKVVEE-IEK---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
GRL EA ++ EE +EK PD+ Y + GL + R EA R+M+ +G +
Sbjct: 191 KAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAV 250
Query: 351 TYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY 410
+ ++ G L K+G + L ++G +A K E +++R +
Sbjct: 251 AFSTVI-GILCKKGHAE-----EAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELF 304
Query: 411 NKFLHYYSNE----EGVVMFEEVGKKLRE 435
N +H +GV++F+ + K ++E
Sbjct: 305 NTLIHAVCKSKRLPDGVLLFQRM-KSMKE 332
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 109/244 (44%), Gaps = 6/244 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+T++ +VD + K +D + L+EM + + D T L L++ ++ ++
Sbjct: 375 VTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLET 434
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGD 192
M G L N ++ LC+ + EA + K+ + P+ +Y +I C G
Sbjct: 435 MKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQ 494
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
A I+ M G P + +++ + +D A+++ + K ++
Sbjct: 495 AAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCKP----DFVMHK 550
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP 312
+V+D +CK GK A ++E M G AD T +++ GL G++ +A ++V++ +
Sbjct: 551 MVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKARQLVDDASET 610
Query: 313 DISL 316
S+
Sbjct: 611 HTSV 614
>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 155/350 (44%), Gaps = 20/350 (5%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+++N M+ K+ N E +M +R L DK T+ + ++ +
Sbjct: 261 VSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQE 320
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M + G E + V+ LC+ VE + +++ K N Y LI Y G+
Sbjct: 321 MEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGN 380
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ EA ++ M EGFEP ++ K + DEA++ F+ + + + Y
Sbjct: 381 VNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVA-VNAMFYS 439
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP 312
+ID + K G++ +A EEM +RG D+ +++I L G++ EA + + +EK
Sbjct: 440 SLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKE 499
Query: 313 D----ISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL--GKRGRK 366
+ Y LI GL + R EA +++ MI +G PT ++ L G GK R
Sbjct: 500 GCDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKGITPTTASFRALSVGLCLSGKVARA 559
Query: 367 ----------GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
G P F+ + + L KAG++ A K + +++RG EVP
Sbjct: 560 CKILDELAPMGVIPETAFEDM-INVLCKAGRTEQACKLADGIVDRGREVP 608
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 101/441 (22%), Positives = 183/441 (41%), Gaps = 67/441 (15%)
Query: 23 ESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRP--VYLFFQYTQKAQPCFAHNSITFNRM 80
ES L S S L+ F + + + +P + FF + K Q + H + +
Sbjct: 103 ESNLDSYCSKFLIKLSPNFVAFVLKSDAIRGKPDIAFRFFWWAGK-QKNYIHKIECYVSL 161
Query: 81 VDIIGKSRNID----LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMND 136
+D++ S + D +F E ++ + + + L V EL + + M +
Sbjct: 162 IDVLSLSSDFDRVRCIFGEFKEKGFLMTVFAANSLIRSFGALGMVEEL---LWVWRRMKE 218
Query: 137 CGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW--IKPNEIAYGWLIKGYCDVGDLI 194
G E SL N ++ L + +E+ + ++ E I P+ ++Y +IKGYC G+
Sbjct: 219 SGIEPSLYTFNFLLNGLVN-SMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTK 277
Query: 195 EASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIV 254
+A + + M EP +I+ + D + ++Q M +R ++ Y +V
Sbjct: 278 KAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEME-ERGLEIPPHAYSLV 336
Query: 255 IDWMCKRGK-----------------------------------ISQAYTMLEEMFKRGI 279
I +CK G+ +++A + E M G
Sbjct: 337 IGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGF 396
Query: 280 EADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISL----YHGLIKGLLRLRRAREATQ 335
E D++T I+ GL GRL EA + E + ++++ Y LI GL + R EA +
Sbjct: 397 EPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEK 456
Query: 336 VFREMIKRGCEPTMHTYIMLLQGHLGKRG-------------RKGPDPLVNFDTIFVGGL 382
F EM++RGC + Y L+ L K G ++G D V TI + GL
Sbjct: 457 FFEEMVERGCPQDSYCYNALIDA-LAKSGKMEEALVLFKRMEKEGCDQTVYTYTILISGL 515
Query: 383 VKAGKSLDAAKYVERVMNRGV 403
K ++ +A K + ++++G+
Sbjct: 516 FKEHRNEEALKLWDLMIDKGI 536
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 87/218 (39%), Gaps = 37/218 (16%)
Query: 262 GKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLY 317
G + + + M + GIE T + ++ GL+ + A +V E +E PD+ Y
Sbjct: 204 GMVEELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVVSY 263
Query: 318 HGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTI 377
+ +IKG + ++A + F +M KR EP TY+ L+Q + NFD+
Sbjct: 264 NTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEG---------NFDSC 314
Query: 378 FVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE----EGVVMFEEVGKKL 433
+ + RG+E+P Y+ + + EG +FE + KK
Sbjct: 315 L--------------HLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKG 360
Query: 434 REVGLADLADIFQRYGKKMATR------ERRRNRAIEP 465
+ +A + YGK ER + EP
Sbjct: 361 CKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEP 398
>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
Length = 836
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 148/349 (42%), Gaps = 30/349 (8%)
Query: 109 KTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK 168
KT L +L + ELKK + + G + + + ++ C+ +A L K
Sbjct: 222 KTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDAIGLFSK 281
Query: 169 LSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINK 227
+ + + PN + Y +I G C G L EA + M E PS+ I K+ K
Sbjct: 282 MEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEK 341
Query: 228 DDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADN 283
DEA V +K M +LG Y +ID CK G IS+A + ++M +GI ++
Sbjct: 342 IDEANCV-----LKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNS 396
Query: 284 LTLSSIIYGLLARGRLREAYKVVEEIEKPDISLYHG----LIKGLLRLRRAREATQVFRE 339
+TL+S+I G ++ +A V+EE+ + + G +I L R A RE
Sbjct: 397 VTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIRE 456
Query: 340 MIKRGCEPTMHTYIMLLQG--HLGKRGR----------KGPDPLVNFDTIFVGGLVKAGK 387
M+ R P L+ G GK+G KG P + + GL KAG
Sbjct: 457 MLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGN 516
Query: 388 SLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE----EGVVMFEEVGKK 432
+ K + ++ RG+ R YN + E EG + EE+ KK
Sbjct: 517 MQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKK 565
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 127/268 (47%), Gaps = 29/268 (10%)
Query: 161 EAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMI 219
EA ++ ++SE PNE+ Y LI GYC +G++ EA KI + M +G P+ ++ +I
Sbjct: 344 EANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLI 403
Query: 220 ETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGI 279
+ F K ++ +A V + M + R + ++ +VI+W+C + + A + EM R +
Sbjct: 404 QGFCKSDQIGQAENVLEEM-IGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNL 462
Query: 280 EADNLTLSSIIYGLLARGRLREAY----KVVEEIEKPDISLYHGLIKGLLRLRRAREATQ 335
++ L++++ GL G+ EA +++ + P+I + LI GL + +E +
Sbjct: 463 RPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLK 522
Query: 336 VFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYV 395
+ R+M++RG TY + G K GK + +
Sbjct: 523 LLRDMLERGLVFDRITY-----------------------NTLISGCCKEGKVKEGFELK 559
Query: 396 ERVMNRGVEVPRFDYNKFLHYYSNEEGV 423
E ++ +G++ + +N LH N + +
Sbjct: 560 EEMVKKGIQPDIYTFNLLLHGLCNADKI 587
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 132/296 (44%), Gaps = 7/296 (2%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMV 128
F N + +N ++D K NI + +M + + N T + + ++ +
Sbjct: 357 FVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAE 416
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGY 187
N M G + + V+ LC + V A + I + L ++PN+ L+ G
Sbjct: 417 NVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGL 476
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C G EA ++W + +GF P+I + +I K E +K+ + M ++R
Sbjct: 477 CKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDM-LERGLVFD 535
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
TY +I CK GK+ + + + EEM K+GI+ D T + +++GL ++ EA ++
Sbjct: 536 RITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWH 595
Query: 308 EIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
E +K P++ Y +I G + + E + E++ + E Y L++ +
Sbjct: 596 ECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAY 651
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 131/296 (44%), Gaps = 22/296 (7%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N ++ LC+ + E L+ + E + + I Y LI G C G + E ++ M
Sbjct: 505 NALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVK 564
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKIS 265
+G +P I + ++ +K DEA +++ + K + TY ++ID CK K+
Sbjct: 565 KGIQPDIYTFNLLLHGLCNADKIDEASRLWHECK-KNGYVPNVYTYGVMIDGYCKANKVE 623
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISL----YHGLI 321
+ +L E+ + +E +++ +S+I G + A+++ ++++ + L Y L+
Sbjct: 624 EGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLM 683
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH--LGKRGRKG------------ 367
GL + +A + EM K G P + Y ++ G+ LG+ +
Sbjct: 684 HGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIH 743
Query: 368 PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGV 423
P+ TI + G K GK+ +AAK + + +G+ YN F + E V
Sbjct: 744 PNKFTY--TIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKV 797
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 103/218 (47%), Gaps = 28/218 (12%)
Query: 149 VVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGF 208
V L ++ L K LS +K NE+ + ++++ + G
Sbjct: 208 VFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSY---------------EVYDFICLGGI 252
Query: 209 EPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKI 264
P + + MI F K +++D+A+ +F +M+ LG++ TY +I +CK G++
Sbjct: 253 IPDVHLFSTMINAFCKGHREDDAIGLFS-----KMEKLGVAPNVVTYNNIIHGLCKSGRL 307
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGL 320
+AY E+M K + +T S I GL+ ++ EA V++E+ + P+ +Y+ L
Sbjct: 308 DEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTL 367
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
I G ++ EA ++ +M+ +G P T L+QG
Sbjct: 368 IDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQG 405
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 113/239 (47%), Gaps = 21/239 (8%)
Query: 196 ASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM-DDLGLSTYRIV 254
A+ +++L+ +G PS+ ++ + K N+ ++ +V+ + + + D+ L + +
Sbjct: 205 AADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHL--FSTM 262
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY----KVVEEIE 310
I+ CK + A + +M K G+ + +T ++II+GL GRL EAY K+V+E
Sbjct: 263 INAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKV 322
Query: 311 KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR----- 365
P + Y I GL++L + EA V +EM + G P Y L+ G+ K G
Sbjct: 323 SPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYC-KMGNISEAL 381
Query: 366 --------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHY 416
KG P + G K+ + A +E ++ RG+ + + ++ +++
Sbjct: 382 KIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINW 440
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 5/149 (3%)
Query: 179 AYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
Y L+ G C++G + +A + + M EG P++ +I + K+ + ++ V Q M
Sbjct: 678 TYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEM 737
Query: 239 RVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR 298
+ TY I+ID CK GK +A +L EM ++GI D +T ++ GL G+
Sbjct: 738 SSHNIHPNKF-TYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGK 796
Query: 299 LREAYKVVEEIEKPDISL----YHGLIKG 323
+ EA+KV +E+ + L Y LI G
Sbjct: 797 VEEAFKVCDEMSSGAVCLDEITYTTLIDG 825
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 52/123 (42%), Gaps = 36/123 (29%)
Query: 170 SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD 229
S I PN+ Y +I G+C +G EA+K+ N MT++G P D V
Sbjct: 739 SHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILP--DAV-------------- 782
Query: 230 EAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSI 289
TY + +CK GK+ +A+ + +EM + D +T +++
Sbjct: 783 --------------------TYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTL 822
Query: 290 IYG 292
I G
Sbjct: 823 IDG 825
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 171/363 (47%), Gaps = 41/363 (11%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMT 117
FF +K + C N +T+N ++D K R ID +E L+ M + L N ++ + +
Sbjct: 227 FFDRMEK-KGCLP-NVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVING 284
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEML--NKVVKTLCQ-----RKLVVEAKYLILKLS 170
L +K++ MN G YSL+ + N ++K C+ + LV+ A+ L LS
Sbjct: 285 LCREGRMKEISFVLTEMNKRG--YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLS 342
Query: 171 EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDE 230
P+ I Y LI C G++ A++ + M G P+ +++ F + +E
Sbjct: 343 ----PSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNE 398
Query: 231 AMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTL 286
A +V +K M D G S TY +I+ C GK+ A +LE+M ++G+ D ++
Sbjct: 399 AYRV-----LKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSY 453
Query: 287 SSIIYGLLARGRLREAYKV----VEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIK 342
S+++ G + EA +V V + KPD Y LI+G RR +EA +F EM++
Sbjct: 454 STVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLR 513
Query: 343 RGCEPTMHTYIML-----LQGHLGKRGR-------KGPDPLVNFDTIFVGGLVKAGKSLD 390
G P TY L ++G L K + KG P V ++ + GL K ++ +
Sbjct: 514 VGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTRE 573
Query: 391 AAK 393
A +
Sbjct: 574 AKR 576
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 163/395 (41%), Gaps = 31/395 (7%)
Query: 39 HEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQ 98
H+FF C L + ++ Q A ++ + L + +LQ
Sbjct: 75 HQFFTLRCKCITLHILTRFKLYKTAQTLAEDVAAKTL----------DDEDASLVFRSLQ 124
Query: 99 EMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKL 158
E F + + + + + + K ++ H+ G + N V+ + K
Sbjct: 125 ETYDLCNSTSSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKR 184
Query: 159 VVEAKYLILK--LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVD 216
+ + K L + PN Y LI+G+C G+L A + ++ M +G P++ +
Sbjct: 185 NISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYN 244
Query: 217 KMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFK 276
+I+ + K+ K D+ ++ + M +K ++ L +Y +VI+ +C+ G++ + +L EM K
Sbjct: 245 TLIDGYCKLRKIDDGFELLRSMALKGLEP-NLISYNVVINGLCREGRMKEISFVLTEMNK 303
Query: 277 RGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRARE 332
RG D +T +++I G G +A + E+ + P + Y LI + +
Sbjct: 304 RGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNR 363
Query: 333 ATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG-------------RKGPDPLVNFDTIFV 379
AT+ +M RG P TY L+ G ++G G P V +
Sbjct: 364 ATEFLDQMRVRGLCPNERTYTTLVDG-FSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALI 422
Query: 380 GGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
G AGK +DA +E + +G+ Y+ L
Sbjct: 423 NGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVL 457
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 143/308 (46%), Gaps = 26/308 (8%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHI 133
IT+ ++ + K+ N++ E L +M R L N++T+ + ++ + +
Sbjct: 346 ITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKE 405
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M D G S+ N ++ C +V+A ++ + E + P+ ++Y ++ G+C D
Sbjct: 406 MIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYD 465
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLSTY 251
+ EA ++ M +G +P +I+ F + + EA +F +M+RV D TY
Sbjct: 466 VDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDE--FTY 523
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV----- 306
+I+ C G + +A + EM ++G+ D +T S +I GL + R REA +++
Sbjct: 524 TALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFY 583
Query: 307 EEIEKPDISLYH---------------GLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
EE D++ YH LIKG EA QVF M+++ +P
Sbjct: 584 EESVPSDVT-YHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTA 642
Query: 352 YIMLLQGH 359
Y +++ GH
Sbjct: 643 YNVMIHGH 650
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 98/219 (44%), Gaps = 20/219 (9%)
Query: 147 NKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
+ +++ C+++ EA L + L + P+E Y LI YC GDL +A ++ N M +
Sbjct: 489 SSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVE 548
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEA----MKVFQMMRV----------KRMDDLGLSTY 251
+G P + +I K + EA +K+F V + ++ +
Sbjct: 549 KGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSV 608
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK 311
+I C +G +++A + E M ++ + D + +I+G G +R+AY + +E+ K
Sbjct: 609 VSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVK 668
Query: 312 PDISLYH----GLIKGLLRLRRAREATQVFREMIKRGCE 346
L+ L+K L + + E V ++ R CE
Sbjct: 669 SGFLLHTVTVIALVKTLHKEGKVNELNSVIANVL-RSCE 706
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 161/343 (46%), Gaps = 16/343 (4%)
Query: 19 QYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFN 78
+++ E + +L S NF + E FL + N+ ++W +T+ A + T+N
Sbjct: 779 RFTKELGVKPTLESYNFLI--EGFLGVHND-EMAWN------LFTEMKNAGCAPDVFTYN 829
Query: 79 RMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIMNDC 137
++D GKS I+ +E ++M N T I + L + L K ++ F+ +
Sbjct: 830 LLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSG 889
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEA 196
+ ++ L + + EAK L ++ ++ +PN Y LI G+ GD+ A
Sbjct: 890 DFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTA 949
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVID 256
+++ M EG P + ++ + + D+A+ F+ ++ + L Y ++ID
Sbjct: 950 CELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLY-LDSIAYNLMID 1008
Query: 257 WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KP 312
+ + +I +A T+ +EM RGI D T +S+I L G + +A K+ EE++ +P
Sbjct: 1009 GLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEP 1068
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
++ Y+ LI+G + A V++ M+ GC P T+ L
Sbjct: 1069 NVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQL 1111
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 105/439 (23%), Positives = 180/439 (41%), Gaps = 72/439 (16%)
Query: 54 RPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFK 112
R + LF T P N+ITFN ++D + K+ +DL + L +M + D TF
Sbjct: 597 RAMELFASMTGNGCP---PNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFN 653
Query: 113 IALMTLAEVRELKKMVNFFHIMNDC---GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
+ L + + + FH M C +L VVK A+ + +L
Sbjct: 654 TIIHGLVIEKRVSDAIWLFHQMKKMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRL 713
Query: 170 SEWI-----------------KPNEIAYG----------------WLIKGYCDVGDLIEA 196
++ I +G +IK C + A
Sbjct: 714 GVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVA 773
Query: 197 SKIWNLMTDE-GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TY 251
++ T E G +P+++ + +IE F ++ D+ A +F M+ + G + TY
Sbjct: 774 QSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMK-----NAGCAPDVFTY 828
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA----YKVVE 307
+++D K GKI++ + + E+M + + +T + II L+ L +A Y +V
Sbjct: 829 NLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVS 888
Query: 308 EIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG--- 364
P Y L+ GLL+ R EA ++F EM+ GC P Y +L+ G GK G
Sbjct: 889 GDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILING-FGKTGDVN 947
Query: 365 ----------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
R+G P + T VG L +AG+ DA Y E++ G+ + YN +
Sbjct: 948 TACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMI 1007
Query: 415 ----HYYSNEEGVVMFEEV 429
+ EE + +++E+
Sbjct: 1008 DGLGRSHRIEEALTLYDEM 1026
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 130/299 (43%), Gaps = 20/299 (6%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEA 196
G + SL+ + ++ +R+ K L+ ++ S +KPN Y I+ G + EA
Sbjct: 224 GLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEA 283
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVID 256
+I M D+G P + +I+ K D+AM++F M+ TY ++D
Sbjct: 284 CRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKP-DRVTYITMLD 342
Query: 257 WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----P 312
G + + EM G D +T + ++ L G + EA+ +++ + K P
Sbjct: 343 KFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLP 402
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR------- 365
++ Y+ LI GLLR+ R +A +F M G PT +TYI+ + + GK GR
Sbjct: 403 NLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFY-GKSGRSDKALET 461
Query: 366 ------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYS 418
+G P + + L + G+ +A R+ + G+ YN + YS
Sbjct: 462 FEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYS 520
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 149/334 (44%), Gaps = 51/334 (15%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRR-LVNDKTFKIALMTLAEVRELKKMV 128
+A + ITF +V+ + K+ NID + L M ++ L N T+ + L V L +
Sbjct: 365 YAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDAL 424
Query: 129 NFFHIMNDCG--------------------CEYSLEMLNKV---------------VKTL 153
+ F+ M G + +LE K+ + +L
Sbjct: 425 DLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSL 484
Query: 154 CQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSI 212
+ + EAK + +L S + P+ + Y ++K Y G + EA ++ + M++ EP I
Sbjct: 485 AEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDI 544
Query: 213 DVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAY 268
V++ +I T +K + DEA K+F R+ D+ L+ TY +I + K G++ +A
Sbjct: 545 IVINSLINTLYKAGRVDEAWKMFC-----RLKDMKLAPTVVTYNTLIAGLGKEGQVQRAM 599
Query: 269 TMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGL 324
+ M G + +T ++I+ L + A K++ ++ PD+ ++ +I GL
Sbjct: 600 ELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGL 659
Query: 325 LRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+ +R +A +F +M K+ P T LL G
Sbjct: 660 VIEKRVSDAIWLFHQM-KKMLTPDCVTLCTLLPG 692
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 117/280 (41%), Gaps = 42/280 (15%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIM 134
TF+ ++ GK R+ + L+EM L N T+ I + L + + M
Sbjct: 231 TFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRM 290
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDL 193
D GC + ++ LC + +A L +K+ + KP+ + Y ++ + D GDL
Sbjct: 291 EDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDL 350
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
+ W+ M +G+ P DV+ T+ I
Sbjct: 351 GRVKEFWSEMEADGYAP--DVI----------------------------------TFTI 374
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK-- 311
+++ +CK G I +A+ +L+ M K+G+ + T +++I GLL RL +A + +E
Sbjct: 375 LVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLG 434
Query: 312 --PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
P Y I + R+ +A + F +M RG P +
Sbjct: 435 VVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNI 474
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 126/299 (42%), Gaps = 37/299 (12%)
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGY 187
N F M + GC + N ++ + + E L ++ KPN I + +I
Sbjct: 811 NLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANL 870
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
L +A ++ + F P+ +++ K + +EA ++F+ M D G
Sbjct: 871 VKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFE-----EMVDYG 925
Query: 248 L----STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
+ Y I+I+ K G ++ A + + M + GI D + +S++ L GR+ +A
Sbjct: 926 CRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDAL 985
Query: 304 KVVEEIEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
E++++ + L Y+ +I GL R R EA ++ EM RG P + TY L+ +
Sbjct: 986 HYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLIL-N 1044
Query: 360 LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYS 418
LG V G+V+ A K E + G+E F YN + YS
Sbjct: 1045 LG-----------------VAGMVE-----QAGKLYEELQFIGLEPNVFTYNALIRGYS 1081
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 78/412 (18%), Positives = 157/412 (38%), Gaps = 68/412 (16%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALMTLAEVRELKKMV 128
A +T+N ++ +GK + E M G N TF L L + E+ +
Sbjct: 575 LAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLAL 634
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYC 188
+ M C + N ++ L K V +A +L ++ + + P+ + L+ G
Sbjct: 635 KMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKMLTPDCVTLCTLLPGVV 694
Query: 189 DVGDLIEASKI----------------W-----NLMTDEGFEPSIDVVDKMIETFFKINK 227
G + +A KI W ++T G E +I D+++ ++ K
Sbjct: 695 KNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCG--RVCK 752
Query: 228 DDEAMK-------------VFQMMRVKRMDDLG----LSTYRIVIDWMCKRGKISQAYTM 270
D + V Q + ++ +LG L +Y +I+ A+ +
Sbjct: 753 DGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNL 812
Query: 271 LEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLR 326
EM G D T + ++ G++ E +++ E++ KP+ ++ +I L++
Sbjct: 813 FTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVK 872
Query: 327 LRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAG 386
+A +F +++ PT TY GP + GL+K+G
Sbjct: 873 SNSLDKALDLFYDLVSGDFSPTPCTY--------------GP---------LLDGLLKSG 909
Query: 387 KSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
+ +A + E +++ G YN ++ + V E+ K++ G+
Sbjct: 910 RLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGI 961
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 96/229 (41%), Gaps = 25/229 (10%)
Query: 211 SIDVVDKMIETFFKINKDDEAMKVFQMMR---VKRMDDLGLSTYRIVIDWMCKRGKISQA 267
+ + + M+E + + + VF +M+ +KR L+TY I+ + RG + Q
Sbjct: 123 TTETCNHMLEILRIHRRVGDMVVVFNLMQNQIIKR----DLNTYLIIFKGLFIRGGLRQT 178
Query: 268 YTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY----KVVEEIEKPDISLYHGLIKG 323
+M + G + + + +I+ LL G REA ++V E KP + + L+
Sbjct: 179 PFAFGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVA 238
Query: 324 LLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR-------------KGPDP 370
+ R + EM G +P ++TY + ++ LG+ GR G P
Sbjct: 239 TGKRRDTETVKSLLEEMESLGLKPNIYTYTICIR-VLGRAGRIDEACRIMKRMEDDGCGP 297
Query: 371 LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN 419
V T+ + L AGK DA + ++ + R Y L +S+
Sbjct: 298 DVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSD 346
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 131/303 (43%), Gaps = 51/303 (16%)
Query: 149 VVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGF 208
++ LC+ V EA L+ K+ + P + Y LI G C EA + M G
Sbjct: 87 LIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGC 146
Query: 209 EPSIDVVDKMIETFFKINKDDEAMKVFQMM-----------------------RVKRMDD 245
P I +I F K K D+A++VF+ + R+K D
Sbjct: 147 IPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAID 206
Query: 246 L------------GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
L TY +I C+ GK+ +A +LE M + G D +T ++++ G
Sbjct: 207 LFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGF 266
Query: 294 LARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
RL +AY ++ ++ + PD+ + L+ GL R R +A + EM ++ C PT+
Sbjct: 267 CKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTV 326
Query: 350 HTYIMLLQGHLG----KRGRK-------GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERV 398
+TY +L G+ + RK P +V+F+ I + GL K +S +A + VE
Sbjct: 327 YTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFN-IMIRGLCKVNRSSEAMELVEEA 385
Query: 399 MNR 401
R
Sbjct: 386 RRR 388
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 123/283 (43%), Gaps = 20/283 (7%)
Query: 139 CEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEAS 197
C +++ LC+ K + +A + K+ S+ P+ Y +I C L EA
Sbjct: 7 CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66
Query: 198 KIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDW 257
K M + P++ +I+ K + DEA+ + MR K + TY +I
Sbjct: 67 KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPT--AVTYNSLISG 124
Query: 258 MCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPD 313
+CK + S+AY +LEEM G D T +++I G + +A +V E++ +PD
Sbjct: 125 LCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPD 184
Query: 314 ISLYHGLIKGLLRLRRAREATQVFREMIKRG-CEPTMHTYIMLLQGH------------L 360
+ Y LI GL + R +EA +F MIK G C P TY L+ G L
Sbjct: 185 VVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLL 244
Query: 361 GKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
+ G P V T + G K + DA + ++ +G+
Sbjct: 245 ERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGL 287
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 119/258 (46%), Gaps = 21/258 (8%)
Query: 178 IAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQM 237
+ Y LI+G C V L +A M +GF P + +I N+ EA K +
Sbjct: 12 VTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEE 71
Query: 238 MRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
M + + + TY ++ID +CK G++ +A +L +M K+ + +T +S+I GL
Sbjct: 72 MANRNLTP-NVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPT-AVTYNSLISGLCKAE 129
Query: 298 RLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYI 353
R EAY ++EE+ PDI Y LI G + +++ +A +VF +++ RG P + TY
Sbjct: 130 RASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYS 189
Query: 354 MLLQGHLGKRGR------------KGPDPLVNFDTI--FVGGLVKAGKSLDAAKYVERVM 399
L+ G L K GR K + N T + G + GK +A +ER+
Sbjct: 190 CLIDG-LCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248
Query: 400 NRGVEVPRFDYNKFLHYY 417
G Y ++ +
Sbjct: 249 ETGSSPDVVTYTTLMNGF 266
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 155/351 (44%), Gaps = 34/351 (9%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
N +T+ ++D + K +D L +M ++ + T+ + L + + +
Sbjct: 80 NVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLISGLCKAERASEAYDLLE 139
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVG 191
M GC + ++ C+ K +A + +L + +P+ + Y LI G C G
Sbjct: 140 EMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEG 199
Query: 192 DLIEASKIWNLMTDEG-FEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS- 249
L EA ++ M G P+ + +I F ++ K DEAM + + RM + G S
Sbjct: 200 RLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLE-----RMAETGSSP 254
Query: 250 ---TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
TY +++ CK ++ AY +L +M ++G+ D +T +S++ GL RL +A ++
Sbjct: 255 DVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHIL 314
Query: 307 EEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL-- 360
E+ + P + Y+ ++ G R + EA + E + C P + ++ ++++G
Sbjct: 315 GEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMD--CPPNVVSFNIMIRGLCKV 372
Query: 361 ------------GKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVM 399
+R R PD V T + GL + K +D A V R M
Sbjct: 373 NRSSEAMELVEEARRRRCNPD--VVMYTTVIDGLCRE-KKVDEACRVYRKM 420
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 137/327 (41%), Gaps = 22/327 (6%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T+ + L +V+ L++ + F M G + V+ LC + EA+ + ++
Sbjct: 13 TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEM 72
Query: 170 SEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
+ + PN + Y LI G C G + EA + + M + P+ + +I K +
Sbjct: 73 ANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERA 131
Query: 229 DEAMKVF-QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLS 287
EA + +M+ + D + TY +I CK K A + E++ RG D +T S
Sbjct: 132 SEAYDLLEEMVYSGCIPD--IFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYS 189
Query: 288 SIIYGLLARGRLREAYKVVEEIEK-----PDISLYHGLIKGLLRLRRAREATQVFREMIK 342
+I GL GRL+EA + + K P+ Y+ LI G R+ + EA + M +
Sbjct: 190 CLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAE 249
Query: 343 RGCEPTMHTYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLD 390
G P + TY L+ G L + RKG P V T + GL + + D
Sbjct: 250 TGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSD 309
Query: 391 AAKYVERVMNRGVEVPRFDYNKFLHYY 417
A + + + + YN L Y
Sbjct: 310 AVHILGEMRRKSCSPTVYTYNTILDGY 336
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 129/289 (44%), Gaps = 7/289 (2%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT- 117
F K+ C N++T+N ++ + +D L+ M D LM
Sbjct: 207 LFGRMIKSGSCMP-NTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNG 265
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPN 176
++ L + + M G + ++ LC+ + +A +++ ++ + P
Sbjct: 266 FCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPT 325
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
Y ++ GYC L EA K ++ + P++ + MI K+N+ EAM++ +
Sbjct: 326 VYTYNTILDGYCRANQLEEARKF--MLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVE 383
Query: 237 MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKR-GIEADNLTLSSIIYGLLA 295
R +R + + Y VID +C+ K+ +A + +M + G +++T S++I GL
Sbjct: 384 EARRRRCNP-DVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCN 442
Query: 296 RGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
G L A +E+ P+I Y+ LI + R +A ++ +M++RG
Sbjct: 443 AGMLDRARGYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491
>gi|15236834|ref|NP_194398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186944|ref|NP_001190849.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213515|sp|Q9SZ10.1|PP338_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g26680, mitochondrial; Flags: Precursor
gi|4455191|emb|CAB36514.1| putative protein [Arabidopsis thaliana]
gi|7269520|emb|CAB79523.1| putative protein [Arabidopsis thaliana]
gi|332659836|gb|AEE85236.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332659837|gb|AEE85237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 521
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 116/234 (49%), Gaps = 6/234 (2%)
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYC 188
F+ M C + LN V+ C+ + + L+ + + +++Y LI G+C
Sbjct: 225 FYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHC 284
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
+ G L A K+ N+M G +P++ + +I F + K EA KVF M+ +
Sbjct: 285 EKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAP-NT 343
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY +I+ ++G A+ E+M GI+ D LT +++I+GL + + R+A + V+E
Sbjct: 344 VTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKE 403
Query: 309 IEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
++K P+ S + LI G + A ++++ MI+ GC P T+ ML+
Sbjct: 404 LDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSA 457
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 90/184 (48%), Gaps = 5/184 (2%)
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
+ L K + + A+ + M D GF P+++ + + + + D A++ ++ MR
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
++ T +V+ C+ GK+ + +L++M + G A +++ +++I G +G L
Sbjct: 231 RCKISP-NPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLL 289
Query: 300 REAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
A K+ + K P++ ++ LI G R + +EA++VF EM P TY L
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTL 349
Query: 356 LQGH 359
+ G+
Sbjct: 350 INGY 353
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 111/278 (39%), Gaps = 15/278 (5%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
N T N ++ +S +D E LQ+M R D ++ + E L +
Sbjct: 237 NPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLK 296
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDV 190
++M G + ++ N ++ C+ + EA + ++ + PN + Y LI GY
Sbjct: 297 NMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQ 356
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL-- 248
GD A + + M G + I + +I F + K + K Q VK +D L
Sbjct: 357 GDHEMAFRFYEDMVCNGIQRDILTYNALI---FGLCKQAKTRKAAQF--VKELDKENLVP 411
Query: 249 --STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
ST+ +I C R + + + + M + G + T + ++ A +V+
Sbjct: 412 NSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVL 471
Query: 307 EEIEKPDISL----YHGLIKGLLRLRRAREATQVFREM 340
E+ + I L H + GL + + ++ +EM
Sbjct: 472 REMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEM 509
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 90/212 (42%), Gaps = 30/212 (14%)
Query: 214 VVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG-LSTYRIVIDWMCK---RGKISQAYT 269
V D + +TF + K A F M+ D G L T +M +G++ A
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMK-----DYGFLPTVESCNAYMSSLLGQGRVDIALR 224
Query: 270 MLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRR 329
EM + I + TL+ ++ G G+L + ++++++E R
Sbjct: 225 FYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDME-----------------RL 267
Query: 330 AREATQV-FREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKS 388
AT V + +I CE + + + L+ +GK G + P+ +V F+T+ + G +A K
Sbjct: 268 GFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQ-PN-VVTFNTL-IHGFCRAMKL 324
Query: 389 LDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE 420
+A+K + V YN ++ YS +
Sbjct: 325 QEASKVFGEMKAVNVAPNTVTYNTLINGYSQQ 356
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 149/359 (41%), Gaps = 53/359 (14%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHI 133
+T + M+D + K+ I + M R L N+ + + L + R++
Sbjct: 127 VTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKM--------- 177
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDL 193
DC +LEML ++ K C P+ I Y LI G C GD+
Sbjct: 178 --DC----ALEMLAQMKKAFCT-------------------PDTITYNVLIDGLCKSGDV 212
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
A ++ M + G +P + + +I F K D A + + TY
Sbjct: 213 EAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTA 272
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY----KVVEEI 309
++DW+ K KI +A ++E++ G T ++++ GL GRL EA K+V+
Sbjct: 273 IVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNG 332
Query: 310 EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR---- 365
PD+ Y LI GL + +R+ EA ++F+EM RG Y L++ L + G+
Sbjct: 333 CTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIR-ELLQTGKIPQA 391
Query: 366 ---------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
G P V + + GL KAG+ A + + + RG+ Y+ +H
Sbjct: 392 SSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIH 450
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 154/356 (43%), Gaps = 39/356 (10%)
Query: 73 NSITFNRMVDIIGKSRNIDL---FWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
++IT+N ++D + KS +++ F++ + E G + V T+ I + + +
Sbjct: 195 DTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDV--YTYNILISGFCKAGNTDAASH 252
Query: 130 FFH---IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIK 185
+N GC + +V L + K + EA L+ K++ P Y L+
Sbjct: 253 SLAQETTIN--GCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLN 310
Query: 186 GYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD 245
G C +G L EA + + D G P + +I+ K + EA K+F+ M ++ +
Sbjct: 311 GLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLA- 369
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
L Y +I + + GKI QA ++ + M G D +TLS++I GL GR+ A ++
Sbjct: 370 LDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRI 429
Query: 306 VEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG 361
+ +E P+ +Y LI GL + R+ A ++ +M K C P TY
Sbjct: 430 FKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITY--------- 480
Query: 362 KRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
I + GL K+G A + + ++ G + + YN + +
Sbjct: 481 --------------NILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGF 522
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 130/293 (44%), Gaps = 27/293 (9%)
Query: 161 EAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMI 219
EA L+ K++ P Y L+ G C +G L EA + + D G P + +I
Sbjct: 4 EAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLI 63
Query: 220 ETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGI 279
+ K + EA K+F+ M ++ + L Y +I + + GKI QA ++ + M G
Sbjct: 64 DGLGKEKRSFEAYKLFKEMALRGLA-LDTVCYTALIRELLQTGKIPQASSVYKTMTSHGC 122
Query: 280 EADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQ 335
D +TLS++I GL GR+ A ++ + +E P+ +Y LI GL + R+ A +
Sbjct: 123 VPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALE 182
Query: 336 VFREMIKRGCEPTMHTYIMLLQGHLGKRG-------------RKGPDPLVNFDTIFVGGL 382
+ +M K C P TY +L+ G L K G G P V I + G
Sbjct: 183 MLAQMKKAFCTPDTITYNVLIDG-LCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGF 241
Query: 383 VKAGKSLDAAKY--VERVMNRGVEVPRFDYNKFLHYYSN----EEGVVMFEEV 429
KAG + DAA + + G + Y + + + EE V + E++
Sbjct: 242 CKAGNT-DAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKI 293
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 127/311 (40%), Gaps = 44/311 (14%)
Query: 76 TFNRMVDIIGKSRNID---LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
T+ +VD + K++ I+ E + G + T+ L L ++ L++ ++
Sbjct: 269 TYTAIVDWLAKNKKIEEAVALMEKITANGCTPTI--ATYNALLNGLCKMGRLEEAIDLLR 326
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVG 191
+ D GC + ++ L + K EA L +++ + + + Y LI+ G
Sbjct: 327 KIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTG 386
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK---------- 241
+ +AS ++ MT G P + + MI+ K + A+++F+ M +
Sbjct: 387 KIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYS 446
Query: 242 ---------RMDDLGLS---------------TYRIVIDWMCKRGKISQAYTMLEEMFKR 277
R D L TY I+ID +CK G + A +EM +
Sbjct: 447 ALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEA 506
Query: 278 GIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREA 333
G + D T + +I G G A V +++ ++ Y LI GL + R+ +A
Sbjct: 507 GCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKA 566
Query: 334 TQVFREMIKRG 344
+ F+ M +RG
Sbjct: 567 SLYFQHMKERG 577
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 84/205 (40%), Gaps = 36/205 (17%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHI 133
+T + M+D + K+ I + M R L N+ + + L + R++
Sbjct: 408 VTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKM--------- 458
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDL 193
DC +LEML ++ K C P+ I Y LI G C GD+
Sbjct: 459 --DC----ALEMLAQMKKAFCT-------------------PDTITYNILIDGLCKSGDV 493
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
A ++ M + G +P + + +I F K D A VF M R + TY
Sbjct: 494 EAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRC-SANVVTYGA 552
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRG 278
+I +CKR ++++A + M +RG
Sbjct: 553 LISGLCKRRQLTKASLYFQHMKERG 577
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 298 RLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYI 353
++ EA ++E+I P I+ Y+ L+ GL ++ R EA + R+++ GC P + TY
Sbjct: 1 KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60
Query: 354 MLLQGHLGKRGRK 366
L+ G LGK R
Sbjct: 61 SLIDG-LGKEKRS 72
>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 947
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 123/257 (47%), Gaps = 39/257 (15%)
Query: 142 SLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLIEASKIW 200
S+E+ N ++ L + K E L+ ++ + + PN + YG LI G+CD G L +A +
Sbjct: 568 SIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAY 627
Query: 201 NLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM-------------RVKRMDDLG 247
M ++GF P++ + K++ + +++ + DEA + Q M R+ + DD
Sbjct: 628 FDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGN 687
Query: 248 LST---------------------YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTL 286
L + Y I I +CK GK+ A + + RG DN T
Sbjct: 688 LDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTY 747
Query: 287 SSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIK 342
++I+G A G + +A+ + +E+ K P+I Y+ LI GL + A ++F ++
Sbjct: 748 CTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHL 807
Query: 343 RGCEPTMHTYIMLLQGH 359
+G P + +Y +L+ G+
Sbjct: 808 KGLAPNVISYNILIDGY 824
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 160/364 (43%), Gaps = 32/364 (8%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEV 121
Y + + N +T N ++ + + + M +R + D+ L+ L
Sbjct: 417 YNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDL--- 473
Query: 122 RELKKMVNFFHIM---NDC---GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IK 174
L KM FF + ND G S N ++ C+ + ++EA+ ++ E +
Sbjct: 474 --LFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFE 531
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+ + Y LI GYC +G++ EA K+ M E PSI++ + +I FK K E M +
Sbjct: 532 PDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDL 591
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
M +K + + TY +I C G++ +A+T +M ++G + + S I+ L
Sbjct: 592 LSEMCLKGLSP-NVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLY 650
Query: 295 ARGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIM 354
GR+ EA +++++ D+ L HG RL +A + + + I + + ++ +
Sbjct: 651 RLGRIDEANMLLQKMVNLDVFLDHGYFD---RLHKADDG-NLDSQKIADTLDESSKSFSL 706
Query: 355 LLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
P+ +V I + GL K+GK DA K ++ RG F Y +
Sbjct: 707 -------------PNSVVY--NIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLI 751
Query: 415 HYYS 418
H YS
Sbjct: 752 HGYS 755
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 186/418 (44%), Gaps = 60/418 (14%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRR--LVNDKTFKIALMTLAEVRELKKMVNF 130
N +T ++ + ++ + L+EM R ++++ + + + V ++ V
Sbjct: 287 NKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRL 346
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCD 189
M + G +L + N ++ C+ V EA+ L++++ +W ++P +Y L+ G+C
Sbjct: 347 RDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCR 406
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR------- 242
G + +A ++N M G + ++ + +++ ++ ++A+ V+ +M +KR
Sbjct: 407 EGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLM-LKRGVTPDEV 465
Query: 243 ----MDDL----------------------GLSTY--RIVIDWMCKRGKISQAYTMLEEM 274
+ DL G STY +I+ CK K+ +A M
Sbjct: 466 SYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRM 525
Query: 275 FKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRA 330
+ G E D +T ++I G G + EA+KV E++EK P I LY+ LI GL + ++
Sbjct: 526 KELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKT 585
Query: 331 REATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTI 377
RE + EM +G P + TY L+ G + GR KG P V +
Sbjct: 586 REVMDLLSEMCLKGLSPNVVTYGTLIAGWCDE-GRLDKAFTAYFDMIEKGFAPNVIICSK 644
Query: 378 FVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLRE 435
V L + G+ +A +++++N V D+ F + ++G + +++ L E
Sbjct: 645 IVSSLYRLGRIDEANMLLQKMVNLDV---FLDHGYFDRLHKADDGNLDSQKIADTLDE 699
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 95/199 (47%), Gaps = 6/199 (3%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N + LC+ V +AK + L P+ Y LI GY G++ +A + + M
Sbjct: 713 NIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLK 772
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKIS 265
G P+I + +I K D A K+F + +K + + +Y I+ID CK G
Sbjct: 773 RGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAP-NVISYNILIDGYCKNGNTR 831
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLI 321
+A + +M K GI +T S++IYG +G + +A +++E+ + +I+ + L+
Sbjct: 832 EALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRELFADQNIAKFVKLV 891
Query: 322 KGLLRLRRAREATQVFREM 340
+G ++ ++ ++ M
Sbjct: 892 EGHVKCGEVKKIAKLHNMM 910
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 125/281 (44%), Gaps = 20/281 (7%)
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
N + Y LI G +GD+ A + LM + G + + +I+ + + K +EA KV
Sbjct: 252 NVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVL 311
Query: 236 QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
+ M L Y ++ID C+ K+ A + +EM G+ + +++I G
Sbjct: 312 REMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCK 371
Query: 296 RGRLREA----YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
G++ EA ++V+ +P+ Y L+ G R +A V+ EM++ G + + T
Sbjct: 372 NGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVT 431
Query: 352 YIMLLQG--------------HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVER 397
+ LL+G HL + PD V++ T+ + L K G+ A
Sbjct: 432 HNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDE-VSYCTL-LDLLFKMGEFFRALALWND 489
Query: 398 VMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
++ RG + +N ++ + E ++ EE +++E+G
Sbjct: 490 ILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGF 530
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 131/312 (41%), Gaps = 62/312 (19%)
Query: 166 ILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI 225
++++ E K + + ++K YC+ G + A +++ M G PS+ ++++ + +
Sbjct: 137 LVRVFEDFKFSPTVFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRK 196
Query: 226 NKDDEAMKVFQMMR------------------------------VKRMDDLGLS----TY 251
+ A+ V+ + VK MD LG TY
Sbjct: 197 GESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTY 256
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK 311
+ID G + +A +L+ M +RGI + +TL+ +I G + +L EA KV+ E+E+
Sbjct: 257 NSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMER 316
Query: 312 P-----DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK 366
D Y LI G R+ + +A ++ EM+ G M+ +I
Sbjct: 317 SEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLR--MNLFIC------------ 362
Query: 367 GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMF 426
+ L+N G K G+ +A + + R+++ +E + Y+ + + E V
Sbjct: 363 --NALIN-------GYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKA 413
Query: 427 EEVGKKLREVGL 438
V ++ VG+
Sbjct: 414 ISVYNEMLRVGI 425
Score = 41.6 bits (96), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 78/173 (45%), Gaps = 2/173 (1%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMV 128
F+ ++ T+ ++ + N++ + EM +R L N T+ + L + L +
Sbjct: 740 FSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQ 799
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGY 187
F ++ G ++ N ++ C+ EA L K L E I P+ I Y LI G+
Sbjct: 800 KLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGF 859
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
C GD+ +A+ + + M + + +I K++E K + + K+ MM +
Sbjct: 860 CKQGDMGKATNLLDEMRELFADQNIAKFVKLVEGHVKCGEVKKIAKLHNMMHI 912
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 94/419 (22%), Positives = 177/419 (42%), Gaps = 88/419 (21%)
Query: 69 CFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMV 128
C + + +N +D GK+ N+D+ W+
Sbjct: 244 CLEPDIVLYNVCIDCFGKAGNVDMAWK--------------------------------- 270
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGY 187
FFH + G + ++ LC+ + EA+ L ++ +E P AY +I GY
Sbjct: 271 -FFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGY 329
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
G +A K+ + + G PS+ + ++ K K DEA+ +F++M K+ +
Sbjct: 330 GSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM--KKDAEPN 387
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEM--------------------------------- 274
STY I+ID +C G++ +AY +L+EM
Sbjct: 388 SSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFE 447
Query: 275 --FKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLR 328
+RG D +T S+I GL +G++ EAY++ E++ + +Y LI+
Sbjct: 448 SASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHG 507
Query: 329 RAREATQVFREMIKRGCEPT---MHTYI-MLLQGHLGKRGRK--------GPDPLVNFDT 376
R + ++F+E+I+RGC+P ++TY+ + + ++GR G P V +
Sbjct: 508 RKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYS 567
Query: 377 IFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLRE 435
I + GL KAG++ + + + +G + YN + + V E+ ++++E
Sbjct: 568 ILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKE 626
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 141/313 (45%), Gaps = 22/313 (7%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEA 196
GC+ L +LN + + + V + + + + + P+ +Y LI G G E
Sbjct: 523 GCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARET 582
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVID 256
S I++ M +GF + +++ F K K +A ++ + M+ K + ++TY ++D
Sbjct: 583 SNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPT-VATYGAIVD 641
Query: 257 WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----P 312
+ K ++ +AY + EE +GIE + + SS+I G GR+ EAY ++EE+ K P
Sbjct: 642 GLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTP 701
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG-------- 364
++ ++ L+ L++ EA F+ M + C P +TY +L+ G +
Sbjct: 702 NVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFW 761
Query: 365 ----RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE 420
++G P V T + GL K G DA ER G +N + SN
Sbjct: 762 QDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNA 821
Query: 421 ----EGVVMFEEV 429
E +FEE
Sbjct: 822 NRAMEAYQVFEET 834
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 145/325 (44%), Gaps = 46/325 (14%)
Query: 77 FNRMVDIIGKSRNID---LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHI 133
N +D + K+ ++ + +E ++ G L + +++ I + L + + ++ N FH
Sbjct: 531 LNTYMDCVFKAGEVEKGRMIFEDIRSYGF--LPDVRSYSILIHGLTKAGQARETSNIFHA 588
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL------------------------ 169
M G N VV C+ V +A ++ ++
Sbjct: 589 MKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDR 648
Query: 170 ------------SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDK 217
S+ I+ N + Y LI G+ VG + EA I M +G P++ +
Sbjct: 649 LDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNS 708
Query: 218 MIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKR 277
+++ K + +EA+ FQ M+ + TY I+I+ +C+ K ++A+ ++M K+
Sbjct: 709 LLDALVKAEEINEALVCFQSMKEMKCPP-NTYTYSILINGLCRVQKYNKAFVFWQDMQKQ 767
Query: 278 GIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREA 333
G+ + +T +++I GL G + +AY + E + PD + ++ LI+G+ RA EA
Sbjct: 768 GLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEA 827
Query: 334 TQVFREMIKRGCEPTMHTYIMLLQG 358
QVF E RGC + + I LL
Sbjct: 828 YQVFEETRLRGCRINIKSCISLLDA 852
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 145/341 (42%), Gaps = 44/341 (12%)
Query: 58 LFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALM 116
LF + A+P NS T+N ++D++ ++ + L EM L N T I +
Sbjct: 376 LFEVMKKDAEP----NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVD 431
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKP 175
L + R+L++ F + GC ++ L ++ V EA L K L
Sbjct: 432 RLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNA 491
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
N + Y LI+ + G + KI+ + G +P + +++ ++ FK + ++ +F
Sbjct: 492 NPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIF 551
Query: 236 QMMR------------------------------VKRMDDLGLS----TYRIVIDWMCKR 261
+ +R M G + Y V+D CK
Sbjct: 552 EDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKS 611
Query: 262 GKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDIS----LY 317
GK+ +AY +LEEM ++ ++ T +I+ GL RL EAY + EE + I LY
Sbjct: 612 GKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLY 671
Query: 318 HGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
LI G ++ R EA + EM+K+G P ++T+ LL
Sbjct: 672 SSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDA 712
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/377 (21%), Positives = 166/377 (44%), Gaps = 26/377 (6%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIM 134
++FN ++ +GK R +D + M + N T+ I + L +++ M
Sbjct: 355 VSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEM 414
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDL 193
+L +N +V LC+ + + EA + S+ P+ + Y LI G G +
Sbjct: 415 EHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQV 474
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
EA +++ M D G + V +I FF + ++ K+F+ + ++R L+
Sbjct: 475 DEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKEL-IRRGCKPDLTLLNT 533
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPD 313
+D + K G++ + + E++ G D + S +I+GL G+ RE + +++
Sbjct: 534 YMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQG 593
Query: 314 ISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR---- 365
+L Y+ ++ G + + +A ++ EM ++ +PT+ TY ++ G L K R
Sbjct: 594 FALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDG-LAKIDRLDEA 652
Query: 366 ---------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHY 416
KG + V + + G K G+ +A +E +M +G+ + +N L
Sbjct: 653 YMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLL-- 710
Query: 417 YSNEEGVVMFEEVGKKL 433
+ +V EE+ + L
Sbjct: 711 ----DALVKAEEINEAL 723
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 153/391 (39%), Gaps = 55/391 (14%)
Query: 85 GKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLE 144
G +R I E ++ +G R N T+ I + L R + F M+D GC +
Sbjct: 249 GDTRKIMNLLEEMKSIGLRP--NIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVI 306
Query: 145 MLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLM 203
++ LC + +AK L +K+ + P+ + Y L+ + VGDL + WN M
Sbjct: 307 TYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEM 366
Query: 204 TDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK---------------------- 241
+G+ P + +IE K D A + +M K
Sbjct: 367 EVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRL 426
Query: 242 --------RMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSI 289
M+ LG+ +Y + ID+ K G ++A E M KRGI ++
Sbjct: 427 DEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNAS 486
Query: 290 IYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGC 345
+Y L GR+ EA + ++ K PD Y+ L+K + + +ATQ+ EMI +GC
Sbjct: 487 LYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGC 546
Query: 346 EPTMHTYIMLLQGHLGKRGRKGP-------------DPLVNFDTIFVGGLVKAGKSLDAA 392
EP + I L L K GR P V I + GL K GK L A
Sbjct: 547 EPDVMI-INSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKAL 605
Query: 393 KYVERVMNRGVEVPRFDYNKFLHYYSNEEGV 423
+ + G +N L S + V
Sbjct: 606 ELFGSMTESGCPPNTITFNSLLDCLSKNDAV 636
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 151/322 (46%), Gaps = 28/322 (8%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
N+ T+N ++D GKS+ I+ ++ EM R N T I + L + L K ++ +
Sbjct: 830 NNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLY 889
Query: 132 HIM-----NDCGCEYS--LEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLI 184
+ + + C Y ++ L K ++ K+ E L PN + Y LI
Sbjct: 890 YELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEM------LDYGCGPNSVIYNILI 943
Query: 185 KGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD 244
G+ G++ A +++ M EG P + ++E + DEA++ F+ +++ +D
Sbjct: 944 NGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLD 1003
Query: 245 DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK 304
+S Y +I+ + K ++ +A ++ EM RGI D T +++I L G++ A K
Sbjct: 1004 PDTVS-YNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVK 1062
Query: 305 VVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL 360
+ EE++ +P + Y+ LI+G +A VF++M+ GC P T+ L
Sbjct: 1063 MYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPN--- 1119
Query: 361 GKRGRKGPDPLVN--FDTIFVG 380
K R G LV+ F +F+G
Sbjct: 1120 -KYPRAG---LVHNPFGAVFIG 1137
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 123/290 (42%), Gaps = 36/290 (12%)
Query: 170 SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD 229
S +PN I + +I +L +A ++ + F P+ +I+ K + +
Sbjct: 859 SRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSE 918
Query: 230 EAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
+AMK+F+ M D G Y I+I+ K G+I A + ++M K GI D +
Sbjct: 919 QAMKIFE-----EMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKS 973
Query: 286 LSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMI 341
+ ++ L GR+ EA + EE++ PD Y+ +I GL + RR EA +F EM
Sbjct: 974 YTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMK 1033
Query: 342 KRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNR 401
RG P ++TY L+ HLG AGK A K E +
Sbjct: 1034 NRGISPDLYTYNALIL-HLGI----------------------AGKVDVAVKMYEELQLV 1070
Query: 402 GVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLADIFQRYGKK 451
G+E F YN + +S V KK+ VG + + F + K
Sbjct: 1071 GLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNK 1120
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 137/318 (43%), Gaps = 51/318 (16%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT--LAEVRELKKMVNFFHI 133
T+N M+ + K+R +D E L+ M V F L + + K ++ F
Sbjct: 412 TYNTMICGLLKARRLDEALELLENM-ESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFET 470
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGD 192
M G S+ N + TL + + EA+ + L + + P+ + Y L+K Y G
Sbjct: 471 MKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQ 530
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS--- 249
+ +A+++ + M +G EP + +++ +I T +K + D A K+F R+ +L L+
Sbjct: 531 IDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFG-----RLKNLKLAPTV 585
Query: 250 -TYRIVIDWMCKRGKISQAYTMLEEMFKRG------------------------------ 278
TY I++ + K GKI +A + M + G
Sbjct: 586 VTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCR 645
Query: 279 -----IEADNLTLSSIIYGLLARGRLREAYKVVEEIEK---PDISLYHGLIKGLLRLRRA 330
D LT ++IIYGL+ GR+ A+ +++K PD LI G++R R
Sbjct: 646 MTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMKKFLSPDYVTLCTLIPGVVRHGRV 705
Query: 331 REATQVFREMIKRGCEPT 348
+A +V E + + C T
Sbjct: 706 EDAIKVVMEFVHQACLQT 723
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 155/345 (44%), Gaps = 26/345 (7%)
Query: 114 ALMTLAEVRELKKMVNFFHIM-NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE- 171
++T AE+ E ++F I+ + C+ ML ++K LC+RK ++A+ + K ++
Sbjct: 734 CILTEAEIEE---AISFAEILVCNSVCQDDHVML-PLIKVLCKRKKALDAQNVFDKFTKN 789
Query: 172 -WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDE 230
I P +Y L+ G +A +++ M G P+ + +++ K + ++
Sbjct: 790 LGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINK 849
Query: 231 AMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
++ MR + + + T+ I+I + K +++A + E+ T +I
Sbjct: 850 LYDLYSEMRSRGCEPNAI-THNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLI 908
Query: 291 YGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
GLL GR +A K+ EE+ P+ +Y+ LI G + A ++F++M+K G
Sbjct: 909 DGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIR 968
Query: 347 PTMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAK 393
P + +Y +L++ L GR G DP + GL K+ + +A
Sbjct: 969 PDLKSYTILVEC-LCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALS 1027
Query: 394 YVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
+ NRG+ + YN + + V + ++ ++L+ VGL
Sbjct: 1028 LFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGL 1072
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/384 (21%), Positives = 150/384 (39%), Gaps = 57/384 (14%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVR------- 122
F H + N M++I+ + R I+ M ++ + + T + + ++
Sbjct: 127 FVHTTDACNYMLEILREQRRIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAP 186
Query: 123 -ELKKMVNFFHIMNDCGCEYSLE-MLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAY 180
L+KM I+N YS +++ ++ C L V + + SE +KP+ Y
Sbjct: 187 FALRKMTEVGFILN----AYSYNGLIHLLLPGFCNEALKVYKRMI----SEGMKPSMKTY 238
Query: 181 GWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
L+ GD + + M G P+I I + + D+A +F
Sbjct: 239 SALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIF----- 293
Query: 241 KRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR 296
K MDD G TY ++ID +C GK+ +A + +M D +T +++
Sbjct: 294 KEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKV 353
Query: 297 GRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
G L + E+E PD+ Y LI+ L + A + M +G P +HTY
Sbjct: 354 GDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTY 413
Query: 353 IMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNK 412
+ GL+KA + +A + +E + + GV+ F Y
Sbjct: 414 -----------------------NTMICGLLKARRLDEALELLENMESLGVKPTAFSYVL 450
Query: 413 FLHYYSNE----EGVVMFEEVGKK 432
F+ YY + + FE + K+
Sbjct: 451 FIDYYGKSGDPAKAIDTFETMKKR 474
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/336 (20%), Positives = 136/336 (40%), Gaps = 25/336 (7%)
Query: 78 NRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIMND 136
N +++ + K+ +D W+ + +L T+ I L L + ++ K + F M +
Sbjct: 554 NSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTE 613
Query: 137 CGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIE 195
GC + N ++ L + V A + +++ P+ + Y +I G G +
Sbjct: 614 SGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDY 673
Query: 196 ASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVI 255
A ++ M + P + +I + + ++A+KV + + ++
Sbjct: 674 AFWFFHQM-KKFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELM 732
Query: 256 DWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK---- 311
+ + +I +A + E + + D+ + +I L R + +A V ++ K
Sbjct: 733 ECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGI 792
Query: 312 -PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR----- 365
P + Y+ L+ GLL +A ++F +M G P TY +LL H GK R
Sbjct: 793 HPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAH-GKSKRINKLY 851
Query: 366 --------KGPDPLVNFDTIFVGGLVKA---GKSLD 390
+G +P I + LVK+ K+LD
Sbjct: 852 DLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALD 887
>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
Length = 506
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 136/263 (51%), Gaps = 14/263 (5%)
Query: 83 IIGKSRN-IDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEY 141
I+GK ++ IDLF + + E + + TF I + + LKK N +M +
Sbjct: 255 IVGKLKDAIDLFNKMILENIKPDVY---TFNILVDGFCKEGRLKKAKNVLDMMMIQDIKP 311
Query: 142 SLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIW 200
++ N +V C+ + + E K + + + + IKPN + Y L+ GYC V + +A KI+
Sbjct: 312 NVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIF 371
Query: 201 NLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCK 260
N M+ G ++ + MI F KI K D+AMK+F M K + + TY +ID +CK
Sbjct: 372 NTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIP-DVVTYNSLIDGLCK 430
Query: 261 RGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISLYHGL 320
GKIS A+ ++ EM RG + +T +SI+ LL K+ ++ +P++ L
Sbjct: 431 SGKISYAFQLVNEMHDRGQPPNIITYNSILNALLT--------KLKDQGIQPNMHTDTIL 482
Query: 321 IKGLLRLRRAREATQVFREMIKR 343
IKGL + + A +VF +++ +
Sbjct: 483 IKGLCQSGKLEAARKVFEDLLVK 505
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 154/328 (46%), Gaps = 41/328 (12%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N++ +N ++D + K ++++ ++ EM +R+ D T+ + V +LK ++ F
Sbjct: 207 NAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLF 266
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVG 191
+ M + E IKP+ + L+ G+C G
Sbjct: 267 NKM----------------------------------ILENIKPDVYTFNILVDGFCKEG 292
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTY 251
L +A + ++M + +P++ + +++ F K K E VF MM +K+ + TY
Sbjct: 293 RLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMM-MKQGIKPNVVTY 351
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK 311
++D C ++++A + M +RG+ A+ + + +I G ++ +A K+ E+
Sbjct: 352 CSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHH 411
Query: 312 ----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKG 367
PD+ Y+ LI GL + + A Q+ EM RG P + TY +L L K +G
Sbjct: 412 KHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNALLTKLKDQG 471
Query: 368 PDPLVNFDTIFVGGLVKAGKSLDAAKYV 395
P ++ DTI + GL ++GK L+AA+ V
Sbjct: 472 IQPNMHTDTILIKGLCQSGK-LEAARKV 498
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 130/276 (47%), Gaps = 29/276 (10%)
Query: 145 MLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLM 203
M N V+ + + K V +A L ++ ++ I P+ + Y LI+G+ VG L +A ++N M
Sbjct: 210 MYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKM 269
Query: 204 TDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGK 263
E +P + + +++ F K + +A V MM ++ + +ST+ ++D CK K
Sbjct: 270 ILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKP-NVSTFNTLVDGFCKDRK 328
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHG 319
+ + T+ M K+GI+ + +T S++ G ++ +A K+ + + ++ Y+
Sbjct: 329 MKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNI 388
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFV 379
+I G ++++ +A ++F EM + P + TY L +
Sbjct: 389 MINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSL-----------------------I 425
Query: 380 GGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
GL K+GK A + V + +RG YN L+
Sbjct: 426 DGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILN 461
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 109/229 (47%), Gaps = 15/229 (6%)
Query: 146 LNKVVKTLCQRKLVVEAKYLILKLS-----EWIKPNEIAYGWLIKGYCDVGDLIEASKIW 200
NK++ +L + K + +L LS E I PN + + LI +C +G + A +
Sbjct: 71 FNKILGSLVKSK----HYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVL 126
Query: 201 NLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCK 260
+ G+EP I ++ I+ F + +A+ F V L +Y +I+ +CK
Sbjct: 127 AKILKMGYEPDIITLNTFIKGFCLKGQIHQALN-FHDKLVALGFHLDQVSYGTLINGLCK 185
Query: 261 RGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISL 316
G+ A +L + + ++ + + +++I G+ + +A+ + E+ PD+
Sbjct: 186 VGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVT 245
Query: 317 YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
Y LI+G + + ++A +F +MI +P ++T+ +L+ G K GR
Sbjct: 246 YSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDG-FCKEGR 293
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 79/194 (40%), Gaps = 25/194 (12%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVNFF 131
N TFN +VD K R + M ++ + + +LM V+++ K F
Sbjct: 312 NVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIF 371
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDV 190
+ M+ G ++ N ++ C+ K V +A L +++ + I P+ + Y LI G C
Sbjct: 372 NTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKS 431
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD---------------------- 228
G + A ++ N M D G P+I + ++ KD
Sbjct: 432 GKISYAFQLVNEMHDRGQPPNIITYNSILNALLTKLKDQGIQPNMHTDTILIKGLCQSGK 491
Query: 229 -DEAMKVFQMMRVK 241
+ A KVF+ + VK
Sbjct: 492 LEAARKVFEDLLVK 505
>gi|222423065|dbj|BAH19514.1| AT3G04130 [Arabidopsis thaliana]
Length = 508
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 173/389 (44%), Gaps = 38/389 (9%)
Query: 25 RLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDII 84
RL S NL+ ++ + F WR ++ + + H+S ++ VDI+
Sbjct: 73 RLSSDEICKRVNLSDGLVHKLLHRFRDDWRSALGILKWAESCKG-HKHSSDAYDMAVDIL 131
Query: 85 GKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLE 144
GK++ D E ++ M +LV T + A E ++ V F + + G E + E
Sbjct: 132 GKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTE 191
Query: 145 MLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNL-- 202
+N ++ TLC+ K V +A+ ++L+L I PN + I G+C + EA +W +
Sbjct: 192 SMNLLLDTLCKEKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEA--LWTIQE 249
Query: 203 MTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWM 258
M GF P + +I + + E +KV++M+ M+ G TY ++ +
Sbjct: 250 MKGHGFRPCVISYTTIIRCYC---QQFEFIKVYEML--SEMEANGSPPNSITYTTIMSSL 304
Query: 259 CKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDI---- 314
+ + +A + M + G + D+L + +I+ L GRL EA +V +E P++
Sbjct: 305 NAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVF-RVEMPELGVSI 363
Query: 315 --SLYHGLIKGLLRLRRAREATQVFREMIKRG-CEPTMHTYIMLLQGHLGKRGRKGPDPL 371
S Y+ +I +A ++ +EM C P +HTY LL+ KRG
Sbjct: 364 NTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCF-KRG------- 415
Query: 372 VNFDTIFVGGLVKA-----GKSLDAAKYV 395
D + VG L+K SLD + Y
Sbjct: 416 ---DVVEVGKLLKEMVTKHHLSLDESTYT 441
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 70/147 (47%), Gaps = 2/147 (1%)
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNL-MTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
KP+ + Y LI G L EA +++ + M + G + + MI + +++D+A+
Sbjct: 326 KPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAI 385
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMF-KRGIEADNLTLSSIIY 291
++ + M + + + TY+ ++ KRG + + +L+EM K + D T + +I
Sbjct: 386 ELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQ 445
Query: 292 GLLARGRLREAYKVVEEIEKPDISLYH 318
L AY + EE+ DI+ H
Sbjct: 446 RLCRANMCEWAYCLFEEMISQDITPRH 472
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 73/176 (41%), Gaps = 3/176 (1%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
N T+ + +L +E ++ + M GC+ N ++ TL + + EA+ +
Sbjct: 293 NSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVF 352
Query: 167 -LKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGF-EPSIDVVDKMIETFF 223
+++ E + N Y +I YC + +A ++ M P + ++ + F
Sbjct: 353 RVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCF 412
Query: 224 KINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGI 279
K E K+ + M K L STY +I +C+ AY + EEM + I
Sbjct: 413 KRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDI 468
>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Vitis vinifera]
Length = 708
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 100/436 (22%), Positives = 193/436 (44%), Gaps = 48/436 (11%)
Query: 11 VCTILYQQ---QYSPESRLHSSLSSCNFNLTHEFFLQICNNFP-LSWRPVYLFFQYTQKA 66
VC YQQ +++P +LH L S +LTH+ + + + + V L F Y
Sbjct: 70 VCQSYYQQTHVRFTP-PKLHLPLDS--ESLTHDQAITVVASLADEAGSMVALSFLYWAIG 126
Query: 67 QPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKK 126
P F H + + ++N++ E +Q M +M AE +LK+
Sbjct: 127 FPKFRHFMRLYIVSATALIGNKNLERANEVMQCM--------------VMNFAENGKLKE 172
Query: 127 MVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIK 185
VN M + G S + LN V+ LV A+ + +++ + + P+ +++ ++
Sbjct: 173 AVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVV 232
Query: 186 GYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD 245
C++G ++EA + N M + GF +I+ F + + + F +M +
Sbjct: 233 ACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFW-----KMVE 287
Query: 246 LGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
+GL+ + +I+ +CK+G I QA+ +LEEM +RG + + T +++I GL +G +
Sbjct: 288 MGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEK 347
Query: 302 AYK-----VVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
A++ V + KP++ Y +I G + + A + M ++G P +TY L+
Sbjct: 348 AFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLI 407
Query: 357 QGH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVE 404
GH + G++G P + + GL K G +A + + +V G++
Sbjct: 408 DGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQ 467
Query: 405 VPRFDYNKFLHYYSNE 420
Y + + +
Sbjct: 468 ADGVTYTILMSVHCRQ 483
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 149/336 (44%), Gaps = 29/336 (8%)
Query: 102 RRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVE 161
R +V++ T + + + + ++V +F M + G ++ ++ LC++ + +
Sbjct: 253 RGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQ 312
Query: 162 AKYLILKLSE--WIKPNEIAYGWLIKGYCDVGDLIEASKIW-NLMTDEGFEPSIDVVDKM 218
A L+ ++ W KPN + LI G C G +A +++ L+ +G++P++ M
Sbjct: 313 AFELLEEMVRRGW-KPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAM 371
Query: 219 IETFFKINKDDEAMKVFQMMRVKRMDDLGL----STYRIVIDWMCKRGKISQAYTMLEEM 274
I + K +K + A M + RM + GL +TY +ID CK G +AY +++ M
Sbjct: 372 INGYCKEDKLNRAE-----MLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLM 426
Query: 275 FKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRA 330
K G + T ++II GL +G L EAY+++ ++ + D Y L+ R
Sbjct: 427 GKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADT 486
Query: 331 REATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK------------GPDPLVNFDTIF 378
+ F +M+K G P +H+Y L+ ++ K G P T
Sbjct: 487 NRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSM 546
Query: 379 VGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
+ G + G + A K +R+ N G Y +
Sbjct: 547 ICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALI 582
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/279 (18%), Positives = 109/279 (39%), Gaps = 45/279 (16%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMV 128
F+ N T+N ++D + K ++D + L ++ L D T+ I + + + +
Sbjct: 431 FSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSL 490
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAK------------------------- 163
FF+ M G + ++ T C++K + E++
Sbjct: 491 VFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGY 550
Query: 164 ------YLILKL-----SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSI 212
L +KL + P+ I YG LI G C L +A +++ M D+G P
Sbjct: 551 CRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPC- 609
Query: 213 DVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLE 272
V ++ + KDD + + + R+++ + T ++ +C GK+ A
Sbjct: 610 -EVTRLTLAYEYCKKDDSSTAINVLDRLEKRQ--WIRTVNTLVRKLCSEGKLDMAALFFH 666
Query: 273 EMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK 311
++ + + +TL G + + Y +V E+ +
Sbjct: 667 KLLDKEPNVNRVTL----LGFMNKCYESNKYGLVSELSE 701
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 88/378 (23%), Positives = 169/378 (44%), Gaps = 30/378 (7%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHIM 134
TF ++ + +D L++M + V N ++ + L E + + + M
Sbjct: 207 TFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDM 266
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGDL 193
CE ++ N V+ LC+ + EA L+ + L + + YG+L+ G C +G +
Sbjct: 267 FLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQV 326
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
EA + N + + P+ + + +I + + +EA + V + T+ I
Sbjct: 327 DEARALLNKIPN----PNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNI 382
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPD 313
+ID + K+G + A +L EM + E + +T + +I G +GRL EA ++V +
Sbjct: 383 MIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKG 442
Query: 314 ISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPD 369
+SL Y+ LI L + EA Q+F EM +GC+P ++T+ L+ G + K +
Sbjct: 443 LSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLC--KNHKMEE 500
Query: 370 PLVNFDTIFVGGLVKAGKSLD--------------AAKYVERVMNRGVEVPRFDYNKFLH 415
L + +F+ G++ + + A K V+ ++ RG + YN +
Sbjct: 501 ALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIK 560
Query: 416 YYSN----EEGVVMFEEV 429
E+G+ +FEE+
Sbjct: 561 ALCKTGAVEKGLGLFEEM 578
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 178/370 (48%), Gaps = 24/370 (6%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
F+ +++T+ ++ + + +D L ++ V T + E K ++
Sbjct: 306 FSTDALTYGYLMHGLCRMGQVDEARALLNKIPNPNTVLYNTLISGYVASGRFEEAKDLL- 364
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYC 188
++ M G E N ++ L ++ +V A L+ ++ ++ +PN I Y LI G+C
Sbjct: 365 -YNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFC 423
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
G L EA++I N M+ +G + + +I K +EA+++F M K +
Sbjct: 424 KQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKP-DI 482
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
T+ +I+ +CK K+ +A ++ +MF G+ A+ +T +++++ L R +++A+K+V+E
Sbjct: 483 YTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDE 542
Query: 309 IEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
+ L Y+GLIK L + + +F EM+ +G PT+ + +L+ G L + G
Sbjct: 543 MLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISG-LCRTG 601
Query: 365 R-------------KGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY 410
+ +G P +V ++++ + GL K G +A+ ++ + G+ Y
Sbjct: 602 KVNDALKFLQDMIHRGLTPDIVTYNSL-INGLCKMGHVQEASNLFNKLQSEGIRPDAITY 660
Query: 411 NKFLHYYSNE 420
N + + +E
Sbjct: 661 NTLISRHCHE 670
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 132/282 (46%), Gaps = 20/282 (7%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
LS + P +G ++K C V ++ A + M G P+ + +I + N+
Sbjct: 197 LSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRV 256
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
EA+++ + M + + + T+ VI +C+ G+I +A +L+ M RG D LT
Sbjct: 257 SEALQLLEDMFLMCCEP-DVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGY 315
Query: 289 IIYGLLARGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQ-VFREMIKRGCEP 347
+++GL G++ EA ++ +I P+ LY+ LI G + R EA ++ M+ G EP
Sbjct: 316 LMHGLCRMGQVDEARALLNKIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEP 375
Query: 348 TMHTYIMLLQGHLGKRG-------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKY 394
+T+ +++ G L K+G K +P V TI + G K G+ +AA+
Sbjct: 376 DAYTFNIMIDG-LVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEI 434
Query: 395 VERVMNRGVEVPRFDYNKFLHYYSN----EEGVVMFEEVGKK 432
V + +G+ + YN + EE + +F E+ K
Sbjct: 435 VNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGK 476
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 105/232 (45%), Gaps = 3/232 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFF 131
N++ +N ++ + K NI+ + EM + D TF + L + ++++ ++ +
Sbjct: 446 NTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLY 505
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKP-NEIAYGWLIKGYCDV 190
H M G + N +V R + +A L+ ++ P + I Y LIK C
Sbjct: 506 HDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKT 565
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G + + ++ M +G P+I + +I + K ++A+K Q M + R + T
Sbjct: 566 GAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDM-IHRGLTPDIVT 624
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
Y +I+ +CK G + +A + ++ GI D +T +++I G +A
Sbjct: 625 YNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDA 676
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 80/198 (40%), Gaps = 23/198 (11%)
Query: 240 VKRMDDLGL----STYRIVIDWMCKRGKISQAYTMLEEMF-----KRGIEADNLTLSSII 290
+K+M D GL S + +++ K G QA +L +M+ ++ N+ L ++
Sbjct: 122 LKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRLLLDMWGVYSCDPTFKSYNVVLDILV 181
Query: 291 YGLLARGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
G R Y ++ P + + ++K L + A + R+M K GC P
Sbjct: 182 DGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSV 241
Query: 351 TYIMLLQGHLGKRGRKGP-------------DPLVNFDTIFVGGLVKAGKSLDAAKYVER 397
Y L+ L + R +P V + GL +AG+ +AAK ++R
Sbjct: 242 IYQTLIHA-LCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDR 300
Query: 398 VMNRGVEVPRFDYNKFLH 415
++ RG Y +H
Sbjct: 301 MLLRGFSTDALTYGYLMH 318
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 62/141 (43%), Gaps = 2/141 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALMTLAEVRELKKMVNFF 131
++IT+N ++ + K+ ++ +EM G+ + I + L ++ + F
Sbjct: 551 DNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFL 610
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
M G + N ++ LC+ V EA L KL SE I+P+ I Y LI +C
Sbjct: 611 QDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHE 670
Query: 191 GDLIEASKIWNLMTDEGFEPS 211
G +A + D GF P+
Sbjct: 671 GMFNDACLLLYKGVDSGFIPN 691
>gi|115458614|ref|NP_001052907.1| Os04g0446100 [Oryza sativa Japonica Group]
gi|38344550|emb|CAD40961.2| OSJNBa0027P08.18 [Oryza sativa Japonica Group]
gi|113564478|dbj|BAF14821.1| Os04g0446100 [Oryza sativa Japonica Group]
Length = 583
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 160/333 (48%), Gaps = 26/333 (7%)
Query: 70 FAHNSITFNRMVDIIGKSRNID---LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKK 126
+A+N + M +IG+ R D LF +Q+ R + +F + + + V +++K
Sbjct: 216 YAYNKL----MSSLIGRGRVHDVVALFERWIQD--RVYSPDVWSFNVVIKGVCRVGQVQK 269
Query: 127 MVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE--WIKPNEIAYGWLI 184
+ MN+ GC N +V LC+ V ++ +L PN + + +I
Sbjct: 270 ALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVI 329
Query: 185 KGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ-MMRVKRM 243
GYC G L +A ++N M G P+ + +I + K+ A++V+Q M R++
Sbjct: 330 SGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCP 389
Query: 244 DDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
D+ T+ +ID C+ G++ A + +M + I+ + T S II+ L + R EA
Sbjct: 390 PDV--VTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAI 447
Query: 304 KVVEEIE-KPDIS----LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
++ E+ +PDI+ +Y+ +I L + + EA + + M ++GC P +TY +L+ G
Sbjct: 448 GLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIG 507
Query: 359 HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDA 391
+ K ++ +F +V+AG S D+
Sbjct: 508 YCMKS-------RISEAIMFFHEMVEAGCSPDS 533
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 122/273 (44%), Gaps = 7/273 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV--NDKTFKIALMTLAEVRELKKMVNF 130
+++T N +VD + ++ + E L+ + R + N TF + + +L+ +
Sbjct: 285 DTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAV 344
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCD 189
++ M G + N ++ + + A + +++ P+ + + LI GYC
Sbjct: 345 YNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCR 404
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
G L +A +IW+ M +P++ +I + K N+ DEA+ + + ++
Sbjct: 405 CGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAF 464
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA----YKV 305
Y VID +CK GK+ +A + + M ++G D T + +I G + R+ EA +++
Sbjct: 465 IYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEM 524
Query: 306 VEEIEKPDISLYHGLIKGLLRLRRAREATQVFR 338
VE PD + I LL+ E V R
Sbjct: 525 VEAGCSPDSITVNCFISCLLKAGMPNEVDHVMR 557
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/296 (17%), Positives = 130/296 (43%), Gaps = 25/296 (8%)
Query: 142 SLEMLNKVVKTLCQRKLVVEAKYLILKLSE--WIKPNEIAYGWLIKGYCDVGDLIEASK- 198
S +++ LC+ +A L +++ P+ +L+ C +L++AS
Sbjct: 143 SAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSS-CTCANLLDASAT 201
Query: 199 IWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWM 258
+ + ++ G +K++ + + + + +F+ R+ + ++ +VI +
Sbjct: 202 LLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGV 261
Query: 259 CKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK-----PD 313
C+ G++ +A ++E M + G D +T + ++ GL + ++V+ +++ P+
Sbjct: 262 CRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPN 321
Query: 314 ISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKG------ 367
+ + +I G + + +A V+ +M+ G P TY +L+ G+ GK G G
Sbjct: 322 VVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGY-GKVGDLGSAVEVY 380
Query: 368 --------PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
P +V F ++ + G + G+ DA + + ++ + ++ +H
Sbjct: 381 QQMTRLRCPPDVVTFSSL-IDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIH 435
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/228 (19%), Positives = 94/228 (41%), Gaps = 22/228 (9%)
Query: 210 PSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYT 269
PS ++I + + +A+++F M ++ + + T
Sbjct: 142 PSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASAT 201
Query: 270 MLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE-----IEKPDISLYHGLIKGL 324
+L + + G + + ++ L+ RGR+ + + E + PD+ ++ +IKG+
Sbjct: 202 LLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGV 261
Query: 325 LRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG---------------HLGKRGRKGPD 369
R+ + ++A ++ M + GC P T+ +L+ G L + G P+
Sbjct: 262 CRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPN 321
Query: 370 PLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
+V F ++ + G KAGK DA ++ G+ YN ++ Y
Sbjct: 322 -VVTFTSV-ISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGY 367
>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
Length = 1595
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 135/296 (45%), Gaps = 7/296 (2%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMV 128
F +T+ +++ +GK +++ EM +R N + + + L R + +
Sbjct: 1044 FLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAM 1103
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGY 187
M GC+ + N ++ LC V +A++ + + + + PN+++Y LI G+
Sbjct: 1104 VILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGF 1163
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C G+L+ AS + M G P + +I K EA+ V + M +R
Sbjct: 1164 CMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKM-TERQVFPD 1222
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
++ Y ++I +CK+ + A +LEEM ++ ++ D +++I G + L +A K+ E
Sbjct: 1223 VNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFE 1282
Query: 308 EIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
+E PDI + +IKG + EA M K GC P TY ++ G+
Sbjct: 1283 FMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGY 1338
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 126/293 (43%), Gaps = 20/293 (6%)
Query: 149 VVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEG 207
+V+ LC + V E LI + P+ + Y LI GYC GD+ + M G
Sbjct: 984 LVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNG 1043
Query: 208 FEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQA 267
F P++ +I K ++ +F MR KR + Y VID +C +QA
Sbjct: 1044 FLPTLVTYGSLINWLGKKGDLEKIGSLFLEMR-KRGFSPNVQIYNSVIDALCNCRSATQA 1102
Query: 268 YTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKG 323
+L++MF G + D +T +++I GL G +R+A + E + P+ Y LI G
Sbjct: 1103 MVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHG 1162
Query: 324 LLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL------------GKRGRKGPDPL 371
A+ + EM+ RG P + T+ L+ G + K + P
Sbjct: 1163 FCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPD 1222
Query: 372 VNFDTIFVGGLVKAGKSLDAAKYV-ERVMNRGVEVPRFDYNKFLHYYSNEEGV 423
VN + + GL K + L AAK + E ++ + V+ F Y + + E +
Sbjct: 1223 VNIYNVLISGLCKK-RMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENL 1274
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 126/307 (41%), Gaps = 30/307 (9%)
Query: 77 FNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRE--LKKMVNFFHIM 134
+N ++ + K R + L+EM + + D+ F A + +R L F M
Sbjct: 1226 YNVLISGLCKKRMLPAAKNILEEMLEKNVQPDE-FVYATLIDGFIRSENLGDARKIFEFM 1284
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIK----PNEIAYGWLIKGYCDV 190
G + N ++K CQ ++ EA IL +S K P+E Y +I GY
Sbjct: 1285 EHKGVCPDIVSCNAMIKGYCQFGMMSEA---ILCMSNMRKVGCIPDEFTYTTVISGYAKQ 1341
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G+L A + M +P++ +I + K D A +F M+ + + + T
Sbjct: 1342 GNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSP-NVVT 1400
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA--------------- 295
Y I+I + K+ K+ +A E M +++TL ++ GL +
Sbjct: 1401 YTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSE 1460
Query: 296 -RGR---LREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
G+ L K+V +I P S Y+ +I L R REA M K+G P T
Sbjct: 1461 VHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPIT 1520
Query: 352 YIMLLQG 358
++ LL G
Sbjct: 1521 FLSLLYG 1527
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 101/437 (23%), Positives = 175/437 (40%), Gaps = 63/437 (14%)
Query: 54 RPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFK 112
+P LF + + P + +T+ ++D + K++ D Q+M N+ T+
Sbjct: 217 KPYNLFLEMIDRGIP---PDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYN 273
Query: 113 IALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SE 171
+ + + K++V M+ G + ++ LC+ EA++ + +
Sbjct: 274 CLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRK 333
Query: 172 WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEA 231
IKP YG LI GY G L E +LM + G P + + + K D+A
Sbjct: 334 GIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKA 393
Query: 232 MKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
M +F MR + + Y +ID +CK G++ A +M G+ + + +S++Y
Sbjct: 394 MDIFNKMRQHGLSP-NVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVY 452
Query: 292 GLLA-----------------------------------RGRLREAYKVVEEIE----KP 312
GL GR+ E ++++ +E +P
Sbjct: 453 GLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRP 512
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG-------- 364
D Y LI G R EA +VF M+ G PT TY LL G+
Sbjct: 513 DAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLF 572
Query: 365 ----RKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY-- 417
RKG P +V ++TI + GL + + +A + ++N G + + YN L+
Sbjct: 573 REMLRKGVTPGVVTYNTI-LHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCK 631
Query: 418 SN--EEGVVMFEEVGKK 432
SN +E MF+ + K
Sbjct: 632 SNCVDEAFKMFQSLCSK 648
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 143/305 (46%), Gaps = 19/305 (6%)
Query: 88 RNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLN 147
+ +D+F + Q +VN AL L V + + V F ++N+ G ++ + N
Sbjct: 392 KAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAE--VKFNQMINE-GVTPNIVVFN 448
Query: 148 KVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDE 206
+V LC A+ L+ + L + I PN + + LI C+VG ++E ++ +LM
Sbjct: 449 SLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHV 508
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRG 262
G P +I + + DEA KVF M +GLS TY ++ C
Sbjct: 509 GVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMV-----SIGLSPTEVTYNTLLHGYCSAS 563
Query: 263 KISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA----YKVVEEIEKPDISLYH 318
+I AY + EM ++G+ +T ++I++GL R EA ++ K DI Y+
Sbjct: 564 RIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYN 623
Query: 319 GLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIF 378
++ GL + EA ++F+ + +G + + T+ +++ G L K GRK D + F I
Sbjct: 624 IILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMI-GALLKGGRK-EDAMDLFAAIP 681
Query: 379 VGGLV 383
GLV
Sbjct: 682 ANGLV 686
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 92/409 (22%), Positives = 167/409 (40%), Gaps = 65/409 (15%)
Query: 58 LFFQYTQKAQPCFAHNSITFNRMVDIIGKSR-------NIDLFWETLQEMGRRRLVNDKT 110
LF + A+P FN ++ + ++R + F ++E + N T
Sbjct: 36 LFDELLHHARPASVR---AFNHLLTAVSRARCSSASELAVSHFNRMVRECSDKVAPNLCT 92
Query: 111 FKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS 170
+ I + + L+ F ++ G +N+++K LC K V EA ++L+
Sbjct: 93 YSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLLQRM 152
Query: 171 EWIK--PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDE-GFEPSIDVVDKMIETFFKINK 227
+ P+ ++Y L+KG C+ EA ++ ++M D+ G +VV
Sbjct: 153 PELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVV------------ 200
Query: 228 DDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLS 287
+Y IVI+ G++ + Y + EM RGI D +T +
Sbjct: 201 ----------------------SYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYT 238
Query: 288 SIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
++I GL A V +++ KP+ Y+ LI G L + + +E Q+ EM R
Sbjct: 239 TVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSAR 298
Query: 344 GCEPTMHTYIMLLQGHLGKRG-------------RKGPDPLVNFDTIFVGGLVKAGKSLD 390
G +P +TY LL +L K G RKG P V+ I + G G +
Sbjct: 299 GLKPDCYTYGSLLN-YLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSE 357
Query: 391 AAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLA 439
+++ ++ G+ +N F Y+ + ++ K+R+ GL+
Sbjct: 358 MHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLS 406
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 148/367 (40%), Gaps = 18/367 (4%)
Query: 90 IDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKV 149
++L + GRR N ++ I + ++ K N F M D G + V
Sbjct: 181 LELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTV 240
Query: 150 VKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGF 208
+ LC+ +L A+ + ++ KPN Y LI GY +G E ++ M+ G
Sbjct: 241 IDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGL 300
Query: 209 EPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAY 268
+P ++ K + EA F M +++ +STY I+I +G +S+ +
Sbjct: 301 KPDCYTYGSLLNYLCKNGRCREARFFFDSM-IRKGIKPKVSTYGILIHGYATKGALSEMH 359
Query: 269 TMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGL 324
+ L+ M + G+ D+ + G + +A + ++ + P++ Y LI L
Sbjct: 360 SFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDAL 419
Query: 325 LRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG--HLGKRGR----------KGPDPLV 372
+L R +A F +MI G P + + L+ G + K R +G P
Sbjct: 420 CKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNA 479
Query: 373 NFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKK 432
F + L G+ ++ + ++ + + GV F Y + Y E+V
Sbjct: 480 VFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDG 539
Query: 433 LREVGLA 439
+ +GL+
Sbjct: 540 MVSIGLS 546
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 82/171 (47%), Gaps = 2/171 (1%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N ++ L Q K EAK L L + + K + Y ++ G C + EA K++ +
Sbjct: 588 NTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCS 647
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKIS 265
+G + +I MI K + ++AM +F + + + TYR+V + + + G +
Sbjct: 648 KGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVP-NVVTYRLVAENLIEEGSLE 706
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISL 316
+ ++ M K G ++ L++++ LL RG + A + ++++ + S+
Sbjct: 707 EFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSV 757
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 104/461 (22%), Positives = 206/461 (44%), Gaps = 43/461 (9%)
Query: 8 LVRVCTILYQQQYS-------PESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFF 60
LVRVC L + + E + + +CN L+ FL++ N ++W
Sbjct: 185 LVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLS--LFLKL-NRMEMAW------V 235
Query: 61 QYTQKAQPCFAHNSITFNRMVDII---GKSRNIDLFWETLQEMG-RRRLVNDKTFKIALM 116
Y + + + TFN MV+++ GK + F ++ +G + +V+ T
Sbjct: 236 LYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYS 295
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKP 175
+ + +++++ + G E ++ +C+ + EA L K+ E + P
Sbjct: 296 SRGNIEGARRILDAMRVK---GIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVP 352
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
N + Y LI GYC+ GDL A + M +G PS+ + ++ F + EA +
Sbjct: 353 NAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMI 412
Query: 236 QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
+ MR K + + TY I+I+ + G +A+ + EM +GIE ++T +S+IY L
Sbjct: 413 KEMRKKGIIPDAI-TYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSR 471
Query: 296 RGRLREA----YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
R R++EA K++++ PD+ +++ ++ G A + +EM ++ P T
Sbjct: 472 RNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVT 531
Query: 352 YIMLLQGH------------LGKRGRKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERV 398
+ L+QG L + R+G P ++++T+ + G + G DA + + +
Sbjct: 532 FNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTL-ISGYGRRGDIKDAFRVRDEM 590
Query: 399 MNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLA 439
++ G YN + + + EE+ K++ G++
Sbjct: 591 LSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGIS 631
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 120/256 (46%), Gaps = 39/256 (15%)
Query: 142 SLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIW 200
S+ N +V L + EA +I ++ + I P+ I Y LI GY G+ +A +
Sbjct: 388 SVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLH 447
Query: 201 NLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ------------------------ 236
N M +G EP+ +I + N+ EA +F+
Sbjct: 448 NEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCAN 507
Query: 237 ------MMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTL 286
M +K MD + T+ ++ C+ GK+ +A +L+EM +RGI+ D+++
Sbjct: 508 GNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISY 567
Query: 287 SSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIK 342
+++I G RG +++A++V +E+ P + Y+ LIK L + + A ++ +EM+
Sbjct: 568 NTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVN 627
Query: 343 RGCEPTMHTYIMLLQG 358
+G P TY+ L++G
Sbjct: 628 KGISPDDSTYLSLIEG 643
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 101/223 (45%), Gaps = 3/223 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
++IT+N +++ + N ++ EM + + T+ + L+ +K+ + F
Sbjct: 423 DAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLF 482
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDV 190
+ D G + M N +V C V A L+ ++ + + P+E+ + L++G C
Sbjct: 483 EKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCRE 542
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G + EA + + M G +P + +I + + +A +V M + L T
Sbjct: 543 GKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPT-LLT 601
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
Y +I +CK + A +L+EM +GI D+ T S+I G+
Sbjct: 602 YNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 644
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 147/327 (44%), Gaps = 42/327 (12%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALM-TLAEVRELKKMVNFFHI 133
++F+ ++ + ++R++D ++M + LV D LM + + +
Sbjct: 259 VSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDE 318
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW--------------------- 172
M + GC + N ++ LC+ K++ +A L ++ E
Sbjct: 319 MLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGN 378
Query: 173 ---------------IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDK 217
IKP+ +AY LI G+C VG++ +AS++W+ M P+
Sbjct: 379 MTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGI 438
Query: 218 MIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKR 277
+I + + EA +++ +M K + L T VI C+ G S+A L M +
Sbjct: 439 LINAYCSVGHVSEAFRLWDVMIEKGIKPT-LVTCNTVIKGYCRSGDSSKADEFLGRMIAK 497
Query: 278 GIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREA 333
G+ D+++ +++I G + + +A+ + ++EK PDI Y+ ++ G R R +EA
Sbjct: 498 GVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEA 557
Query: 334 TQVFREMIKRGCEPTMHTYIMLLQGHL 360
V R+MI++G P TY L+ GH+
Sbjct: 558 ELVLRKMIEKGINPDRSTYTALINGHV 584
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/403 (23%), Positives = 173/403 (42%), Gaps = 56/403 (13%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRE--LKKMVNF 130
N T N MV+ + K D L EM + D L+ A RE L++
Sbjct: 117 NVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIG-AYCREGLLEEAFEI 175
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCD 189
+ M D G + SL N ++ LC++ AK ++++ L+ + P+ Y L+ C
Sbjct: 176 MNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCR 235
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR---------- 239
+ EA +I+ M +G P + +I F + D+A+ F+ M+
Sbjct: 236 RDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVI 295
Query: 240 -----------------VKRMDD-------LGLSTYRIVIDWMCKRGKISQAYTMLEEMF 275
+K D+ L + Y +++ +CK ++ A + +EM
Sbjct: 296 YTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMV 355
Query: 276 KRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAR 331
+RG D T +++I+G G + +A + + KPDI Y+ LI G ++
Sbjct: 356 ERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEME 415
Query: 332 EATQVFREMIKRGCEPTMHTYIMLLQ-----GHLGKRGR-------KGPDP-LVNFDTIF 378
+A++++ MI R P TY +L+ GH+ + R KG P LV +T+
Sbjct: 416 KASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTV- 474
Query: 379 VGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEE 421
+ G ++G S A +++ R++ +GV YN ++ + E+
Sbjct: 475 IKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVRED 517
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 160/350 (45%), Gaps = 23/350 (6%)
Query: 90 IDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNK 148
++L WE +E+ R + +N T I + L + + + +F M G + N
Sbjct: 99 VELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNT 158
Query: 149 VVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEG 207
++ C+ L+ EA ++ +++ +KP+ Y +I G C G A I M + G
Sbjct: 159 LIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIG 218
Query: 208 FEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQ 266
P + ++ + + EA ++F +M+R + DL ++ +I + + Q
Sbjct: 219 LSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDL--VSFSSLIAVFSRNRHLDQ 276
Query: 267 AYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP----DISLYHGLIK 322
A +M K G+ DN+ + +++G G + EA K+ +E+ + D+ Y+ ++
Sbjct: 277 ALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILN 336
Query: 323 GLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------------LGKRGRKGPDP 370
GL + + +A ++F EM++RG P +T+ L+ GH G ++ P
Sbjct: 337 GLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKP 396
Query: 371 -LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN 419
+V ++T+ + G K G+ A++ + +++R + Y ++ Y +
Sbjct: 397 DIVAYNTL-IDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCS 445
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 132/291 (45%), Gaps = 23/291 (7%)
Query: 145 MLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
+L + ++ R VVEA L+ + N + + LI+ Y L E ++ + ++
Sbjct: 18 ILRMIRRSGVSRVEVVEA--LVSSMCGNCGTNNLVFDLLIRTYVQARKLREGTEAFRILR 75
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
+G+ SI+ + ++ KI+ + A +V + + V+ +L + T I+++ +CK GK
Sbjct: 76 SKGYLVSINACNSLLGGLVKIDWVELAWEVHREV-VRSGIELNVYTLNIMVNALCKDGKF 134
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGL 320
+ L EM GI AD +T +++I G L EA++++ + KP + Y+ +
Sbjct: 135 DDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAI 194
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL------------QGHLGKRGRKGP 368
I GL + R A + EM+ G P TY LL + G+ R+G
Sbjct: 195 INGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGV 254
Query: 369 DP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP-RFDYNKFLHYY 417
P LV+F ++ + + LD A R M + VP Y +H Y
Sbjct: 255 VPDLVSFSSLI--AVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGY 303
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 111/236 (47%), Gaps = 12/236 (5%)
Query: 54 RPVYLFFQYTQK-AQPCFAHNSITFNRMVD---IIGKSRNIDLFWETLQEMGRRRLVNDK 109
+ + LF TQ+ +P + + +N ++D +G+ W+ + + R+ N
Sbjct: 381 KALSLFGTMTQRNIKP----DIVAYNTLIDGFCKVGEMEKASELWDGM--ISRKIFPNHI 434
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILK 168
T+ I + V + + + +M + G + +L N V+K C+ +A ++L
Sbjct: 435 TYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRM 494
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
+++ + P+ I+Y LI G+ ++ +A N M EG P I + ++ F + +
Sbjct: 495 IAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRM 554
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNL 284
EA V + M +++ + STY +I+ + +++A+ +EM +RG D++
Sbjct: 555 QEAELVLRKM-IEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDDV 609
>gi|18396782|ref|NP_566222.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|79312733|ref|NP_001030630.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546763|sp|Q9M8W9.2|PP211_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04130, mitochondrial; Flags: Precursor
gi|332640519|gb|AEE74040.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332640520|gb|AEE74041.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 508
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 173/389 (44%), Gaps = 38/389 (9%)
Query: 25 RLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDII 84
RL S NL+ ++ + F WR ++ + + H+S ++ VDI+
Sbjct: 73 RLSSDEICKRVNLSDGLVHKLLHRFRDDWRSALGILKWAESCKG-HKHSSDAYDMAVDIL 131
Query: 85 GKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLE 144
GK++ D E ++ M +LV T + A E ++ V F + + G E + E
Sbjct: 132 GKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTE 191
Query: 145 MLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNL-- 202
+N ++ TLC+ K V +A+ ++L+L I PN + I G+C + EA +W +
Sbjct: 192 SMNLLLDTLCKEKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEA--LWTIQE 249
Query: 203 MTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWM 258
M GF P + +I + + E +KV++M+ M+ G TY ++ +
Sbjct: 250 MKGHGFRPCVISYTTIIRCYC---QQFEFIKVYEML--SEMEANGSPPNSITYTTIMSSL 304
Query: 259 CKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDI---- 314
+ + +A + M + G + D+L + +I+ L GRL EA +V +E P++
Sbjct: 305 NAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVF-RVEMPELGVSI 363
Query: 315 --SLYHGLIKGLLRLRRAREATQVFREMIKRG-CEPTMHTYIMLLQGHLGKRGRKGPDPL 371
S Y+ +I +A ++ +EM C P +HTY LL+ KRG
Sbjct: 364 NTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCF-KRG------- 415
Query: 372 VNFDTIFVGGLVKA-----GKSLDAAKYV 395
D + VG L+K SLD + Y
Sbjct: 416 ---DVVEVGKLLKEMVTKHHLSLDESTYT 441
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 70/147 (47%), Gaps = 2/147 (1%)
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNL-MTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
KP+ + Y LI G L EA +++ + M + G + + MI + +++D+A+
Sbjct: 326 KPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAI 385
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMF-KRGIEADNLTLSSIIY 291
++ + M + + + TY+ ++ KRG + + +L+EM K + D T + +I
Sbjct: 386 ELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQ 445
Query: 292 GLLARGRLREAYKVVEEIEKPDISLYH 318
L AY + EE+ DI+ H
Sbjct: 446 RLCRANMCEWAYCLFEEMISQDITPRH 472
Score = 41.6 bits (96), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 73/176 (41%), Gaps = 3/176 (1%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
N T+ + +L +E ++ + M GC+ N ++ TL + + EA+ +
Sbjct: 293 NSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVF 352
Query: 167 -LKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGF-EPSIDVVDKMIETFF 223
+++ E + N Y +I YC + +A ++ M P + ++ + F
Sbjct: 353 RVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCF 412
Query: 224 KINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGI 279
K E K+ + M K L STY +I +C+ AY + EEM + I
Sbjct: 413 KRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDI 468
>gi|255562047|ref|XP_002522032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538836|gb|EEF40436.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 451
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 182/416 (43%), Gaps = 39/416 (9%)
Query: 8 LVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQ 67
L+ T + ++ + PE +L+ N +T E ++ S FF +++
Sbjct: 43 LIHHITNIVRRDFYPER----TLNKLNAPVTSELVFRVLRACSRSPTESLRFFNWSRAY- 97
Query: 68 PCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRE---- 123
+ SI + ++ I+ KS+ W+ + +M + + F I+ T+ + E
Sbjct: 98 --YTPTSIEYEELIKILAKSKRYSSMWKLITQMKDQ----NPQFSISSETVRSIIEEYGR 151
Query: 124 ---LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIA 179
+ + V F+ N CE ++++ N ++ LC+ KL A L+ +L + + PN+
Sbjct: 152 SGLIDQAVEVFNQCNSLNCEQNVDIYNSLLFALCEVKLFHGAYALVRRLIRKGLAPNKTT 211
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK-VFQMM 238
Y L+ G+C G EA M+ +GF P + D +IE + A + VF+M
Sbjct: 212 YSVLVNGWCSNGKFKEAQLFLEEMSKKGFNPPVRGRDLLIEGLLNAGYFESAKEMVFKMS 271
Query: 239 RVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR 298
+ + D ++T+ +I+ +C G++ M + K G D + +I + G+
Sbjct: 272 KEGFVPD--VNTFNCLIEAICNSGEVDFCVDMYYSLRKLGFCPDINSYKILIPAVSKVGK 329
Query: 299 LREAYKV----VEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIM 354
+ EA+K+ +E+ KP LY +IKG+ R + +A F EM +G P Y M
Sbjct: 330 IDEAFKLLNNSIEDGHKPFPGLYAPIIKGMCRRGQFDDAFCFFGEMKVKGHPPNRPVYTM 389
Query: 355 LLQ------------GHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERV 398
L+ +L + G P+ + GL GK D AK +E++
Sbjct: 390 LITMCGRGGKYVEAANYLVEMTEMGLTPISRCFDMVTDGLKNCGKH-DLAKRIEQL 444
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 42/207 (20%), Positives = 85/207 (41%), Gaps = 18/207 (8%)
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRG--IEADNLTLSSIIYGLLARGRLREAYKVVEE 308
Y +I + K + S + ++ +M + + T+ SII G + +A +V +
Sbjct: 105 YEELIKILAKSKRYSSMWKLITQMKDQNPQFSISSETVRSIIEEYGRSGLIDQAVEVFNQ 164
Query: 309 IE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG------ 358
+ ++ +Y+ L+ L ++ A + R +I++G P TY +L+ G
Sbjct: 165 CNSLNCEQNVDIYNSLLFALCEVKLFHGAYALVRRLIRKGLAPNKTTYSVLVNGWCSNGK 224
Query: 359 ------HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNK 412
L + +KG +P V + + GL+ AG A + V ++ G +N
Sbjct: 225 FKEAQLFLEEMSKKGFNPPVRGRDLLIEGLLNAGYFESAKEMVFKMSKEGFVPDVNTFNC 284
Query: 413 FLHYYSNEEGVVMFEEVGKKLREVGLA 439
+ N V ++ LR++G
Sbjct: 285 LIEAICNSGEVDFCVDMYYSLRKLGFC 311
>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
Length = 382
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 135/283 (47%), Gaps = 4/283 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N+ T+N +VD + K +D + E +R D T+ + L ++ + + + F
Sbjct: 81 NAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEALATF 140
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDV 190
M + G +L N ++ LC+ + + +A + ++ + PN + Y +I G C
Sbjct: 141 TQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKS 200
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
L EA ++ + M EG P + ++ F + D A+ + + M V + + T
Sbjct: 201 DQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRM-VSQGCIPDVVT 259
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y +VID +CK G++ A+ + E+ + +T S++I G R+ E KV+ E+
Sbjct: 260 YTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREMA 319
Query: 311 -KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
+P++ Y+ +I GL + R EA +FREM + G P TY
Sbjct: 320 CRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTY 362
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 114/227 (50%), Gaps = 6/227 (2%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEA 196
GC + N +V LC++ + A+ +I + + P+ + Y L+ +G + EA
Sbjct: 77 GCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEA 136
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVID 256
+ MT+EG+ P++ + +I + + +A++VF M + R L TY +VID
Sbjct: 137 LATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEM-IDRDFHPNLVTYSVVID 195
Query: 257 WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY----KVVEEIEKP 312
+CK ++ +A +L+ M G D + + ++ G A GRL A ++V + P
Sbjct: 196 GLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIP 255
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
D+ Y +I L ++ R +A ++FRE++ C P + TY L+ G+
Sbjct: 256 DVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGY 302
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 114/249 (45%), Gaps = 17/249 (6%)
Query: 171 EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGF-EPSIDVVDKMIETFFKINKDD 229
E ++ N+ +++G C G + +A + ++ + +P + +I K+ + D
Sbjct: 4 EGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVD 63
Query: 230 EAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSI 289
A +F+ M TY ++D +CK+ ++ A ++ E KR D +T +++
Sbjct: 64 AAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTL 123
Query: 290 IYGLLARGRLREAY----KVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGC 345
+ L GR+ EA ++ EE P + ++ +I GL R RR +A +VF EMI R
Sbjct: 124 MAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDF 183
Query: 346 EPTMHTYIMLLQG------------HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAK 393
P + TY +++ G L + +G P + T V G AG+ A
Sbjct: 184 HPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALG 243
Query: 394 YVERVMNRG 402
+ R++++G
Sbjct: 244 LLRRMVSQG 252
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 144/326 (44%), Gaps = 40/326 (12%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
N++T+N +++I+ ++R I + L MGR L N T+ + + + KK +
Sbjct: 559 NTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVM 618
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDV 190
+ M G +L N ++K C A + L L KP+E +Y LI G+C +
Sbjct: 619 NNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKI 678
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR----------- 239
+ A ++N M D+G P+ +I+ + K K D A + + M+
Sbjct: 679 SKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTY 738
Query: 240 -------------------VKRMDDLGL----STYRIVIDWMCKRGKISQAYTMLEEMFK 276
K M + G+ TY +ID +CK G S A M +M +
Sbjct: 739 NVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIE 798
Query: 277 RGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRARE 332
+G + LT SS+I L G++ EA + E+E+ PD Y +I+ + +
Sbjct: 799 QGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEH 858
Query: 333 ATQVFREMIKRGCEPTMHTYIMLLQG 358
A MIK GC+PT+ TY +L++G
Sbjct: 859 AFNFLGRMIKAGCQPTLWTYGVLIKG 884
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 157/341 (46%), Gaps = 38/341 (11%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
N T+ + L E R +K ++M G ++ N+++K C ++ + K +
Sbjct: 559 NTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYC---ILGDPKKAM 615
Query: 167 LKLSEWIK----PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETF 222
L ++ ++ N + Y +IKGYCD G+ A +I +LM D G +P ++I F
Sbjct: 616 LVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGF 675
Query: 223 FKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRG 278
KI+K + A +F M +DD GL TY +ID CK K+ A ++LE M + G
Sbjct: 676 CKISKMESAFGLFNEM----VDD-GLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSG 730
Query: 279 IEADNLTLSSIIYGLLARGRLREAYKV----VEEIEKPDISLYHGLIKGLLRLRRAREAT 334
+ T + +I+GL + A ++ +EE P++ Y +I GL + A
Sbjct: 731 CRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLAL 790
Query: 335 QVFREMIKRGCEPTMHTYIMLLQGHLGKRG-------------RKG--PDPLVNFDTIFV 379
++F +MI++GC P + TY L++ LG+ G R G PD + I
Sbjct: 791 EMFNKMIEQGCLPNLLTYSSLIRA-LGQEGKVEEAENLFAELERHGLIPDEITYVKMI-- 847
Query: 380 GGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE 420
+ +GK A ++ R++ G + + Y + NE
Sbjct: 848 EAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNE 888
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 151/395 (38%), Gaps = 60/395 (15%)
Query: 63 TQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVR 122
++ QP N + +N +++ + K N+ ++++ + D TF M L R
Sbjct: 378 SEGVQP----NLLIYNAVINALCKDGNVADAETIMKKVFESEMSPD-TFTYTSMILGHCR 432
Query: 123 --ELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL----------- 169
+L + F+ M GCE + + ++ LC V EA LI ++
Sbjct: 433 KHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 492
Query: 170 ---------------SEW----------IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
W +PN Y LI G C G L A +++ M+
Sbjct: 493 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMS 552
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
+G P+ + +I + + A V +M + + TY +I C G
Sbjct: 553 RDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFT-NIVTYNEMIKGYCILGDP 611
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGL 320
+A ++ M +RG A+ +T ++II G G A ++++ + KPD Y L
Sbjct: 612 KKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTEL 671
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------------LGKRGRKGP 368
I G ++ + A +F EM+ G P TY L+ G+ L R G
Sbjct: 672 ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGC 731
Query: 369 DPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
P V + + GL K A + + ++ G+
Sbjct: 732 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGI 766
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 88/193 (45%), Gaps = 5/193 (2%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
LSE ++PN + Y +I C G++ +A I + + P MI + +
Sbjct: 377 LSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDL 436
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
D A++VF M K + TY +I+ +C G++++A+ ++ EM GI T +
Sbjct: 437 DSALQVFNQM-AKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTG 495
Query: 289 IIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
I L G +A+++ +++ +P++ Y LI GL + A +F M + G
Sbjct: 496 PIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDG 555
Query: 345 CEPTMHTYIMLLQ 357
P TY L+
Sbjct: 556 VFPNTVTYNALIN 568
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 5/163 (3%)
Query: 200 WNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMC 259
++ M EG +P++ + + +I K +A + + + M TY +I C
Sbjct: 373 YHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTF-TYTSMILGHC 431
Query: 260 KRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDIS 315
++ + A + +M K G E + +T S++I GL GR+ EA+ ++ E+ P
Sbjct: 432 RKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAH 491
Query: 316 LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
G I L + +A ++F +M +GCEP ++TY L+ G
Sbjct: 492 TCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISG 534
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 72/186 (38%), Gaps = 18/186 (9%)
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA--- 302
+GL Y ++ + + G + M G++ + L +++I L G + +A
Sbjct: 348 MGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETI 407
Query: 303 -YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG 361
KV E PD Y +I G R A QVF +M K GCEP TY L+ G L
Sbjct: 408 MKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLING-LC 466
Query: 362 KRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRF 408
GR G P + T + L G DA + + N+G E +
Sbjct: 467 DSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVY 526
Query: 409 DYNKFL 414
Y +
Sbjct: 527 TYTALI 532
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 135/358 (37%), Gaps = 47/358 (13%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
N +T+ ++D K +D L+ M R N +T+ + + L +
Sbjct: 699 NEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELC 758
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
+M + G ++ ++ LC+ A + K+ E PN + Y LI+
Sbjct: 759 KVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQE 818
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G + EA ++ + G P KMIE + K + A M +K L T
Sbjct: 819 GKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRM-IKAGCQPTLWT 877
Query: 251 YRIVIDWM--------------------CKRGKISQAYTMLEEMFKRGIEAD-NLTL--- 286
Y ++I + C G + + M + E D L++
Sbjct: 878 YGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQ 937
Query: 287 SSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIK 342
++++ L GR EA +++ + PD Y+ L+ LLR+R A VF+ M
Sbjct: 938 NALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMST 997
Query: 343 RGCEPTMHTY----IMLLQGHLGKRGRK----------GPDPLVNFDTIFVGGLVKAG 386
+GCE ++ Y L Q H K R PD +V + + GL++ G
Sbjct: 998 QGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQ--AVLIDGLLRDG 1053
>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 153/332 (46%), Gaps = 49/332 (14%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDL--FWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKK 126
FA N +N + + G RN++ L+EM R L+ D ++ + E +EL+K
Sbjct: 138 FAFN--VYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195
Query: 127 MVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-------KYLILK----------- 168
+ + M GC +SL ++ C+ + EA K++ L+
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255
Query: 169 ------------------LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEP 210
L P I Y LI+G+C +G L EAS+I+ M + G P
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRP 315
Query: 211 SIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTM 270
++ +I+ + K EA+++ +M +++ ++ TY I+I+ +CK G ++ A +
Sbjct: 316 NVYTYTGLIDGLCGVGKTKEALQLLNLM-IEKDEEPNAVTYNIIINKLCKDGLVADAVEI 374
Query: 271 LEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV------EEIEKPDISLYHGLIKGL 324
+E M KR DN+T + ++ GL A+G L EA K++ PD+ Y+ LI GL
Sbjct: 375 VELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGL 434
Query: 325 LRLRRAREATQVFREMIKR-GCEPTMHTYIML 355
+ R +A ++ ++++ G + T I+L
Sbjct: 435 CKENRLHQALDIYDLLVEKLGAGDRVTTNILL 466
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 117/266 (43%), Gaps = 17/266 (6%)
Query: 165 LILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFK 224
L L L N + L+KG C + +A + M P + + +I F +
Sbjct: 130 LALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCE 189
Query: 225 INKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNL 284
+ ++A+++ M+ L T+ I+ID CK GK+ +A L+EM G+EAD +
Sbjct: 190 GKELEKALELANEMKGSGCS-WSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLV 248
Query: 285 TLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREM 340
+S+I G G L + +E+ + P Y+ LI+G +L + +EA+++F M
Sbjct: 249 VYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFM 308
Query: 341 IKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFD------------TIFVGGLVKAGKS 388
I+RG P ++TY L+ G G K L+N I + L K G
Sbjct: 309 IERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLV 368
Query: 389 LDAAKYVERVMNRGVEVPRFDYNKFL 414
DA + VE + R YN L
Sbjct: 369 ADAVEIVELMKKRRTRPDNITYNILL 394
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 128/286 (44%), Gaps = 9/286 (3%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N++T+N +++ + K + E ++ M +RR D T+ I L L +L +
Sbjct: 351 NAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLL 410
Query: 132 HIM--NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNE-IAYGWLIKGYC 188
++M + + + N ++ LC+ + +A + L E + + + L+
Sbjct: 411 YLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTL 470
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
GD+ +A ++W ++D + D MI+ F K + A + MRV + +
Sbjct: 471 KAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQP-SV 529
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
Y ++ +CK G + QA+ + EEM + D ++ + +I G L G ++ A ++
Sbjct: 530 FDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVG 589
Query: 309 IEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
+ + PD+ Y LI L+L EA F +M+ G EP H
Sbjct: 590 MSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAH 635
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 147/338 (43%), Gaps = 50/338 (14%)
Query: 67 QPCFAHNSITFNRMVD---IIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRE 123
PC +IT+N ++ +G+ + +E + E G R N T+ + L V +
Sbjct: 279 SPC----AITYNTLIRGFCKLGQLKEASEIFEFMIERGVRP--NVYTYTGLIDGLCGVGK 332
Query: 124 LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGW 182
K+ + ++M + E + N ++ LC+ LV +A ++ L +P+ I Y
Sbjct: 333 TKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNI 392
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVV--DKMIETFFKINKDDEAMKVFQMM-- 238
L+ G C GDL EASK+ LM + DV+ + +I K N+ +A+ ++ ++
Sbjct: 393 LLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVE 452
Query: 239 ------RV----------------------KRMDDLGL----STYRIVIDWMCKRGKISQ 266
RV K++ D + TY +ID CK G ++
Sbjct: 453 KLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNV 512
Query: 267 AYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIK 322
A +L +M ++ + ++ L G L +A+++ EE+++ PD+ ++ +I
Sbjct: 513 AKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMID 572
Query: 323 GLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL 360
G L+ + A + M + G P + TY L+ L
Sbjct: 573 GSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFL 610
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 59/291 (20%), Positives = 130/291 (44%), Gaps = 20/291 (6%)
Query: 36 NLTHEFFLQ-ICNNFPL--SWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKS----R 88
N+T+ L +C L + + +YL + + P + I++N ++ + K +
Sbjct: 387 NITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDP----DVISYNALIHGLCKENRLHQ 442
Query: 89 NIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNK 148
+D++ ++++G V T I L + + ++ K + + ++D + +
Sbjct: 443 ALDIYDLLVEKLGAGDRV---TTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTA 499
Query: 149 VVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEG 207
++ C+ ++ AK L+ K+ ++P+ Y L+ C G L +A +++ M +
Sbjct: 500 MIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDN 559
Query: 208 FEPSIDVVDKMIETFFKIN--KDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKIS 265
P + + MI+ K K E++ V M R DL TY +I+ K G +
Sbjct: 560 NFPDVVSFNIMIDGSLKAGDIKSAESLLV-GMSRAGLSPDL--FTYSKLINRFLKLGYLD 616
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISL 316
+A + ++M G E D S++ +++G + ++V+++ DI L
Sbjct: 617 EAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVL 667
>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
Length = 833
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 161/321 (50%), Gaps = 14/321 (4%)
Query: 90 IDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKV 149
I LF ++E + + T+ I + + L+ F ++ G + + N++
Sbjct: 177 ISLFDRMVRECSDKVAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQL 236
Query: 150 VKTLCQRKLVVEAKYLIL-KLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD-E 206
+K LC K + EA ++L ++ E+ PN ++Y L+KG+C+ EA ++ ++M D +
Sbjct: 237 LKGLCDAKRLDEATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQ 296
Query: 207 GFEPSIDVV--DKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
G DVV + +I FF+ + D+A +F M + R + TY VID +CK +
Sbjct: 297 GLSCPPDVVSYNTVINGFFREGQVDKAYNLFLQM-IDRGIPPDVVTYNTVIDGLCKAQVV 355
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGL 320
+A + ++M +G++ N T + +I+G L+ G+ +E +++EE+ +PD +Y L
Sbjct: 356 DRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALL 415
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDP-LVNFDTIFV 379
+ L + R EA +F +I++G +P I K ++G P +VN+ + +
Sbjct: 416 LDYLCKNGRCTEARNIFDSVIRKGIKP--DAMIDEAVCIFDKMRQQGLSPNVVNYGAL-I 472
Query: 380 GGLVKAGKSLDAAKYVERVMN 400
L K G+ DA +++N
Sbjct: 473 DALCKLGRVDDAILKFNQMIN 493
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 135/305 (44%), Gaps = 51/305 (16%)
Query: 89 NIDLFWETLQEMGRRRLVNDKTFKIALMT-----LAEVRELKKMVNFFHIMNDCGCEYSL 143
N + L ++GR V+D K M L V + +K M D G +
Sbjct: 467 NYGALIDALCKLGR---VDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDV 523
Query: 144 EMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNL 202
+ N ++ LC+ V+EA+ LI L L ++P+ I+Y L+ G+C G EA+K+ ++
Sbjct: 524 VVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDV 583
Query: 203 MTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRG 262
M G +P+ F TY ++ CK
Sbjct: 584 MVSIGLKPN---------EF---------------------------TYNTLLHGYCKAR 607
Query: 263 KISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA----YKVVEEIEKPDISLYH 318
+I AY++L EM G D +T ++I++GL GR EA ++ + D+ Y+
Sbjct: 608 RIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYN 667
Query: 319 GLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIF 378
++ GL + EA ++F+ + +G + + T+ +++ G L K G+K D + F TI
Sbjct: 668 IILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMI-GALLKGGKK-EDAMDLFATIS 725
Query: 379 VGGLV 383
GLV
Sbjct: 726 AYGLV 730
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 132/321 (41%), Gaps = 62/321 (19%)
Query: 123 ELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYG 181
++ K N F M D G + N V+ LC+ ++V AK + + L + +KP+ Y
Sbjct: 319 QVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYN 378
Query: 182 WLIKGYCDVGDLIEASKIWNLMTDEGFEPSI--------------------DVVDKMIET 221
LI GY G E ++ M+ EP ++ D +I
Sbjct: 379 CLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRK 438
Query: 222 FFKINK-DDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIE 280
K + DEA+ +F MR + + + Y +ID +CK G++ A +M
Sbjct: 439 GIKPDAMIDEAVCIFDKMRQQGLSP-NVVNYGALIDALCKLGRVDDAILKFNQMINE--- 494
Query: 281 ADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQV 336
+YGL + +A ++V E+ + D+ +++ L+ L R R EA ++
Sbjct: 495 ---------VYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRL 545
Query: 337 FREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVE 396
M++ G P + +Y L+ GH G++ +AAK ++
Sbjct: 546 IELMLRVGVRPDVISYNTLVDGH-----------------------CLTGRTDEAAKLLD 582
Query: 397 RVMNRGVEVPRFDYNKFLHYY 417
+++ G++ F YN LH Y
Sbjct: 583 VMVSIGLKPNEFTYNTLLHGY 603
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/276 (19%), Positives = 117/276 (42%), Gaps = 13/276 (4%)
Query: 75 ITFNRMVD---IIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFF 131
I++N +VD + G++ + + +G + N+ T+ L + R + +
Sbjct: 559 ISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKP--NEFTYNTLLHGYCKARRIDDAYSLL 616
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL----SEWIKPNEIAYGWLIKGY 187
M G + N ++ L Q EAK L L + ++W + Y ++ G
Sbjct: 617 REMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQW---DMYTYNIILNGL 673
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C + EA K++ + +G + I + MI K K ++AM +F + +
Sbjct: 674 CKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVP-D 732
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
+ TY ++ + + K G + + + M + G ++ L++++ L RG + A +
Sbjct: 733 VETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRAGAYLS 792
Query: 308 EIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
++++ + SL L+ L E Q+ + + ++
Sbjct: 793 KLDEKNFSLEASTASMLISLYSRGEYQQLAKSLPEK 828
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 169/379 (44%), Gaps = 64/379 (16%)
Query: 115 LMTLAEVRELKKMV-NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EW 172
L L+ R++ MV F G ++ E N ++ +L + + EA +L++++ +
Sbjct: 81 LTCLSSKRDMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKG 140
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
P+ ++Y +I GYC VG+L + ++ M +G +P+
Sbjct: 141 CIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPN--------------------- 179
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
L TY +I +CK GK+ + +L EM KRG+ D++ +++I G
Sbjct: 180 ---------------LYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDG 224
Query: 293 LLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
G + AYK+ E+E PD + LI GL + EA ++F EMIK+G EP
Sbjct: 225 FCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPD 284
Query: 349 MHTYIMLLQGH--LGKRGRK----------GPDPLVNFDTIFVGGLVKAGKSLDAAKYVE 396
TY L+ G+ LG+ + G P V T GL K+G+ A + +
Sbjct: 285 EVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLH 344
Query: 397 RVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL-------ADLADIFQRYG 449
+ +G+++ YN ++ ++ ++ ++++E GL L D + + G
Sbjct: 345 EMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTG 404
Query: 450 KKMATRERRR---NRAIEP 465
+ + RE R +R ++P
Sbjct: 405 EMVKARELLREMLDRGLQP 423
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 116/248 (46%), Gaps = 41/248 (16%)
Query: 159 VVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDK 217
VVEA L ++ + +P+E+ Y LI GYC +G++ +A + N M G P++
Sbjct: 266 VVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTA 325
Query: 218 MIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKR 277
+ + K + D A ++ M K + L +STY +++ +CK G I QA ++EEM +
Sbjct: 326 LADGLCKSGELDTANELLHEMCRKGLQ-LNISTYNTIVNGLCKAGNILQAVKLMEEMKEA 384
Query: 278 GIEADNLTLSSII-----------------------------------YGLLARGRLREA 302
G+ D +T ++++ GL G+L +
Sbjct: 385 GLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDG 444
Query: 303 YKVVE-EIEK---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
++++ +EK P+ + Y+ ++K R +T+++R M +G P +TY +L++G
Sbjct: 445 ERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKG 504
Query: 359 HLGKRGRK 366
H R K
Sbjct: 505 HCKARNMK 512
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 128/299 (42%), Gaps = 40/299 (13%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTL 118
FF + Q Q N +T+ + D + KS +D E L EM R+
Sbjct: 305 FFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRK--------------- 349
Query: 119 AEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNE 177
G + ++ N +V LC+ +++A L+ ++ E + P+
Sbjct: 350 -------------------GLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDT 390
Query: 178 IAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQM 237
I Y L+ Y G++++A ++ M D G +P++ + ++ K ++ ++ +
Sbjct: 391 ITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKW 450
Query: 238 MRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
M K + +TY ++ C R + + + M +G+ D+ T + +I G
Sbjct: 451 MLEKGIMP-NAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKAR 509
Query: 298 RLREAY----KVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
++EA+ ++VE+ S Y+ LIKG + ++ EA Q+F EM + G + Y
Sbjct: 510 NMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIY 568
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 91/207 (43%), Gaps = 3/207 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
++IT+ ++D K+ + E L+EM R L TF + + L +L+
Sbjct: 389 DTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLL 448
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRK-LVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDV 190
M + G + N ++K C R + + + ++ + P+ Y LIKG+C
Sbjct: 449 KWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKA 508
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
++ EA + M ++ F + + +I+ FFK K EA ++F+ MR + +
Sbjct: 509 RNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVA-SAEI 567
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKR 277
Y + +D + G + + +E ++
Sbjct: 568 YNLFVDMNYEEGNMETTLELCDEAIEK 594
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 165/368 (44%), Gaps = 21/368 (5%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMV 128
F + ++ N ++ + K ++LFW+ M +++ D T+ + +V +K
Sbjct: 176 FRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAK 235
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGY 187
M + GC +L N ++ LC+ +L+ EA L + + + P+ Y LI G+
Sbjct: 236 RVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGF 295
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C EA + M D G +P + +I+ F + ++A ++ M V +
Sbjct: 296 CMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEM-VACGIEAN 354
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
L + +++ +CK GK+ +A +++EM ++G+E D+ T S +I G + A+++++
Sbjct: 355 LIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLD 414
Query: 308 EIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
E++K P + Y +I GL R + + REM+ G +P Y L+ H K
Sbjct: 415 EMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAH-AKE 473
Query: 364 GR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY 410
GR +G P V + G KA + +A Y+ ++ R + Y
Sbjct: 474 GRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTY 533
Query: 411 NKFLHYYS 418
F+ YS
Sbjct: 534 GAFIDGYS 541
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 140/299 (46%), Gaps = 29/299 (9%)
Query: 147 NKVVKTLCQRKLVVEAK-YLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N ++ C+ K + EA+ YL+ L ++PN YG I GY G++ A + +N M
Sbjct: 499 NSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLS 558
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKIS 265
G P++ + +IE K EA VF+ + +R+ + TY ++I + + GK+
Sbjct: 559 CGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQ-DVQTYSVLIHGLSRNGKMH 617
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLI 321
+A+ + E+ ++G+ + T +S+I G +G + +A +++EE+ PDI Y+ LI
Sbjct: 618 EAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILI 677
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGG 381
GL + A +F ++ RG P TY ++ G+ K +P F
Sbjct: 678 DGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYC-----KSKNPTAAF------- 725
Query: 382 LVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLAD 440
+ +E ++ RGV F YN L++ EE ++ +++ E G A
Sbjct: 726 -----------QLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFAS 773
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 153/354 (43%), Gaps = 48/354 (13%)
Query: 94 WETLQEMGR--RRLVNDKTFKIALMTLAEVRELKKMVNFF----HIMNDCGCEYSLEMLN 147
W+ L E ++L D + L +V + K+++NFF H M + L++L+
Sbjct: 39 WQALMESSDIPKKLNTDIIRSVILQN--QVGDPKRLLNFFYWSQHKMGTSTAQQDLDVLS 96
Query: 148 KVVKTLCQRKLVVEAKYLI-----------LKLSEWIK--------PNEIAYGWLIKGYC 188
+ LC A LI L +K PN + + L+ Y
Sbjct: 97 ALAVNLCNSNWYGPASDLIKCIIRNSDSPLAVLGSIVKCYRSCNGSPNSVIFDMLMDSYR 156
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV-KRMDDLG 247
+G L+EA ++ + F PS+ + ++ K NK + KVF M K + D
Sbjct: 157 KMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPD-- 214
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY---- 303
+ TY +I CK G + A +L EM ++G + NL ++I G L R RL +
Sbjct: 215 VYTYTNMISAHCKVGNVKDAKRVLLEMGEKGC-SPNLVTYNVIIGGLCRARLLDEAIELK 273
Query: 304 -KVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
+V++ PD+ Y LI G +R+REA + EMI G +P TY L+ G + +
Sbjct: 274 RSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQ 333
Query: 363 ----RGRKGPDPLVNFD--------TIFVGGLVKAGKSLDAAKYVERVMNRGVE 404
+ + D +V + G+ KAGK A + ++ +M +GVE
Sbjct: 334 GDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVE 387
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 125/278 (44%), Gaps = 8/278 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N +T+ MVD KS+N ++ L+EM R + D + + L + + +K ++ F
Sbjct: 704 NCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLF 763
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
M + G ++ N +++ C+ + EA +L+ ++ E PN + Y LI C
Sbjct: 764 QEMLEKGFASTVS-FNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKA 822
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G + EA ++W M + P+ ++ + I E +F+ M K ++ + T
Sbjct: 823 GMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKM-T 881
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y ++ID C+ G + +A + +E+ +G+ ++I L + E K++ EI
Sbjct: 882 YYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIG 941
Query: 311 KPDISL----YHGLIKGLLRLRRAREATQVFREMIKRG 344
+ L + +G EA +V R M+K G
Sbjct: 942 ESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFG 979
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/370 (20%), Positives = 151/370 (40%), Gaps = 67/370 (18%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFF 131
N+ T+N ++ K N+D + L+EM + + D T+ I + L + E+++ N F
Sbjct: 634 NAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLF 693
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVG 191
+ G + PN + Y ++ GYC
Sbjct: 694 DDIEGRG----------------------------------LTPNCVTYAAMVDGYCKSK 719
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTY 251
+ A ++ M G P + + ++ K K ++A+ +FQ M K ++
Sbjct: 720 NPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFAST--VSF 777
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK 311
+I+ CK GK+ +A +LEEM ++ +++T +S+I G + EA ++ E+++
Sbjct: 778 NTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQE 837
Query: 312 ----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKG 367
P Y L+ G + E + +F EM+ +G EP TY +++ +
Sbjct: 838 RNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAY-------- 889
Query: 368 PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFE 427
+ G ++A K + ++ +G+ + Y+ + +E F
Sbjct: 890 ---------------CREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEE---FF 931
Query: 428 EVGKKLREVG 437
EV K L E+G
Sbjct: 932 EVLKLLNEIG 941
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 142/292 (48%), Gaps = 7/292 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFF 131
N +T++ +++ + K+ + M +R L D T++ L A L +M
Sbjct: 305 NVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALL 364
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
+M G + + N ++ +++ V +A + K+ + + PN + YG +I C
Sbjct: 365 DLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKS 424
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G + +A + M DEG P+I V +I +K D+A ++ M + R L
Sbjct: 425 GSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEM-LDRGICLNTIF 483
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
+ +ID CK G++ ++ + + M + G++ D +T +++I G G++ EA K++ +
Sbjct: 484 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMV 543
Query: 311 ----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
KPDI Y LI G R+ R +A +F+EM+ G P + TY ++LQG
Sbjct: 544 SVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQG 595
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 143/299 (47%), Gaps = 33/299 (11%)
Query: 149 VVKTLCQRKLVVEAKYLILK-LSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDE 206
++K LC K +A ++L+ ++E P+ +Y L+KG CD EA ++ ++M D+
Sbjct: 133 LLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADD 192
Query: 207 ---GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGK 263
G P + + ++ FFK D+A + M + R + TY +I +CK
Sbjct: 193 RGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEM-LDRGILPDVVTYSSIIAALCKAQA 251
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHG 319
+ +A +L M K G+ D +T +SI++G + G+ +EA ++++ +P++ Y
Sbjct: 252 MDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSS 311
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFV 379
L+ L + R+ EA ++F M KRG EP + TY LLQG+ K
Sbjct: 312 LMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATK----------------- 354
Query: 380 GGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
G LV+ LD ++ G++ +N + Y+ +E V V K+R+ GL
Sbjct: 355 GALVEMHALLDL------MVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGL 407
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/412 (22%), Positives = 170/412 (41%), Gaps = 58/412 (14%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHI 133
+T++ ++ + K++ +D E L M + ++ D T+ L + K+ +
Sbjct: 237 VTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKK 296
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M G E ++ + ++ LC+ EA+ + +++ ++P+ Y L++GY G
Sbjct: 297 MRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGA 356
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
L+E + +LM G +P V + +I + K K D+AM VF MR ++ + Y
Sbjct: 357 LVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNP-NVVCYG 415
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA----------------- 295
VID +CK G + A E+M G+ + + +S+I+GL
Sbjct: 416 TVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDR 475
Query: 296 ------------------RGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREA 333
GR+ E+ K+ + + KPDI Y+ LI G + EA
Sbjct: 476 GICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEA 535
Query: 334 TQVFREMIKRGCEPTMHTYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGG 381
T++ M+ G +P + TY L+ G+ + G P + I + G
Sbjct: 536 TKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQG 595
Query: 382 LVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYS----NEEGVVMFEEV 429
L ++ A + + G ++ YN LH +E + MF+ +
Sbjct: 596 LFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 647
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 162/386 (41%), Gaps = 26/386 (6%)
Query: 55 PVYLFFQYTQKAQPCFAHNSITFNRMVDIIG---KSRNIDLFWETLQEMGRRRL-VNDKT 110
P +Y + A+ + T + +IG ++ +DL + L + ++ V+ T
Sbjct: 70 PAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAIT 129
Query: 111 FKIALMTL-AEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
F L L A+ R M M + GC + N ++K LC EA L+ +
Sbjct: 130 FTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMM 189
Query: 170 SE----WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI 225
++ P+ ++Y ++ G+ GD +A ++ M D G P + +I K
Sbjct: 190 ADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKA 249
Query: 226 NKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
D+AM+V M VK TY ++ C G+ +A L++M G+E + +T
Sbjct: 250 QAMDKAMEVLNTM-VKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVT 308
Query: 286 LSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMI 341
SS++ L GR EA K+ + + K PDI+ Y L++G E + M+
Sbjct: 309 YSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMV 368
Query: 342 KRGCEPTMHTYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSL 389
+ G +P H + +L+ + K + G +P V + L K+G
Sbjct: 369 RNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVD 428
Query: 390 DAAKYVERVMNRGVEVPRFDYNKFLH 415
DA Y E++++ G+ Y +H
Sbjct: 429 DAMLYFEQMIDEGLTPNIIVYTSLIH 454
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 145/327 (44%), Gaps = 12/327 (3%)
Query: 39 HEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNID---LFWE 95
H F + IC + + +++ Q N + + ++D++ KS ++D L++E
Sbjct: 377 HVFNILICA-YAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFE 435
Query: 96 TLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQ 155
+ + G N + + L + K M D G + N ++ + C+
Sbjct: 436 QMIDEGLTP--NIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCK 493
Query: 156 RKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDV 214
V+E++ L L + +KP+ I Y LI G C G + EA+K+ M G +P I
Sbjct: 494 EGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVT 553
Query: 215 VDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEM 274
+I + ++++ D+A+ +F+ M V + TY I++ + + + A + +
Sbjct: 554 YGTLINGYCRVSRMDDALALFKEM-VSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSI 612
Query: 275 FKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISL----YHGLIKGLLRLRRA 330
K G + + T + I++GL EA ++ + + D+ L ++ +I LL+ R
Sbjct: 613 TKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRM 672
Query: 331 REATQVFREMIKRGCEPTMHTYIMLLQ 357
EA +F G P + TY ++ +
Sbjct: 673 DEAKDLFAAHSANGLVPDVRTYSLMAE 699
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 98/222 (44%), Gaps = 6/222 (2%)
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYC 188
F +M G + + N ++ C + EA L+ + S +KP+ + YG LI GYC
Sbjct: 503 LFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYC 562
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
V + +A ++ M G P+I + +++ F + A +++ + K L L
Sbjct: 563 RVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSI-TKSGTQLEL 621
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
STY I++ +CK +A M + + ++ + T + +I LL GR+ EA +
Sbjct: 622 STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAA 681
Query: 309 IEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
PD+ Y + + L+ E +F M + GC
Sbjct: 682 HSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCS 723
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 83/194 (42%), Gaps = 26/194 (13%)
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV--- 306
TY I+I C+ G++ + L + K+G D +T + ++ GL A R +A +V
Sbjct: 94 TYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRR 153
Query: 307 --EEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKR---GCEPTMHTYIMLLQGHLG 361
E PD+ Y+ L+KGL R++EA ++ M G P + +Y +L G
Sbjct: 154 MTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFF- 212
Query: 362 KRGRKG---------------PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
K G PD +V + +I + L KA A + + ++ GV
Sbjct: 213 KEGDSDKAYSTYHEMLDRGILPD-VVTYSSI-IAALCKAQAMDKAMEVLNTMVKNGVMPD 270
Query: 407 RFDYNKFLHYYSNE 420
YN LH Y +
Sbjct: 271 CMTYNSILHGYCSS 284
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 104/461 (22%), Positives = 206/461 (44%), Gaps = 43/461 (9%)
Query: 8 LVRVCTILYQQQYS-------PESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFF 60
LVRVC L + + E + + +CN L+ FL++ N ++W
Sbjct: 163 LVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLS--LFLKL-NRMEMAW------V 213
Query: 61 QYTQKAQPCFAHNSITFNRMVDII---GKSRNIDLFWETLQEMG-RRRLVNDKTFKIALM 116
Y + + + TFN MV+++ GK + F ++ +G + +V+ T
Sbjct: 214 LYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYS 273
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKP 175
+ + +++++ + G E ++ +C+ + EA L K+ E + P
Sbjct: 274 SRGNIEGARRILDAMRVK---GIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVP 330
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
N + Y LI GYC+ GDL A + M +G PS+ + ++ F + EA +
Sbjct: 331 NAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMI 390
Query: 236 QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
+ MR K + + TY I+I+ + G +A+ + EM +GIE ++T +S+IY L
Sbjct: 391 KEMRKKGIIPDAI-TYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSR 449
Query: 296 RGRLREA----YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
R R++EA K++++ PD+ +++ ++ G A + +EM ++ P T
Sbjct: 450 RNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVT 509
Query: 352 YIMLLQGH------------LGKRGRKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERV 398
+ L+QG L + R+G P ++++T+ + G + G DA + + +
Sbjct: 510 FNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTL-ISGYGRRGDIKDAFRVRDEM 568
Query: 399 MNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLA 439
++ G YN + + + EE+ K++ G++
Sbjct: 569 LSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGIS 609
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 121/260 (46%), Gaps = 39/260 (15%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEA 196
G S+ N +V L + EA +I ++ + I P+ I Y LI GY G+ +A
Sbjct: 362 GIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKA 421
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ-------------------- 236
+ N M +G EP+ +I + N+ EA +F+
Sbjct: 422 FDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDG 481
Query: 237 ----------MMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEAD 282
M +K MD + T+ ++ C+ GK+ +A +L+EM +RGI+ D
Sbjct: 482 HCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPD 541
Query: 283 NLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFR 338
+++ +++I G RG +++A++V +E+ P + Y+ LIK L + + A ++ +
Sbjct: 542 HISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLK 601
Query: 339 EMIKRGCEPTMHTYIMLLQG 358
EM+ +G P TY+ L++G
Sbjct: 602 EMVNKGISPDDSTYLSLIEG 621
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 101/223 (45%), Gaps = 3/223 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
++IT+N +++ + N ++ EM + + T+ + L+ +K+ + F
Sbjct: 401 DAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLF 460
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDV 190
+ D G + M N +V C V A L+ ++ + + P+E+ + L++G C
Sbjct: 461 EKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCRE 520
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G + EA + + M G +P + +I + + +A +V M + L T
Sbjct: 521 GKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPT-LLT 579
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
Y +I +CK + A +L+EM +GI D+ T S+I G+
Sbjct: 580 YNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 622
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 168/353 (47%), Gaps = 19/353 (5%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMV 128
F+ N + + ++D K I+ + EMG+ LV N++T+ + + L + K+
Sbjct: 194 FSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGF 253
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGY 187
+ M + G +L N V+ LC+ +A + ++ E + N + Y LI G
Sbjct: 254 EMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGL 313
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C L EA+K+ + M +G P++ + +I+ F + K +A+ + + ++ + +
Sbjct: 314 CREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSP-S 372
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
L TY I++ C++G S A M++EM +RGI+ +T + +I + +A ++
Sbjct: 373 LVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRL 432
Query: 308 EIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH---- 359
+E+ PD+ Y LI G + EA+++F+ M+++ CEP Y ++ G+
Sbjct: 433 SMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEG 492
Query: 360 --------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVE 404
L + K P V + L K KS +A + VE++++ G++
Sbjct: 493 SSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGID 545
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 137/280 (48%), Gaps = 25/280 (8%)
Query: 179 AYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
++G LIKG C+ G++ ++ + +T+ GF P++ + +I+ K + ++A +F
Sbjct: 165 SFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFF-- 222
Query: 239 RVKRMDDLGL----STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
M LGL TY ++I+ + K G Q + M E+M + G+ + T + ++ L
Sbjct: 223 ---EMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLC 279
Query: 295 ARGRLREAYKVVEEIEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
GR ++A++V +E+ + +S Y+ LI GL R + EA +V +M G P +
Sbjct: 280 KDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLI 339
Query: 351 TYIMLLQGH--LGKRGR----------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERV 398
TY L+ G +GK G+ +G P + I V G + G + AAK V+ +
Sbjct: 340 TYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEM 399
Query: 399 MNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
RG++ + Y + ++ + + ++ + E+GL
Sbjct: 400 EERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGL 439
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 91/465 (19%), Positives = 201/465 (43%), Gaps = 19/465 (4%)
Query: 15 LYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNS 74
++ Q ++ S LH S + I N++ S + + F S
Sbjct: 70 IHSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGS 129
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIM 134
FN ++ + S + + +W E + +++ +F I + E E++K + +
Sbjct: 130 NCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIEL 189
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDL 193
+ G ++ + ++ C++ + +AK L ++ + + NE Y LI G G
Sbjct: 190 TEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVK 249
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
+ +++ M ++G P++ + ++ K + +A +VF MR +R + TY
Sbjct: 250 KQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMR-ERGVSCNIVTYNT 308
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE--- 310
+I +C+ K+++A ++++M GI + +T +++I G G+L +A + +++
Sbjct: 309 LIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRG 368
Query: 311 -KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK--- 366
P + Y+ L+ G R A ++ +EM +RG +P+ TY +L+ +
Sbjct: 369 LSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAI 428
Query: 367 ---------GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
G P V+ ++ + G G+ +A++ + ++ + E YN + Y
Sbjct: 429 QLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGY 488
Query: 418 SNEEGVVMFEEVGKKLREVGLADLADIFQRYGKKMATRERRRNRA 462
E ++ K++ E LA + RY ++ +ER+ A
Sbjct: 489 CKEGSSYRALKLLKEMEEKELAPNVASY-RYMIEVLCKERKSKEA 532
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 133/294 (45%), Gaps = 41/294 (13%)
Query: 94 WETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTL 153
+E +QE G N T+ + L + K F M + G ++ N ++ L
Sbjct: 256 YEKMQEDGV--FPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGL 313
Query: 154 CQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSI 212
C+ + EA ++ ++ S+ I PN I Y LI G+C VG L +A + + G PS+
Sbjct: 314 CREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSL 373
Query: 213 DVVDKMIETFFKINKDDEAMKVFQMMRVK------------------------------R 242
+ ++ F + A K+ + M +
Sbjct: 374 VTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLS 433
Query: 243 MDDLGL----STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR 298
M++LGL TY ++I C +G++++A + + M ++ E + + +++I G G
Sbjct: 434 MEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGS 493
Query: 299 LREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
A K+++E+E+ P+++ Y +I+ L + R+++EA ++ +MI G +P+
Sbjct: 494 SYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPS 547
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+ Y LI G+C G + EAS+++ M ++ EP+ + + MI + K A+K+
Sbjct: 441 PDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKL 500
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSI 289
+ M K + +++YR +I+ +CK K +A ++E+M GI+ LS I
Sbjct: 501 LKEMEEKELAP-NVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
>gi|7413543|emb|CAB86023.1| putative protein [Arabidopsis thaliana]
Length = 880
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 137/293 (46%), Gaps = 8/293 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGR-RRLVNDKTFKIALMTLAEVRELKKMVNFFHI 133
I +N ++ N+D +T++EM + R +TF + A+ ++++ + F +
Sbjct: 555 ILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDM 614
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDL 193
M CGC ++ N ++ L +++ VE L + NE Y +++GY VGD
Sbjct: 615 MRRCGCVPTVHTFNGLINGLVEKRQAVE--ILDEMTLAGVSANEHTYTKIMQGYASVGDT 672
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
+A + + + +EG + I + +++ K + A+ V + M + + Y I
Sbjct: 673 GKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSF-VYNI 731
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE--- 310
+ID +RG + +A ++++M K G++ D T +S I G + A + +EE+E
Sbjct: 732 LIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALG 791
Query: 311 -KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
KP+I Y LIKG R +A + EM G +P Y LL L +
Sbjct: 792 VKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSR 844
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 103/244 (42%), Gaps = 31/244 (12%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P + YG LI Y VG + +A ++ +M +EG + ++ MI F K+ A V
Sbjct: 482 PTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAV 541
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
F+ M VK + Y +I C G + +A ++EM K T II+G
Sbjct: 542 FEDM-VKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYA 600
Query: 295 ARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
G +R + +V + + + P + ++GLI GL+ R+A ++ EM G H
Sbjct: 601 KSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLV---EKRQAVEILDEMTLAGVSANEH 657
Query: 351 TYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY 410
TY ++QG+ G + A +Y R+ N G++V F Y
Sbjct: 658 TYTKIMQGY-----------------------ASVGDTGKAFEYFTRLQNEGLDVDIFTY 694
Query: 411 NKFL 414
L
Sbjct: 695 EALL 698
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 138/315 (43%), Gaps = 27/315 (8%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK- 168
T+ + +V ++ K + +M + G +++L+ + ++ + K A + + +
Sbjct: 486 TYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANA-FAVFED 544
Query: 169 -LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINK 227
+ E +KP+ I Y +I +C +G++ A + M P+ +I + K
Sbjct: 545 MVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGD 604
Query: 228 DDEAMKVFQMMRVKRMDDL-GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTL 286
+++VF MMR R + + T+ +I+ + ++ QA +L+EM G+ A+ T
Sbjct: 605 MRRSLEVFDMMR--RCGCVPTVHTFNGLINGLVEK---RQAVEILDEMTLAGVSANEHTY 659
Query: 287 SSIIYGLLARGRLREAYKVVEEIEKP----DISLYHGLIKGLLRLRRAREATQVFREMIK 342
+ I+ G + G +A++ ++ DI Y L+K + R + A V +EM
Sbjct: 660 TKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSA 719
Query: 343 RGCEPTMHTYIMLLQGHLGKRG-------------RKGPDPLVNFDTIFVGGLVKAGKSL 389
R Y +L+ G +RG ++G P ++ T F+ KAG
Sbjct: 720 RNIPRNSFVYNILIDG-WARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMN 778
Query: 390 DAAKYVERVMNRGVE 404
A + +E + GV+
Sbjct: 779 RATQTIEEMEALGVK 793
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 98/234 (41%), Gaps = 14/234 (5%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIM 134
TFN +++ + + R E L EM + N+ T+ + A V + K +F +
Sbjct: 626 TFNGLINGLVEKRQA---VEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRL 682
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKP-NEIAYGWLIKGYCDVGDL 193
+ G + + ++K C+ + A + ++S P N Y LI G+ GD+
Sbjct: 683 QNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDV 742
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG----LS 249
EA+ + M EG +P I I K + A + ++ M+ LG +
Sbjct: 743 WEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQT-----IEEMEALGVKPNIK 797
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
TY +I + +A + EEM GI+ D ++ LL+R + EAY
Sbjct: 798 TYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAY 851
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 86/189 (45%), Gaps = 7/189 (3%)
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
KP+ +G ++K Y GD+ A + + M G P+ + +I + DEA+
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALS 365
Query: 234 VFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTL-SSIIYG 292
+ M+ + + ++ L TY +++ K G A +E KR + N ++ IIY
Sbjct: 366 CVRKMKEEGI-EMSLVTYSVIVGGFSKAGHAEAADYWFDEA-KRIHKTLNASIYGKIIYA 423
Query: 293 LLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
+ A +V E+E+ I++YH ++ G + ++ VF+ + + G PT
Sbjct: 424 HCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPT 483
Query: 349 MHTYIMLLQ 357
+ TY L+
Sbjct: 484 VVTYGCLIN 492
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 160/353 (45%), Gaps = 32/353 (9%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND----KTFKIALMTLAEVRELKKMVNF 130
+ +N ++D K++ +D +E+ + LV + L + +KK+++
Sbjct: 336 LNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDE 395
Query: 131 FHIMNDCGCEYSLEML--NKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGY 187
H G +++ N ++ LC+ ++EA L++ + + +KPN + Y ++ GY
Sbjct: 396 MH-----GSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGY 450
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C ++ A I+N M G EP I + +I + K DEA+ +F+ MR K +
Sbjct: 451 CLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIP-D 509
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
+++Y +ID +C G+I +L+EM G D +T + ++ +A +
Sbjct: 510 IASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFR 569
Query: 308 EIEK---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
+I + PD H ++ L + + + A + ++ GC P + TY +L+ L K G
Sbjct: 570 QIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINA-LCKDG 628
Query: 365 RKG--------------PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
G P + F+ I +G L++ ++ A K E ++ RG+
Sbjct: 629 SFGEAMLLLSKMEDNDRPPDAITFE-IIIGVLLQRNETDKAEKLREEMIARGL 680
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 115/219 (52%), Gaps = 6/219 (2%)
Query: 146 LNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
N ++ LC+ ++EA+ ++ +S+ KP+ + Y L++GYC ++ EA +++N M
Sbjct: 268 FNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMV 327
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
G EP + + +I+ + K DEAM +F+ + K + +++Y +ID +C G+I
Sbjct: 328 KRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPT-IASYNSLIDGLCNSGRI 386
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV----EEIEKPDISLYHGL 320
S +L+EM D +T + +I L GR+ EA V+ ++ KP+I Y+ +
Sbjct: 387 SHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAM 446
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
+ G A +F M+K G EP + Y +L+ G+
Sbjct: 447 MDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGY 485
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 108/457 (23%), Positives = 190/457 (41%), Gaps = 78/457 (17%)
Query: 6 GHLVRVCTILYQQQ---YSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQY 62
GH ++ Q Q SP + L +C F+ +H F S L Y
Sbjct: 69 GHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSH-------TAFAFSLLATILKSGY 121
Query: 63 TQKAQPCFAHNSITFNRMVD---IIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLA 119
QP N +TFN +++ I G F + L G L + T+ + L+
Sbjct: 122 ----QP----NLVTFNTIINGFCINGMIFKALDFCQNLLAQGY--LFDQFTYGTLINGLS 171
Query: 120 EVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEI 178
+ ++K ++ M + +L M + ++ LC+ V +A L ++ E I + +
Sbjct: 172 KNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAV 231
Query: 179 AYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
Y LI G C VG E +++ M E +P
Sbjct: 232 TYNSLIDGCCSVGRWQEVTQLLTKMVRENVDP---------------------------- 263
Query: 239 RVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR 298
DD T+ I+ID +CK G+I +A +L M KRG + D +T ++++ G +R
Sbjct: 264 -----DDY---TFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSREN 315
Query: 299 LREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIM 354
+ EA ++ + K PD+ Y+ LI G + + EA +F+E+ + PT+ +Y
Sbjct: 316 VHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNS 375
Query: 355 LLQG--------HLGK-----RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNR 401
L+ G H+ K G P +V ++ I + L K G+ L+A + +M +
Sbjct: 376 LIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYN-ILIDALCKEGRILEALGVLVMMMKK 434
Query: 402 GVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
GV+ YN + Y V + +++ ++ + GL
Sbjct: 435 GVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGL 471
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 140/299 (46%), Gaps = 8/299 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
+++T+N ++D + L +M R + +D TF I + L + + +
Sbjct: 229 DAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVL 288
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
+M+ G + + N +++ C R+ V EA+ L ++ + ++P+ + Y LI GYC
Sbjct: 289 AMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKT 348
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
+ EA ++ + ++ P+I + +I+ + K+ M + T
Sbjct: 349 KMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMH-GSAQPPDVVT 407
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y I+ID +CK G+I +A +L M K+G++ + +T ++++ G R + A + +
Sbjct: 408 YNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMV 467
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
K PDI Y+ LI G + EA +F+EM + P + +Y L+ G L GR
Sbjct: 468 KSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDG-LCNLGR 525
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 116/280 (41%), Gaps = 17/280 (6%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P + L+ +G A ++ + +G PSI +I +F + A +
Sbjct: 53 PPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSL 112
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
+ +K L T+ +I+ C G I +A + + +G D T ++I GL
Sbjct: 113 LATI-LKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLS 171
Query: 295 ARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
G+++ A +++E+EK P++ +Y LI GL + +A + ++ +RG
Sbjct: 172 KNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAV 231
Query: 351 TYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERV 398
TY L+ G L K R+ DP I + L K G+ L+A + +
Sbjct: 232 TYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMM 291
Query: 399 MNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
RG + YN + Y + E V E+ ++ + GL
Sbjct: 292 SKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGL 331
>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
Length = 621
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 155/361 (42%), Gaps = 51/361 (14%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQR-KLVVEAKYLILK 168
T+ L L +++ + F M C + +V LC+ + L
Sbjct: 144 TYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEA 203
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
+S +PN + Y LI GYC+ G++ A K++ M P++ ++I K K
Sbjct: 204 MSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKV 263
Query: 229 DEAMKVFQMM------------------------------RVKRMDDLGLS----TYRIV 254
+ AM +F M + M+ GL T+ ++
Sbjct: 264 ERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVL 323
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA----YKVVEEIE 310
ID +CKR K+ +A L + K+G++ + + +S+I GL G++ A K++ E
Sbjct: 324 IDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGF 383
Query: 311 KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGP-- 368
PD Y LI GL R ++ +AT + +M+++G + + TY +++ + + G +GP
Sbjct: 384 VPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKK 443
Query: 369 ----------DPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYS 418
+P + T+FV + G+ DA + ++++RGV YN + Y+
Sbjct: 444 IFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYA 503
Query: 419 N 419
N
Sbjct: 504 N 504
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 124/322 (38%), Gaps = 53/322 (16%)
Query: 143 LEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNL 202
L LN ++ L + ++ + + L ++ N Y LI YC GD+ A +
Sbjct: 41 LRCLNTLLMALARHRMFPDMESLASRMPAR---NLRTYTTLINAYCLAGDIPAAKQHLTS 97
Query: 203 MTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK--------------------- 241
+ G P + + + A +VF +M ++
Sbjct: 98 LLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGM 157
Query: 242 -----------RMDDLGLST--YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
R D T Y ++ +C+ G+ +A +LEE G E + + ++
Sbjct: 158 VREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNA 217
Query: 289 IIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+I G G + A KV E ++ P++ Y LI GL + + A +F M++ G
Sbjct: 218 LIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAG 277
Query: 345 CEPTMHTYIMLLQGHLGKRGRKGP---------DPLVNFD---TIFVGGLVKAGKSLDAA 392
EP + TY L+QG + + + LV D ++ + L K K +A
Sbjct: 278 LEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQ 337
Query: 393 KYVERVMNRGVEVPRFDYNKFL 414
++ ++ +GV+V Y +
Sbjct: 338 LFLGSLVKKGVKVNEVVYTSLI 359
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 57/288 (19%), Positives = 113/288 (39%), Gaps = 26/288 (9%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N + + ++D + K+ ID E +Q+M V D ++ + L ++L +
Sbjct: 351 NEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLML 410
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK--LSEWIKPNEIAYGWLIKGYCD 189
M + G + S ++ L R++ E I ++ I P+ + Y ++ YC+
Sbjct: 411 EDMMEKGIQASPVTYTIIIDELV-REVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCE 469
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
G + +A + M D G P++ + +I + + +A F++M K
Sbjct: 470 EGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGK-------- 521
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
W +YT+L + + +DN S I+ + L+ + + E
Sbjct: 522 ------GWKPNE----DSYTVLLRLVVKKSSSDN---SVDIWKIADMKDLQVLLEDITER 568
Query: 310 EKP-DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
+ P +Y I+ L R+ R EA F M P+ Y ++
Sbjct: 569 QLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSII 616
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 70/206 (33%), Gaps = 51/206 (24%)
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
RM L TY +I+ C G I A L + G+ D+ +S + G G L
Sbjct: 64 ASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGML 123
Query: 300 REAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
A + VF M RGC T TY LL G
Sbjct: 124 THACR-------------------------------VFVLMPLRGCLRTAFTYTALLHGL 152
Query: 360 LG--------------KRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEV 405
LG + PD V V GL +AG++ +A +E M+ G E
Sbjct: 153 LGAGMVREAMTVFVGMRADSCAPDTHVY--ATMVHGLCEAGRTEEAEVLLEEAMSNGFEP 210
Query: 406 PRFDYNKFLHYYSN----EEGVVMFE 427
YN + Y N E + +FE
Sbjct: 211 NIVVYNALIDGYCNAGEMEHALKVFE 236
>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
Length = 454
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 161/362 (44%), Gaps = 25/362 (6%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
+++T+N ++ + K++ +D E L M + N T+ + + +K + F
Sbjct: 45 DAVTYNSIIAALSKAQAMDRAMEVLTVM---VMPNCFTYNSIMHGYCSSGQSEKAIGIFR 101
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVG 191
M G E + N ++ LC+ EA+ + + + +KP+ YG L+ GY G
Sbjct: 102 KMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKG 161
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTY 251
L+E + LM G + V + +I + K K DE + VF MR + + ++ Y
Sbjct: 162 ALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVN-Y 220
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE- 310
R VID +CK G++ A E+M +G+ + + +S+I+ L + +A +++ EI
Sbjct: 221 RTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILD 280
Query: 311 ---KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKG 367
P+I ++ ++ L + R E+ ++F + G P + TY L+ G+ G
Sbjct: 281 QGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDG 340
Query: 368 --------------PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
PD V + T+ + G K + DA + + + GV YN
Sbjct: 341 AMKLLTGMVSVGLKPDS-VTYSTL-INGYCKINRMEDALALFKEMESNGVNPDIITYNII 398
Query: 414 LH 415
LH
Sbjct: 399 LH 400
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 140/295 (47%), Gaps = 17/295 (5%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHI 133
+T+N ++D + K+ + M +R L D T+ L A L +M + +
Sbjct: 113 VTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLAL 172
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGD 192
M G + + N ++ +++ V E + K+ + + PN + Y +I G C +G
Sbjct: 173 MVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGR 232
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK-VFQMMRVKRMDDLGLST- 250
L +A + M D+G P++ V +I +K ++A + +F+++ D G++
Sbjct: 233 LDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEIL------DQGINPN 286
Query: 251 ---YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
+ ++D +CK G++ ++ + + + G+ D +T S++I G G++ A K++
Sbjct: 287 IVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLT 346
Query: 308 EIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+ KPD Y LI G ++ R +A +F+EM G P + TY ++L G
Sbjct: 347 GMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHG 401
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/360 (20%), Positives = 145/360 (40%), Gaps = 56/360 (15%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+++N ++D + K ++D + T EM RR+ D T+ + L++ + + + + +
Sbjct: 12 VSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEVLTV 71
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDL 193
M + PN Y ++ GYC G
Sbjct: 72 M--------------------------------------VMPNCFTYNSIMHGYCSSGQS 93
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
+A I+ M +G EP + + +++ K K EA K+F M VKR ++TY
Sbjct: 94 EKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSM-VKRGLKPDITTYGT 152
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK-- 311
++ +G + + + +L M + G++ D+ + +I + ++ E V ++ +
Sbjct: 153 LLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQG 212
Query: 312 --PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG----- 364
P+ Y +I GL +L R +A F +MI +G P + Y L+
Sbjct: 213 LTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAE 272
Query: 365 -------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
+G +P + F + L K G+ +++ K + + + GV Y+ + Y
Sbjct: 273 ELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGY 332
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 112/258 (43%), Gaps = 23/258 (8%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+ ++Y +I G GD+ +A ++ M D P + +I K D AM+V
Sbjct: 9 PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
+M + TY ++ C G+ +A + +M GIE D +T +S++ L
Sbjct: 69 LTVMVMPN-----CFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLC 123
Query: 295 ARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
G+ EA K+ + + KPDI+ Y L+ G E + M++ G + H
Sbjct: 124 KNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHH 183
Query: 351 TYIMLLQGH------------LGKRGRKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVER 397
+ +L+ + K ++G P VN+ T+ + GL K G+ DA E+
Sbjct: 184 VFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTV-IDGLCKLGRLDDAMLNFEQ 242
Query: 398 VMNRGVEVPRFDYNKFLH 415
++++G+ Y +H
Sbjct: 243 MIDKGLTPNVVVYTSLIH 260
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 90/203 (44%), Gaps = 14/203 (6%)
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
+Y +ID + K G + +AY EM R + D +T +SII L + A +V+ +
Sbjct: 13 SYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEVLTVM 72
Query: 310 EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG----- 364
P+ Y+ ++ G ++ +A +FR+M G EP + TY L+ +L K G
Sbjct: 73 VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMD-YLCKNGKCTEA 131
Query: 365 --------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHY 416
++G P + + G G ++ + ++ G+++ +N +
Sbjct: 132 RKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICA 191
Query: 417 YSNEEGVVMFEEVGKKLREVGLA 439
Y+ +E V V K+R+ GL
Sbjct: 192 YTKQEKVDEVVLVFSKMRQQGLT 214
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 101/222 (45%), Gaps = 7/222 (3%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALM-TLAE 120
+++ Q N++ + ++D + K +D ++M + L + +L+ L
Sbjct: 205 FSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCT 264
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIA 179
+ +K + D G ++ N ++ +LC+ V+E+K L L + P+ I
Sbjct: 265 YDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVIT 324
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
Y LI GYC G + A K+ M G +P +I + KIN+ ++A+ +F+ M
Sbjct: 325 YSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEME 384
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEA 281
++ + TY I++ + + + + A +E++ R E+
Sbjct: 385 SNGVNP-DIITYNIILHGLFRTRRTAAA----KELYARITES 421
>gi|356517665|ref|XP_003527507.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Glycine max]
Length = 564
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 131/299 (43%), Gaps = 42/299 (14%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMT 117
FF ++ F + +N M+D+ GK R DL W + M R + + TF +
Sbjct: 164 FFNWSSSLD-GFPASPEPYNEMLDLAGKLRQFDLAWHVIDLMKSRGVEITVHTFSALVRR 222
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNE 177
+ V+ F+ M D GC + + V+ +LC+++ EA+ L +P+
Sbjct: 223 YVRAGLAAEAVHAFNRMEDYGCTPDMVAFSIVISSLCKKRRANEAQSFFDSLKHRFEPDV 282
Query: 178 IAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQM 237
+ Y L+ G+C GD+ +A ++++ M G +P++
Sbjct: 283 VVYTSLVHGWCRAGDISKAEEVFSDMKMAGIKPNV------------------------- 317
Query: 238 MRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
TY IVID +C+ G+I++A+ + EM G + + +T +S++ + G
Sbjct: 318 -----------YTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAG 366
Query: 298 RLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
R + KV ++++ D Y+ +I+ R EA ++ M+K+G P T+
Sbjct: 367 RTEKVLKVYNQMKRLGCPADTISYNFIIESHCRDENLEEAAKILNLMVKKGVAPNASTF 425
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 109/259 (42%), Gaps = 43/259 (16%)
Query: 199 IWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIV 254
+ +LM G E ++ ++ + + EA+ F RM+D G + + IV
Sbjct: 200 VIDLMKSRGVEITVHTFSALVRRYVRAGLAAEAVHAFN-----RMEDYGCTPDMVAFSIV 254
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE---- 310
I +CK+ + ++A + + + K E D + +S+++G G + +A +V +++
Sbjct: 255 ISSLCKKRRANEAQSFFDSL-KHRFEPDVVVYTSLVHGWCRAGDISKAEEVFSDMKMAGI 313
Query: 311 KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDP 370
KP++ Y +I L R + A VF EMI GC+P T+ L++ H
Sbjct: 314 KPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVH----------- 362
Query: 371 LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVG 430
VKAG++ K ++ G YN + + +E + EE
Sbjct: 363 ------------VKAGRTEKVLKVYNQMKRLGCPADTISYNFIIESHCRDENL---EEAA 407
Query: 431 KKLR---EVGLADLADIFQ 446
K L + G+A A F
Sbjct: 408 KILNLMVKKGVAPNASTFN 426
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 106/243 (43%), Gaps = 44/243 (18%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
N T+ I + +L ++ + + F M D GC+ + N +++ + + +
Sbjct: 316 NVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEK----V 371
Query: 167 LKLSEWIK-----PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIET 221
LK+ +K + I+Y ++I+ +C +L EA+KI NLM +G P+ + +
Sbjct: 372 LKVYNQMKRLGCPADTISYNFIIESHCRDENLEEAAKILNLMVKKGVAPNASTFNFIFGC 431
Query: 222 FFKINKDDEAMKVFQMMR------------------------------VKRMDD----LG 247
K++ + A +++ M+ K MD+
Sbjct: 432 IAKLHDVNGAHRMYARMKELNCQPNTLTYNILMRMFAESRSTDMVLKMKKEMDESQVEPN 491
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR-GRLREAYKVV 306
++TYRI+I C + AY ++ EM + NL++ + LL + G+L++ ++V
Sbjct: 492 VNTYRILISMFCDMKHWNNAYKLMMEMVEEKCLRPNLSVYETVLELLRKAGQLKKHEELV 551
Query: 307 EEI 309
+++
Sbjct: 552 DKM 554
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/208 (17%), Positives = 88/208 (42%), Gaps = 2/208 (0%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N++TFN ++ + K+ + + +M R D ++ + + L++
Sbjct: 351 NAVTFNSLMRVHVKAGRTEKVLKVYNQMKRLGCPADTISYNFIIESHCRDENLEEAAKIL 410
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDV 190
++M G + N + + + V A + ++ E +PN + Y L++ + +
Sbjct: 411 NLMVKKGVAPNASTFNFIFGCIAKLHDVNGAHRMYARMKELNCQPNTLTYNILMRMFAES 470
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
K+ M + EP+++ +I F + + A K+ M ++ LS
Sbjct: 471 RSTDMVLKMKKEMDESQVEPNVNTYRILISMFCDMKHWNNAYKLMMEMVEEKCLRPNLSV 530
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRG 278
Y V++ + K G++ + ++++M RG
Sbjct: 531 YETVLELLRKAGQLKKHEELVDKMVARG 558
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 151/345 (43%), Gaps = 56/345 (16%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
N ++++ +++ + S N++L + +M R N TF + +L + ++ +
Sbjct: 278 NVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLW 337
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDV 190
+M GCE ++ N ++ LC + EA + ++ PN Y LI G+
Sbjct: 338 KLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKS 397
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
GDL+ AS+ WN M G P++ T
Sbjct: 398 GDLVGASETWNRMISHGCRPNV------------------------------------VT 421
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y ++D +CK QA +++E+M G + +T ++ I GL GR+ A K++E ++
Sbjct: 422 YTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQ 481
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------- 359
P+I+ Y+ L+ L R+ + EA +F+E+ R +P + TY +L G
Sbjct: 482 GHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMG 541
Query: 360 -----LGKRGRKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERV 398
GK +G P + ++T+ + K GK AA+ VERV
Sbjct: 542 EALQLFGKALVRGTAPDSITYNTM-IHAYCKQGKVKIAAQLVERV 585
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 154/353 (43%), Gaps = 30/353 (8%)
Query: 77 FNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIMN 135
+N ++D + K I++ + L EM + N ++ + +L ++ F M
Sbjct: 247 YNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMF 306
Query: 136 DCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGDLI 194
GC+ ++ ++K R + EA L L + + +PN +AY LI G C G L
Sbjct: 307 LRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLE 366
Query: 195 EASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIV 254
EA ++ + M G P++ +I+ F K A + + M + + TY +
Sbjct: 367 EALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRM-ISHGCRPNVVTYTCM 425
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK--- 311
+D +CK QA +++E+M G + +T ++ I GL GR+ A K++E ++
Sbjct: 426 VDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGC 485
Query: 312 -PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDP 370
P+I+ Y+ L+ L R+ + EA +F+E+ R +P + TY +L G
Sbjct: 486 LPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYG------------ 533
Query: 371 LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGV 423
+AG +A + + + RG YN +H Y + V
Sbjct: 534 -----------FSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKV 575
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 156/353 (44%), Gaps = 28/353 (7%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMV 128
F H + T+ M++ +G+ +D+ LQ+M + + F + V ++ +
Sbjct: 70 FQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQAL 129
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRK--LVVEAKYLILKLSEWIKPNEIAYGWLIKG 186
F+ + + GC+ ++ + N ++ L ++ Y +K + + PN Y L+K
Sbjct: 130 KMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMK-KDGLIPNVFTYNILLKA 188
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
C + A K++ M+++G P M+ + K K D+A ++ +
Sbjct: 189 LCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPS----- 243
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
+ Y +ID MCK G+I A +L EM G++ + ++ S II L G + A+ +
Sbjct: 244 -VPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALF 302
Query: 307 EEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
++ +I + LIKG + EA +++ MI+ GCEP + Y L+ G L
Sbjct: 303 AQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHG-LCS 361
Query: 363 RG-------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
G R G P V +I + G K+G + A++ R+++ G
Sbjct: 362 NGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHG 414
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 141/317 (44%), Gaps = 34/317 (10%)
Query: 122 RELKKMVNFFH-IMNDCGCEYSLEMLNKVVKTL---CQRKLVVEAKYLILKLS-EWIKPN 176
R L ++ FF I N +++ +++ L C+ +V +Y++ ++ + I
Sbjct: 52 RNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMV---QYILQQMKMDGINCC 108
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
E + +I GY VG +A K++ + + G +P++ + + +++ NK FQ
Sbjct: 109 EDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENK-------FQ 161
Query: 237 MMR--VKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
M+ M GL TY I++ +CK ++ A+ + EM +G D +T ++++
Sbjct: 162 MINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMV 221
Query: 291 YGLLARGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
L G++ +A ++ KP + +Y+ LI G+ + R A ++ EM+ G +P +
Sbjct: 222 SSLCKAGKIDDARELAGRF-KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVV 280
Query: 351 TYIMLLQ------------GHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERV 398
+Y ++ + +G D ++ T + G GK +A + +
Sbjct: 281 SYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLM 340
Query: 399 MNRGVEVPRFDYNKFLH 415
+ G E YN +H
Sbjct: 341 IQDGCEPNVVAYNTLIH 357
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 95/222 (42%), Gaps = 6/222 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
N +T+ MVD++ K+ D +++M N TF + L ++ +
Sbjct: 418 NVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLL 477
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
M GC ++ N+++ L + EA L ++ + ++PN + Y ++ G+
Sbjct: 478 ERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRA 537
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL--GL 248
G + EA +++ G P + MI + K K A ++ + RV M + +
Sbjct: 538 GMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVE--RVSSMKEWHPDI 595
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
TY +I C I +A L++ +GI + T ++++
Sbjct: 596 ITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALV 637
>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
Length = 603
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 143/306 (46%), Gaps = 12/306 (3%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMT 117
FFQ + ++P N +FN ++ + ++ L+EM R + N T + L
Sbjct: 118 FFQ-SSISEP----NVSSFNILLRGFAARDDFEVVNALLREMKSRGITSNGATHGVILSA 172
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPN 176
L R+L K V++F+ ++ CE +L +V LC+ V A + ++ + KP+
Sbjct: 173 LCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPD 232
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
IAY LI G G + EA K+ +LM G P+ ++ K + EA+K Q
Sbjct: 233 IIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQ 292
Query: 237 MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR 296
MR +R+ + TY ++ GK+ +A+ ++EEM R D ++ + I L +
Sbjct: 293 EMRRRRLRPR-VDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSI 351
Query: 297 GRLREAYKV----VEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
GR EA KV VE+ KPD+ Y +I + AT V R M K +P + Y
Sbjct: 352 GRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIY 411
Query: 353 IMLLQG 358
M++ G
Sbjct: 412 TMIMDG 417
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 167/391 (42%), Gaps = 34/391 (8%)
Query: 38 THEFFLQ-ICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWET 96
TH L +C L Y K +P T+ +VD + K+ ++ +
Sbjct: 165 THGVILSALCARRDLDKAVSYFNSVSPNKCEPTL----FTYTVLVDGLCKAHKVERACDV 220
Query: 97 LQEMGRRRLVND----KTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKT 152
+EM R+ D + L V E +K+V+ +M G + +V
Sbjct: 221 FEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVD---LMVARGPPPTAVAYTSIVAG 277
Query: 153 LCQRKLVVEAKYLILKLSEWIKPNEI-AYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPS 211
LC+ + EA I ++ + Y +++ GY +G + +A + M D P
Sbjct: 278 LCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPD 337
Query: 212 IDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTML 271
IE + I + +EA KVF+ M V++ + TY I+ID CK G ++ A +L
Sbjct: 338 TISYTMFIEALYSIGRREEAEKVFETM-VEKGCKPDMHTYGIIIDNFCKEGSMAAATHVL 396
Query: 272 EEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRL 327
M K ++ + + I+ G + RL EA ++ + I K P Y+ +I L +L
Sbjct: 397 RLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKL 456
Query: 328 RRAREATQVFREMIKRG--CEPTMHTYIMLLQGHLGKRGRK-------------GPDPLV 372
++ EA ++ REM +R EP++ TY M++ G LGK G + G P
Sbjct: 457 KKMDEALELLREMQRRKEELEPSIVTYSMIIHG-LGKVGMEERAFDLLAEMIDNGVIPDC 515
Query: 373 NFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
T + L AGK A + +E ++ G+
Sbjct: 516 FTYTSLIQTLAGAGKVSRAMELLEEMLKAGI 546
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 133/283 (46%), Gaps = 23/283 (8%)
Query: 170 SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD 229
S I N +G ++ C DL +A +N ++ EP++ +++ K +K +
Sbjct: 156 SRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAHKVE 215
Query: 230 EAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSI 289
A VF+ M +++ + Y +ID + K G++ +A +++ M RG + +SI
Sbjct: 216 RACDVFEEM-IRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSI 274
Query: 290 IYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGC 345
+ GL GR++EA K ++E+ +P + Y ++ G + + + +A V EM R C
Sbjct: 275 VAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDC 334
Query: 346 EPTMHTYIMLLQG--HLGKRG----------RKGPDPLVNFDTIFVGGLVKAGKSLDAAK 393
P +Y M ++ +G+R KG P ++ I + K G S+ AA
Sbjct: 335 APDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEG-SMAAAT 393
Query: 394 YVERVMNRGVEVP-RFDY----NKFLHYYSNEEGVVMFEEVGK 431
+V R+M++ P R+ Y + F+ EE + +++ + K
Sbjct: 394 HVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILK 436
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 98/191 (51%), Gaps = 9/191 (4%)
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
KP+ YG +I +C G + A+ + LM +P+ + +++ F K ++ +EA++
Sbjct: 370 KPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALE 429
Query: 234 VFQMMRVKRMDDLGLS-TYRIVIDWMCKRGKISQAYTMLEEMFKRG--IEADNLTLSSII 290
++Q R+ + L + TY VI+ +CK K+ +A +L EM +R +E +T S II
Sbjct: 430 LYQ--RILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMII 487
Query: 291 YGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
+GL G A+ ++ E+ PD Y LI+ L + A ++ EM+K G
Sbjct: 488 HGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIF 547
Query: 347 PTMHTYIMLLQ 357
P HTY L+Q
Sbjct: 548 PDDHTYGTLVQ 558
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 117/267 (43%), Gaps = 17/267 (6%)
Query: 170 SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD 229
S +PN ++ L++G+ D + + M G + ++ D
Sbjct: 121 SSISEPNVSSFNILLRGFAARDDFEVVNALLREMKSRGITSNGATHGVILSALCARRDLD 180
Query: 230 EAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSI 289
+A+ F + + + L TY +++D +CK K+ +A + EEM ++G + D + SS+
Sbjct: 181 KAVSYFNSVSPNKCEPT-LFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSL 239
Query: 290 IYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGC 345
I GL GR+ EA K+V+ + P Y ++ GL + R +EA + +EM +R
Sbjct: 240 IDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRL 299
Query: 346 EPTMHTYIMLLQGHLG------------KRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAK 393
P + TY ++ G++G + + P T+F+ L G+ +A K
Sbjct: 300 RPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEK 359
Query: 394 YVERVMNRGVEVPRFDYNKFLHYYSNE 420
E ++ +G + Y + + E
Sbjct: 360 VFETMVEKGCKPDMHTYGIIIDNFCKE 386
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 110/257 (42%), Gaps = 45/257 (17%)
Query: 94 WETLQEMGRRRLVNDKT----FKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKV 149
+ ++EM R D F AL ++ E +K+ F M + GC+ + +
Sbjct: 323 FAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKV---FETMVEKGCKPDMHTYGII 379
Query: 150 VKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGF 208
+ C+ + A +++ L +KPN Y ++ G+ L EA +++ + +G
Sbjct: 380 IDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGI 439
Query: 209 EPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR-------------------------- 242
PS + +I K+ K DEA+++ + M+ ++
Sbjct: 440 LPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERA 499
Query: 243 ------MDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
M D G+ TY +I + GK+S+A +LEEM K GI D+ T +++
Sbjct: 500 FDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQ- 558
Query: 293 LLARGRLREAYKVVEEI 309
+L R + A+ +++E+
Sbjct: 559 ILCRSDVDAAWDLLQEM 575
>gi|359491272|ref|XP_003634254.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Vitis vinifera]
Length = 450
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/386 (22%), Positives = 162/386 (41%), Gaps = 47/386 (12%)
Query: 49 FPLSWRP------VYLFFQYTQKA---------QPCFAHNSITFNRMVDIIGKSRNIDLF 93
+P+ W P + L + + KA P +AH S +F+ +DI G+ R+
Sbjct: 61 YPVEWTPNLVDRVLKLLWNHGPKALQFFKSLDYHPTYAHVSSSFDHAIDIAGRLRDYKTL 120
Query: 94 WETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKT 152
W + M RRL N KTF I + + + F M++ GC L N ++
Sbjct: 121 WTLVDRMRTRRLGPNPKTFAIITERYVSAGKPDRAIKIFFSMHEHGCVQDLNSFNTILDV 180
Query: 153 LCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSI 212
LC+ K V A + K+ + L+KG+ G L EA + + M E +
Sbjct: 181 LCKSKRVEMADNKLFKVFRG------RFRILLKGFFRAGQLKEAWEFFLQMKKRKCEIDV 234
Query: 213 DVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLE 272
++ F + +A +VF M + ++TY I +CK+ + A ++ E
Sbjct: 235 VTYTTVVHGFGVAGEVRKAQRVFNEM-IGEGVLPSVATYNAFIQVLCKKDNVENAISVFE 293
Query: 273 EMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLR 328
EM ++G ++ T + +I GL GR+ +A + + ++ +P++ +Y+ +I+
Sbjct: 294 EMLRKGYMPNSTTYNVVIRGLCHVGRMEKAMEFMARMKDDECEPNVQIYNVVIRYFCDAE 353
Query: 329 RAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKS 388
+ VF +M C P + TY +L+ ++ K+
Sbjct: 354 EIEKGLNVFEKMGDADCLPNLDTYNILISAMFVRK--------------------KSDYL 393
Query: 389 LDAAKYVERVMNRGVEVPRFDYNKFL 414
L A K + ++ RG +F +N+ L
Sbjct: 394 LTAGKLLIEMVERGFLPRKFTFNRVL 419
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 8/210 (3%)
Query: 94 WETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKT 152
WE +M +R+ ++ T+ + E++K F+ M G S+ N ++
Sbjct: 219 WEFFLQMKKRKCEIDVVTYTTVVHGFGVAGEVRKAQRVFNEMIGEGVLPSVATYNAFIQV 278
Query: 153 LCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPS 211
LC++ V A + + L + PN Y +I+G C VG + +A + M D+ EP+
Sbjct: 279 LCKKDNVENAISVFEEMLRKGYMPNSTTYNVVIRGLCHVGRMEKAMEFMARMKDDECEPN 338
Query: 212 IDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL-GLSTYRIVIDWMCKRGK---ISQA 267
+ + + +I F + ++ + VF+ M D L L TY I+I M R K + A
Sbjct: 339 VQIYNVVIRYFCDAEEIEKGLNVFEKM--GDADCLPNLDTYNILISAMFVRKKSDYLLTA 396
Query: 268 YTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
+L EM +RG T + ++ GLL G
Sbjct: 397 GKLLIEMVERGFLPRKFTFNRVLDGLLLTG 426
>gi|357451329|ref|XP_003595941.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484989|gb|AES66192.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 472
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 151/310 (48%), Gaps = 22/310 (7%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRN-----IDLFWETLQEMGRRRLVNDK-TFK 112
F ++ K P F+ + T++ ++ KS + + L +TL M + DK T
Sbjct: 124 FLRHMTKTHPSFSPDKSTYHILLTHCCKSTDSKYSTLSLIHQTLNLMVSDGISPDKGTVD 183
Query: 113 IALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW 172
+A+ +L + V ++ C + N +VK LC+ + +
Sbjct: 184 LAVRSLCTADRVDDAVELIKELSSKHCSPDIYSYNFLVKNLCKSRTL-----------SL 232
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
+ PN + Y LI C+ +L EA+++ +++ +EGF+P + + +++ + +++ EA+
Sbjct: 233 VYPNLVTYTILIDNVCNTKNLREATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEAI 292
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
+V+ M+ K ++ L TY +I + K G++S+A +L M ++G D +T +S++ G
Sbjct: 293 EVYNRMKEKGVEP-DLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLMNG 351
Query: 293 LLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
+ +G A ++EE+E P+ Y+ L+ GL + R +A +++ M G +
Sbjct: 352 MCRKGETLAALALLEEMEMKGCSPNTCTYNTLLHGLCKSRMFDKAMELYGAMKSDGLKLD 411
Query: 349 MHTYIMLLQG 358
M +Y ++
Sbjct: 412 MASYATFVRA 421
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 116/272 (42%), Gaps = 36/272 (13%)
Query: 166 ILKLSEWIKPNEIAYGWLIKGYCDVGD-----LIEASKIWNLMTDEGFEPSIDVVDKMIE 220
+ K P++ Y L+ C D L + NLM +G P VD +
Sbjct: 128 MTKTHPSFSPDKSTYHILLTHCCKSTDSKYSTLSLIHQTLNLMVSDGISPDKGTVDLAVR 187
Query: 221 TFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIE 280
+ ++ D+A+++ + + K + +Y ++ +CK +S Y L
Sbjct: 188 SLCTADRVDDAVELIKELSSKHCSP-DIYSYNFLVKNLCKSRTLSLVYPNL--------- 237
Query: 281 ADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQV 336
+T + +I + LREA ++V+ +E KPD LY+ ++KG L R EA +V
Sbjct: 238 ---VTYTILIDNVCNTKNLREATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEAIEV 294
Query: 337 FREMIKRGCEPTMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLV 383
+ M ++G EP + TY L+ G L K GR KG P T + G+
Sbjct: 295 YNRMKEKGVEPDLITYNTLIFG-LSKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLMNGMC 353
Query: 384 KAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
+ G++L A +E + +G YN LH
Sbjct: 354 RKGETLAALALLEEMEMKGCSPNTCTYNTLLH 385
>gi|255661028|gb|ACU25683.1| pentatricopeptide repeat-containing protein [Citharexylum
montevidense]
Length = 376
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 159/327 (48%), Gaps = 8/327 (2%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEV 121
Y + A+ + +++ +N M++ K+ I ++ + MGR N +F + L
Sbjct: 13 YKEMAESKISPDAVVYNAMLNGFFKAGRIKNCFDLWELMGREGSRNVASFNTMMRGLFNN 72
Query: 122 RELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAY 180
E+ ++ + + +M + G +V C+ ++ +++ + E + AY
Sbjct: 73 GEVDEVFSIWELMKESGFVEDSTTYGILVHGFCKNGYNNKSLHVLEIAKQEGGALDAFAY 132
Query: 181 GWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
+I G C +G L +A + N M + G +P+ V + +I +K ++A++VF+ +
Sbjct: 133 SAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGASKFEDAIRVFKELGT 192
Query: 241 KRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
+ + TY +I+ +CK + ++AY +++EM ++G +T S +I GL ++
Sbjct: 193 RHCSPT-IVTYNTLINGLCKGERFAEAYDLVKEMLEKGWNPSVITYSLLIKGLCQDHKVE 251
Query: 301 EAYK----VVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
A + V+ + KPD+ +++ LI GL + + A++++ +M C P + TY L+
Sbjct: 252 MALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTEHASELYFDMNHWNCAPNLVTYNTLM 311
Query: 357 QGHLGKRGRKGPDPLVNFDTIFVGGLV 383
+G +G + LV + I GL+
Sbjct: 312 EGFY--KGGDTRNALVIWARILRNGLL 336
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 133/280 (47%), Gaps = 21/280 (7%)
Query: 154 CQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSI 212
C+ + A+ + +++E I P+ + Y ++ G+ G + +W LM EG ++
Sbjct: 1 CESGAINAAERVYKEMAESKISPDAVVYNAMLNGFFKAGRIKNCFDLWELMGREG-SRNV 59
Query: 213 DVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLE 272
+ M+ F + DE ++++M+ + +TY I++ CK G +++ +LE
Sbjct: 60 ASFNTMMRGLFNNGEVDEVFSIWELMKESGFVE-DSTTYGILVHGFCKNGYNNKSLHVLE 118
Query: 273 EMFKRGIEADNLTLSSIIYGLLARGRLREAYKV----VEEIEKPDISLYHGLIKGLLRLR 328
+ G D S++I GL G+L +A V +E KP+ +Y+ LI GLL
Sbjct: 119 IAKQEGGALDAFAYSAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGAS 178
Query: 329 RAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR-------------KGPDPLVNFD 375
+ +A +VF+E+ R C PT+ TY L+ G L K R KG +P V
Sbjct: 179 KFEDAIRVFKELGTRHCSPTIVTYNTLING-LCKGERFAEAYDLVKEMLEKGWNPSVITY 237
Query: 376 TIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
++ + GL + K A + +V+++G + +N +H
Sbjct: 238 SLLIKGLCQDHKVEMALQLWNQVISKGFKPDVQMHNILIH 277
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 106/247 (42%), Gaps = 6/247 (2%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
+ + L ++ +L K V+ + M + GC+ + ++ N ++ L +A + +L
Sbjct: 131 AYSAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGASKFEDAIRVFKEL 190
Query: 170 -SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
+ P + Y LI G C EA + M ++G+ PS+ +I+ + +K
Sbjct: 191 GTRHCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWNPSVITYSLLIKGLCQDHKV 250
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
+ A++++ + K + + I+I +C GK A + +M + +T ++
Sbjct: 251 EMALQLWNQVISKGFKP-DVQMHNILIHGLCSVGKTEHASELYFDMNHWNCAPNLVTYNT 309
Query: 289 IIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
++ G G R A + I + PDI Y+ +KGL R A + + +
Sbjct: 310 LMEGFYKGGDTRNALVIWARILRNGLLPDIISYNITLKGLCACNRISVAILFLNDAVTKN 369
Query: 345 CEPTMHT 351
PT+ T
Sbjct: 370 IVPTVIT 376
>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 675
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 136/285 (47%), Gaps = 29/285 (10%)
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCD 189
+++M +CG ++ N ++ + C++ V EA L+L++ + PN++ Y L+ G
Sbjct: 178 YNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSH 237
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
G+L +A ++ M G E S D +I + + + DEA ++ + M + R L
Sbjct: 238 SGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEM-LSRGAVPTLV 296
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
TY ++ +CK G++S A +L+ M + + D ++ +++IYG G + EA+ + E+
Sbjct: 297 TYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAEL 356
Query: 310 E----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
P + Y+ LI GL R+ A ++ EMIK G
Sbjct: 357 RFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHG--------------------- 395
Query: 366 KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY 410
PDP V TI V G K G A + + ++NRG++ RF Y
Sbjct: 396 --PDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAY 438
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 146/294 (49%), Gaps = 7/294 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
N +T+N +V+ + S ++ E +QEM R L V+ T+ + E +L +
Sbjct: 224 NDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLG 283
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDV 190
M G +L N ++ LC+ V +A+ L+ + +++ + P+ ++Y LI GY +
Sbjct: 284 EEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRL 343
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G++ EA ++ + G PS+ + +I+ ++ D AM++ M +K D + T
Sbjct: 344 GNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEM-IKHGPDPDVFT 402
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
+ I++ CK G + A + +EM RG++ D + I G L G +A+ + EE+
Sbjct: 403 FTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEML 462
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL 360
PD+ Y+ I GL +L +EA+++ ++M+ G P TY ++ HL
Sbjct: 463 ARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHL 516
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 95/197 (48%), Gaps = 13/197 (6%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
L+ ++P+ AY I G +GD +A + M GF P + + I+ K+
Sbjct: 427 LNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNL 486
Query: 229 DEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNL 284
EA ++ VK+M GL TY +I G + +A + EM +GI +
Sbjct: 487 KEASEL-----VKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVV 541
Query: 285 TLSSIIYGLLARGRLREA----YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREM 340
T + +I+ RGRL+ A +++ E+ P++ Y+ LI GL ++R+ +A + F EM
Sbjct: 542 TYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEM 601
Query: 341 IKRGCEPTMHTYIMLLQ 357
+G P +TY +L+
Sbjct: 602 QAKGISPNKYTYTILIN 618
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 92/188 (48%), Gaps = 31/188 (16%)
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
TY ++D CK+GK+ +A +L +M K G +++T + ++ GL G L +A ++++E+
Sbjct: 192 TYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEM 251
Query: 310 EKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
+ + + Y LI+G + EA+++ EM+ RG PT
Sbjct: 252 LRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPT----------------- 294
Query: 366 KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN----EE 421
LV ++TI GL K G+ DA K ++ ++N+ + YN ++ Y+ E
Sbjct: 295 -----LVTYNTIMY-GLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGE 348
Query: 422 GVVMFEEV 429
++F E+
Sbjct: 349 AFLLFAEL 356
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 6/169 (3%)
Query: 161 EAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMI 219
EA L+ K L + P+ + Y +I + G L +A ++ M +G PS+ +I
Sbjct: 488 EASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLI 547
Query: 220 ETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGI 279
++ + A+ F M K + + TY +I+ +CK K+ QAY EM +GI
Sbjct: 548 HSYAVRGRLKLAILHFFEMHEKGVHP-NVITYNALINGLCKVRKMDQAYKFFTEMQAKGI 606
Query: 280 EADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGL 324
+ T + +I G +EA ++ +++ +PD + L+K L
Sbjct: 607 SPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHL 655
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 38/211 (18%), Positives = 79/211 (37%), Gaps = 66/211 (31%)
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS-------------------II 290
TY +++D + + G + AY ++E++ +E + + +
Sbjct: 83 TYAVILDILARNGLMRSAYCVMEKVVSVKMENGVVDVLILDLLLWIYAKKSMLEKCLLVF 142
Query: 291 YGLLARGRL-----------------------REAYKVVEEIE-KPDISLYHGLIKGLLR 326
Y ++++G L RE Y V+ E +P + Y+ ++ +
Sbjct: 143 YKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCK 202
Query: 327 LRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAG 386
+ +EA Q+ +M K GC P TY + V GL +G
Sbjct: 203 QGKVQEALQLLLQMQKMGCLPNDVTY-----------------------NVLVNGLSHSG 239
Query: 387 KSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
+ A + ++ ++ G+EV + Y+ + Y
Sbjct: 240 ELEQAKELIQEMLRLGLEVSAYTYDPLIRGY 270
>gi|125590524|gb|EAZ30874.1| hypothetical protein OsJ_14948 [Oryza sativa Japonica Group]
Length = 414
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 160/333 (48%), Gaps = 26/333 (7%)
Query: 70 FAHNSITFNRMVDIIGKSRNID---LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKK 126
+A+N + M +IG+ R D LF +Q+ R + +F + + + V +++K
Sbjct: 47 YAYNKL----MSSLIGRGRVHDVVALFERWIQD--RVYSPDVWSFNVVIKGVCRVGQVQK 100
Query: 127 MVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE--WIKPNEIAYGWLI 184
+ MN+ GC N +V LC+ V ++ +L PN + + +I
Sbjct: 101 ALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVI 160
Query: 185 KGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ-MMRVKRM 243
GYC G L +A ++N M G P+ + +I + K+ A++V+Q M R++
Sbjct: 161 SGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCP 220
Query: 244 DDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
D+ T+ +ID C+ G++ A + +M + I+ + T S II+ L + R EA
Sbjct: 221 PDV--VTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAI 278
Query: 304 KVVEEIE-KPDIS----LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
++ E+ +PDI+ +Y+ +I L + + EA + + M ++GC P +TY +L+ G
Sbjct: 279 GLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIG 338
Query: 359 HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDA 391
+ K ++ +F +V+AG S D+
Sbjct: 339 YCMKS-------RISEAIMFFHEMVEAGCSPDS 364
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 122/273 (44%), Gaps = 7/273 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV--NDKTFKIALMTLAEVRELKKMVNF 130
+++T N +VD + ++ + E L+ + R + N TF + + +L+ +
Sbjct: 116 DTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAV 175
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCD 189
++ M G + N ++ + + A + +++ P+ + + LI GYC
Sbjct: 176 YNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCR 235
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
G L +A +IW+ M +P++ +I + K N+ DEA+ + + ++
Sbjct: 236 CGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAF 295
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA----YKV 305
Y VID +CK GK+ +A + + M ++G D T + +I G + R+ EA +++
Sbjct: 296 IYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEM 355
Query: 306 VEEIEKPDISLYHGLIKGLLRLRRAREATQVFR 338
VE PD + I LL+ E V R
Sbjct: 356 VEAGCSPDSITVNCFISCLLKAGMPNEVDHVMR 388
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/248 (18%), Positives = 112/248 (45%), Gaps = 22/248 (8%)
Query: 188 CDVGDLIEASK-IWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
C +L++AS + + ++ G +K++ + + + + +F+ R+
Sbjct: 21 CTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSP 80
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
+ ++ +VI +C+ G++ +A ++E M + G D +T + ++ GL + ++V+
Sbjct: 81 DVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVL 140
Query: 307 EEIEK-----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG 361
+++ P++ + +I G + + +A V+ +M+ G P TY +L+ G+ G
Sbjct: 141 RRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGY-G 199
Query: 362 KRGRKG--------------PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPR 407
K G G P +V F ++ + G + G+ DA + + ++
Sbjct: 200 KVGDLGSAVEVYQQMTRLRCPPDVVTFSSL-IDGYCRCGQLDDALRIWSDMAQHRIQPNV 258
Query: 408 FDYNKFLH 415
+ ++ +H
Sbjct: 259 YTFSIIIH 266
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 78/174 (44%), Gaps = 22/174 (12%)
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE-----IEKPDISLYH 318
+ + T+L + + G + + ++ L+ RGR+ + + E + PD+ ++
Sbjct: 27 LDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFN 86
Query: 319 GLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG---------------HLGKR 363
+IKG+ R+ + ++A ++ M + GC P T+ +L+ G L +
Sbjct: 87 VVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRD 146
Query: 364 GRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
G P+ +V F ++ + G KAGK DA ++ G+ YN ++ Y
Sbjct: 147 GVCMPN-VVTFTSV-ISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGY 198
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 150/334 (44%), Gaps = 55/334 (16%)
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYC 188
FF+ M G S+ N ++ LC+ + ++ L +++ E + P+ + Y LI GY
Sbjct: 276 FFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYG 335
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR--------- 239
VG L E + ++N M D G P I + +I + K K A + F M+
Sbjct: 336 KVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVV 395
Query: 240 ------------------VKRMDDL---GL----STYRIVIDWMCKRGKISQAYTMLEEM 274
+K D+ GL TY +ID CK G +++A+ +L +M
Sbjct: 396 TYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDM 455
Query: 275 FKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRA 330
+ G++ + +T ++++ GL GR+ EA +V + K P+ +Y L+ G ++ R
Sbjct: 456 LQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERM 515
Query: 331 REATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK--------------GPDPLVNFDT 376
+A ++ ++M + +P + Y ++ GH +R + +P+++ T
Sbjct: 516 EDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVIS--T 573
Query: 377 IFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY 410
+ KAGKS DA + + + + GVE Y
Sbjct: 574 TIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTY 607
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 144/333 (43%), Gaps = 41/333 (12%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
N T+ ++D K+ N+ W+ L +M + + +N T+ L L + + + F
Sbjct: 428 NEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVF 487
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDV 190
M G + ++ +V + + + +A ++ +++E IKP+ I YG +I G+C
Sbjct: 488 RSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQ 547
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR----------- 239
L E I M G + + +I+ +FK K +A+ FQ M+
Sbjct: 548 RKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTY 607
Query: 240 -------------------VKRMDDLGL----STYRIVIDWMCKRGKISQAYTMLEEMFK 276
RM LGL + Y +ID +CK I A + +EM
Sbjct: 608 CVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQC 667
Query: 277 RGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP----DISLYHGLIKGLLRLRRARE 332
RG+ D +++I G L G L+EA ++ + + D+ +Y L+ G + +
Sbjct: 668 RGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQ 727
Query: 333 ATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
A + F EMI++G P I LL+ + KRG+
Sbjct: 728 ARKFFNEMIEKGILPEEVLCICLLREYY-KRGQ 759
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 148/366 (40%), Gaps = 49/366 (13%)
Query: 71 AHNSI---TFNRMVDIIGKSRNI-DLFWETLQEMGRRRLVNDKTFKI--ALMTLAEVRE- 123
AH+++ N +D+ NI D+ W T V D F + L L E E
Sbjct: 182 AHDTVKEVIMNSRMDMGFPVCNIFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANEC 241
Query: 124 LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWL 183
+M NF + C + L L+K RK + + I P+ Y +
Sbjct: 242 FSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM------IGAGIAPSVFTYNVM 295
Query: 184 IKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM 243
I C GDL + +++ M + G P + + +I+ + K+ +E +F M+
Sbjct: 296 IDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMK---- 351
Query: 244 DDLG----LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
D+G + TY +I+ CK K+ +A+ EM G++ + +T S++I G +
Sbjct: 352 -DVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMM 410
Query: 300 REAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
+ A K+ ++ + P+ Y LI + EA ++ +M++ G + + TY L
Sbjct: 411 QGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTAL 470
Query: 356 LQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
L G L KAG+ ++A + ++ G+ + Y +H
Sbjct: 471 LDG-----------------------LCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVH 507
Query: 416 YYSNEE 421
Y E
Sbjct: 508 GYIKAE 513
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 18/207 (8%)
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
TY ++ID++CK G + + + +M + G+ D +T +S+I G G L E + E+
Sbjct: 291 TYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEM 350
Query: 310 EK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG- 364
+ PDI Y+GLI + + A + F EM G +P + TY L+ K G
Sbjct: 351 KDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDA-FCKEGM 409
Query: 365 ------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNK 412
R G P T + KAG +A K + ++ GV++ Y
Sbjct: 410 MQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTA 469
Query: 413 FLHYYSNEEGVVMFEEVGKKLREVGLA 439
L ++ EEV + + + G++
Sbjct: 470 LLDGLCKAGRMIEAEEVFRSMLKDGIS 496
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 10/189 (5%)
Query: 128 VNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLV-VEAKYLILKLSEWIKPNEIAYGWLIKG 186
+NFF M D G E ++ ++ LC+ +V + Y LS ++PN Y LI G
Sbjct: 589 LNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDG 648
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
C + A K+++ M G P I +I+ K EA+ + + RM +L
Sbjct: 649 LCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVL-----ISRMTEL 703
Query: 247 G----LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
L Y ++ + G++ QA EM ++GI + + ++ RG+L EA
Sbjct: 704 AIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEA 763
Query: 303 YKVVEEIEK 311
++ E+E+
Sbjct: 764 IELKNEMER 772
>gi|255660840|gb|ACU25589.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 418
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 154/333 (46%), Gaps = 29/333 (8%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T + L L +++ K + +F+ + +C SL N ++ C+ + A+ + +
Sbjct: 103 TCRKVLEHLMKLKYFKLVWSFYKEILECRYPASLYFFNILMDRFCKEGEIRLAQSVFDGI 162
Query: 170 SEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++W ++P+ +++ L+ GY +GDL E ++ + M G +P + +I K +K
Sbjct: 163 TKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKM 222
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
DEA K+F M + + G+ T+ +ID CK GK+ A + ++M +G D +T ++
Sbjct: 223 DEAHKLFDEMLDRGLVPNGV-TFTTLIDGHCKNGKLDLAMEIYKQMLSQGFSPDXITYNT 281
Query: 289 IIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+IYGL +G L +A + +E+ KPD Y LI G + A + + MIK
Sbjct: 282 LIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKEN 341
Query: 345 CEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVE 404
+Y T + GL K G+S+DA K + +++ G++
Sbjct: 342 IRLDDVSY-----------------------TALISGLCKEGRSVDAEKMLREMLSVGLK 378
Query: 405 VPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVG 437
Y +H + V M ++ K+++ G
Sbjct: 379 PDTGTYTIVMHEFCKNGDVKMGSKLLKEMQRDG 411
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 96/241 (39%), Gaps = 73/241 (30%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
N +TF ++D K+ +DL E ++M + D
Sbjct: 240 NGVTFTTLIDGHCKNGKLDLAMEIYKQMLSQGFSPDXI---------------------- 277
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVG 191
N ++ LC++ + +AK L ++S + +KP++I Y LI G C G
Sbjct: 278 ------------TYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTTLIDGSCKEG 325
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK-RMDDLGLST 250
DL ET F+ K +M++ R+DD+ +
Sbjct: 326 DL--------------------------ETAFEYRK--------RMIKENIRLDDV---S 348
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y +I +CK G+ A ML EM G++ D T + +++ G ++ K+++E++
Sbjct: 349 YTALISGLCKEGRSVDAEKMLREMLSVGLKPDTGTYTIVMHEFCKNGDVKMGSKLLKEMQ 408
Query: 311 K 311
+
Sbjct: 409 R 409
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 179/371 (48%), Gaps = 26/371 (7%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDL---FWETLQEMGRRRLVNDKTFKIALMTL 118
Y + A+ + + + +N M++ ++ I+ W+ +++ G R +V ++ I + L
Sbjct: 313 YKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVV---SYNILIRGL 369
Query: 119 AEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPN-- 176
E ++ + ++ + ++ + C +V LC+ + +A IL+ +E + +
Sbjct: 370 FENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKA-LSILEEAENGRGDLD 428
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
AY +I G C G L E + + + MT G +P+ V + +I F + +K ++A++ F
Sbjct: 429 TFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFG 488
Query: 237 MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR 296
M V + + TY +I+ + K + S+AY +++EM +G + + +T S ++ GL
Sbjct: 489 NM-VSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQG 547
Query: 297 GRLREAY----KVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
+L A + +E+ KPD+ +++ +I GL + +A Q++ EM +R C P + T+
Sbjct: 548 KKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTH 607
Query: 353 IMLLQGHLGKRG------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMN 400
L++G R + GP P + I + GL + DA ++ ++
Sbjct: 608 NTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVD 667
Query: 401 RGVEVPRFDYN 411
RGV +N
Sbjct: 668 RGVLPTAITWN 678
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 129/255 (50%), Gaps = 6/255 (2%)
Query: 109 KTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK 168
+++ L L E + + +FF G +L+ N ++K C++K +AK L+
Sbjct: 115 RSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNW 174
Query: 169 LSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINK 227
+ E P+ +YG LI G + +A K+++ M + G P + + +I+ FFK
Sbjct: 175 MWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGD 234
Query: 228 DDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLS 287
A ++++ + + +Y ++I+ +CK GK +++ + M K D T S
Sbjct: 235 ILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYS 294
Query: 288 SIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
++I+GL G L A +V +E+ + PD+ +Y+ ++ G LR R E ++++ M K
Sbjct: 295 TLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKE 354
Query: 344 GCEPTMHTYIMLLQG 358
GC T+ +Y +L++G
Sbjct: 355 GCR-TVVSYNILIRG 368
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 150/326 (46%), Gaps = 23/326 (7%)
Query: 85 GKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLE 144
G N WE L + G N ++ + + L + + + +H M L
Sbjct: 233 GDILNASEIWERLLK-GPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLY 291
Query: 145 MLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLM 203
+ ++ LC + A + +++E + P+ + Y ++ GY G + E ++W +M
Sbjct: 292 TYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVM 351
Query: 204 TDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGK 263
EG + + +I F+ K DEA+ +++++ K + TY +++ +CK G
Sbjct: 352 EKEGCRTVVSY-NILIRGLFENAKVDEAISIWELLPEKDCCADSM-TYGVLVHGLCKNGY 409
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHG 319
+++A ++LEE + D SS+I GL GRL E V++++ KP+ + +
Sbjct: 410 LNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNA 469
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR-------------K 366
+I G +R + +A + F M+ +GC PT+ TY L+ G L K R K
Sbjct: 470 VINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLING-LSKAERFSEAYALVKEMLHK 528
Query: 367 GPDPLVNFDTIFVGGLVKAGKSLDAA 392
G P + ++ + GL + GK LD A
Sbjct: 529 GWKPNMITYSLLMNGLCQ-GKKLDMA 553
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 133/302 (44%), Gaps = 26/302 (8%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLI--LKLSEWIKPNEIAYGWLIKGYCDVGDLIE 195
G ++ + + ++K L KLV ++ ++ + P ++A +IK Y +
Sbjct: 38 GYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQKCKCPEDVALT-VIKAYAKNSMPDQ 96
Query: 196 ASKIWNLMTDE-GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIV 254
A I+ M + G +P I + ++ + NK DEA F + L TY I+
Sbjct: 97 ALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSP-NLQTYNIL 155
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK--- 311
I C++ + +A +L M+++G D + ++I L G + +A K+ +E+ +
Sbjct: 156 IKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGV 215
Query: 312 -PDISLYHGLIKGLLRLRRAREATQVFREMIK-RGCEPTMHTYIMLLQG----------- 358
PD++ Y+ LI G + A++++ ++K P + +Y +++ G
Sbjct: 216 TPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESF 275
Query: 359 ---HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
H K+ +G D L + T+ + GL +G A + + + GV YN L+
Sbjct: 276 EIWHRMKKNERGQD-LYTYSTL-IHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLN 333
Query: 416 YY 417
Y
Sbjct: 334 GY 335
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/263 (19%), Positives = 103/263 (39%), Gaps = 36/263 (13%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
++ ++ M++ + + +D L +M + N + +L+ + FF
Sbjct: 428 DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFF 487
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDV 190
M GC ++ N ++ L + + EA L+ + L + KPN I Y L+ G C
Sbjct: 488 GNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQG 547
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM------------ 238
L A +W ++GF+P + + + +I K ++A++++ M
Sbjct: 548 KKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTH 607
Query: 239 --------------RVKRMDDLGLS--------TYRIVIDWMCKRGKISQAYTMLEEMFK 276
R ++ D L +Y I + +C +IS A L +
Sbjct: 608 NTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVD 667
Query: 277 RGIEADNLTLSSIIYGLLARGRL 299
RG+ +T + ++ +L G L
Sbjct: 668 RGVLPTAITWNILVRAVLDNGAL 690
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 134/277 (48%), Gaps = 30/277 (10%)
Query: 156 RKLVVEAKY-LILKLSEWIK-----PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFE 209
+L VE ++ L + EW+ PN Y +IKG+C +G + +A+ I++ M G
Sbjct: 385 NQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPS 444
Query: 210 PSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYT 269
P++ + +I +FK + AM++ +MM+ + L TY +I + GK+ A++
Sbjct: 445 PNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGL-KLDTWTYANLISGFSRGGKLEHAFS 503
Query: 270 MLEEMFKRGIEADNLTLSSIIYGLLARGRLREA----YKVVEEIEKPDISLYHGLIKGLL 325
+ EM + GI + +T ++II G L ++ +A +K+VE P Y+ +I G
Sbjct: 504 LFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFS 563
Query: 326 RLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR-----------KGPDPLVNF 374
+ R EA +M+K+G P + TY + G L K GR K D N
Sbjct: 564 KTNRISEAENFCGKMVKQGLLPNVITYTSFIDG-LCKNGRTSLAFKIFHEMKKRDYFPNL 622
Query: 375 DTI--FVGGLVKAGKSLDAAKYVERVMNRGVEVPRFD 409
T + GL + G++ DA ER+++ G E P D
Sbjct: 623 CTYSSLIDGLCQEGQAEDA----ERLLDDGCE-PNVD 654
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 94/187 (50%), Gaps = 1/187 (0%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
I PN + Y +I GY V + +A ++ M + G PS + MI F K N+ EA
Sbjct: 513 ISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAE 572
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
M VK+ + TY ID +CK G+ S A+ + EM KR + T SS+I G
Sbjct: 573 NFCGKM-VKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDG 631
Query: 293 LLARGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
L G+ +A +++++ +P++ Y L++GL R EA Q+ M K+G +P+ Y
Sbjct: 632 LCQEGQAEDAERLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIY 691
Query: 353 IMLLQGH 359
LL G
Sbjct: 692 RALLVGQ 698
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 113/261 (43%), Gaps = 21/261 (8%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
PN + Y LI G C G L EA + M D+G EP++ I + + EA+K+
Sbjct: 270 PNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKL 329
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
M+ KR + TY +I + + GK A + +M G+ +T S++I L
Sbjct: 330 LGKMK-KRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLY 388
Query: 295 ARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
GR A + E + P+ Y+ +IKG + ++AT +F +M+K G P +
Sbjct: 389 VEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVI 448
Query: 351 TYIMLL-----QGHLGKRGR-----KGPDPLVNFDTI----FVGGLVKAGKSLDAAKYVE 396
TY +++ QG++ R KG + DT + G + GK A
Sbjct: 449 TYNIIIHIYFKQGYMNNAMRLLEMMKGNG--LKLDTWTYANLISGFSRGGKLEHAFSLFN 506
Query: 397 RVMNRGVEVPRFDYNKFLHYY 417
++ G+ YN ++ Y
Sbjct: 507 EMVEHGISPNVVTYNAIINGY 527
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 83/168 (49%), Gaps = 8/168 (4%)
Query: 203 MTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLSTYRIVIDWMCKR 261
M + G P++ + MI+ K EA + + D TY +I CK
Sbjct: 193 MLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDT--FTYTSLIIGHCKN 250
Query: 262 GKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE-IEK---PDISLY 317
G + A+ M + M K G + +++T S++I GL + GRL EA ++EE I+K P + Y
Sbjct: 251 GNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAY 310
Query: 318 HGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
I L R+ EA ++ +M KRGC P + TY L+ G L + G+
Sbjct: 311 TIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISG-LSRDGK 357
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 9/178 (5%)
Query: 139 CEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASK 198
C YS ++ LCQ +A+ L L + +PN Y L++G C G EA +
Sbjct: 623 CTYS-----SLIDGLCQEGQAEDAERL---LDDGCEPNVDTYTTLVRGLCGKGRCYEADQ 674
Query: 199 IWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWM 258
+ M +G +PS ++ ++ K + + A+K+F M LS Y+ +I +
Sbjct: 675 LVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPC-LSDYKALICAL 733
Query: 259 CKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISL 316
CK +A M + M K+ +D + + ++ GLL G + +++ +E + +L
Sbjct: 734 CKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRNCTL 791
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 133/291 (45%), Gaps = 18/291 (6%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEA 196
GC+ L VV LC+R + A L+ K+ + I+P + Y +I C+ ++ +A
Sbjct: 216 GCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDA 275
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVID 256
++ M ++G P++ + +I + +A ++ M ++R + + T+ +ID
Sbjct: 276 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM-IERKINPNVVTFSALID 334
Query: 257 WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE-EIEK---P 312
K GK+ +A + +EM KR I+ D T SS+I G RL EA + E I K P
Sbjct: 335 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 394
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG-------- 364
++ Y+ LIKG + +R E ++FREM +RG TY L+ G R
Sbjct: 395 NVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVF 454
Query: 365 ----RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
G P + +I + GL GK A E + +E + YN
Sbjct: 455 KQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYN 505
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 171/386 (44%), Gaps = 52/386 (13%)
Query: 66 AQPCFAHNS---------------ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKT 110
A P F+H S I+ NR+ D+ ++LF + ++ +V
Sbjct: 28 APPSFSHCSFWVRDFSGVRYDYRKISINRLNDL-KLDDAVNLFGDMVKSRPFPSIVE--- 83
Query: 111 FKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS 170
F L +A++ + +++ M + G ++L + ++ C+R + A ++ K+
Sbjct: 84 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMM 143
Query: 171 EW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD 229
+ +P+ + L+ G+C + +A + M + G++P + +I F+ N+
Sbjct: 144 KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRAS 203
Query: 230 EAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSI 289
EA+ + M VK L TY IV++ +CKRG I A ++L++M + IE + ++I
Sbjct: 204 EAVALVDRMVVKGCQP-DLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTI 262
Query: 290 IYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGC 345
I L + +A + E++ +P++ Y+ LI+ L R +A+++ +MI+R
Sbjct: 263 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 322
Query: 346 EPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEV 405
P + T+ + + VK GK ++A K + ++ R ++
Sbjct: 323 NPNVVTF-----------------------SALIDAFVKEGKLVEAEKLYDEMIKRSIDP 359
Query: 406 PRFDY----NKFLHYYSNEEGVVMFE 427
F Y N F + +E MFE
Sbjct: 360 DIFTYSSLINGFCMHDRLDEAKHMFE 385
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 107/220 (48%), Gaps = 8/220 (3%)
Query: 147 NKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
+ ++ C + EAK++ L +S+ PN + Y LIKG+C + E +++ M+
Sbjct: 365 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQ 424
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
G + +I FF+ + D A VF QM+ + D+ TY I++D +C GK+
Sbjct: 425 RGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDI--MTYSILLDGLCNNGKV 482
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGL 320
A + E + + +E D T + +I G+ G++ + + + + KP++ Y +
Sbjct: 483 ETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTM 542
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL 360
+ G R EA +FREM + G P TY L++ HL
Sbjct: 543 MSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHL 582
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 147/338 (43%), Gaps = 42/338 (12%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKT-FKIALMTLAEVRELKKMVNFFHI 133
+T+ +V+ + K +IDL L++M + ++ + + L + + +N F
Sbjct: 222 VTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTE 281
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGD 192
M++ G ++ N +++ LC +A L+ + E I PN + + LI + G
Sbjct: 282 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 341
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
L+EA K+++ M +P I +I F ++ DEA +F++M K + TY
Sbjct: 342 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP-NVVTYN 400
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG-------------------- 292
+I CK ++ + + EM +RG+ + +T +++I+G
Sbjct: 401 TLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSD 460
Query: 293 ---------------LLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREA 333
L G++ A V E +++ PDI Y+ +I+G+ + + +
Sbjct: 461 GVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDG 520
Query: 334 TQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPL 371
+F + +G +P + TY ++ G K ++ D L
Sbjct: 521 WDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADAL 558
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 131/287 (45%), Gaps = 37/287 (12%)
Query: 210 PSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKIS 265
PSI K++ K+NK D + + + +M +LG+S TY I+I+ C+R ++S
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGE-----QMQNLGISHNLYTYSILINCFCRRSQLS 133
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLI 321
A +L +M K G E D +TL+S++ G R+ +A +V ++ +PD ++ LI
Sbjct: 134 LALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLI 193
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG-------------RKGP 368
GL R RA EA + M+ +GC+P + TY +++ G L KRG +
Sbjct: 194 HGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNG-LCKRGDIDLALSLLKKMEQGKI 252
Query: 369 DPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN-----EEGV 423
+P V + L DA + N+G+ YN + N +
Sbjct: 253 EPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 312
Query: 424 VMFEEVGKKLRE--VGLADLADIFQRYGKKMATR---ERRRNRAIEP 465
++ + + +K+ V + L D F + GK + + R+I+P
Sbjct: 313 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 359
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 129/279 (46%), Gaps = 9/279 (3%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N +TF+ ++D K + + EM +R + D T+ + L + + F
Sbjct: 325 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 384
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
+M C ++ N ++K C+ K V E L ++S+ + N + Y LI G+
Sbjct: 385 ELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQA 444
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
+ A ++ M +G P I +++ K + A+ VF+ ++ +M+ + T
Sbjct: 445 RECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEP-DIYT 503
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y I+I+ MCK GK+ + + + +G++ + +T ++++ G +G EA + E++
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMK 563
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGC 345
+ PD Y+ LI+ LR + ++ REM R C
Sbjct: 564 EEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM--RSC 600
>gi|148906806|gb|ABR16549.1| unknown [Picea sitchensis]
Length = 524
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 163/356 (45%), Gaps = 23/356 (6%)
Query: 72 HNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFF 131
H+ + +N +VD++GK + D W+ ++ M + +V+ +T + ++ + F
Sbjct: 136 HSPLAWNLLVDLLGKEKLFDAMWDCIKVMKNQGIVSMETMSSVFGNYVQAGKVAEARMTF 195
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVG 191
++ GC + LN + C+ K EA K+ E I P+ Y L++G G
Sbjct: 196 DVIEQYGCPQDVVALNCFLSAFCRYKQSKEALEFFDKVKEKIAPDADTYALLLEGLEIEG 255
Query: 192 DLIEASKIWN-LMTDEGFEP-SIDVVDKMIETFFKINKDDEAMKVFQMMRVKR-MDDLGL 248
++ +A + ++ G+ P + + + T ++ +EA+K +M+ ++ + DLG
Sbjct: 256 NVSKARTTFGEMIIRHGWLPNNTSAYNAFLSTLVNGSQVEEALKFLAVMKTRKCLPDLGF 315
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE--AYKVV 306
+R + + +R AY + E M + GI D + +++I + ++ AY+++
Sbjct: 316 --FRNTLQILYQRKDTKNAYGLWELMKQSGILLDLPSYNTMIGVFCSANPIQVDFAYRLL 373
Query: 307 EEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
+E+ PD Y+ + + L+ R+ EA+ +FREM K P Y+M ++ +
Sbjct: 374 DEMVFTGIFPDFKTYNTIFEALITARKVEEASSIFREMTKNDFCPLYANYVMAIKMYFEA 433
Query: 363 RG------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
+K P + I + G G++ +A KY + RGV++P
Sbjct: 434 DDPEMAVMMWKHMIQKAIFPKSDCAAILIDGFCDLGRASEALKYSLEAITRGVQIP 489
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 99/241 (41%), Gaps = 6/241 (2%)
Query: 72 HNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNF 130
+N+ +N + + ++ + L M R+ + D F+ L L + ++ K
Sbjct: 276 NNTSAYNAFLSTLVNGSQVEEALKFLAVMKTRKCLPDLGFFRNTLQILYQRKDTKNAYGL 335
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLV-VEAKYLILK--LSEWIKPNEIAYGWLIKGY 187
+ +M G L N ++ C + V+ Y +L + I P+ Y + +
Sbjct: 336 WELMKQSGILLDLPSYNTMIGVFCSANPIQVDFAYRLLDEMVFTGIFPDFKTYNTIFEAL 395
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
+ EAS I+ MT F P I+ +F+ + + A+ +++ M K +
Sbjct: 396 ITARKVEEASSIFREMTKNDFCPLYANYVMAIKMYFEADDPEMAVMMWKHMIQKAIFPKS 455
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
I+ID C G+ S+A E RG++ T++ + G+ ++AY +E
Sbjct: 456 -DCAAILIDGFCDLGRASEALKYSLEAITRGVQIPVETMTKLKNASRQAGK-QDAYGQLE 513
Query: 308 E 308
+
Sbjct: 514 K 514
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 125/257 (48%), Gaps = 16/257 (6%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
LS I P +G ++K +C V ++ A + MT G P+ + +I + N+
Sbjct: 192 LSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRV 251
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
+EAMK+ + M + + + T+ VI +CK G+I +A + + M R AD L
Sbjct: 252 NEAMKLLEEMFLMGCEP-DVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGY 310
Query: 289 IIYGLLARGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQ-VFREMIKRGCEP 347
+++GL G++ EA ++ +I P+ LY+ LI G + R EA +++ M+ G EP
Sbjct: 311 LMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEP 370
Query: 348 TMHTYIMLLQGHLGKRG-------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKY 394
T+ +++ G L K+G +KG +P V TI + G K G +A+K
Sbjct: 371 DAFTFNIMIDG-LCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKV 429
Query: 395 VERVMNRGVEVPRFDYN 411
V + +G+ + YN
Sbjct: 430 VNSMSAKGLSLNTVGYN 446
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 125/274 (45%), Gaps = 21/274 (7%)
Query: 161 EAKYLILK--LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKM 218
EAK L+ K + +P+ + +I G C G L+ A + + M +GFEP++ +
Sbjct: 354 EAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTIL 413
Query: 219 IETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRG 278
I+ F K +EA KV M K + L Y +I +CK GKI A M EM +G
Sbjct: 414 IDGFCKQGHFEEASKVVNSMSAKGLS-LNTVGYNCLIGALCKDGKIQDALQMYGEMSSKG 472
Query: 279 IEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREAT 334
+ D T +S+IYGL ++ EA + ++ + Y+ LI LRL ++A
Sbjct: 473 CKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQAD 532
Query: 335 QVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK-----------GPD--PLVNFDTIFVGG 381
++ EM RGC TY L++ L K G G + P +N I +
Sbjct: 533 KLVGEMRFRGCPLDNITYNGLIKA-LCKTGATEKCLGLIEQMFGEEIFPSINSCNILINS 591
Query: 382 LVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
+ GK DA +++ ++ RG+ YN ++
Sbjct: 592 FCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLIN 625
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 138/289 (47%), Gaps = 10/289 (3%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHIM 134
TF ++ +D L++M + V N +++ + L+E + + + M
Sbjct: 202 TFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEM 261
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGDL 193
GCE ++ N V+ LC+ + EA L + L + + G+L+ G C +G +
Sbjct: 262 FLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKV 321
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
EA + + + + P+ + + +I + + +EA + V + T+ I
Sbjct: 322 DEARAMLSKIPN----PNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNI 377
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPD 313
+ID +CK+G + A L+EM K+G E + +T + +I G +G EA KVV +
Sbjct: 378 MIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKG 437
Query: 314 ISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+SL Y+ LI L + + ++A Q++ EM +GC+P ++T+ L+ G
Sbjct: 438 LSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYG 486
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 122/261 (46%), Gaps = 7/261 (2%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
TF I + L + L + F M G E ++ ++ C++ EA ++ +
Sbjct: 374 TFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSM 433
Query: 170 S-EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
S + + N + Y LI C G + +A +++ M+ +G +P I + +I K +K
Sbjct: 434 SAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKM 493
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
+EA+ +++ M ++ + TY +I + I QA ++ EM RG DN+T +
Sbjct: 494 EEALGLYRDMLLEGVI-ANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNG 552
Query: 289 IIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+I L G + ++E++ P I+ + LI R + +A Q R+MI+RG
Sbjct: 553 LIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRG 612
Query: 345 CEPTMHTYIMLLQGHLGKRGR 365
P + TY L+ G L K GR
Sbjct: 613 LTPDIVTYNSLING-LCKMGR 632
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 130/294 (44%), Gaps = 7/294 (2%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMV 128
F N IT+ ++D K + + + + M + L +N + + L + +++ +
Sbjct: 403 FEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDAL 462
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGY 187
+ M+ GC+ + N ++ LC+ + EA L L E + N + Y LI +
Sbjct: 463 QMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAF 522
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
+ + +A K+ M G + +I+ K ++ + + + M + +
Sbjct: 523 LRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFP-S 581
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
+++ I+I+ C+ GK++ A L +M +RG+ D +T +S+I GL GR +EA +
Sbjct: 582 INSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFN 641
Query: 308 EIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
++ PD Y+ LI +A Q+ + + G P T+ +L+
Sbjct: 642 GLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILIN 695
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 77/184 (41%), Gaps = 23/184 (12%)
Query: 240 VKRMDDLGL----STYRIVIDWMCKRGKISQAYTMLEEM-----FKRGIEADNLTLSSII 290
+K+M D G S + +++ + K G QA +L +M F+ ++ N+ L ++
Sbjct: 117 LKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDMWGVYCFEPTFKSYNVVLEILV 176
Query: 291 YGLLARGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
G + Y ++ P + + ++K + A + R+M K GC P
Sbjct: 177 AGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSI 236
Query: 351 TYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVER 397
Y ML+ L + R G +P V + GL KAG+ +AAK +R
Sbjct: 237 IYQMLIHA-LSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDR 295
Query: 398 VMNR 401
++ R
Sbjct: 296 MLLR 299
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 67/165 (40%), Gaps = 2/165 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALMTLAEVRELKKMVNFF 131
++IT+N ++ + K+ + +++M G + + I + + ++ + F
Sbjct: 546 DNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFL 605
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
M G + N ++ LC+ EA L L ++ I P+ + Y LI YC
Sbjct: 606 RDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYE 665
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
G +A ++ GF P+ +I F K N D E +
Sbjct: 666 GLFNDACQLLFKGVSNGFIPNEITWSILINYFVKNNSDSEQFTIL 710
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 152/313 (48%), Gaps = 10/313 (3%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWET---LQEMGRRRLV-NDKTFKIALMTLAEVRELK 125
F N +T+N ++D K + ++ L+EM ++ N TF + + + L
Sbjct: 261 FWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLS 320
Query: 126 KMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLI 184
+ F M G + ++ N +V LC + EAK L+ + LS +KPN I Y LI
Sbjct: 321 AALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALI 380
Query: 185 KGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD 244
GYC L EA ++++ + +G P++ + ++ + K K +EA + Q + +++
Sbjct: 381 NGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAF-LLQKVMLEKGF 439
Query: 245 DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK 304
STY +I C+ GK+ + +L EM RG++AD +T + +I + ++A +
Sbjct: 440 LPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAAR 499
Query: 305 VVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL 360
+++E+ KP Y+ L+ G R A + ++M K G + TY +L+QG+
Sbjct: 500 LIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYC 559
Query: 361 GKRGRKGPDPLVN 373
K + + L+N
Sbjct: 560 RKGKLEDANGLLN 572
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 123/258 (47%), Gaps = 20/258 (7%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
I PN I + +I G C VG L +A + + M GF P++ + +I+ + K+ + +
Sbjct: 226 ISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMY 285
Query: 233 KVFQMMR--VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
K +++ V+ T+ ++ID CK +S A + EEM +G++ +T +S++
Sbjct: 286 KADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLV 345
Query: 291 YGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
GL G+L EA +++E+ KP++ Y+ LI G + + EA ++F + K+G
Sbjct: 346 NGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLT 405
Query: 347 PTMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAK 393
P + T+ LL G+ K G+ KG P + + G + GK +
Sbjct: 406 PNVITFNTLLHGYC-KFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKN 464
Query: 394 YVERVMNRGVEVPRFDYN 411
+ + RGV+ YN
Sbjct: 465 LLNEMQCRGVKADTVTYN 482
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 118/268 (44%), Gaps = 35/268 (13%)
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
N I L+ Y + + + + D ++ S+ + ++ K N+ V+
Sbjct: 159 NSIIADMLVLAYVENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVY 218
Query: 236 QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
+ M ++R L T+ VI+ +CK GK+++A ++++M G + +T +++I G
Sbjct: 219 KEM-IRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCK 277
Query: 296 RGRLREAYK-------VVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
GR+ + YK +VE P+ ++ LI G + A +VF EM +G +PT
Sbjct: 278 MGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPT 337
Query: 349 MHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRF 408
+ TY + LVN GL GK +A ++ +++ ++
Sbjct: 338 VVTY----------------NSLVN-------GLCNEGKLNEAKVLLDEMLSSNLKPNVI 374
Query: 409 DYNKFLHYYSN----EEGVVMFEEVGKK 432
YN ++ Y EE +F+ +GK+
Sbjct: 375 TYNALINGYCKKKLLEEARELFDNIGKQ 402
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 123/279 (44%), Gaps = 21/279 (7%)
Query: 45 ICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRR 104
+CN L+ V L + +P N IT+N +++ K + ++ E +G++
Sbjct: 348 LCNEGKLNEAKVLLDEMLSSNLKP----NVITYNALINGYCKKKLLEEARELFDNIGKQG 403
Query: 105 LV-NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAK 163
L N TF L + ++++ +M + G + N ++ C+ + E K
Sbjct: 404 LTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVK 463
Query: 164 YLILKLS-EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETF 222
L+ ++ +K + + Y LI +C+ + +A+++ + M D+G +PS + ++ +
Sbjct: 464 NLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGY 523
Query: 223 FKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEAD 282
A+ + + M K + TY ++I C++GK+ A +L EM ++G+ +
Sbjct: 524 CMEGNLRAALNLRKQME-KEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPN 582
Query: 283 NLTLSSIIYGLLARGRLREAYKVVEEIEKPDIS--LYHG 319
T I ++ +G L PDI LYH
Sbjct: 583 RTTYEIIKEEMMEKGFL------------PDIEGHLYHA 609
>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
Length = 735
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 136/301 (45%), Gaps = 50/301 (16%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
+S +PN + Y LI GYC+ G++ A K++ M P++ ++I K K
Sbjct: 204 MSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKV 263
Query: 229 DEAMKVFQMM------------------------------RVKRMDDLGLS----TYRIV 254
+ AM +F M + M+ GL T+ ++
Sbjct: 264 ERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVL 323
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA----YKVVEEIE 310
ID +CKR K+ +A L + K+G++ + + +S+I GL G++ A K++ E
Sbjct: 324 IDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGF 383
Query: 311 KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGP-- 368
PD Y LI GL R ++ +AT + +M+++G + + TY +++ + + G +GP
Sbjct: 384 VPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKK 443
Query: 369 ----------DPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYS 418
+P + T+FV + G+ DA + ++++RGV YN + Y+
Sbjct: 444 IFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYA 503
Query: 419 N 419
N
Sbjct: 504 N 504
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 125/322 (38%), Gaps = 53/322 (16%)
Query: 143 LEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNL 202
L LN ++ L + ++ + + L ++ N Y LI YC GD+ A +
Sbjct: 41 LRCLNTLLMALARHRMFPDMESLASRMPAR---NLRTYTTLINAYCLAGDIPAAKQHLTS 97
Query: 203 MTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK--------------------- 241
+ G P + + + A +VF +M ++
Sbjct: 98 LLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGM 157
Query: 242 -----------RMDDLGLST--YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
R D T Y ++ +C+ G+ +A +LEE G E + + ++
Sbjct: 158 VREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNA 217
Query: 289 IIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+I G G + A KV E ++ P++ Y LI GL + + A +F M++ G
Sbjct: 218 LIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAG 277
Query: 345 CEPTMHTYIMLLQ-----GHLGKRGR----KGPDPLVNFD---TIFVGGLVKAGKSLDAA 392
EP + TY L+Q GHL R + LV D ++ + L K K +A
Sbjct: 278 LEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQ 337
Query: 393 KYVERVMNRGVEVPRFDYNKFL 414
++ ++ +GV+V Y +
Sbjct: 338 LFLGSLVKKGVKVNEVVYTSLI 359
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/304 (19%), Positives = 122/304 (40%), Gaps = 21/304 (6%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N + + ++D + K+ ID E +Q+M V D ++ + L ++L +
Sbjct: 351 NEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLML 410
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK--LSEWIKPNEIAYGWLIKGYCD 189
M + G + S ++ L R++ E I ++ I P+ + Y ++ YC+
Sbjct: 411 EDMMEKGIQASPVTYTIIIDELV-REVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCE 469
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
G + +A + M D G P++ + +I + + +A F++M V +
Sbjct: 470 EGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVM-VGKGWKPNED 528
Query: 250 TYRIVIDWMCKRGKISQAY------------TMLEEMFKRGIEADNLTLSSIIYGLLARG 297
+Y +++ + K+ + +LE++ +R + S I L
Sbjct: 529 SYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVD 588
Query: 298 RLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYI 353
RL EA ++ P +Y +I RL+ +A + M K G P + +Y
Sbjct: 589 RLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYR 648
Query: 354 MLLQ 357
+++
Sbjct: 649 IIIS 652
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 54/122 (44%), Gaps = 1/122 (0%)
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
Y I+ C V L EA + M + PS DV +I+ ++ +A+ + M
Sbjct: 577 YSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSM- 635
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
K L +YRI+I +C+ G A + ++ + D + +IYGLL +G +
Sbjct: 636 TKSGYLPHLESYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIYGLLQKGSV 695
Query: 300 RE 301
E
Sbjct: 696 AE 697
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 70/206 (33%), Gaps = 51/206 (24%)
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
RM L TY +I+ C G I A L + G+ D+ +S + G G L
Sbjct: 64 ASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGML 123
Query: 300 REAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
A + VF M RGC T TY LL G
Sbjct: 124 THACR-------------------------------VFVLMPLRGCLRTAFTYTALLHGL 152
Query: 360 LG--------------KRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEV 405
LG + PD V V GL +AG++ +A +E M+ G E
Sbjct: 153 LGAGMVREAMAVFVGMRADSCAPDTHVY--ATMVHGLCEAGRTEEAEVLLEEAMSNGFEP 210
Query: 406 PRFDYNKFLHYYSN----EEGVVMFE 427
YN + Y N E + +FE
Sbjct: 211 NIVVYNALIDGYCNAGEMEHALKVFE 236
>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 950
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 139/287 (48%), Gaps = 14/287 (4%)
Query: 83 IIGK---SRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIMNDCG 138
IIGK +L+W+ LQE+ + ++ + F + + +E +K V F +M D
Sbjct: 99 IIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRDFD 158
Query: 139 CEYSLEMLNKVVKTLCQRK---LVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIE 195
C+ L N ++ L +++ L + +LK + + P+ + YG LI G C +
Sbjct: 159 CKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCN--LNPDVVTYGILIHGLCKTCKTQD 216
Query: 196 ASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVI 255
A +++ MTD G P+ + ++ + K +A ++F MR + L TY +++
Sbjct: 217 ALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNR-DLITYNVLL 275
Query: 256 DWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY----KVVEEIEK 311
+ CK G + A+T+L+ + K G + +I GL R EA+ K++ E K
Sbjct: 276 NGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIK 335
Query: 312 PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
PD+ LY +I+GL + R EA + EM +RG P Y L++G
Sbjct: 336 PDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKG 382
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 127/255 (49%), Gaps = 8/255 (3%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T+ I + L + + + + F M D G + + + V+ LCQ K + +A+ L K+
Sbjct: 200 TYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKM 259
Query: 170 -SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
+ + I Y L+ G+C G L +A + L+T +G + +I F+ +
Sbjct: 260 RASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRY 319
Query: 229 DEAMKVFQ-MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLS 287
+EA +Q M+R D+ L Y I+I + + G++++A T+L EM +RG+ D + +
Sbjct: 320 EEAHMWYQKMLRENIKPDVML--YTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYN 377
Query: 288 SIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
++I G G L EA + EI K P+ Y LI G+ + +A +F+EM K
Sbjct: 378 ALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKL 437
Query: 344 GCEPTMHTYIMLLQG 358
GC P++ T+ L+ G
Sbjct: 438 GCLPSVVTFNSLING 452
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 129/296 (43%), Gaps = 36/296 (12%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
L E IKP+ + Y +I+G G + EA + MT+ G P + +I+ F +
Sbjct: 330 LRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYL 389
Query: 229 DEAMKVFQMMRVKRMDDLGLS-TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLS 287
DEA + + + + D + TY I+I MCK G I++A + +EM K G +T +
Sbjct: 390 DEAESL--RLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFN 447
Query: 288 SIIYGLLARGRLREA---YKVVEEIEKP--------------DISLYHGLIKGLLRLRRA 330
S+I GL RL EA + +E + KP DI+ +++ L
Sbjct: 448 SLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMI 507
Query: 331 REATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKG--------------PDPLVNFDT 376
+A ++ +++ G P + TY +L+ G G PD V + T
Sbjct: 508 LKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDS-VTYGT 566
Query: 377 IFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKK 432
+ + GL +AG++ DA + E+++ +G Y + + E + + V K
Sbjct: 567 L-IDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMK 621
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 94/254 (37%), Gaps = 79/254 (31%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N ++K C + EA+ L L++S+ PN Y LI G C G + +A I+ M
Sbjct: 377 NALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEK 436
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS---------------- 249
G PS+ + +I K N+ +EA +F M + R L L
Sbjct: 437 LGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQV 496
Query: 250 -------------------------------TYRIVIDWMCKRGKISQAYTMLEEMFKRG 278
TY I+I+ CK G I+ A+ + +EM +G
Sbjct: 497 MMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKG 556
Query: 279 IEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFR 338
D++T ++I GL G R +A ++F
Sbjct: 557 HMPDSVTYGTLIDGLYRAG-------------------------------RNEDALEIFE 585
Query: 339 EMIKRGCEPTMHTY 352
+M+K+GC P TY
Sbjct: 586 QMVKKGCVPESSTY 599
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 93/199 (46%), Gaps = 17/199 (8%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
N+ T+ I + + + + K + F M GC S+ N ++ LC+ + EA+ L
Sbjct: 407 NNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLF 466
Query: 167 LKLSEWIKPN---EIAYGW-----------LIKGYCDVGDLIEASKIWNLMTDEGFEPSI 212
++ KP+ ++ G +++ C+ G +++A K+ + D G P I
Sbjct: 467 YQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDI 526
Query: 213 DVVDKMIETFFKINKDDEAMKVFQMMRVK-RMDDLGLSTYRIVIDWMCKRGKISQAYTML 271
+ +I F K + A K+F+ M++K M D TY +ID + + G+ A +
Sbjct: 527 RTYNILINGFCKFGNINGAFKLFKEMQLKGHMPD--SVTYGTLIDGLYRAGRNEDALEIF 584
Query: 272 EEMFKRGIEADNLTLSSII 290
E+M K+G ++ T +I+
Sbjct: 585 EQMVKKGCVPESSTYKTIM 603
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 162/358 (45%), Gaps = 19/358 (5%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIM 134
T+N +V+ + K+R +D L++M + ++ D T+ + + + K+ V M
Sbjct: 253 TYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKM 312
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEI-AYGWLIKGYCDVGDL 193
G + LN ++ +LC+ + +A+ + ++ + +I +Y ++ GY G L
Sbjct: 313 TSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCL 372
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
++ ++++NLM +G P + + +I+ + K D A +F MR + ++ + TY
Sbjct: 373 VDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEP-DVVTYST 431
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI---- 309
VI +C+ GK+ A +M +G+ T +I G G L +A +V ++
Sbjct: 432 VIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKG 491
Query: 310 EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH--LGKRGR-- 365
+PDI ++ +I L +L R +A +F I G P + Y L+ G+ +GK
Sbjct: 492 MRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENAL 551
Query: 366 --------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
G P V V G K G+ + ++++G++ YN LH
Sbjct: 552 RVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILH 609
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 114/226 (50%), Gaps = 12/226 (5%)
Query: 136 DCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGDLI 194
D GC N ++ LC+ V++A+ + +S + PN + Y L+ GYC VG +
Sbjct: 495 DIGC------FNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKME 548
Query: 195 EASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIV 254
A +++++M G +P++ V ++ + K+ + DE + +F+ + K + + Y I+
Sbjct: 549 NALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKP-STTLYNII 607
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE---- 310
+ + + G+ A EM + GI D T S ++ GL EA + +E+
Sbjct: 608 LHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNV 667
Query: 311 KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
K DI+ + +I G+ ++RR EA +F + + G P++ TY +++
Sbjct: 668 KIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMM 713
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 136/287 (47%), Gaps = 10/287 (3%)
Query: 85 GKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSL 143
G + + LF + G R L T+ I + K + FF + G
Sbjct: 84 GPALAVALFNRVSRAHGPRVLSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDT 143
Query: 144 EMLNKVVKTLCQRKLVVEAKYLILKLSEWIK--PNEIAYGWLIKGYCDVGDLIEASKIWN 201
M++ +++ LC+ K EA ++L + P+ +Y ++K C +A ++
Sbjct: 144 IMISNLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLR 203
Query: 202 LMTDEGFE--PSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMC 259
+M + G P+ + +I+ FFK ++A +F M V+R LSTY V++ +C
Sbjct: 204 MMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEM-VQRGISPDLSTYNCVVNALC 262
Query: 260 KRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDIS 315
K + +A +L +M +G+ DN T +S+IYG + G+ +EA +V +++ PD+
Sbjct: 263 KARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVV 322
Query: 316 LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
+ L+ L + + ++A VF M +G + + +Y ++L G+ K
Sbjct: 323 TLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATK 369
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 108/255 (42%), Gaps = 26/255 (10%)
Query: 214 VVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG----LSTYRIVIDWMCKRGKISQAYT 269
++ ++ + + EA+ + + RM LG + +Y IV+ +C K QA
Sbjct: 145 MISNLLRGLCEAKRTAEALDIL----LHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADE 200
Query: 270 MLEEMFKRGIEA--DNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKG 323
+L M + G + + +++I G G + +A + E+ + PD+S Y+ ++
Sbjct: 201 LLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNA 260
Query: 324 LLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG------------KRGRKGPDPL 371
L + R +A + R+M+ +G P TY L+ G+ K +G P
Sbjct: 261 LCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPD 320
Query: 372 VNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGK 431
V + L K GK DA + + +G + F Y L+ Y+ + +V E+
Sbjct: 321 VVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFN 380
Query: 432 KLREVGLADLADIFQ 446
+ G+A + IF
Sbjct: 381 LMLSDGIAPDSHIFN 395
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 59/306 (19%), Positives = 110/306 (35%), Gaps = 71/306 (23%)
Query: 97 LQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLC-Q 155
LQ M + + F + L ++ + N F G ++ + N ++ C
Sbjct: 485 LQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLV 544
Query: 156 RKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVV 215
K+ + + +S I+PN + YG L+ GYC VG + E ++ + +G +PS +
Sbjct: 545 GKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLY 604
Query: 216 DKMIETFFKINK-----------------------------------DDEAM-------- 232
+ ++ F+ + DEA+
Sbjct: 605 NIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHA 664
Query: 233 ---------------KVFQMMRVKRMDDLGLS-----------TYRIVIDWMCKRGKISQ 266
+FQ+ RV+ DL S TY I++ + K G + +
Sbjct: 665 MNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEE 724
Query: 267 AYTMLEEMFKRGIEADNLT-LSSIIYGLLARGRLREAYKVVEEIEKPDISLYHGLIKGLL 325
A M M G E N L+ ++ LL + + A + +I++ SL H L+
Sbjct: 725 ADDMFSSMENAGCEQPNSQLLNHVVRELLEKREIVRAGTYLSKIDERSFSLDHSTTTLLI 784
Query: 326 RLRRAR 331
L ++
Sbjct: 785 DLFSSK 790
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 152/326 (46%), Gaps = 14/326 (4%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHI 133
+T+N ++D + K+ + M +R L D T+ L A L +M +
Sbjct: 302 VTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDL 361
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M G + N ++ +++ V EA + K+ + + PN + YG +I C G
Sbjct: 362 MVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGS 421
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ +A + M DEG P+I V +I + +K D+A ++ M + R L +
Sbjct: 422 VDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEM-LDRGICLNTIFFN 480
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI--- 309
+I CK G++ ++ + + M + G++ + +T S++I G G++ EA K++ +
Sbjct: 481 SIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSV 540
Query: 310 -EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGP 368
KPD Y+ LI G R+ R +A +F+EM+ G P + TY ++LQG R
Sbjct: 541 GMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAA 600
Query: 369 DPLVNFDTIFVGGLVKAGKSLDAAKY 394
L +V G+ K+G L+ + Y
Sbjct: 601 KEL------YV-GITKSGTQLELSTY 619
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 163/365 (44%), Gaps = 34/365 (9%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHI 133
+T++ ++ + K + +D E L M + ++ N T+ L + K+ + F
Sbjct: 232 VTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKK 291
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M G E + N ++ LC+ EA+ + +++ ++P+ Y L++GY G
Sbjct: 292 MRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGA 351
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
L+E + +LM G P V + +I + K K DEAM VF MR ++ + TY
Sbjct: 352 LVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNP-NVVTYG 410
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP 312
VI +CK G + A E+M G+ + + +S+I+ L + +A +++ E+
Sbjct: 411 AVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDR 470
Query: 313 DISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGP 368
I L ++ +I + R E+ ++F M++ G +P + TY L+ G+
Sbjct: 471 GICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGY--------- 521
Query: 369 DPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN----EEGVV 424
AGK +A K + + + G++ YN ++ Y ++ +
Sbjct: 522 --------------CLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALA 567
Query: 425 MFEEV 429
+F+E+
Sbjct: 568 LFKEM 572
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 141/299 (47%), Gaps = 33/299 (11%)
Query: 149 VVKTLCQRKLVVEAKYLILK-LSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDE 206
++K LC K +A ++L+ ++E P+ + L+KG CD EA ++ ++M D+
Sbjct: 128 LLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADD 187
Query: 207 ---GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGK 263
G P + +I FFK D+A + M +R+ + TY +I +CK
Sbjct: 188 RGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISP-DVVTYSSIIAALCKGQA 246
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHG 319
+ +A +L M K G+ + +T +SI++G + + +EA ++++ +PD+ Y+
Sbjct: 247 MDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNS 306
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFV 379
L+ L + R+ EA ++F M KRG EP + TY LLQG+ K
Sbjct: 307 LMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATK----------------- 349
Query: 380 GGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
G LV+ LD ++ G+ +N + Y+ +E V V K+R+ GL
Sbjct: 350 GALVEMHALLDL------MVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGL 402
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 144/309 (46%), Gaps = 11/309 (3%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNID---LFWETLQEMGRRRLVNDKTFKIALMTL 118
+++ Q N +T+ ++ I+ KS ++D L++E + + G N + + +L
Sbjct: 394 FSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTP--NIIVYTSLIHSL 451
Query: 119 AEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNE 177
+ K M D G + N ++ + C+ V+E++ L L + +KPN
Sbjct: 452 CIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNV 511
Query: 178 IAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQM 237
I Y LI GYC G + EA+K+ + M G +P + +I + ++++ D+A+ +F+
Sbjct: 512 ITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKE 571
Query: 238 MRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
M V + TY I++ + + + A + + K G + + T + I++GL
Sbjct: 572 M-VSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNN 630
Query: 298 RLREAYKVVEEIEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYI 353
EA ++ + + D+ L ++ +I LL++ R EA +F G P TY
Sbjct: 631 LTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYR 690
Query: 354 MLLQGHLGK 362
++ + +G+
Sbjct: 691 LMAENIIGQ 699
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 106/252 (42%), Gaps = 42/252 (16%)
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV--- 306
TY I+I C+ G++ + L + K+G + +T + ++ GL A R +A +V
Sbjct: 89 TYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRR 148
Query: 307 --EEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKR---GCEPTMHTYIMLLQGHLG 361
E PD+ L+KGL R++EA ++ M G P + +Y ++ G
Sbjct: 149 MTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFF- 207
Query: 362 KRG---------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
K G R PD +V + +I + L K G+++D A V M + +P
Sbjct: 208 KEGDSDKAYSTYHEMLDRRISPD-VVTYSSI-IAALCK-GQAMDKAMEVLTTMVKNGVMP 264
Query: 407 R-FDYNKFLHYYSNEEGVVMFEEVG--KKLREVGLA-------DLADIFQRYGKKMATR- 455
YN LH Y + E E +G KK+R G+ L D + G+ R
Sbjct: 265 NCMTYNSILHGYCSSEQPK--EAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARK 322
Query: 456 --ERRRNRAIEP 465
+ R +EP
Sbjct: 323 IFDSMTKRGLEP 334
>gi|297734081|emb|CBI15328.3| unnamed protein product [Vitis vinifera]
Length = 532
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 151/350 (43%), Gaps = 19/350 (5%)
Query: 30 LSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRN 89
LS + + LQ N P + R V F+++ + P F H+ T + VD G+ ++
Sbjct: 114 LSFSHITPSPPLILQTLNTSPDAGRTVLGFYKWLS-SNPKFVHSDETISFFVDYFGRRKD 172
Query: 90 IDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMN-DCGCEYSLEMLNK 148
E L M R KT + A+ L ++V+FF M D G E L
Sbjct: 173 FKAIHEVL--MDGRNFAGAKTLESAIDRLVRAGRATQVVSFFDRMEVDYGFRRDRESLTM 230
Query: 149 VVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGF 208
VV LC+ A+ ++ ++ I PNE LIKG+C G L EA ++ M GF
Sbjct: 231 VVSKLCEHGFASHAEKVVKNVANEIFPNETICDLLIKGWCVDGKLDEARRLAEEMFRGGF 290
Query: 209 EPSIDVVDKMIETFFKINK-------DDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKR 261
E + +++ K+ + + EA K+ M V + + T+ ++I +CK
Sbjct: 291 EIGTMAYNSILDCICKLCRKKDPFRLESEAEKILVDMDVAGVPR-NVETFNVLITNLCKI 349
Query: 262 GKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP------DIS 315
K A + M + G + T + L R+ E ++++ ++ D
Sbjct: 350 RKTEDAMKLFYRMGEWGCYPNETTFLVLTRSLYQAARVGEGDEMIDRMKSAGFGNALDKK 409
Query: 316 LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
Y+ IK L + R A +F +M + GC+P + TY +L+ G L GR
Sbjct: 410 AYYEFIKILCGIERIDHAMSLFSKMKEDGCKPGIKTYDLLM-GKLCAHGR 458
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 70/153 (45%), Gaps = 4/153 (2%)
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGD 192
M+ G ++E N ++ LC+ + +A L ++ EW PNE + L +
Sbjct: 327 MDVAGVPRNVETFNVLITNLCKIRKTEDAMKLFYRMGEWGCYPNETTFLVLTRSLYQAAR 386
Query: 193 LIEASKIWNLMTDEGFEPSID--VVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
+ E ++ + M GF ++D + I+ I + D AM +F M+ G+ T
Sbjct: 387 VGEGDEMIDRMKSAGFGNALDKKAYYEFIKILCGIERIDHAMSLFSKMKEDGCKP-GIKT 445
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADN 283
Y +++ +C G++ +A + E RG+ ++
Sbjct: 446 YDLLMGKLCAHGRLDKANALFSEAVNRGVPVES 478
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 140/299 (46%), Gaps = 29/299 (9%)
Query: 147 NKVVKTLCQRKLVVEAK-YLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N ++ C+ K + EA+ YL+ L ++PN YG I GY G++ A + +N M
Sbjct: 490 NSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLS 549
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKIS 265
G P++ + +IE K EA VF+ + +R+ + TY ++I + + GK+
Sbjct: 550 CGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQ-DVQTYSVLIHGLSRNGKMH 608
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLI 321
+A+ + E+ ++G+ + T +S+I G +G + +A +++EE+ PDI Y+ LI
Sbjct: 609 EAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILI 668
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGG 381
GL + A +F ++ RG P TY ++ G+ K +P F
Sbjct: 669 DGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYC-----KSKNPTAAF------- 716
Query: 382 LVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLAD 440
+ +E ++ RGV F YN L++ EE ++ +++ E G A
Sbjct: 717 -----------QLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFAS 764
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 157/385 (40%), Gaps = 73/385 (18%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-----------------KTFK 112
F + ++ N ++ + K ++LFW+ M +++ D K K
Sbjct: 185 FRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAK 244
Query: 113 IALMTLAE-VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE 171
L+ + E R L + + M D G L + ++ C K EAK ++L++ +
Sbjct: 245 RVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMID 304
Query: 172 -WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDE 230
+KP I Y LI G+ GD+ +A +I + M G E ++ +
Sbjct: 305 VGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLII---------------- 348
Query: 231 AMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
+ +++ +CK GK+ +A +++EM ++G+E D+ T S +I
Sbjct: 349 --------------------WNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLI 388
Query: 291 YGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
G + A+++++E++K P + Y +I GL R + + REM+ G +
Sbjct: 389 EGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLK 448
Query: 347 PTMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAK 393
P Y L+ H K GR +G P V + G KA + +A
Sbjct: 449 PNAVVYTTLMTAH-AKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEART 507
Query: 394 YVERVMNRGVEVPRFDYNKFLHYYS 418
Y+ ++ R + Y F+ YS
Sbjct: 508 YLMEMLERRLRPNAHTYGAFIDGYS 532
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 103/496 (20%), Positives = 201/496 (40%), Gaps = 110/496 (22%)
Query: 46 CNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFN----RMVDIIGKSRNIDLFWETLQEMG 101
C +F RP+ + KA + ++T N R + + S N W+ L E
Sbjct: 6 CRSFMAKPRPI------SHKAASFSSSQALTQNEDSVREITTLLNSHN----WQALMESS 55
Query: 102 R--RRLVNDKTFKIALMTLAEVRELKKMVNFF----HIMNDCGCEYSLEMLNKVVKTLCQ 155
++L D + L +V + K+++NFF H M + L++L+ + LC
Sbjct: 56 DIPKKLNTDIIRSVILQN--QVGDPKRLLNFFYWSQHKMGTSTAQQDLDVLSALAVNLCN 113
Query: 156 RKLVVEAKYLI-----------LKLSEWIK--------PNEIAYGWLIKGYCDVGDLIEA 196
A LI L +K PN + + L+ Y +G L+EA
Sbjct: 114 SNWYGPASDLIKCIIRNSDSPLAVLGSIVKCYRSCNGSPNSVIFDMLMDSYRKMGFLVEA 173
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM------------------ 238
++ + F PS+ + ++ K NK + KVF M
Sbjct: 174 VNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISA 233
Query: 239 -----------RV------------------KRMDDLGLS----TYRIVIDWMCKRGKIS 265
RV + M D GL TY I+I+ C +
Sbjct: 234 HCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSR 293
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLI 321
+A ML EM G++ + +T +++I G + +G + +A+++ +E+ + ++ +++ L+
Sbjct: 294 EAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLL 353
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------------LGKRGRKGPD 369
G+ + + +A ++ +EM+++G EP TY +L++GH L + ++
Sbjct: 354 NGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLA 413
Query: 370 PLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEV 429
P V ++ + GL + G + ++ G++ Y + ++ E V +
Sbjct: 414 PTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMI 473
Query: 430 GKKLREVGLADLADIF 445
+++RE G+ L D+F
Sbjct: 474 LERMREQGI--LPDVF 487
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/300 (20%), Positives = 129/300 (43%), Gaps = 42/300 (14%)
Query: 100 MGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLV 159
+ RR L + +T+ + + L+ ++ + F + + G + N ++ C++ V
Sbjct: 583 LSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNV 642
Query: 160 VEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKM 218
+A L+ ++ + I P+ + Y LI G C G++ A +++ + G P+ M
Sbjct: 643 DKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAM 702
Query: 219 IETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRG 278
++ + K A ++ + M ++ + Y +++++ CK K +A + +EM ++G
Sbjct: 703 VDGYCKSKNPTAAFQLLEEMLLRGVPPDAF-IYNVILNFCCKEEKFEKALDLFQEMLEKG 761
Query: 279 IEADNLTLSSIIYGLLARGRLREAYKVVEE-IEK-------------------------- 311
A ++ +++I G G+L+EA ++EE IEK
Sbjct: 762 F-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAK 820
Query: 312 ------------PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
P Y L+ G + E + +F EM+ +G EP TY +++ +
Sbjct: 821 RLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAY 880
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 114/247 (46%), Gaps = 10/247 (4%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N +T+ MVD KS+N ++ L+EM R + D + + L + + +K ++ F
Sbjct: 695 NCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLF 754
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
M + G ++ N +++ C+ + EA +L+ ++ E PN + Y LI C
Sbjct: 755 QEMLEKGFASTVS-FNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKA 813
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G + EA ++W M + P+ ++ + I E +F+ M K ++ + T
Sbjct: 814 GMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKM-T 872
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADN------LTLSSIIYGLLARGRLREAYK 304
Y ++ID C+ G + +A + +E+ +G+ + T S I G G + EA +
Sbjct: 873 YYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAE 932
Query: 305 VVEEIEK 311
V+ + K
Sbjct: 933 VLRSMVK 939
>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
Length = 621
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 155/361 (42%), Gaps = 51/361 (14%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQR-KLVVEAKYLILK 168
T+ L L +++ + F M C + +V LC+ + L
Sbjct: 144 TYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEA 203
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
+S +PN + Y LI GYC+ G++ A K++ M P++ ++I K K
Sbjct: 204 MSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKV 263
Query: 229 DEAMKVFQMM------------------------------RVKRMDDLGLS----TYRIV 254
+ AM +F M + M+ GL T+ ++
Sbjct: 264 ERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVL 323
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA----YKVVEEIE 310
ID +CKR K+ +A L + K+G++ + + +S+I GL G++ A K++ E
Sbjct: 324 IDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGF 383
Query: 311 KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGP-- 368
PD Y LI GL R ++ +AT + +M+++G + + TY +++ + + G +GP
Sbjct: 384 VPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKK 443
Query: 369 ----------DPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYS 418
+P + T+FV + G+ DA + ++++RGV YN + Y+
Sbjct: 444 IFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYA 503
Query: 419 N 419
N
Sbjct: 504 N 504
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 125/322 (38%), Gaps = 53/322 (16%)
Query: 143 LEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNL 202
L LN ++ L + ++ + + L ++ N Y LI YC GD+ A +
Sbjct: 41 LRCLNTLLMALARHRMFPDMESLASRMPAR---NLRTYTTLINAYCLAGDIPAAKQHLTS 97
Query: 203 MTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK--------------------- 241
+ G P + + + A +VF +M ++
Sbjct: 98 LLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGM 157
Query: 242 -----------RMDDLGLST--YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
R D T Y ++ +C+ G+ +A +LEE G E + + ++
Sbjct: 158 VREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNA 217
Query: 289 IIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+I G G + A KV E ++ P++ Y LI GL + + A +F M++ G
Sbjct: 218 LIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAG 277
Query: 345 CEPTMHTYIMLLQ-----GHLGKRGR----KGPDPLVNFD---TIFVGGLVKAGKSLDAA 392
EP + TY L+Q GHL R + LV D ++ + L K K +A
Sbjct: 278 LEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQ 337
Query: 393 KYVERVMNRGVEVPRFDYNKFL 414
++ ++ +GV+V Y +
Sbjct: 338 LFLGSLVKKGVKVNEVVYTSLI 359
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/272 (19%), Positives = 123/272 (45%), Gaps = 7/272 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
N +T+ ++ ++ + L M LV ND TF + + L + ++++ F
Sbjct: 281 NVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFL 340
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
+ G + + + ++ LC+ + A L+ K+ SE P+ +Y LI G C
Sbjct: 341 GSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQ 400
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
L +A+ + M ++G + S +I+ + + K+F M ++ + T
Sbjct: 401 KKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINP-DIVT 459
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y + + C+ G++ A +M+ +M RG+ + +T +++I G G + +A+ E +
Sbjct: 460 YTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMV 519
Query: 311 ----KPDISLYHGLIKGLLRLRRAREATQVFR 338
KP+ Y L++ +++ + + +++
Sbjct: 520 GKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWK 551
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 49/260 (18%), Positives = 106/260 (40%), Gaps = 42/260 (16%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N + + ++D + K+ ID E +Q+M V D ++ + L ++L +
Sbjct: 351 NEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLML 410
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK--LSEWIKPNEIAYGWLIKGYCD 189
M + G + S ++ L R++ E I ++ I P+ + Y ++ YC+
Sbjct: 411 EDMMEKGIQASPVTYTIIIDELV-REVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCE 469
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM----------- 238
G + +A + M D G P++ + +I + + +A F++M
Sbjct: 470 EGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDS 529
Query: 239 ---------------------RVKRMDDLGLSTY-----RIVIDWMCKRGKISQAYTMLE 272
++ M DL S Y +I+I + ++G +++ ++L
Sbjct: 530 YTVLLRLVVKKSSSDNSVDIWKIADMKDLQESNYDEIVWKILIYGLLQKGSVAEFSSLLS 589
Query: 273 EMFKRGIEADNLTLSSIIYG 292
M + G + N T++++I G
Sbjct: 590 VMKEHGYQPSN-TINAMITG 608
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 70/206 (33%), Gaps = 51/206 (24%)
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
RM L TY +I+ C G I A L + G+ D+ +S + G G L
Sbjct: 64 ASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGML 123
Query: 300 REAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
A + VF M RGC T TY LL G
Sbjct: 124 THACR-------------------------------VFVLMPLRGCLRTAFTYTALLHGL 152
Query: 360 LG--------------KRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEV 405
LG + PD V V GL +AG++ +A +E M+ G E
Sbjct: 153 LGAGMVREAMAVFVGMRADSCAPDTHVY--ATMVHGLCEAGRTEEAEVLLEEAMSNGFEP 210
Query: 406 PRFDYNKFLHYYSN----EEGVVMFE 427
YN + Y N E + +FE
Sbjct: 211 NIVVYNALIDGYCNAGEMEHALKVFE 236
>gi|410109897|gb|AFV61028.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
macropoda]
Length = 412
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 150/319 (47%), Gaps = 29/319 (9%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T + L L +++ K + F+ + +CG SL N ++ C+ + A+ + +
Sbjct: 90 TCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAI 149
Query: 170 SEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++W ++P+ ++Y L+ GY +GDL E ++ + M G +P + +I K +K
Sbjct: 150 TKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKM 209
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
D+A ++F M VK + G+ T+ +ID CK G++ A + ++M + + D +T ++
Sbjct: 210 DDANELFDEMLVKGLVPNGV-TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 268
Query: 289 IIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+IYGL +G L++A+ +++E+ KPD Y LI G + A + + MI+
Sbjct: 269 LIYGLCKKGDLKQAHHLIDEMSMKELKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQEN 328
Query: 345 CEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVE 404
Y T + GL + G+S+DA K + ++N G++
Sbjct: 329 IRLDEVAY-----------------------TALISGLCQEGRSVDAEKMLREMLNVGLK 365
Query: 405 VPRFDYNKFLHYYSNEEGV 423
Y ++ + + V
Sbjct: 366 PDSRTYTMIINEFCKKGDV 384
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 101/215 (46%), Gaps = 6/215 (2%)
Query: 149 VVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEG 207
++ LC+ + +A L + L + + PN + + LI G+C G + A +I+ M +
Sbjct: 199 LINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 258
Query: 208 FEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQA 267
P + + +I K +A + M +K + + TY +ID CK G + A
Sbjct: 259 LSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKI-TYTTLIDGCCKEGDLDSA 317
Query: 268 YTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKG 323
+ + M + I D + +++I GL GR +A K++ E+ KPD Y +I
Sbjct: 318 FEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPDSRTYTMIINE 377
Query: 324 LLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+ + +++ +EM + G P++ TY +L+ G
Sbjct: 378 FCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 412
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 95/230 (41%), Gaps = 49/230 (21%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
N +TF ++D K+ +DL E ++M + L D
Sbjct: 227 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPD------------------------ 262
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVG 191
L N ++ LC++ + +A +LI ++S + +KP++I Y LI G C G
Sbjct: 263 ----------LITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKITYTTLIDGCCKEG 312
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS-- 249
DL A + M E +I + + +A K+ ++ M ++GL
Sbjct: 313 DLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKM-----LREMLNVGLKPD 367
Query: 250 --TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
TY ++I+ CK+G + + +L+EM + D S + Y +L G
Sbjct: 368 SRTYTMIINEFCKKGDVWKGSKLLKEM-----QRDGHVPSVVTYNVLMNG 412
>gi|298204849|emb|CBI34156.3| unnamed protein product [Vitis vinifera]
Length = 442
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/448 (23%), Positives = 191/448 (42%), Gaps = 57/448 (12%)
Query: 53 WRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFK 112
P FF +Q F S+ FN + D + F L +V+ F
Sbjct: 2 LSPPLPFFSSSQNN---FHSKSLHFNTLDDALSS------FNRLLHMHPPPSIVD---FA 49
Query: 113 IALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLV-----VEAKYLIL 167
L ++A+++ +++ M+ G ++ LN ++ + C V V AK IL
Sbjct: 50 KLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAK--IL 107
Query: 168 KLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINK 227
KL +P+ + LI+G C G + EA +++ M DEGF+P++ +I K+
Sbjct: 108 KLGH--QPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGN 165
Query: 228 DDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLS 287
A+++ + M + Y +ID +CK ++++A+ + +M +GI D T +
Sbjct: 166 TSAAIRLLRSMEQGNCQP-DVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYT 224
Query: 288 SIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
S+++ L + ++ ++ PD+ ++ ++ L + + EA ++ MI+R
Sbjct: 225 SLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQR 284
Query: 344 GCEPTMHTYIMLLQGHLGKRG------------RKGPDP-LVNFDTIFV------GGLVK 384
G EP + TY L+ GH + RKG P ++++ T+ GGLV
Sbjct: 285 GVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINAGKKDGGGLVS 344
Query: 385 AGKSLDAAKYVERVMNRG-VEVPRFDYNKFLHYYSNEEGVVMFEE-VGKKLRE--VGLAD 440
+ + K + G VEV R D K E+G + E V K+ V +
Sbjct: 345 LQEVIGLVKETPDAVKGGAVEVIRKDKMKLF-----EKGRTLLNEMVNSKIMPNVVIFST 399
Query: 441 LADIFQRYGKKMATR---ERRRNRAIEP 465
+ D + GK M + R +EP
Sbjct: 400 VVDALCKEGKVMEAHDVVDMMIKRGVEP 427
>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
Length = 933
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 173/388 (44%), Gaps = 25/388 (6%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKT-FKIALMTLAEVRELKKMVNFF 131
+ + + ++D + K+ ++ ++ QE+ R ++ D + + + L + + K+ +F
Sbjct: 518 DHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFL 577
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI--LKLSEWIKPNEIAYGWLIKGYCD 189
M + G + N ++ + C++ +A L+ +K+S IKPN I Y L+ G
Sbjct: 578 TEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSS-IKPNLITYNTLVAGLFG 636
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ-MMRVKRMDDLGL 248
G + +A + N M GF PS ++++ + + D + + + MM D+
Sbjct: 637 TGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADI-- 694
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY----K 304
+ Y ++ +C G +A +LEEM GI D +T +++I G L A+ +
Sbjct: 695 TVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQ 754
Query: 305 VVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
++ + P+I+ ++ L+ GL + R EA V EM K G EP TY +L GH GK+
Sbjct: 755 MLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGH-GKQS 813
Query: 365 R-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
KG P V+ + KAG A + + + RGV Y+
Sbjct: 814 NKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYD 873
Query: 412 KFLHYYSNEEGVVMFEEVGKKLREVGLA 439
+ +S ++ K ++E G +
Sbjct: 874 ILVSGWSRIRNGTEVKKCLKDMKEKGFS 901
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 144/312 (46%), Gaps = 29/312 (9%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALM----TLAEVRELKK 126
A N +T+ ++D + K+ L EM R +V D ALM + E+K
Sbjct: 306 APNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKD 365
Query: 127 MVNFF--HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWL 183
+ F ++ G Y++ ++ LC+ V EA+ ++L++ E I PN + + +
Sbjct: 366 TLRFALSDNLSPNGVTYTV-----LIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSV 420
Query: 184 IKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM 243
I G+ G L +A++ +M + G P++ +I+ FFK D A++V+ M +
Sbjct: 421 INGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCE-- 478
Query: 244 DDLGLSTYRIVIDWMC----KRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
G+ + ++D + + GKI +A + ++ G+ D++ +++I GL G +
Sbjct: 479 ---GVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDM 535
Query: 300 REAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
A+K +E+ PD +Y+ I L L + +EA EM G +P TY +
Sbjct: 536 PTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTM 595
Query: 356 LQGHLGKRGRKG 367
+ H RKG
Sbjct: 596 IVSHC----RKG 603
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 89/179 (49%), Gaps = 6/179 (3%)
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
GD A + + MT +G + + ++ F + + D A V MM+ +D ++T
Sbjct: 183 GDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDP-NVAT 241
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y I + C+ + +A+ + E M + G+ D +TLS+++ GL GR EAY + E++
Sbjct: 242 YTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMD 301
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
K P+ Y LI L + R +E + EM+ RG + TY L+ LGK+G+
Sbjct: 302 KVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMD-WLGKQGK 359
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 127/301 (42%), Gaps = 48/301 (15%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
+ N +T+ ++D + K+ N+D + L EM +K+ ++T + V
Sbjct: 375 LSPNGVTYTVLIDALCKAHNVDEAEQVLLEM------EEKSISPNVVTFSSV-------- 420
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYC 188
+N VK R L+ +A +Y + I PN + YG LI G+
Sbjct: 421 ----------------INGFVK----RGLLDKATEYKRMMKERGINPNVVTYGTLIDGFF 460
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
A ++++ M EG + + +VD ++ + K +EAM +F K GL
Sbjct: 461 KFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALF-----KDASGSGL 515
Query: 249 S----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK 304
S Y +ID + K G + A+ +E+ R + D + + I L G+ +EA
Sbjct: 516 SLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKS 575
Query: 305 VVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL 360
+ E+ KPD S Y+ +I R +A ++ EM +P + TY L+ G
Sbjct: 576 FLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLF 635
Query: 361 G 361
G
Sbjct: 636 G 636
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 122/288 (42%), Gaps = 20/288 (6%)
Query: 146 LNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
L+ +V LC+ EA L ++ + PN + Y LI G E + M
Sbjct: 277 LSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMV 336
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
G + +++ K K DE + + G+ TY ++ID +CK +
Sbjct: 337 SRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGV-TYTVLIDALCKAHNV 395
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA--YK--VVEEIEKPDISLYHGL 320
+A +L EM ++ I + +T SS+I G + RG L +A YK + E P++ Y L
Sbjct: 396 DEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTL 455
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG---------RKGPDPL 371
I G + + A +V+ +M+ G + L+ G L + G +
Sbjct: 456 IDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNG-LRQNGKIEEAMALFKDASGSG 514
Query: 372 VNFD----TIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
++ D T + GL KAG A K+ + +M+R + YN F++
Sbjct: 515 LSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFIN 562
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 141/334 (42%), Gaps = 39/334 (11%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N +V C+ V A+ ++ + E + PN Y I YC + EA ++ M
Sbjct: 208 NTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVR 267
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKR 261
G + + ++ + + EA +F + MD +G + TY +ID + K
Sbjct: 268 NGVLLDVVTLSALVAGLCRDGRFSEAYALF-----REMDKVGAAPNHVTYCTLIDSLAKA 322
Query: 262 GKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK----VVEEIEKPDISLY 317
G+ + ++L EM RG+ D +T ++++ L +G+ E + + P+ Y
Sbjct: 323 GRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTY 382
Query: 318 HGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG------------- 364
LI L + EA QV EM ++ P + T+ ++ G + KRG
Sbjct: 383 TVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFV-KRGLLDKATEYKRMMK 441
Query: 365 RKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYV-ERVMNRGVEVPRFDYNKFLHYYSN--- 419
+G +P +V + T+ G G+ DAA V ++ GV+V +F + ++
Sbjct: 442 ERGINPNVVTYGTLIDGFFKFQGQ--DAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGK 499
Query: 420 -EEGVVMFEEV---GKKLREVGLADLADIFQRYG 449
EE + +F++ G L V L D + G
Sbjct: 500 IEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAG 533
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 54/279 (19%), Positives = 117/279 (41%), Gaps = 12/279 (4%)
Query: 36 NLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSIT-FNRMVDII---GKSRNID 91
+LTH LQ C+ R + + + H IT +N ++ ++ G +R
Sbjct: 659 SLTHRRVLQACSQ----SRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKAT 714
Query: 92 LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVK 151
+ E + +G + TF ++ + L + M ++ N ++
Sbjct: 715 VVLEEM--LGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLG 772
Query: 152 TLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEP 210
L + EA +++++ + ++PN + Y L G+ + +EA +++ M +GF P
Sbjct: 773 GLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVP 832
Query: 211 SIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTM 270
+ + +I F K +A ++F+ M+ KR TY I++ + ++
Sbjct: 833 KVSTYNALISDFTKAGMMTQAKELFKDMQ-KRGVHPTSCTYDILVSGWSRIRNGTEVKKC 891
Query: 271 LEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
L++M ++G TLS I G +A ++++ +
Sbjct: 892 LKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNL 930
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 153/342 (44%), Gaps = 26/342 (7%)
Query: 111 FKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQ-RKLVVEAKYL--IL 167
F L ++ ++ +++ + M+ G ++ LN ++ + C +L L IL
Sbjct: 57 FSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDIL 116
Query: 168 KLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINK 227
KL +P+ + LI+G C G + EA ++++ MT EGF+P + +I K+
Sbjct: 117 KLG--YQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGN 174
Query: 228 DDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLS 287
A++ + M +R + Y +ID +CK ++++A ++ +M +GI +N T S
Sbjct: 175 TSTAIRFLRSME-QRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYS 233
Query: 288 SIIYGLLARGRLREA----YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
S+I+GL G +EA Y ++ PD ++ L+ L + +A V MI+
Sbjct: 234 SLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQS 293
Query: 344 GCEPTMHTYIMLLQGH-----LGKR-------GRKGPDPLVNFDTIFVGGLVKAGKSLDA 391
+P + TY L+ GH +GK RKG P V T + G K A
Sbjct: 294 DLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKA 353
Query: 392 AKYVERVMNRGVEVPRFDYNKFLHYYSN----EEGVVMFEEV 429
E + +G+ YN +H + + + +F E+
Sbjct: 354 MGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEM 395
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 143/291 (49%), Gaps = 7/291 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVR-ELKKMVNFF 131
+ +TFN +VD + K + + M + L D +LM +R E+ K VN F
Sbjct: 263 DQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVF 322
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDV 190
M GC S+ ++ C+ +++ +A L ++S+ + P+ + Y LI G C V
Sbjct: 323 DTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHV 382
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G L +A +++ M G P + + + K ++ EAM + +++ +D +
Sbjct: 383 GRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDP-DIHI 441
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y IV+D MC+ G++ A + ++ +G+ D T + +I GL +G L EA K+ E++
Sbjct: 442 YSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMD 501
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
+ P+ Y+ + +G LR A Q+F+EM+ RG + T +L++
Sbjct: 502 ENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVE 552
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 145/326 (44%), Gaps = 40/326 (12%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHI 133
+ ++ ++D + K R + +M + + N+ T+ + L + K+ + F+
Sbjct: 195 VVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYA 254
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGD 192
M N +V LC+ +VV+A Y++ + + +KP+ + Y L+ G+C +
Sbjct: 255 MIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSE 314
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM-------------- 238
+ + +++ M +G PS+ +I + KI D+AM +F+ M
Sbjct: 315 MGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNT 374
Query: 239 ------RVKRMDDL--------------GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRG 278
V R+ D L TYRI+ D++CK ++++A +L+ +
Sbjct: 375 LIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTN 434
Query: 279 IEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREAT 334
++ D S ++ G+ G L A + ++ PD+ Y +I GL + EA+
Sbjct: 435 LDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEAS 494
Query: 335 QVFREMIKRGCEPTMHTYIMLLQGHL 360
++F EM + GC P TY ++ +G L
Sbjct: 495 KLFGEMDENGCSPNACTYNLITRGFL 520
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 168/380 (44%), Gaps = 34/380 (8%)
Query: 83 IIGKSRN--IDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIMNDCGC 139
I+G +N ID + ++M R + D ++ I + LA+ +L N F + G
Sbjct: 295 ILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGV 354
Query: 140 EYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASK 198
S ++ LC +A+ L ++ P+ + Y +I C G L EA
Sbjct: 355 TPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACD 414
Query: 199 IWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM---------RVKRMDDLGLS 249
+ M ++G P + + +++ K ++ +EA+ +F M R LGL
Sbjct: 415 LIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGL- 473
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
+ ID C+RGK+ +A+ +L+ M G D +T S++I GL + R+ +A ++E++
Sbjct: 474 CQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDM 533
Query: 310 EK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL----G 361
K P + + LI GL + R +EA +V M+ G P + TY L+ GH
Sbjct: 534 VKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQT 593
Query: 362 KRGR--------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
+R R +G P V T V GL KA + +A ++ + G F Y
Sbjct: 594 ERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTAL 653
Query: 414 LHYYSN----EEGVVMFEEV 429
+ + + + G+ +F E+
Sbjct: 654 ILGFCSAGQVDGGLKLFGEM 673
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 134/306 (43%), Gaps = 34/306 (11%)
Query: 58 LFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALM 116
LF ++ P + +T+N M+D K ++ + +++M V D T+ +
Sbjct: 380 LFADMNRRGCP---PSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMD 436
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPN 176
L + +++ + F+ M GC + N ++ LCQ+ + +A
Sbjct: 437 GLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQA-------------- 482
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
C G L EA ++ MTD+G P + +I I + D+A + +
Sbjct: 483 -----------CQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLE 531
Query: 237 MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR 296
M VKR + T +I +CK G+I +A +L+ M G D +T +++++G
Sbjct: 532 DM-VKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRA 590
Query: 297 GRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
G+ A +++ ++ P++ Y L+ GL + R EA VF +M GC P + TY
Sbjct: 591 GQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTY 650
Query: 353 IMLLQG 358
L+ G
Sbjct: 651 TALILG 656
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 140/332 (42%), Gaps = 68/332 (20%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N V+ LCQ + EA + K++E + P+ +YG LI G G L +A ++ +
Sbjct: 292 NIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLH 351
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKIS 265
G PS +I N D+A ++F M +R TY ++ID CKRG +
Sbjct: 352 SGVTPSTVAYTSLIHGLCMANSFDDARELFADMN-RRGCPPSPVTYNVMIDASCKRGMLE 410
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK-------------- 311
+A ++++M + G D +T ++++ GL R+ EA + E+E+
Sbjct: 411 EACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTII 470
Query: 312 ----------------------------------PDISLYHGLIKGLLRLRRAREATQVF 337
PD+ Y LI GL + R +A +
Sbjct: 471 LGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLL 530
Query: 338 REMIKRGCEPTMHTYIMLLQGHLGKRGR---------------KGPDPLVNFDTIFVGGL 382
+M+KR C+PT+ T L+ G L K GR + PD +V ++T+ V G
Sbjct: 531 EDMVKRQCKPTVVTQNTLIHG-LCKAGRIKEAREVLDAMVSSGQSPD-VVTYNTL-VHGH 587
Query: 383 VKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
+AG++ A + + ++ RG+ Y +
Sbjct: 588 CRAGQTERARELLSDMVARGLAPNVVTYTALV 619
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 142/348 (40%), Gaps = 18/348 (5%)
Query: 71 AHNSITFN----RMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELK 125
+HN+I +D + +D + L+ M V D T+ + L + +
Sbjct: 465 SHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVD 524
Query: 126 KMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLI 184
+ M C+ ++ N ++ LC+ + EA+ ++ +S P+ + Y L+
Sbjct: 525 DARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLV 584
Query: 185 KGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD 244
G+C G A ++ + M G P++ ++ K N+ EA VF M+
Sbjct: 585 HGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCA 644
Query: 245 DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK 304
L TY +I C G++ + EM GI D++ ++ L GR A +
Sbjct: 645 P-NLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALE 703
Query: 305 VVEE------IEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
++ E E +Y + GLL + A R+M++ G P L+ G
Sbjct: 704 ILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAG 763
Query: 359 HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLD-AAKYVERVMNRGVEV 405
L K G+ G V + + L GK+ AAK+VE ++ +G E+
Sbjct: 764 -LCKSGQGGEARAVLEEIM---DLAYGGKARGKAAKFVEEMVGKGYEI 807
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 93/173 (53%), Gaps = 2/173 (1%)
Query: 171 EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDE 230
+ I P + + +I+G+C+VG EA KI++LM +E P DV + +I++ K + +
Sbjct: 4 QGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLM-EECHSPYPDVYNVLIDSLSKRQETEA 62
Query: 231 AMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
K+ Q+M V R T+ ++ +CK GK+ +A +++EM R I T S +
Sbjct: 63 VKKMVQVM-VDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLA 121
Query: 291 YGLLARGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
+ L RG + A++++E + + S Y+ ++ L + R +A ++ R M ++
Sbjct: 122 HELCLRGSMERAFQLLEIMPVANSSAYNIVVVALCKAARVDDALELARTMSEK 174
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 105/242 (43%), Gaps = 9/242 (3%)
Query: 126 KMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLI 184
+ V F +M +C Y ++ N ++ +L +R+ K ++ + + P+ + ++
Sbjct: 28 EAVKIFSLMEECHSPYP-DVYNVLIDSLSKRQETEAVKKMVQVMVDRGCFPDSFTFTTIL 86
Query: 185 KGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD 244
G C G + EA + + M P + + A ++ ++M V
Sbjct: 87 CGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCLRGSMERAFQLLEIMPVANS- 145
Query: 245 DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK 304
S Y IV+ +CK ++ A + M ++ I +L S++ GL+ GR+ EA +
Sbjct: 146 ----SAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQ 201
Query: 305 VVEEIEK-PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
V E + P + + L++G + +A ++ R M C P +Y +L G L K
Sbjct: 202 VYRENRREPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDG-LCKA 260
Query: 364 GR 365
GR
Sbjct: 261 GR 262
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 62/146 (42%), Gaps = 27/146 (18%)
Query: 274 MFKRGIEADNLTLSSIIYGLLARGRLREAYKV---VEEIEKPDISLYHGLIKGLLRLRRA 330
MF++GI L +S+I G GR EA K+ +EE P +Y+ LI L + +
Sbjct: 1 MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECHSPYPDVYNVLIDSLSKRQET 60
Query: 331 REATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLD 390
++ + M+ RGC P T+ T + GL KAGK +D
Sbjct: 61 EAVKKMVQVMVDRGCFPDSFTF-----------------------TTILCGLCKAGK-MD 96
Query: 391 AAKYVERVMNRGVEVPRFDYNKFLHY 416
A+ V M + P F + FL +
Sbjct: 97 EAELVMDEMRSRMIPPYFATSSFLAH 122
>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 158/369 (42%), Gaps = 62/369 (16%)
Query: 86 KSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEM 145
+S+++D + +EM R N+ ++ + L E + + V+ F M D C ++
Sbjct: 239 RSKDVDSAFRVFEEMPNR---NEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYT 295
Query: 146 LNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
++K LC++ + L L + P+ I Y LI G C G L A ++ +LM +
Sbjct: 296 YTALIKGLCRKNVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKE 355
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKIS 265
G P I+ K N+ +EA ++F + + + + Y ++ID CK GK+
Sbjct: 356 RGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGV-SANVIMYSVLIDGYCKVGKVD 414
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISLYHGLIKGLL 325
+A + E+M + + T +++I+GL + G L+EA
Sbjct: 415 EAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEAL---------------------- 452
Query: 326 RLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKA 385
+F +M+K G +PT++T+ I +G ++K
Sbjct: 453 ---------SLFDQMVKMGLKPTVYTF-----------------------NILIGRMLKQ 480
Query: 386 GKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLA----DL 441
G DA K ++++M+ G + YN F+ Y + V E++ +++E G+
Sbjct: 481 GDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTY 540
Query: 442 ADIFQRYGK 450
+ + YGK
Sbjct: 541 TSLIKAYGK 549
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 134/321 (41%), Gaps = 14/321 (4%)
Query: 69 CFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKM 127
C N T+ ++ + + +N+ L EM R LV D T+ + L
Sbjct: 288 CCYPNVYTYTALIKGLCR-KNVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSA 346
Query: 128 VNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKG 186
+M + G + LC+ V EA+ L L+E + N I Y LI G
Sbjct: 347 YRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDG 406
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
YC VG + EA ++ M + P+ + +I EA+ +F M VK
Sbjct: 407 YCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQM-VKMGLKP 465
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
+ T+ I+I M K+G A+ L++M G + T ++ I + G+++EA ++
Sbjct: 466 TVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMM 525
Query: 307 ----EEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
EE PD Y LIK +L A V + M CEP+ HT++ L++ K
Sbjct: 526 VQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDK 585
Query: 363 R------GRKGPDPLVNFDTI 377
R G G + + NF +
Sbjct: 586 RYVVEKSGETGVESVSNFGDV 606
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 118/271 (43%), Gaps = 17/271 (6%)
Query: 183 LIKGYCDVGDLIEASKIWNLMT-DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK 241
+IK D + S I M+ D+ + S+ ++++ + DE +++ M ++
Sbjct: 127 MIKCCYSAPDALFVSDICRKMSKDDITKLSLKCYNELLTLLARFGLVDEMNQLYTEM-LE 185
Query: 242 RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
+ + T+ ++I+ CK G + +A + +M + G+ D T +S I G +
Sbjct: 186 EFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDS 245
Query: 302 AYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG 361
A++V EE+ + Y+ LI GL R EA +F M C P ++TY L++G
Sbjct: 246 AFRVFEEMPNRNEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCR 305
Query: 362 KRGRKG-------------PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRF 408
K K PD L+ ++++ + G +AG A + + + RG+ +
Sbjct: 306 KNVHKAMGLLDEMLERNLVPD-LITYNSL-IAGQCRAGHLDSAYRLLSLMKERGLVPDQR 363
Query: 409 DYNKFLHYYSNEEGVVMFEEVGKKLREVGLA 439
Y F+ + V + L E G++
Sbjct: 364 TYGCFIDFLCKSNRVEEARRLFDSLTEEGVS 394
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 74/361 (20%), Positives = 139/361 (38%), Gaps = 73/361 (20%)
Query: 73 NSITFNRMVDIIGKSRNID---LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
N+ TFN ++ + + N+ ++ + +MG + V TF I + + + +
Sbjct: 431 NAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTV--YTFNILIGRMLKQGDFDDAHK 488
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYC 188
M G + N ++ C V EA+ +++++ E + P++ Y LIK Y
Sbjct: 489 CLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYG 548
Query: 189 DVGDLIEASKIWNLMTDEGFEPS----IDVVDKMIETFFKINKDDE-------------A 231
+G A + M D EPS + ++ ++ + + + K E
Sbjct: 549 KLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPG 608
Query: 232 MKVFQMMRV-------KRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIE 280
+++MM + M+ G + Y +I +CK + A +L++M K GI
Sbjct: 609 SNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGIS 668
Query: 281 ADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDI----SLYHGL------------ 320
+ +++I + EA +VE++ P + +L GL
Sbjct: 669 PSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSV 728
Query: 321 -------------------IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG 361
I G+L+ E +Q+F EM K GC + TY +L Q G
Sbjct: 729 FKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSILTQKLHG 788
Query: 362 K 362
K
Sbjct: 789 K 789
>gi|410109943|gb|AFV61051.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rotundifolia]
Length = 425
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 140/288 (48%), Gaps = 41/288 (14%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T + L L +++ K + F+ + +CG SL N ++ C+ + A+ + +
Sbjct: 103 TCRKVLEHLMKLKYFKLVWGFYEDILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAI 162
Query: 170 SEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++W ++P+ ++Y L+ GY +GDL E ++ + M G +P + +I K +K
Sbjct: 163 TKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKM 222
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
D+A ++F M VK + G+ T+ +ID CK G++ A + ++M + + D +T ++
Sbjct: 223 DDANELFDEMLVKGLVPNGV-TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 281
Query: 289 IIYGLLARGRLREAYKVVEEIE----KPD------------------------------- 313
+IYGL +G L++A+ +++E+ KPD
Sbjct: 282 LIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQEN 341
Query: 314 ISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
I L Y LI GL + R+ +A ++ REM+ G +P + TY M++
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDIGTYTMIIN 389
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 93/222 (41%), Gaps = 38/222 (17%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
N +TF ++D K+ +DL E ++M + L D
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPD------------------------ 275
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVG 191
L N ++ LC++ + +A LI ++S + +KP++ Y LI G C G
Sbjct: 276 ----------LITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEG 325
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLST 250
DL A + M E +I + + +A K+ +M+ V D+G T
Sbjct: 326 DLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDIG--T 383
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
Y ++I+ CK+G + + +L+EM + G +T + ++ G
Sbjct: 384 YTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 425
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 136/290 (46%), Gaps = 7/290 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHI 133
+T+N +V+ I K +D + L +M N T I L ++
Sbjct: 275 VTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLAD 334
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M G S+ N ++ LC++ L+ A ++ K+ + +PN ++Y L+ G+C
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKK 394
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ A + M G P I + M+ K K ++A+++ + K + L TY
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPV-LITYN 453
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
VID + K GK +A +L+EM + ++ D +T SS++ GL G++ EA K E E
Sbjct: 454 TVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERM 513
Query: 311 --KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+P+ ++ ++ GL + R+ A MI RGC+P +Y +L++G
Sbjct: 514 GIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEG 563
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 117/263 (44%), Gaps = 20/263 (7%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+ I LI+G+C +G +A+KI ++ G P + + MI + K + + A+ V
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV 194
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
M V + TY ++ +C GK+ QA +L+ M +R D +T + +I
Sbjct: 195 LDRMSVSP----DVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATC 250
Query: 295 ARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
+ A K+++E+ PD+ Y+ L+ G+ + R EA + +M GC+P +
Sbjct: 251 RDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVI 310
Query: 351 TYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERV 398
T+ ++L+ L RKG P V I + L + G A +E++
Sbjct: 311 THNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKM 370
Query: 399 MNRGVEVPRFDYNKFLHYYSNEE 421
G + YN LH + E+
Sbjct: 371 PQHGCQPNSLSYNPLLHGFCKEK 393
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 127/269 (47%), Gaps = 20/269 (7%)
Query: 162 AKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIET 221
AK L + P+ I Y +I GYC G++ A + + M+ P + + ++ +
Sbjct: 157 AKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRS 213
Query: 222 FFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEA 281
K +AM+V M ++R + TY I+I+ C+ + A +L+EM RG
Sbjct: 214 LCDSGKLKQAMEVLDRM-LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTP 272
Query: 282 DNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVF 337
D +T + ++ G+ GRL EA K + ++ +P++ ++ +++ + R +A ++
Sbjct: 273 DVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLL 332
Query: 338 REMIKRGCEPTMHTYIMLL-----QGHLG-------KRGRKGPDPLVNFDTIFVGGLVKA 385
+M+++G P++ T+ +L+ +G LG K + G P + G K
Sbjct: 333 ADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKE 392
Query: 386 GKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
K A +Y+ER+++RG YN L
Sbjct: 393 KKMDRAIEYLERMVSRGCYPDIVTYNTML 421
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 113/245 (46%), Gaps = 24/245 (9%)
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR-VKRMDDLGL 248
G+L E K M G P I +I F ++ K +A K+ +++ + D +
Sbjct: 115 TGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPD--V 172
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY ++I CK G+I+ A ++L+ M + D +T ++I+ L G+L++A +V++
Sbjct: 173 ITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDR 229
Query: 309 IEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
+ + PD+ Y LI+ R A ++ EM RGC P + TY +L+ G + K G
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNG-ICKEG 288
Query: 365 R-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
R G P V I + + G+ +DA K + ++ +G +N
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348
Query: 412 KFLHY 416
+++
Sbjct: 349 ILINF 353
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 112/249 (44%), Gaps = 17/249 (6%)
Query: 70 FAHNSITFNRMVDIIGK----SRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELK 125
F+ + +TFN +++ + + R ID+ E + + G + N ++ L + +++
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDIL-EKMPQHGCQP--NSLSYNPLLHGFCKEKKMD 396
Query: 126 KMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLI 184
+ + + M GC + N ++ LC+ V +A ++ +LS + P I Y +I
Sbjct: 397 RAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVI 456
Query: 185 KGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD 244
G G +A K+ + M + +P ++ + K DEA+K F +
Sbjct: 457 DGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFH-----EFE 511
Query: 245 DLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
+G+ T+ ++ +CK + +A L M RG + + + + +I GL G +
Sbjct: 512 RMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAK 571
Query: 301 EAYKVVEEI 309
EA +++ E+
Sbjct: 572 EALELLNEL 580
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 64/136 (47%), Gaps = 2/136 (1%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
IT+N ++D + K+ + L EM + L D T+ + L+ ++ + + FFH
Sbjct: 450 ITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHE 509
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDVGD 192
G + N ++ LC+ + A +L+ ++ KPNE +Y LI+G G
Sbjct: 510 FERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGM 569
Query: 193 LIEASKIWNLMTDEGF 208
EA ++ N + ++G
Sbjct: 570 AKEALELLNELCNKGL 585
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 67/156 (42%), Gaps = 17/156 (10%)
Query: 297 GRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
G L E +K +E + PDI LI+G RL + R+A ++ + G P + TY
Sbjct: 116 GELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITY 175
Query: 353 IMLLQGHLGK-----------RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNR 401
+++ G+ R PD +V ++TI L +GK A + ++R++ R
Sbjct: 176 NVMISGYCKAGEINNALSVLDRMSVSPD-VVTYNTILR-SLCDSGKLKQAMEVLDRMLQR 233
Query: 402 GVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVG 437
Y + + GV ++ ++R+ G
Sbjct: 234 DCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRG 269
>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 933
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 173/388 (44%), Gaps = 25/388 (6%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKT-FKIALMTLAEVRELKKMVNFF 131
+ + + ++D + K+ ++ ++ QE+ R ++ D + + + L + + K+ +F
Sbjct: 518 DHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFL 577
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI--LKLSEWIKPNEIAYGWLIKGYCD 189
M + G + N ++ + C++ +A L+ +K+S IKPN I Y L+ G
Sbjct: 578 TEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSS-IKPNLITYNTLVAGLFG 636
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ-MMRVKRMDDLGL 248
G + +A + N M GF PS ++++ + + D + + + MM D+
Sbjct: 637 TGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADI-- 694
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY----K 304
+ Y ++ +C G +A +LEEM GI D +T +++I G L A+ +
Sbjct: 695 TVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQ 754
Query: 305 VVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
++ + P+I+ ++ L+ GL + R EA V EM K G EP TY +L GH GK+
Sbjct: 755 MLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGH-GKQS 813
Query: 365 R-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
KG P V+ + KAG A + + + RGV Y+
Sbjct: 814 NKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYD 873
Query: 412 KFLHYYSNEEGVVMFEEVGKKLREVGLA 439
+ +S ++ K ++E G +
Sbjct: 874 ILVSGWSRIRNGTEVKKCLKDMKEKGFS 901
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 111/232 (47%), Gaps = 6/232 (2%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEAS 197
G + +N ++ LC+ V A L + + I + LI GYC VGD A
Sbjct: 130 GVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHALDVIGWNTLIAGYCRVGDTPAAL 189
Query: 198 KIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDW 257
+ + MT +G + + ++ F + + D A V MM+ +D ++TY I +
Sbjct: 190 SVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDP-NVATYTPFIVY 248
Query: 258 MCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PD 313
C+ + +A+ + E M + G+ D +TLS+++ GL GR EAY + E++K P+
Sbjct: 249 YCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPN 308
Query: 314 ISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
Y LI L + R +E + EM+ RG + TY L+ LGK+G+
Sbjct: 309 HVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMD-WLGKQGK 359
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 144/312 (46%), Gaps = 29/312 (9%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALM----TLAEVRELKK 126
A N +T+ ++D + K+ L EM R +V D ALM + E+K
Sbjct: 306 APNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKD 365
Query: 127 MVNFF--HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWL 183
+ F ++ G Y++ ++ LC+ V EA+ ++L++ E I PN + + +
Sbjct: 366 TLRFALSDNLSPNGVTYTV-----LIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSV 420
Query: 184 IKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM 243
I G+ G L +A++ +M + G P++ +I+ FFK D A++V+ M +
Sbjct: 421 INGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCE-- 478
Query: 244 DDLGLSTYRIVIDWMC----KRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
G+ + ++D + + GKI +A + ++ G+ D++ +++I GL G +
Sbjct: 479 ---GVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDM 535
Query: 300 REAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
A+K +E+ PD +Y+ I L L + +EA EM G +P TY +
Sbjct: 536 PTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTM 595
Query: 356 LQGHLGKRGRKG 367
+ H RKG
Sbjct: 596 IVSHC----RKG 603
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 127/301 (42%), Gaps = 48/301 (15%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
+ N +T+ ++D + K+ N+D + L EM +K+ ++T + V
Sbjct: 375 LSPNGVTYTVLIDALCKAHNVDEAEQVLLEM------EEKSISPNVVTFSSV-------- 420
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYC 188
+N VK R L+ +A +Y + I PN + YG LI G+
Sbjct: 421 ----------------INGFVK----RGLLDKATEYKRMMKERGINPNVVTYGTLIDGFF 460
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
A ++++ M EG + + +VD ++ + K +EAM +F K GL
Sbjct: 461 KFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALF-----KDASGSGL 515
Query: 249 S----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK 304
S Y +ID + K G + A+ +E+ R + D + + I L G+ +EA
Sbjct: 516 SLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKS 575
Query: 305 VVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL 360
+ E+ KPD S Y+ +I R +A ++ EM +P + TY L+ G
Sbjct: 576 FLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLF 635
Query: 361 G 361
G
Sbjct: 636 G 636
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 122/288 (42%), Gaps = 20/288 (6%)
Query: 146 LNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
L+ +V LC+ EA L ++ + PN + Y LI G E + M
Sbjct: 277 LSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMV 336
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
G + +++ K K DE + + G+ TY ++ID +CK +
Sbjct: 337 SRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGV-TYTVLIDALCKAHNV 395
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA--YK--VVEEIEKPDISLYHGL 320
+A +L EM ++ I + +T SS+I G + RG L +A YK + E P++ Y L
Sbjct: 396 DEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTL 455
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG---------RKGPDPL 371
I G + + A +V+ +M+ G + L+ G L + G +
Sbjct: 456 IDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNG-LRQNGKIEEAMALFKDASGSG 514
Query: 372 VNFD----TIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
++ D T + GL KAG A K+ + +M+R + YN F++
Sbjct: 515 LSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFIN 562
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 141/334 (42%), Gaps = 39/334 (11%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N +V C+ V A+ ++ + E + PN Y I YC + EA ++ M
Sbjct: 208 NTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVR 267
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKR 261
G + + ++ + + EA +F + MD +G + TY +ID + K
Sbjct: 268 NGVLLDVVTLSALVAGLCRDGRFSEAYALF-----REMDKVGAAPNHVTYCTLIDSLAKA 322
Query: 262 GKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK----VVEEIEKPDISLY 317
G+ + ++L EM RG+ D +T ++++ L +G+ E + + P+ Y
Sbjct: 323 GRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTY 382
Query: 318 HGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG------------- 364
LI L + EA QV EM ++ P + T+ ++ G + KRG
Sbjct: 383 TVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFV-KRGLLDKATEYKRMMK 441
Query: 365 RKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYV-ERVMNRGVEVPRFDYNKFLHYYSN--- 419
+G +P +V + T+ G G+ DAA V ++ GV+V +F + ++
Sbjct: 442 ERGINPNVVTYGTLIDGFFKFQGQ--DAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGK 499
Query: 420 -EEGVVMFEEV---GKKLREVGLADLADIFQRYG 449
EE + +F++ G L V L D + G
Sbjct: 500 IEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAG 533
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 28/163 (17%)
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE---IEKPDISLYHGLI 321
+ A +L EM KRG+ D +T+++++ GL G++ A + + I D+ ++ LI
Sbjct: 117 AHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHALDVIGWNTLI 176
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGG 381
G R+ A V M +G P +V ++T+ V G
Sbjct: 177 AGYCRVGDTPAALSVADRMTAQGL----------------------PMDVVGYNTL-VAG 213
Query: 382 LVKAGKSLDAAKYVERVMNR-GVEVPRFDYNKFLHYYSNEEGV 423
+AG+ +DAA+ V +M GV+ Y F+ YY +GV
Sbjct: 214 FCRAGQ-VDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGV 255
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 54/279 (19%), Positives = 117/279 (41%), Gaps = 12/279 (4%)
Query: 36 NLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSIT-FNRMVDII---GKSRNID 91
+LTH LQ C+ R + + + H IT +N ++ ++ G +R
Sbjct: 659 SLTHRRVLQACSQ----SRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKAT 714
Query: 92 LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVK 151
+ E + +G + TF ++ + L + M ++ N ++
Sbjct: 715 VVLEEM--LGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLG 772
Query: 152 TLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEP 210
L + EA +++++ + ++PN + Y L G+ + +EA +++ M +GF P
Sbjct: 773 GLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVP 832
Query: 211 SIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTM 270
+ + +I F K +A ++F+ M+ KR TY I++ + ++
Sbjct: 833 KVSTYNALISDFTKAGMMTQAKELFKDMQ-KRGVHPTSCTYDILVSGWSRIRNGTEVKKC 891
Query: 271 LEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
L++M ++G TLS I G +A ++++ +
Sbjct: 892 LKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNL 930
>gi|410109921|gb|AFV61040.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
filifolia]
Length = 431
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 136/287 (47%), Gaps = 39/287 (13%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T + L L +++ K + F+ + +CG SL N ++ C+ + A+ + +
Sbjct: 109 TCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAI 168
Query: 170 SEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++W ++P+ ++Y L+ GY +GDL E ++ + M G +P + +I K NK
Sbjct: 169 TKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKM 228
Query: 229 DEAMKVFQMMRVKRMDDLGLS----------------------------------TYRIV 254
D+A K+F M VK + G++ TY +
Sbjct: 229 DDANKLFDEMLVKALVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTL 288
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY----KVVEEIE 310
I +CK+G + QA +++EM +G++ D +T +++I G G L A+ ++++E
Sbjct: 289 IYGLCKKGDLKQANDLIDEMSMKGLQPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENI 348
Query: 311 KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
+ D Y LI GL + R+ +A ++ REM+ G +P TY M++
Sbjct: 349 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIIN 395
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 93/227 (40%), Gaps = 43/227 (18%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
N +TF ++D K+ +DL E ++M + L+ D
Sbjct: 246 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPD------------------------ 281
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVG 191
L N ++ LC++ + +A LI ++S + ++P++I Y LI G C G
Sbjct: 282 ----------LITYNTLIYGLCKKGDLKQANDLIDEMSMKGLQPDKITYTTLIDGCCKEG 331
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLST 250
DL A + M E +I + + +A K+ +M+ V D T
Sbjct: 332 DLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDA--RT 389
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
Y ++I+ CK+G + + +L+EM + D S + Y +L G
Sbjct: 390 YTMIINEFCKKGDVWKGSKLLKEM-----QRDGHVPSVVTYNVLMNG 431
>gi|359491363|ref|XP_002265397.2| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
mitochondrial-like [Vitis vinifera]
Length = 516
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 151/350 (43%), Gaps = 19/350 (5%)
Query: 30 LSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRN 89
LS + + LQ N P + R V F+++ + P F H+ T + VD G+ ++
Sbjct: 98 LSFSHITPSPPLILQTLNTSPDAGRTVLGFYKWLS-SNPKFVHSDETISFFVDYFGRRKD 156
Query: 90 IDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMN-DCGCEYSLEMLNK 148
E L M R KT + A+ L ++V+FF M D G E L
Sbjct: 157 FKAIHEVL--MDGRNFAGAKTLESAIDRLVRAGRATQVVSFFDRMEVDYGFRRDRESLTM 214
Query: 149 VVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGF 208
VV LC+ A+ ++ ++ I PNE LIKG+C G L EA ++ M GF
Sbjct: 215 VVSKLCEHGFASHAEKVVKNVANEIFPNETICDLLIKGWCVDGKLDEARRLAEEMFRGGF 274
Query: 209 EPSIDVVDKMIETFFKINK-------DDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKR 261
E + +++ K+ + + EA K+ M V + + T+ ++I +CK
Sbjct: 275 EIGTMAYNSILDCICKLCRKKDPFRLESEAEKILVDMDVAGVPR-NVETFNVLITNLCKI 333
Query: 262 GKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP------DIS 315
K A + M + G + T + L R+ E ++++ ++ D
Sbjct: 334 RKTEDAMKLFYRMGEWGCYPNETTFLVLTRSLYQAARVGEGDEMIDRMKSAGFGNALDKK 393
Query: 316 LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
Y+ IK L + R A +F +M + GC+P + TY +L+ G L GR
Sbjct: 394 AYYEFIKILCGIERIDHAMSLFSKMKEDGCKPGIKTYDLLM-GKLCAHGR 442
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 70/153 (45%), Gaps = 4/153 (2%)
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGD 192
M+ G ++E N ++ LC+ + +A L ++ EW PNE + L +
Sbjct: 311 MDVAGVPRNVETFNVLITNLCKIRKTEDAMKLFYRMGEWGCYPNETTFLVLTRSLYQAAR 370
Query: 193 LIEASKIWNLMTDEGFEPSID--VVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
+ E ++ + M GF ++D + I+ I + D AM +F M+ G+ T
Sbjct: 371 VGEGDEMIDRMKSAGFGNALDKKAYYEFIKILCGIERIDHAMSLFSKMKEDGCKP-GIKT 429
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADN 283
Y +++ +C G++ +A + E RG+ ++
Sbjct: 430 YDLLMGKLCAHGRLDKANALFSEAVNRGVPVES 462
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 132/290 (45%), Gaps = 25/290 (8%)
Query: 146 LNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
N V+ LCQ+ ++E+ L+ K L + N+ I+G C+ G L EA + M
Sbjct: 118 FNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM- 176
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM--DDLGLSTYRIVIDWMCKRG 262
D P + + ++ K +K EA + + M + DD TY +ID CKR
Sbjct: 177 DAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDF---TYNTIIDGYCKRD 233
Query: 263 KISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYH 318
+ +A +L++ +G D +T S+I GL A G + A ++ E + KPD+ +Y+
Sbjct: 234 MLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYN 293
Query: 319 GLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIF 378
L+KGL R A QV EM++ GC P + TY +++ G L K G +V D I
Sbjct: 294 SLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVING-LCKMGNISDAAVVMNDAIV 352
Query: 379 VG-------------GLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
G G K K A + VER+ G+ YN L+
Sbjct: 353 KGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLN 402
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 116/248 (46%), Gaps = 8/248 (3%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEA 196
GC + N ++ L +A K + LS + P+ + IK +C G A
Sbjct: 5 GCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVA 64
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLSTYRIVI 255
++ + + G + ++ + +A +F +M+R D+ +T+ V+
Sbjct: 65 LRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDV--ATFNNVL 122
Query: 256 DWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE---KP 312
+C++G I ++ +L ++ KRG+ + T + I GL GRL EA +VE ++ P
Sbjct: 123 HALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAYIAP 182
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLV 372
D+ Y+ L++GL + + +EA Q R M+ +GC P TY ++ G+ + + L+
Sbjct: 183 DVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELL 242
Query: 373 NFDTIFVG 380
D IF G
Sbjct: 243 K-DAIFKG 249
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 96/191 (50%), Gaps = 7/191 (3%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
+KP+ + Y L+KG C G ++ A ++ N M ++G P I + +I K+ +A
Sbjct: 285 LKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAA 344
Query: 233 KVFQMMRVKR-MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
V VK + D+ T+ +ID CKR K+ A ++E M+ GI D +T +S++
Sbjct: 345 VVMNDAIVKGYLPDV--FTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLN 402
Query: 292 GLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
GL G+ +E + EE+ +P+ Y+ LI+ ++ + EA+ V M + G P
Sbjct: 403 GLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVP 462
Query: 348 TMHTYIMLLQG 358
++ L+ G
Sbjct: 463 DTISFNTLIHG 473
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 149/334 (44%), Gaps = 29/334 (8%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIM 134
TFN M+D K +D + ++ M + D T+ L L + + K++ F M
Sbjct: 361 TFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEM 420
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDL 193
GC + N +++ C+ + EA +I+++S+ + P+ I++ LI G+C GDL
Sbjct: 421 ILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDL 480
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
A ++ + ++G+ + D + +I + A K+F M + + L TYR+
Sbjct: 481 DGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEM-ISKGYKPDLYTYRV 539
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPD 313
++D CK + +AY L EM +G T ++ L R+ EA ++ + +
Sbjct: 540 LVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVR-- 597
Query: 314 ISLYHGLIKGLLRLRRAREATQ--VFREMIKRGCEPTMHTYIMLLQG----HLGKRGRK- 366
+ + ++ +L + A + E++K+G + TY +L +G L ++ RK
Sbjct: 598 MGVVPEVVDTILSTDKKEIAAPKILVEELMKKG-HISYPTYEVLHEGVRDNKLTRKARKW 656
Query: 367 ---GPDP-------------LVNFDTIFVGGLVK 384
PD L+ D I + GL+K
Sbjct: 657 RLSDPDCMNTTTHGISYSLLLLQIDHILISGLIK 690
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 114/251 (45%), Gaps = 33/251 (13%)
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRG 262
G P+ + +++ D+A KV+ RM G++ T+ + I C G
Sbjct: 5 GCPPAAPAYNAIMDALVNTAYHDQAHKVYV-----RMLSAGVAPDARTHTVRIKSFCITG 59
Query: 263 KISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYH 318
+ A +L + +RG + L +++ GL A G +A + +E+ + PD++ ++
Sbjct: 60 RPHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFN 119
Query: 319 GLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK------------ 366
++ L + E+ + +++KRG T + ++G L + GR
Sbjct: 120 NVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRG-LCEGGRLEEAVALVESMDA 178
Query: 367 --GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVV 424
PD +V ++T+ + GL K K +AA+Y+ R+MN+G F YN + Y +
Sbjct: 179 YIAPD-VVTYNTL-MRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRD--- 233
Query: 425 MFEEVGKKLRE 435
M +E + L++
Sbjct: 234 MLQEATELLKD 244
>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
Length = 628
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 131/288 (45%), Gaps = 22/288 (7%)
Query: 142 SLEMLNKVVKTLCQRKLVVEAKYLILKLSE----WIKPNEIAYGWLIKGYCDVGDLIEAS 197
S E+ N ++ +C+ K + + L ++ + PN Y ++ C L EA
Sbjct: 300 SAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQ 359
Query: 198 KIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDW 257
++ N M + G P + +++ K+ K D A + + M + + + I ++
Sbjct: 360 ELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASI-LNA 418
Query: 258 MCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA----YKVVEEIEKPD 313
+ K GK+ A + LE M RG D +T ++++ GL GR+ EA K+V PD
Sbjct: 419 LSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPD 478
Query: 314 ISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG-----------HLGK 362
+ Y +I L R +A A +F+EM+KRG P Y LL G L K
Sbjct: 479 VFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLK 538
Query: 363 RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY 410
PD +++ + + GL KAGK+ DA + VER+ + G F Y
Sbjct: 539 TSLCKPDFVMH--KMVLDGLCKAGKAEDACEVVERMADAGFPADAFTY 584
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 96/421 (22%), Positives = 167/421 (39%), Gaps = 73/421 (17%)
Query: 67 QPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELK 125
Q + H+ T+N +D + K+ L +E Q+M RR +D T+ I L L + EL
Sbjct: 31 QKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELD 90
Query: 126 K----------------MVNFFHIMNDC--------------------GCEYSLEMLNKV 149
K ++ + +++ C GC + N +
Sbjct: 91 KAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSL 150
Query: 150 VKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGF 208
+K LC + + EA L +++ +PN I+Y L+ G C G L EA ++W M ++
Sbjct: 151 LKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSC 210
Query: 209 EPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK--RMDDLGLSTY--------------R 252
P + + K N+ EA + M K + D + ST
Sbjct: 211 VPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQN 270
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK- 311
+I+ +C+ G + +A EEM R +++I+ + RL + + + ++
Sbjct: 271 QMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSM 330
Query: 312 ------PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG--HLGKR 363
P++ Y+ ++ L + ++ EA ++ EM G P + TY L+ G LGK
Sbjct: 331 KEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKL 390
Query: 364 GR----------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
R +G P D + L KAGK A ++E + RG YN
Sbjct: 391 DRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTL 450
Query: 414 L 414
L
Sbjct: 451 L 451
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 140/335 (41%), Gaps = 44/335 (13%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALMTLAEVRELKKMVN 129
H N+M++ + +S +D +T +EM R + + F + + + + L V
Sbjct: 263 GHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVL 322
Query: 130 FFH---IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIK 185
F M + C +LE N +V LC+ K + EA+ L+ +++ + + P+ + Y L+
Sbjct: 323 LFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVD 382
Query: 186 GYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD 245
G C +G L A + M+ EG P ++ K K D A+ + M+ R
Sbjct: 383 GLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKA-RGST 441
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
L TY ++D +CK G+I +A T L +M D + + II L G+ A+ +
Sbjct: 442 PDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAI 501
Query: 306 VEEIEK----PDISLYHGLIKGLLR--------------------------------LRR 329
+E+ K PD LYH L+ GL R +
Sbjct: 502 FQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCKPDFVMHKMVLDGLCKAGK 561
Query: 330 AREATQVFREMIKRGCEPTMHTYIMLLQG--HLGK 362
A +A +V M G TYI ++ G LGK
Sbjct: 562 AEDACEVVERMADAGFPADAFTYISVVSGLRKLGK 596
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 161/383 (42%), Gaps = 48/383 (12%)
Query: 56 VYLFFQYTQKA--QPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKI 113
++ F+Y KA +P N I+++ ++D + K+ +D +EM + V D
Sbjct: 163 AFVLFEYMAKAGCEP----NVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYT 218
Query: 114 ALMT-LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW 172
+ +T L + + + + M G + + V+ LC++ EA+
Sbjct: 219 SFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQ--------- 269
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
+I+ C G L EA K + M PS ++ + +I K + + +
Sbjct: 270 --------NQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGV 321
Query: 233 KVFQMMRVKRMDDL----GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
+FQ R+K M + L TY I++D +CK ++ +A ++ EM G+ D +T S+
Sbjct: 322 LLFQ--RMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSA 379
Query: 289 IIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
++ GL G+L A ++EE+ K PD ++ L + + A M RG
Sbjct: 380 LVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARG 439
Query: 345 CEPTMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDA 391
P + TY LL G L K GR P V TI + L ++G++ A
Sbjct: 440 STPDLVTYNTLLDG-LCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGA 498
Query: 392 AKYVERVMNRGVEVPRFDYNKFL 414
+ ++ RGV Y+ L
Sbjct: 499 HAIFQEMVKRGVLPDTVLYHSLL 521
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 132/269 (49%), Gaps = 15/269 (5%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P++ Y +++G C G+L +A ++ + + G + ++ +I+ K ++ D+A+++
Sbjct: 71 PDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEI 130
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
F+ M + T+ ++ +C ++S+A+ + E M K G E + ++ S+++ GL
Sbjct: 131 FKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLC 190
Query: 295 ARGRLREAYKVVEE-IEK---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
GRL EA ++ EE +EK PD+ Y + GL + R EA R+M+ +G +
Sbjct: 191 KAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAV 250
Query: 351 TYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY 410
+ ++ G L K+G + L ++G +A K E +++R +
Sbjct: 251 AFSTVI-GILCKKGHAE-----EAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELF 304
Query: 411 NKFLHYYSNE----EGVVMFEEVGKKLRE 435
N +H +GV++F+ + K ++E
Sbjct: 305 NTLIHAVCKSKRLPDGVLLFQRM-KSMKE 332
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 109/244 (44%), Gaps = 6/244 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+T++ +VD + K +D + L+EM + + D T L L++ ++ ++
Sbjct: 375 VTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLET 434
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGD 192
M G L N ++ LC+ + EA + K+ + P+ +Y +I C G
Sbjct: 435 MKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQ 494
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
A I+ M G P + +++ + +D A+++ + K ++
Sbjct: 495 AAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCKP----DFVMHK 550
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP 312
+V+D +CK GK A ++E M G AD T S++ GL G++ +A ++V++ +
Sbjct: 551 MVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVDKARQLVDDASET 610
Query: 313 DISL 316
S+
Sbjct: 611 HTSV 614
>gi|297835856|ref|XP_002885810.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331650|gb|EFH62069.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 536
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 147/313 (46%), Gaps = 15/313 (4%)
Query: 58 LFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALM 116
L Q + C NS+ N +V + + LF E L R + ND KTF I +
Sbjct: 160 LLLQSYEVEGCCMVVNSL-LNTLVKLDRVEDAMKLFEEHL----RFQSCNDTKTFNILIR 214
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI--LKLSEWIK 174
L V + +K V M+ GC + N ++K C+ + +A + +K S
Sbjct: 215 GLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSSGCS 274
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+ + Y +I GYC G + EAS + + M G P+ + +++ + K + A ++
Sbjct: 275 PDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEI 334
Query: 235 -FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
+M+ D+ T+ +ID C+ G+++Q + + EEM RG+ + T S +I L
Sbjct: 335 RGKMISFGCFPDV--VTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILINAL 392
Query: 294 LARGRLREAYKVVEEIEKPDIS----LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
RL +A +++ ++ DI +Y+ +I G + + EA + EM K+ C+P
Sbjct: 393 CKENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKKCKPDK 452
Query: 350 HTYIMLLQGHLGK 362
T+ +L+ GH K
Sbjct: 453 ITFTILIIGHCMK 465
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 122/271 (45%), Gaps = 17/271 (6%)
Query: 145 MLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEI-AYGWLIKGYCDVGDLIEASKIWNLM 203
++N ++ TL + V +A L + + N+ + LI+G C VG +A ++ M
Sbjct: 173 VVNSLLNTLVKLDRVEDAMKLFEEHLRFQSCNDTKTFNILIRGLCGVGKAEKAVELLGGM 232
Query: 204 TDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGK 263
+ G P I + +I+ F K N+ +A ++F ++ + TY +I CK GK
Sbjct: 233 SGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSSGCSPDVVTYTSMISGYCKAGK 292
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHG 319
+ +A +L++M + GI N+T + ++ G G + A ++ ++ PD+ +
Sbjct: 293 MQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIRGKMISFGCFPDVVTFTS 352
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG------------HLGKRGRKG 367
LI G R+ + + +++ EM RG P TY +L+ LG+ K
Sbjct: 353 LIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILINALCKENRLLKARELLGQLASKD 412
Query: 368 PDPLVNFDTIFVGGLVKAGKSLDAAKYVERV 398
P + G KAGK +A VE +
Sbjct: 413 IIPQPFMYNPVIDGFCKAGKVNEAIVIVEEM 443
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 80/163 (49%), Gaps = 5/163 (3%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+ + + LI GYC VG + + ++W M G P+ +I K N+ +A ++
Sbjct: 345 PDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILINALCKENRLLKAREL 404
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
+ K + Y VID CK GK+++A ++EEM K+ + D +T + +I G
Sbjct: 405 LGQLASKDIIPQPF-MYNPVIDGFCKAGKVNEAIVIVEEMEKKKCKPDKITFTILIIGHC 463
Query: 295 ARGRLREA----YKVVEEIEKPDISLYHGLIKGLLRLRRAREA 333
+GR+ EA +K+V PD L+ LL+ A+EA
Sbjct: 464 MKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 76/179 (42%), Gaps = 3/179 (1%)
Query: 69 CFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKM 127
CF + +TF ++D + ++ + +EM R + N T+ I + L + L K
Sbjct: 343 CFP-DVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILINALCKENRLLKA 401
Query: 128 VNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKG 186
+ M N V+ C+ V EA ++ ++ + KP++I + LI G
Sbjct: 402 RELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKKCKPDKITFTILIIG 461
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD 245
+C G + EA I++ M G P V ++ K EA + Q+ +++D
Sbjct: 462 HCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIAHKGQIND 520
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 144/294 (48%), Gaps = 10/294 (3%)
Query: 90 IDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKV 149
+ LF ++E + + T+ I + + L+ F ++ G + ++N++
Sbjct: 76 VSLFNRMIRECTIKVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQL 135
Query: 150 VKTLCQRKLVVEA-KYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDE- 206
+K LC K + EA LI ++ E P+ ++Y L+KG+C+ EA ++ ++M D
Sbjct: 136 LKGLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQ 195
Query: 207 --GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
P++ +I FF + D+A +F M + R + TY VID +CK +
Sbjct: 196 GRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEM-MDRGIQPNVVTYTTVIDGLCKAQVV 254
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGL 320
+A + ++M +G++ DN T + +I+G L+ G+ +E +++EE+ KPD Y L
Sbjct: 255 DRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSL 314
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNF 374
+ L R REA F MI++G +P + Y +L+ G+ K L+N
Sbjct: 315 LNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNL 368
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 161/367 (43%), Gaps = 35/367 (9%)
Query: 58 LFFQYTQKA-QPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIAL 115
LF + + QP N +T+ ++D + K++ +D Q+M + + D T+ +
Sbjct: 225 LFLEMMDRGIQP----NVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLI 280
Query: 116 MTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIK 174
+ + K++V M+ G + ++ LC EA++ + + IK
Sbjct: 281 HGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIK 340
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
PN YG LI GY G L E + NLM + G P + + + + K DEAM +
Sbjct: 341 PNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHI 400
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
F M+ + + + + +ID +CK G++ A +M G+ + +S++YGL
Sbjct: 401 FNKMKQQGLSP-DVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLC 459
Query: 295 ARGRLREA----YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
+ +A ++++ + +PD+ ++ ++ L + +A ++ M + G P +
Sbjct: 460 TVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVI 519
Query: 351 TYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY 410
+Y L+ GH VG + +A KSLD +++ G++ + Y
Sbjct: 520 SYTTLIGGH-----------------CLVGRIDEAAKSLDV------MLSVGLKPDEWTY 556
Query: 411 NKFLHYY 417
N LH Y
Sbjct: 557 NTLLHGY 563
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/377 (21%), Positives = 163/377 (43%), Gaps = 53/377 (14%)
Query: 85 GKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLE 144
G+ R F++++ G + N + I + A L +M + ++M + G
Sbjct: 322 GRCREARFFFDSMIRKGIKP--NVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHH 379
Query: 145 MLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLM 203
+ N + ++ ++ EA ++ K+ + + P+ + +G LI C +G + +A +N M
Sbjct: 380 IFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQM 439
Query: 204 TDEGFEPSIDVVDKMIETFFKINKDDEAMKVF--------------------------QM 237
+EG P+I V + ++ ++K ++A + + Q+
Sbjct: 440 MNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQV 499
Query: 238 MRVKRMDDL--------GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSI 289
M+ +R+ DL + +Y +I C G+I +A L+ M G++ D T +++
Sbjct: 500 MKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTL 559
Query: 290 IYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGC 345
++G GR+ +AY V E+ + P + Y ++ GL RR EA +++ MI G
Sbjct: 560 LHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGK 619
Query: 346 EPTMHTYIMLLQG----HLGKRGRKGPDPLVNFD--------TIFVGGLVKAGKSLDAAK 393
+ + Y ++L G + K L + D I +G L K+G++ DA
Sbjct: 620 QWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMH 679
Query: 394 YVERVMNRGVEVPRFDY 410
+ + G+ F Y
Sbjct: 680 LFATISSYGLVPDVFTY 696
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 147/320 (45%), Gaps = 23/320 (7%)
Query: 77 FNRMVDIIGKSRNIDLFWETLQEMGRRRL----VNDKTFKIALMTLAEVRELKKMVNFFH 132
FN + K ID +M ++ L VN AL L V + ++ F
Sbjct: 381 FNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDD--AVLKFNQ 438
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVG 191
+MN+ G ++ + N +V LC +AK + L++ I+P+ + + ++ C G
Sbjct: 439 MMNE-GVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKG 497
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS-- 249
+++A ++ +LM G P + +I + + DEA K +M +GL
Sbjct: 498 QVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVML-----SVGLKPD 552
Query: 250 --TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA----Y 303
TY ++ C+ G+I AY + EM + GI +T S+I++GL R EA
Sbjct: 553 EWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYL 612
Query: 304 KVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
++ ++ +I +Y+ ++ GL + EA ++F+ + + + + T+ +++ G L K
Sbjct: 613 NMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMI-GALFKS 671
Query: 364 GRKGPDPLVNFDTIFVGGLV 383
GR D + F TI GLV
Sbjct: 672 GRN-EDAMHLFATISSYGLV 690
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 24/206 (11%)
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV- 306
L TY I+I C+ G++ + + K G +N+ ++ ++ GL RLREA ++
Sbjct: 94 LCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMDILI 153
Query: 307 ----EEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIK---RGCEPTMHTYIMLLQGH 359
E PD+ Y+ L+KG +RA EA ++ M R C P + +Y ++ G
Sbjct: 154 KRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGF 213
Query: 360 L--GKRGR----------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPR 407
G+ + +G P V T + GL KA A ++++++GV+
Sbjct: 214 FTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDN 273
Query: 408 FDYNKFLHYYSN----EEGVVMFEEV 429
YN +H Y + +E V M EE+
Sbjct: 274 DTYNCLIHGYLSIGKWKEVVRMLEEM 299
>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 927
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 143/323 (44%), Gaps = 21/323 (6%)
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M CG + ++ + +VK C++ +V A K++E PN + Y LI+ C G+
Sbjct: 340 MVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGN 399
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ +A ++ M ++ P++ +V+ +I F K+ +EA K+F D + TY
Sbjct: 400 MAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFD--EAVACDIANIFTYN 457
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI--- 309
++ W+CK GK+S+A T+ ++M +G+ ++ +S+I G +G L A V ++
Sbjct: 458 SLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDC 517
Query: 310 -EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR--- 365
KP++ Y L+ G + A VF M+ P+ TY + + G L K GR
Sbjct: 518 GLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKING-LCKVGRTSE 576
Query: 366 ----------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
KG P+ + G +K G A + GV Y ++
Sbjct: 577 AQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLIN 636
Query: 416 YYSNEEGVVMFEEVGKKLREVGL 438
+ + ++ ++R GL
Sbjct: 637 GFCKNNNTDLALKMRNEMRNKGL 659
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 117/231 (50%), Gaps = 14/231 (6%)
Query: 179 AYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
AYG LI G+C D+ AS +++ + D G P+ + + +I + +N + A+ +
Sbjct: 665 AYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNL---- 720
Query: 239 RVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
KRM G+S TY +ID + K G++ A + EM +GI D + + +I GL
Sbjct: 721 -QKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLC 779
Query: 295 ARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
+G+L A K++ E+E+ P++ +Y+ LI G + +EA ++ EM+ +G P
Sbjct: 780 GKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDT 839
Query: 351 TYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNR 401
TY +L+ G + K G L++ G+ + + K +E+ +N+
Sbjct: 840 TYDILINGKI-KGGNSALKSLLSLKFKDGKGMKRINEQDSIKKVIEKAVNK 889
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 109/260 (41%), Gaps = 6/260 (2%)
Query: 105 LVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLC-QRKLVVEAK 163
+ N T+ L L + ++ + + M D G + N ++ C Q L + A
Sbjct: 450 IANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAAS 509
Query: 164 YLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFF 223
L +KPN I Y L+ GY GD A +++ M DE PS + I
Sbjct: 510 VFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLC 569
Query: 224 KINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADN 283
K+ + EA + + K + L TY ++D K G +S A T EM + G+ +
Sbjct: 570 KVGRTSEAQDMLKKFVEKGFVPVCL-TYNSIMDGFIKEGSVSSALTAYREMCESGVSPNV 628
Query: 284 LTLSSIIYGLLARGRLREAYKVVEEIEKP----DISLYHGLIKGLLRLRRAREATQVFRE 339
+T +++I G A K+ E+ DI+ Y LI G + + A+ +F E
Sbjct: 629 ITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSE 688
Query: 340 MIKRGCEPTMHTYIMLLQGH 359
++ G P Y L+ G+
Sbjct: 689 LLDGGLSPNSVIYNSLISGY 708
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 134/310 (43%), Gaps = 65/310 (20%)
Query: 156 RKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYC---DV---------------------- 190
+K +EAK S +K + AY +I+ +C DV
Sbjct: 264 KKFFLEAK------SRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTF 317
Query: 191 ----------GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
G+++EA ++ + M G + ++ V +++ + K +K A++ F
Sbjct: 318 TSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFD---- 373
Query: 241 KRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR 296
+M++ G S TY ++I+W CK G +++AY + +M + I ++S+I G L
Sbjct: 374 -KMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKV 432
Query: 297 GRLREAYKVVEEIEKPDIS---LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYI 353
EA K+ +E DI+ Y+ L+ L + + EAT ++++M+ +G PT +Y
Sbjct: 433 ESREEASKLFDEAVACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYN 492
Query: 354 MLLQGHLGKRGRK------------GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNR 401
++ GH + G P V +I + G K G + A +R+++
Sbjct: 493 SMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDE 552
Query: 402 GVEVPRFDYN 411
+ F YN
Sbjct: 553 NIVPSDFTYN 562
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 120/285 (42%), Gaps = 24/285 (8%)
Query: 172 WIKPNEIAYGWLIKGYCDVGDLI-EASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDE 230
WIK L+K D+I EA +++ M +G V M+ K N ++E
Sbjct: 208 WIKFLNFLLTALVKN-----DMIYEAREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEE 262
Query: 231 AMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
A K F + R L + Y IVI CK + A +L++M +G T +S+I
Sbjct: 263 AKKFFLEAK-SRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVI 321
Query: 291 YGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
+ +G + EA ++ +E+ + ++ + L+KG + + A + F +M + G
Sbjct: 322 GACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPS 381
Query: 347 PTMHTYIMLLQ-----GHLGKR-------GRKGPDPLVNFDTIFVGGLVKAGKSLDAAKY 394
P TY +L++ G++ K K P V + G +K +A+K
Sbjct: 382 PNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKL 441
Query: 395 VERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLA 439
+ + + F YN L + E + + +K+ + GLA
Sbjct: 442 FDEAVACDI-ANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLA 485
Score = 42.0 bits (97), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 63/142 (44%), Gaps = 3/142 (2%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLIEA 196
G L+ ++ L + +V A L ++S + I P+ I Y LI G C G L A
Sbjct: 728 GISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENA 787
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVID 256
KI M + P++ + + +I FK EA ++ M K + +TY I+I+
Sbjct: 788 QKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTP-NDTTYDILIN 846
Query: 257 WMCKRGKISQAYTMLEEMFKRG 278
K G S ++L FK G
Sbjct: 847 GKIKGGN-SALKSLLSLKFKDG 867
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 171/380 (45%), Gaps = 35/380 (9%)
Query: 70 FAHNSITFNRMVDII---GKSRNIDLFWETLQEMGRR-RLVNDKTFKIALMTLAEVRE-- 123
+ N+ITF+ +++ + G+ + + EMG + L+ T L + E
Sbjct: 154 YEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAM 213
Query: 124 --LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAY 180
+ KMV + GC+ + V+ +C+ A L+ K+ E IK + + Y
Sbjct: 214 LLIDKMVEY-------GCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY 266
Query: 181 GWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
+I G C G L A ++N M +G +I + +I F + D+ K+ + M +
Sbjct: 267 SIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDM-I 325
Query: 241 KRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
KR + + T+ ++ID K GK+ +A + +EM RGI D +T +S+I G L
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385
Query: 301 EAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
+A ++V+ + P+I ++ LI G + R + ++FR+M RG TY L+
Sbjct: 386 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 445
Query: 357 QG--HLGKR-----------GRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
QG LGK RK P +V + I + GL G+S A + E++ +
Sbjct: 446 QGFCELGKLNVAKELFQEMVSRKVPPNIVTY-KILLDGLCDNGESEKALEIFEKIEKSKM 504
Query: 404 EVPRFDYNKFLHYYSNEEGV 423
E+ YN +H N V
Sbjct: 505 ELDIGIYNIIIHGMCNASKV 524
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/393 (23%), Positives = 158/393 (40%), Gaps = 83/393 (21%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIM 134
I F+R+ I K++ DL ++M E++ + + IM
Sbjct: 89 IDFSRLFSAIAKTKQYDLVLALCKQM-------------------ELKGIAHNLYTLSIM 129
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLI 194
+C C + LC L A I+KL +PN I + LI G C G +
Sbjct: 130 INCFCR---------CRKLC---LAFSAMGKIIKLG--YEPNTITFSTLINGLCLEGRVS 175
Query: 195 EASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM---------------------- 232
EA ++ + M + G +P + ++ ++ K+ EAM
Sbjct: 176 EALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVL 235
Query: 233 --------KVFQMMRVKRMDD----LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIE 280
M +++M++ L Y I+ID +CK G + A+ + EM +GI
Sbjct: 236 NVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGIT 295
Query: 281 ADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQV 336
+ +T + +I G GR + K++ ++ K P++ + LI ++ + REA ++
Sbjct: 296 TNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEEL 355
Query: 337 FREMIKRGCEPTMHTYIMLLQG-----HLGKRGR-------KGPDPLVNFDTIFVGGLVK 384
+EMI RG P TY L+ G HL K + KG DP + I + G K
Sbjct: 356 HKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCK 415
Query: 385 AGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
A + D + ++ RGV YN + +
Sbjct: 416 ANRIDDGLELFRKMSLRGVVADTVTYNTLIQGF 448
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 167/386 (43%), Gaps = 21/386 (5%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKT-FKIALMTLAEVRELKKMVNFF 131
N++T+ +++++ KS L E L++M R + D + I + L + L N F
Sbjct: 227 NAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLF 286
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQR-KLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDV 190
+ M G ++ N ++ C + AK L + I PN + + LI +
Sbjct: 287 NEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKE 346
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G L EA ++ M G P +I+ F K N D+A ++ +M V + D + T
Sbjct: 347 GKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM-VSKGCDPNIRT 405
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
+ I+I+ CK +I + +M RG+ AD +T +++I G G+L A ++ +E+
Sbjct: 406 FNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMV 465
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG-- 364
P+I Y L+ GL + +A ++F ++ K E + Y +++ G
Sbjct: 466 SRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVD 525
Query: 365 ----------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPR-FDYNKF 413
KG P V I +GGL K G L A+ + R M P + YN
Sbjct: 526 DAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKG-PLSEAELLFRKMEEDGHAPDGWTYNIL 584
Query: 414 LHYYSNEEGVVMFEEVGKKLREVGLA 439
+ + + ++ ++L+ G +
Sbjct: 585 IRAHLGDGDATKSVKLIEELKRCGFS 610
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 128/274 (46%), Gaps = 3/274 (1%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMV 128
A ++IT+ ++D K ++D + + M + N +TF I + + + +
Sbjct: 364 IAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGL 423
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGY 187
F M+ G N +++ C+ + AK L ++ S + PN + Y L+ G
Sbjct: 424 ELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGL 483
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
CD G+ +A +I+ + E I + + +I +K D+A +F + +K + G
Sbjct: 484 CDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP-G 542
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
+ TY I+I +CK+G +S+A + +M + G D T + +I L G ++ K++E
Sbjct: 543 VKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIE 602
Query: 308 EIEKPDISLYHGLIKGLLRLRRAREATQVFREMI 341
E+++ S+ IK ++ + + F +M+
Sbjct: 603 ELKRCGFSVDASTIKMVIDMLSDGRLKKSFLDML 636
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 125/282 (44%), Gaps = 27/282 (9%)
Query: 210 PSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYT 269
P++ ++ K + D + + + M +K + L T I+I+ C+ K+ A++
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAH-NLYTLSIMINCFCRCRKLCLAFS 144
Query: 270 MLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLL 325
+ ++ K G E + +T S++I GL GR+ EA ++V+ + KPD+ + L+ GL
Sbjct: 145 AMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLC 204
Query: 326 RLRRAREATQVFREMIKRGCEPTMHTY-----IMLLQGHLG---KRGRKGPDPLVNFD-- 375
+ EA + +M++ GC+P TY +M G + RK + + D
Sbjct: 205 LSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAV 264
Query: 376 --TIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN----EEGVVMFEEV 429
+I + GL K G +A + +G+ YN + + N ++G + ++
Sbjct: 265 KYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDM 324
Query: 430 GKK---LREVGLADLADIFQRYGKKMATRERRR---NRAIEP 465
K+ V + L D F + GK E + +R I P
Sbjct: 325 IKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP 366
>gi|297837133|ref|XP_002886448.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
lyrata]
gi|297332289|gb|EFH62707.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
lyrata]
Length = 332
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 127/285 (44%), Gaps = 29/285 (10%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEA 196
GC++ + N ++ LC+ V+EA+ L+ ++ E +PNE+ YG ++ G C +GD A
Sbjct: 5 GCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGDTDSA 64
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVID 256
+ M + + + + +I+ K +A +F M K + + TY +ID
Sbjct: 65 LNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFP-NVLTYNCMID 123
Query: 257 WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----P 312
C GK + A +L +M + ++ D +T +++I + G++ EA ++ E+ P
Sbjct: 124 GCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRNIFP 183
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLV 372
D Y+ LI G + R +A +F M+ +G P + T
Sbjct: 184 DTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITI-------------------- 223
Query: 373 NFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
+GG +A + D K + ++ RG+ YN +H +
Sbjct: 224 ---NTLIGGCCRAKRVDDGIKLLHEMLRRGLVPDSVSYNTLIHGF 265
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 131/282 (46%), Gaps = 15/282 (5%)
Query: 72 HNSITFNRMVDII---GKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMV 128
H+ + FN +++ + G+ + + + E G + N+ T+ + + ++ + +
Sbjct: 8 HDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQP--NEVTYGTIVNGMCKMGDTDSAL 65
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGY 187
N M++ + + + ++ LC+ +A+ L ++ + I PN + Y +I G
Sbjct: 66 NLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNCMIDGC 125
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM--DD 245
C G +A ++ M + +P + + +I F K K EA ++++ M + + D
Sbjct: 126 CSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRNIFPDT 185
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
+ TY +ID CK ++ A + + M +G + +T++++I G R+ + K+
Sbjct: 186 I---TYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGIKL 242
Query: 306 VEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
+ E+ + PD Y+ LI G + A +F+EMI +
Sbjct: 243 LHEMLRRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEMISQ 284
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 160/373 (42%), Gaps = 52/373 (13%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRR-LVNDKTFKIALMTLAEVRELKKMVNFF 131
N T+N ++ + NID+ +M + L N T+ + ++R++
Sbjct: 204 NVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLL 263
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
M G E +L N V+ LC+ + E +++ +++ +E+ Y LIKGYC
Sbjct: 264 RSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKE 323
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK--------- 241
G+ +A + M G PS+ +I + K + AM+ MRV+
Sbjct: 324 GNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTY 383
Query: 242 ---------------------RMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFK 276
M+D G S TY +I+ C GK+ A +LE+M +
Sbjct: 384 TTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKE 443
Query: 277 RGIEADNLTLSSIIYGLLARGRLREAYKV----VEEIEKPDISLYHGLIKGLLRLRRARE 332
+G+ D ++ S+++ G + EA +V VE+ KPD Y LI+G RR +E
Sbjct: 444 KGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKE 503
Query: 333 ATQVFREMIKRGCEPTMHTYIML-----LQGHLGKRGR-------KGPDPLVNFDTIFVG 380
A ++ EM++ G P TY L ++G L K + KG P V ++ +
Sbjct: 504 ACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLIN 563
Query: 381 GLVKAGKSLDAAK 393
GL K ++ +A +
Sbjct: 564 GLNKQSRTREAKR 576
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 146/342 (42%), Gaps = 19/342 (5%)
Query: 91 DLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVV 150
L +++LQE F + + + + + + K ++ H+ G + N V+
Sbjct: 117 SLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVL 176
Query: 151 KTLCQRKLVVEAKYLILK--LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGF 208
+ K + + K L + PN Y LI+G+C G++ A +++ M +G
Sbjct: 177 DATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGC 236
Query: 209 EPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAY 268
P++ + +I+ + K+ K D+ K+ + M +K ++ L +Y +VI+ +C+ G++ +
Sbjct: 237 LPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEP-NLISYNVVINGLCREGRMKEVS 295
Query: 269 TMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGL 324
+L EM +RG D +T +++I G G +A + E+ + P + Y LI +
Sbjct: 296 FVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSM 355
Query: 325 LRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------------LGKRGRKGPDPLV 372
+ A + +M RG P TY L+ G L + G P V
Sbjct: 356 CKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSV 415
Query: 373 NFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
+ G GK DA +E + +G+ Y+ L
Sbjct: 416 VTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 457
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 143/308 (46%), Gaps = 26/308 (8%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHI 133
IT+ ++ + K+ N++ E L +M R L N++T+ + ++ + +
Sbjct: 346 ITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLRE 405
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
MND G S+ N ++ C + +A ++ + E + P+ ++Y ++ G+C D
Sbjct: 406 MNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYD 465
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ-MMRVKRMDDLGLSTY 251
+ EA ++ M ++G +P +I+ F + + EA +++ M+RV D TY
Sbjct: 466 VDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDE--FTY 523
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV----- 306
+I+ C G + +A + EM ++G+ D +T S +I GL + R REA +++
Sbjct: 524 TALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFY 583
Query: 307 EEIEKPDISLYH---------------GLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
EE D++ YH LIKG EA QVF M+ + +P
Sbjct: 584 EESVPSDVT-YHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTA 642
Query: 352 YIMLLQGH 359
Y +++ GH
Sbjct: 643 YNIMIHGH 650
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 129/299 (43%), Gaps = 25/299 (8%)
Query: 70 FAHNSITFNRMVD---IIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKK 126
F+ + +T+N +++ + GK + E ++E G V ++ L ++ +
Sbjct: 411 FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDV--VSYSTVLSGFCRSYDVDE 468
Query: 127 MVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIK 185
+ M + G + + +++ C+++ EA L + L + P+E Y LI
Sbjct: 469 ALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALIN 528
Query: 186 GYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEA----MKVFQMMRV- 240
YC GDL +A ++ N M ++G P + +I K ++ EA +K+F V
Sbjct: 529 AYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVP 588
Query: 241 ---------KRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
+ ++ + +I C +G +++A + E M + + D + +I+
Sbjct: 589 SDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIH 648
Query: 292 GLLARGRLREAYKVVEEIEKPDISLYH----GLIKGLLRLRRAREATQVFREMIKRGCE 346
G G +R+AY + +E+ K L+ L+K L + + E V ++ R CE
Sbjct: 649 GHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVL-RSCE 706
>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
Length = 704
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 152/332 (45%), Gaps = 49/332 (14%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDL--FWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKK 126
FA N +N + + G RN++ L+EM R L+ D ++ + E +EL+K
Sbjct: 138 FAFN--VYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195
Query: 127 MVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-------KYLILK----------- 168
+ + M GC +SL ++ C+ + EA K++ L+
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255
Query: 169 ------------------LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEP 210
L P I Y LI+G+C +G L EAS+I+ M + G P
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRP 315
Query: 211 SIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTM 270
++ +I+ + K EA++ +M +++ ++ TY I+I+ +CK G ++ A +
Sbjct: 316 NVYTYTGLIDGLCGVGKTKEALQPLNLM-IEKDEEPNAVTYNIIINKLCKDGLVADAVEI 374
Query: 271 LEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV------EEIEKPDISLYHGLIKGL 324
+E M KR DN+T + ++ GL A+G L EA K++ PD+ Y+ LI GL
Sbjct: 375 VELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGL 434
Query: 325 LRLRRAREATQVFREMIKR-GCEPTMHTYIML 355
+ R +A ++ ++++ G + T I+L
Sbjct: 435 CKENRLHQALDIYDLLVEKLGAGDRVTTNILL 466
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 121/267 (45%), Gaps = 19/267 (7%)
Query: 165 LILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFK 224
L L L N + L+KG C + +A + M P + + +I F +
Sbjct: 130 LALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCE 189
Query: 225 INKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNL 284
+ ++A+++ M+ L T+ I+ID CK GK+ +A L+EM G+EAD +
Sbjct: 190 GKELEKALELANEMKGSGCS-WSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLV 248
Query: 285 TLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREM 340
+S+I G G L + +E+ + P Y+ LI+G +L + +EA+++F M
Sbjct: 249 VYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFM 308
Query: 341 IKRGCEPTMHTYIMLLQGHLG-KRGRKGPDPL------------VNFDTIFVGGLVKAGK 387
I+RG P ++TY L+ G G + ++ PL V ++ I + L K G
Sbjct: 309 IERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYN-IIINKLCKDGL 367
Query: 388 SLDAAKYVERVMNRGVEVPRFDYNKFL 414
DA + VE + R YN L
Sbjct: 368 VADAVEIVELMKKRRTRPDNITYNILL 394
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 128/286 (44%), Gaps = 9/286 (3%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N++T+N +++ + K + E ++ M +RR D T+ I L L +L +
Sbjct: 351 NAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLL 410
Query: 132 HIM--NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNE-IAYGWLIKGYC 188
++M + + + N ++ LC+ + +A + L E + + + L+
Sbjct: 411 YLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTL 470
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
GD+ +A ++W ++D + D MI+ F K + A + MRV + +
Sbjct: 471 KAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQP-SV 529
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
Y ++ +CK G + QA+ + EEM + D ++ + +I G L G ++ A ++
Sbjct: 530 FDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVG 589
Query: 309 IEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
+ + PD+ Y LI L+L EA F +M+ G EP H
Sbjct: 590 MSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAH 635
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 109/224 (48%), Gaps = 14/224 (6%)
Query: 147 NKVVKTLCQRKLVVEAK---YLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLM 203
N ++ LC + + EA YL+LK S + P+ I+Y LI G C L +A I++L+
Sbjct: 391 NILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLL 450
Query: 204 TDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM---RVKRMDDLGLSTYRIVIDWMCK 260
++ + ++ + K ++AM++++ + ++ R D TY +ID CK
Sbjct: 451 VEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSD----TYTAMIDGFCK 506
Query: 261 RGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISL 316
G ++ A +L +M ++ + ++ L G L +A+++ EE+++ PD+
Sbjct: 507 TGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVS 566
Query: 317 YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL 360
++ +I G L+ + A + M + G P + TY L+ L
Sbjct: 567 FNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFL 610
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 59/291 (20%), Positives = 130/291 (44%), Gaps = 20/291 (6%)
Query: 36 NLTHEFFLQ-ICNNFPL--SWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKS----R 88
N+T+ L +C L + + +YL + + P + I++N ++ + K +
Sbjct: 387 NITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDP----DVISYNALIHGLCKENRLHQ 442
Query: 89 NIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNK 148
+D++ ++++G V T I L + + ++ K + + ++D + +
Sbjct: 443 ALDIYDLLVEKLGAGDRV---TTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTA 499
Query: 149 VVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEG 207
++ C+ ++ AK L+ K+ ++P+ Y L+ C G L +A +++ M +
Sbjct: 500 MIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDN 559
Query: 208 FEPSIDVVDKMIETFFKIN--KDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKIS 265
P + + MI+ K K E++ V M R DL TY +I+ K G +
Sbjct: 560 NFPDVVSFNIMIDGSLKAGDIKSAESLLV-GMSRAGLSPDL--FTYSKLINRFLKLGYLD 616
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISL 316
+A + ++M G E D S++ +++G + ++V+++ DI L
Sbjct: 617 EAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVL 667
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/414 (23%), Positives = 175/414 (42%), Gaps = 32/414 (7%)
Query: 73 NSITFNRMVDIIGKSRN----IDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMV 128
+++T+N ++D K + + L E L+ +V T+ L + V
Sbjct: 612 DAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVV---TYTTLCHGLCRSGRFDEAV 668
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS--EWIKPNEIAYGWLIKG 186
M GC + + +V LC+ V EA K++ E + P+ IAY LI G
Sbjct: 669 EILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDG 728
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
C G + EA + M G P + +I + D +++F M +R
Sbjct: 729 LCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGM-AERGCKA 787
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA---Y 303
+ Y +I+ C +G+ S AY +LEEM GI + +T +I L R+ EA +
Sbjct: 788 DIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYF 847
Query: 304 KVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
+ E + +IS Y+ LI L+ RR+ +A ++ R M+ G P Y+ ++ G L K
Sbjct: 848 HSIPEDCRDEIS-YNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDG-LFKA 905
Query: 364 G-------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY 410
G +G P + TI + GL KA + A Y E ++ + ++ Y
Sbjct: 906 GSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVY 965
Query: 411 NKFLHYYSNEEGVVMFEEVGKKLREVGLADLADIFQRYGKKMATRERRRNRAIE 464
+ + + + V ++ K LR G+ ++ + + R ++A+E
Sbjct: 966 SSLIDAFCKADKV---DDAWKLLRSSGIEPTITMYSTMVDSLC-KNRGTDKALE 1015
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 141/309 (45%), Gaps = 25/309 (8%)
Query: 65 KAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRE 123
KA PC N + FN +++ + ++R +D +E M D T+ I L L ++R
Sbjct: 302 KAMPCVP-NVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRR 360
Query: 124 LKKMVNFFHIMNDC-GCEYSLEMLNKVVKTLCQRKLVVEA--KYLILKLSEWIKPNEIAY 180
+ + +M GC ++ + +++ LC V +A Y + E I PN Y
Sbjct: 361 IPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTY 420
Query: 181 GWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
+L++G C GD + + M + + S + + I+ + + Q+ R
Sbjct: 421 AFLLEGLCKAGDSRRLEQCFEQMLEREWRSS---------SSWPIHSPEVDFLMVQVCRP 471
Query: 241 KRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
L TY ++ + K G + A +LE M + G+ D +T +S++ GL R+
Sbjct: 472 T------LVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRIL 525
Query: 301 EAYKV----VEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
+A+ V +E +P++ Y LI GL ++ + EA Q+ +M++ GC TY ++
Sbjct: 526 DAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVV 585
Query: 357 QGHLGKRGR 365
G L K GR
Sbjct: 586 DGLL-KVGR 593
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 93/420 (22%), Positives = 173/420 (41%), Gaps = 54/420 (12%)
Query: 47 NNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEM-GRRRL 105
N + R F + + Q F +T++ ++D + + +D + L+EM GR
Sbjct: 9 NGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRGCA 68
Query: 106 VNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYL 165
N T+ + L K+ + M GC L ++K LC+ +EA +
Sbjct: 69 PNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG-EIEAAFR 127
Query: 166 ILK--LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFF 223
++ + P+ + L+ C++G + EA + + GF P + M++ +
Sbjct: 128 VVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLY 187
Query: 224 KINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADN 283
K + + A V Q++ + + T+ I +D + K G ++ AY + M + G+ +
Sbjct: 188 KAGRLEAAGMVLQLL-AESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNT 246
Query: 284 LT--------------------------------LSSIIYGLLARGRLREAYKVVEEIE- 310
+T SS+++GL RL EA ++++ +
Sbjct: 247 VTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMPC 306
Query: 311 KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG------------ 358
P++ ++ L+ GL + RR EA ++F M + GC + TY +LL+G
Sbjct: 307 VPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYR 366
Query: 359 --HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVER-VMNRGVEVPRFDYNKFLH 415
L +R +V F T+ + GL AG+ A + ER V G+ RF Y L
Sbjct: 367 HVELMRRTEGCSPNVVTFSTL-IQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLE 425
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 127/298 (42%), Gaps = 10/298 (3%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQ---EMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
N +T++ ++D + K +D + L E+G R N T+ + L +V ++ V
Sbjct: 542 NVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCR--ANTVTYSTVVDGLLKVGRMEDAVV 599
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYC 188
M D GC N ++ +R+ + EA L+ ++ E P+ + Y L G C
Sbjct: 600 VLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLC 659
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
G EA +I + M G P+ +++ K + EA+ F+ M + +
Sbjct: 660 RSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHV 719
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV--- 305
Y +ID +CK G+I +AY LE M + G D +T S +I GL GR+ ++
Sbjct: 720 IAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCG 779
Query: 306 -VEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
E K DI Y+ +I A + EM G T+ ++++ G
Sbjct: 780 MAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGN 837
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 142/328 (43%), Gaps = 37/328 (11%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRR-RLVNDKTFKIALMTLAEVRELKKMVN 129
A + I ++ ++D + K+ ID +E L+ M R R+ + TF I + L + + +
Sbjct: 716 APHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLE 775
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYC 188
F M + GC+ + N ++ C + A L+ ++ + I N + +G +IK C
Sbjct: 776 LFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALC 835
Query: 189 -----------------DVGDLI----------------EASKIWNLMTDEGFEPSIDVV 215
D D I +A ++ M +G P
Sbjct: 836 GNDRIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNY 895
Query: 216 DKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMF 275
+++ FK + A K+ Q MR R L TY I+I + K ++ A EEM
Sbjct: 896 MTVMDGLFKAGSPEVAAKLLQEMR-SRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEML 954
Query: 276 KRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-KPDISLYHGLIKGLLRLRRAREAT 334
++ ++ D + SS+I ++ +A+K++ +P I++Y ++ L + R +A
Sbjct: 955 RKNLKPDAIVYSSLIDAFCKADKVDDAWKLLRSSGIEPTITMYSTMVDSLCKNRGTDKAL 1014
Query: 335 QVFREMIKRGCEPTMHTYIMLLQGHLGK 362
+V REM + CEP +H + L ++ +
Sbjct: 1015 EVIREMKSKNCEPGIHIWTSLATAYVAE 1042
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 112/254 (44%), Gaps = 19/254 (7%)
Query: 178 IAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQM 237
+ Y LI G C G + +A + GF P++ +I+ + N+ D+ K+ +
Sbjct: 2 VTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEE 61
Query: 238 MRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
M R TY +++ + +G+ +A+++LE M G + +T II GL G
Sbjct: 62 M-AGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120
Query: 298 RLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYI 353
+ A++VV+E+ PD+ ++ L+ L L R EA F++++ G P TY
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYN 180
Query: 354 MLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMN 400
++ G L K GR P V TI V GL KAG A ++ + +
Sbjct: 181 TMVDG-LYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQ 239
Query: 401 RGVEVPRFDYNKFL 414
GV Y+ +
Sbjct: 240 TGVSPNTVTYDALI 253
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 95/455 (20%), Positives = 182/455 (40%), Gaps = 79/455 (17%)
Query: 56 VYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRR-RLVNDKTFKIA 114
+ FFQ Q F +++T+N MVD + K+ ++ LQ + TF IA
Sbjct: 160 AWFFFQ--QVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIA 217
Query: 115 LMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQR-KLVVEAKYL-------- 165
+ L++ L FF M G + + ++ LC+ KL + L
Sbjct: 218 VDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAG 277
Query: 166 -------------ILKLSEWIK--------PNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
+L E I+ PN + + L+ G C + EA +++++M
Sbjct: 278 MFAFSSLLHGLCQAHRLEEAIQLLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMK 337
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
+ G + + +++ K+ + EA + ++MR + T+ +I +C G++
Sbjct: 338 ESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRV 397
Query: 265 SQAYTMLEEMFK-RGIEADNLTLSSIIYGLLARG---RLREAYKVVEEIE---------- 310
+QA+ + E M GI + T + ++ GL G RL + ++ + E E
Sbjct: 398 NQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIH 457
Query: 311 ------------KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+P + Y+ L+ GL + R+A + MI+ G P + T+ +L G
Sbjct: 458 SPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDG 517
Query: 359 -----------HLGKRG-RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
++ KR +G P V + + GL K K +A + + +++ G
Sbjct: 518 LCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRAN 577
Query: 407 RFDYNK----FLHYYSNEEGVVMFEEVGKKLREVG 437
Y+ L E+ VV+ +++R+ G
Sbjct: 578 TVTYSTVVDGLLKVGRMEDAVVVL----RQMRDAG 608
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 103/270 (38%), Gaps = 39/270 (14%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFH-I 133
+N M++ + L+EM + N T I + L + + V++FH I
Sbjct: 791 AYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSI 850
Query: 134 MNDCGCEYS-----------------LEMLNKVVKT-----LCQRKLV-----------V 160
DC E S LE+L +V C V V
Sbjct: 851 PEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEV 910
Query: 161 EAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIE 220
AK L S P+ Y +I G L A + M + +P V +I+
Sbjct: 911 AAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLID 970
Query: 221 TFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIE 280
F K +K D+A K+ + ++ ++ Y ++D +CK +A ++ EM + E
Sbjct: 971 AFCKADKVDDAWKLLRSSGIEPT----ITMYSTMVDSLCKNRGTDKALEVIREMKSKNCE 1026
Query: 281 ADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
+S+ +A GR+ EA K+V +++
Sbjct: 1027 PGIHIWTSLATAYVAEGRVDEAVKLVNDLQ 1056
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 142/292 (48%), Gaps = 7/292 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
N +T+ +V+ + K +IDL + L +M ++ N + + +L + R +N F
Sbjct: 224 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLF 283
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDV 190
M + G ++ + ++ LC + +A L+ + E I PN + + LI +
Sbjct: 284 TEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKE 343
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G L+EA K+++ M +P I +I F ++ DEA +F++M K + T
Sbjct: 344 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP-NVVT 402
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y +I+ CK +I + + EM +RG+ + +T +++I+G A V +++
Sbjct: 403 YNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 462
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
P+I Y+ L+ GL + + +A VF + + EPT++TY ++++G
Sbjct: 463 SDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEG 514
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 128/291 (43%), Gaps = 18/291 (6%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEA 196
GC+ +L VV LC+R + A L+ K+ + I+ N + Y +I C +A
Sbjct: 220 GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDA 279
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVID 256
++ M ++G P++ +I + +A ++ M ++R + + T+ +ID
Sbjct: 280 LNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDM-IERKINPNVVTFNALID 338
Query: 257 WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE-EIEK---P 312
K GK+ +A + +EM KR I+ D T SS+I G RL EA + E I K P
Sbjct: 339 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 398
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG-------- 364
++ Y+ LI G + +R E ++FREM +RG TY L+ G R
Sbjct: 399 NVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 458
Query: 365 ----RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
G P + + GL K GK A E + +E + YN
Sbjct: 459 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 509
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 89/163 (54%), Gaps = 14/163 (8%)
Query: 210 PSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKIS 265
PSI +K++ K+ K D + + + +M LG+S TY I+I+ C+R +IS
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGE-----KMQRLGISHNLYTYNILINCFCRRSQIS 137
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLI 321
A +L +M K G E +TLSS++ G R+ +A +V+++ +PD + LI
Sbjct: 138 LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 197
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
GL +A EA + M++RGC+P + TY +++ G L KRG
Sbjct: 198 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG-LCKRG 239
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 99/210 (47%), Gaps = 6/210 (2%)
Query: 147 NKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
+ ++ C + EAK++ L +S+ PN + Y LI G+C + E +++ M+
Sbjct: 369 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQ 428
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKIS 265
G + +I FF+ D A VF+ M V + TY ++D +CK GK+
Sbjct: 429 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM-VSDGVHPNIMTYNTLLDGLCKNGKLE 487
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLI 321
+A + E + + +E T + +I G+ G++ + + + + KPD+ +Y+ +I
Sbjct: 488 KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMI 547
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHT 351
G R EA +FR+M + G P T
Sbjct: 548 SGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 109/232 (46%), Gaps = 3/232 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N +TFN ++D K + + EM +R + D T+ + L + + F
Sbjct: 329 NVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 388
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
+M C ++ N ++ C+ K + E L ++S+ + N + Y LI G+
Sbjct: 389 ELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQA 448
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
D A ++ M +G P+I + +++ K K ++AM VF+ ++ +M+ + T
Sbjct: 449 RDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT-IYT 507
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
Y I+I+ MCK GK+ + + + +G++ D + +++I G +G EA
Sbjct: 508 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEA 559
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 126/311 (40%), Gaps = 72/311 (23%)
Query: 165 LILKLSE-----WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSI------- 212
L++ L E I N Y LI +C + A + M G+EPSI
Sbjct: 103 LVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162
Query: 213 -------------DVVDKMIE--------TF-------FKINKDDEAMKVFQMMRVKRMD 244
+VD+M+E TF F NK EA+ + M V+R
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM-VQRGC 221
Query: 245 DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK 304
L TY +V++ +CKRG I A+ +L +M IEA+ + S++I L +A
Sbjct: 222 QPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALN 281
Query: 305 VVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL 360
+ E+E +P++ Y LI L R +A+++ +MI+R P + T+ L+
Sbjct: 282 LFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALID--- 338
Query: 361 GKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY----NKFLHY 416
VK GK ++A K + ++ R ++ F Y N F +
Sbjct: 339 --------------------AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 378
Query: 417 YSNEEGVVMFE 427
+E MFE
Sbjct: 379 DRLDEAKHMFE 389
>gi|46091161|dbj|BAD13709.1| PPR protein [Oryza sativa Indica Group]
Length = 332
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 140/288 (48%), Gaps = 7/288 (2%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMV 128
+ N +T+N ++ + K++ +D E L M + ++ D T+ + + K+ +
Sbjct: 43 ISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAI 102
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGY 187
F M G E + N ++ LC+ EA+ + +++ +KP+ YG L++GY
Sbjct: 103 VFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGY 162
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
G L+E + +LM G P+ V ++ + K K +EAM VF MR + ++
Sbjct: 163 ATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNA 222
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
+ TY VID +CK G++ A E+M G+ D++ +S+I+ L + +A ++
Sbjct: 223 V-TYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFL 281
Query: 308 EIEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
E+ I L ++ +I + R E+ ++F M++ G +P + T
Sbjct: 282 EMLDRGICLSTIFFNSIIDSHCKEGRVIESVKLFDLMVRIGVKPDIIT 329
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 121/259 (46%), Gaps = 21/259 (8%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+ ++Y +I G+ GDL + +N M D+ P++ + +I K D+AM+V
Sbjct: 10 PDVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVDKAMEV 69
Query: 235 F-QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
M++ M D TY ++ C G+ +A L++M G+E D +T +S++ L
Sbjct: 70 LTTMVKSGVMPD--CMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYL 127
Query: 294 LARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
GR EA K+ + + KPDI+ Y L++G E + M++ G P
Sbjct: 128 CKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNH 187
Query: 350 HTYIMLLQGH------------LGKRGRKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVE 396
+ + +L+ + K ++G +P V + T+ + L K+G+ DA Y E
Sbjct: 188 YVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTV-IDVLCKSGRVEDAMLYFE 246
Query: 397 RVMNRGVEVPRFDYNKFLH 415
++++ G+ YN +H
Sbjct: 247 QMIDEGLRPDSIVYNSLIH 265
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 113/242 (46%), Gaps = 30/242 (12%)
Query: 203 MTDEGFEPSIDVVD--KMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCK 260
M D+G + DVV +I FFK D+ + M KR+ + TY +I +CK
Sbjct: 1 MADDGGDCPPDVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISP-NVVTYNSIIAALCK 59
Query: 261 RGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISL 316
+ +A +L M K G+ D +T +SI++G + G+ +EA ++++ +PD+
Sbjct: 60 AQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVT 119
Query: 317 YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDT 376
Y+ L+ L + R EA ++F M KRG +P + TY LLQG+ K
Sbjct: 120 YNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATK-------------- 165
Query: 377 IFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREV 436
G LV+ LD ++ G+ + ++ + Y+ +E V V K+R+
Sbjct: 166 ---GALVEMHGLLDL------MVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQ 216
Query: 437 GL 438
GL
Sbjct: 217 GL 218
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 112/249 (44%), Gaps = 11/249 (4%)
Query: 44 QICNNFPLSWRP----VYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQE 99
I + F S +P V+L + +P + +T+N ++D + K+ +
Sbjct: 87 SIVHGFCSSGQPKEAIVFLKKMRSDGVEP----DVVTYNSLMDYLCKNGRCTEARKIFDS 142
Query: 100 MGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKL 158
M +R L D T+ L A L +M +M G + + + +V +++
Sbjct: 143 MTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEK 202
Query: 159 VVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDK 217
V EA + K+ + + PN + YG +I C G + +A + M DEG P V +
Sbjct: 203 VEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNS 262
Query: 218 MIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKR 277
+I + +K ++A ++F M + R L + +ID CK G++ ++ + + M +
Sbjct: 263 LIHSLCIFDKWEKAEELFLEM-LDRGICLSTIFFNSIIDSHCKEGRVIESVKLFDLMVRI 321
Query: 278 GIEADNLTL 286
G++ D +TL
Sbjct: 322 GVKPDIITL 330
>gi|297803426|ref|XP_002869597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315433|gb|EFH45856.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 538
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 114/234 (48%), Gaps = 6/234 (2%)
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYC 188
F+ M C + LN V+ C+ + + L+ + + ++Y LI G+C
Sbjct: 225 FYREMRRCKISPNTYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATHVSYNTLIAGHC 284
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
+ G L A K+ N+M G +P++ + +I F + K EA KVF M+ +
Sbjct: 285 EKGLLSSALKLKNMMGKNGLQPNVVTFNTLIHGFCRAVKLQEASKVFGEMKALNLPP-NT 343
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY +I+ ++G A+ E+M GI+ D LT +++I GL + + R+A + V+E
Sbjct: 344 VTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNTLILGLCKQAKTRKAAQFVKE 403
Query: 309 IEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
++K P+ S + LI G R A ++++ MI+ GC P T+ +L+
Sbjct: 404 LDKENLVPNSSTFSALIMGQCVRRNADRGFELYKSMIRSGCHPNEQTFNILISA 457
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 114/237 (48%), Gaps = 21/237 (8%)
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
+ L K + + A+ + M D GF P+++ + + + + D A++ ++ MR
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
++ T +V+ C+ GK+ + +L++M + G A +++ +++I G +G L
Sbjct: 231 RCKISP-NTYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATHVSYNTLIAGHCEKGLL 289
Query: 300 REAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
A K+ + K P++ ++ LI G R + +EA++VF EM P TY L
Sbjct: 290 SSALKLKNMMGKNGLQPNVVTFNTLIHGFCRAVKLQEASKVFGEMKALNLPPNTVTYNTL 349
Query: 356 LQGHLGKRG------RKGPDPLVN--------FDTIFVGGLVKAGKSLDAAKYVERV 398
+ G+ ++G R D + N ++T+ + GL K K+ AA++V+ +
Sbjct: 350 INGY-SQQGDHEMAFRFYEDMVCNGIQRDILTYNTLIL-GLCKQAKTRKAAQFVKEL 404
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 110/278 (39%), Gaps = 15/278 (5%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
N+ T N ++ +S +D E LQ+M R ++ + E L +
Sbjct: 237 NTYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATHVSYNTLIAGHCEKGLLSSALKLK 296
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDV 190
++M G + ++ N ++ C+ + EA + ++ + PN + Y LI GY
Sbjct: 297 NMMGKNGLQPNVVTFNTLIHGFCRAVKLQEASKVFGEMKALNLPPNTVTYNTLINGYSQQ 356
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL-- 248
GD A + + M G + I + +I K K +A + VK +D L
Sbjct: 357 GDHEMAFRFYEDMVCNGIQRDILTYNTLILGLCKQAKTRKAAQF-----VKELDKENLVP 411
Query: 249 --STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
ST+ +I C R + + + + M + G + T + +I A +V+
Sbjct: 412 NSSTFSALIMGQCVRRNADRGFELYKSMIRSGCHPNEQTFNILISAFCKNEDFDGAAQVL 471
Query: 307 EEIEKPDISL----YHGLIKGLLRLRRAREATQVFREM 340
E+ + I L H + GL + + ++ +EM
Sbjct: 472 REMVRRSIPLDSRTVHQVCNGLNHQGKDQLVKELLQEM 509
>gi|357520891|ref|XP_003630734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524756|gb|AET05210.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 520
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/431 (23%), Positives = 194/431 (45%), Gaps = 31/431 (7%)
Query: 2 PVDPGHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQI---CNNFPLSWRPVYL 58
P+ P + + I+ ++ P L SL+ + ++ + Q+ CN+ S +L
Sbjct: 37 PLLPELVNEISRIVSDHRH-PRHDLELSLTPFSTQISTDLVEQVLKRCNHLGFSAHRFFL 95
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETL---QEMGRRRLVNDKTFKIAL 115
+ K+ P F H+ +F+ +V+I+G+S+ + W+ L +E + ++ F I
Sbjct: 96 W----AKSIPGFQHSVQSFHILVEILGRSKQFAILWDFLIETRESDSSCKITNEIFWIIF 151
Query: 116 MTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKP 175
+ + F M++ G + S+ ++ ++ TLC++K V +A+ ++
Sbjct: 152 TAYSRADLPDGAIRSFVRMDEFGIKPSIIDVDLLLYTLCKKKHVRQAQQFFDQVKSHFLL 211
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
Y LI G+ +GD +A ++++ M ++G + + ++E K DEAM
Sbjct: 212 TTKTYSILINGWGKIGDSGKARELFDAMLEQGCHVDLLAYNNLLEALCKGGHVDEAMDFL 271
Query: 236 QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
M K+++ TY I I C + A+ +L++M + + + T + II L
Sbjct: 272 NDMLSKKVEPDAF-TYSIFIRSYCDANNVHSAFGVLDKMRRCNLLPNVFTYNCIIKRLCK 330
Query: 296 RGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
++ EAY++++E+ KPD Y+ + A ++ M K C P HT
Sbjct: 331 IKKVEEAYQLLDEMISSGLKPDTWSYNAIQAYHCDHCEVNRALKLISRMEKDVCFPDRHT 390
Query: 352 YIMLLQ-----GHLGKR-------GRKGPDPLVNFDTIFVGGLV-KAGKSLDAAKYVERV 398
Y M+L+ G K G K P V+ ++ + GL K GK +A KY +
Sbjct: 391 YNMVLKLLIRIGRFDKATEVWECMGDKKFYPSVSTYSVMIHGLCKKKGKLEEACKYFAMM 450
Query: 399 MNRGVEVPRFD 409
++ G +P +D
Sbjct: 451 IDEG--IPPYD 459
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 160/348 (45%), Gaps = 23/348 (6%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+ + ++D + K R + + +M + + D T+ + +L + E K + +
Sbjct: 208 VVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQ 267
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGD 192
M + + + + VV LC+ + EA ++ + + ++PN + Y L+ G+C +
Sbjct: 268 MINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSE 327
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ EA K+++ M G+ P++ + +I + KI + D+A +F+ M K + TY
Sbjct: 328 MDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIP-NTVTYN 386
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
++ +C G++ A + EM G D T ++ L + L EA +++ IE
Sbjct: 387 TLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGS 446
Query: 311 --KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG---- 364
PDI +Y +I G+ R A +F + +G P + TY +++ G L +RG
Sbjct: 447 NMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMING-LCRRGLLDE 505
Query: 365 ---------RKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
G P ++TI GL++ ++L A + ++ ++ RG
Sbjct: 506 ANKLFMEMDGNGCSPDGCTYNTI-TQGLLQNKEALRAIQLLQEMLARG 552
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 120/240 (50%), Gaps = 6/240 (2%)
Query: 123 ELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYG 181
E+ + V F M G ++ N ++ C+ + + +A YL ++ + + PN + Y
Sbjct: 327 EMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYN 386
Query: 182 WLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK 241
L+ G C VG L +A +++ M G P + +++ K + DEAM + + +
Sbjct: 387 TLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGS 446
Query: 242 RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
MD + Y IVID MC+ G++ A + + +G+ + T + +I GL RG L E
Sbjct: 447 NMDP-DIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDE 505
Query: 302 AYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
A K+ E++ PD Y+ + +GLL+ + A A Q+ +EM+ RG + T +L++
Sbjct: 506 ANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVE 565
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 152/346 (43%), Gaps = 70/346 (20%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
+++ FNR++ I K++ + +M +F I +V L ++N F
Sbjct: 66 STVDFNRLLTSIAKTKQYPTVFSLSNQM--------DSFGIP----PDVYTLNILINSFC 113
Query: 133 IMNDCGCEYSL-------------EMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEI 178
+N G +S+ +++ LC + +A +L K+ E +PN +
Sbjct: 114 HLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVV 173
Query: 179 AYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF--- 235
YG LI G C VG+ A ++ M +P + V +I++ K + EA +F
Sbjct: 174 TYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKM 233
Query: 236 ---------------------------------QMMRVKRMDDLGLSTYRIVIDWMCKRG 262
QM+ K M D+ + + V+D +CK G
Sbjct: 234 VGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVI--FSTVVDALCKEG 291
Query: 263 KISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYH 318
KI++A+ +++ M RG+E + +T ++++ G + + EA KV + + P++ Y+
Sbjct: 292 KITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYN 351
Query: 319 GLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG--HLGK 362
LI G +++R +AT +F EM ++ P TY L+ G H+G+
Sbjct: 352 TLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGR 397
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 142/304 (46%), Gaps = 19/304 (6%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
N T+ + L +V + M C+ + + ++ +LC+ + V EA L
Sbjct: 171 NVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLF 230
Query: 167 LKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI 225
K+ + I P+ Y LI C++ + + + N M + P + + +++ K
Sbjct: 231 SKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKE 290
Query: 226 NKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
K EA V MM ++ ++ + TY ++D C + ++ +A + + M G + ++
Sbjct: 291 GKITEAHDVVDMMIIRGVEP-NVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVIS 349
Query: 286 LSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMI 341
+++I G R+ +A + EE+ + P+ Y+ L+ GL + R ++A +F EM+
Sbjct: 350 YNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMV 409
Query: 342 KRGCEPTMHTYIMLL-----QGHLGK-----RGRKGP--DPLVNFDTIFVGGLVKAGKSL 389
G P + TY +LL + HL + + +G DP + TI + G+ +AG+ L
Sbjct: 410 AHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGE-L 468
Query: 390 DAAK 393
+AA+
Sbjct: 469 EAAR 472
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 125/278 (44%), Gaps = 27/278 (9%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+ + + L+ + N M G P + ++ +I +F +N+ A V
Sbjct: 65 PSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSV 124
Query: 235 F-QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
+++++ D +T+ +I +C GKI A + ++M G + + +T ++I GL
Sbjct: 125 LAKILKLGLQPDT--ATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGL 182
Query: 294 LARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
G A +++ +E+ PD+ +Y +I L + R+ EA +F +M+ +G P +
Sbjct: 183 CKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDI 242
Query: 350 HTYIMLLQG--------HLGK------RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYV 395
TY L+ H+ + PD +V F T+ V L K GK +A V
Sbjct: 243 FTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPD-VVIFSTV-VDALCKEGKITEAHDVV 300
Query: 396 ERVMNRGVEVPRFDYNKFL--HYYSNE--EGVVMFEEV 429
+ ++ RGVE YN + H +E E V +F+ +
Sbjct: 301 DMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTM 338
>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
Length = 578
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 163/381 (42%), Gaps = 41/381 (10%)
Query: 56 VYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIA 114
Y F ++ P ++ + N ++ + ++ +DL + + RRR+ D TF
Sbjct: 138 AYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTV 197
Query: 115 LMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-- 172
+ L + +L+K + + G S+ N ++ C++ ++ + L E
Sbjct: 198 ISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVE 257
Query: 173 --IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDE 230
I P + +G LI GYC + A +++ M +G S+ + +I K +E
Sbjct: 258 AGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEE 317
Query: 231 AMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTL 286
+K+ + M+DLGLS T+ V+ CK+G ++ A ++ M +R +E D +
Sbjct: 318 GVKLME-----EMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIY 372
Query: 287 SSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIK 342
+ +I G G++ +A V E + K P+++ Y+ LI G R R A+ + EM +
Sbjct: 373 TILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKE 432
Query: 343 RGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
+G E + TY + +G L G+ A K ++ + G
Sbjct: 433 KGIEADVVTY-----------------------NVLIGALCCKGEVRKAVKLLDEMSEVG 469
Query: 403 VEVPRFDYNKFLHYYSNEEGV 423
+E YN + + ++ +
Sbjct: 470 LEPNHLTYNTIIQGFCDKGNI 490
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 151/338 (44%), Gaps = 47/338 (13%)
Query: 70 FAHNSITFNRMVDI------IGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRE 123
A + T+N ++D G ++D+ + + E G TF + + +
Sbjct: 222 LAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTA--VTFGVLINGYCKNSN 279
Query: 124 LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGW 182
V F M G S+ N ++ LC V E L+ ++ + + PNEI +G
Sbjct: 280 TAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGC 339
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK- 241
++KG+C G + +A+ + MT+ EP + + +I+ + ++ K ++AM V + M K
Sbjct: 340 VLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKG 399
Query: 242 -----------------------------RMDDLGLS----TYRIVIDWMCKRGKISQAY 268
M + G+ TY ++I +C +G++ +A
Sbjct: 400 ISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAV 459
Query: 269 TMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGL 324
+L+EM + G+E ++LT ++II G +G ++ AY++ +EK ++ Y+ IK
Sbjct: 460 KLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYF 519
Query: 325 LRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
++ + EA + EM+ + P TY + +G + K
Sbjct: 520 CQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEK 557
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 62/125 (49%), Gaps = 1/125 (0%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
I+ + + Y LI C G++ +A K+ + M++ G EP+ + +I+ F A
Sbjct: 435 IEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAY 494
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
++ M R + TY + I + C+ GK+ +A +L EM + + + +T +I G
Sbjct: 495 EIRTRMEKCR-KRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEG 553
Query: 293 LLARG 297
++ +G
Sbjct: 554 MMEKG 558
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 71/168 (42%), Gaps = 23/168 (13%)
Query: 285 TLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREM 340
++++++ GL+ R+ A K + PDI ++ +I GL R+ + R+A V +++
Sbjct: 158 SVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDI 217
Query: 341 IKRGCEPTMHTYIMLLQGHLGKRG---------------RKGPDPLVNFDTIFVGGLVKA 385
G P++ TY L+ G+ K G G P + + G K
Sbjct: 218 KAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKN 277
Query: 386 GKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN----EEGVVMFEEV 429
+ A + E + +G+ YN + + EEGV + EE+
Sbjct: 278 SNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEM 325
>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 689
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 186/394 (47%), Gaps = 33/394 (8%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKT-FKIALMTLAEVRELKKMV 128
F + +++ +++ + K+ +D E EM RR+ D T + I + + ++ K +
Sbjct: 180 FKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAM 239
Query: 129 NFF-HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNE-----IAYGW 182
+ ++ D +++ N ++ L + V + LK+ + +K NE Y
Sbjct: 240 QLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDC----LKIWDRMKQNEREKDLYTYSS 295
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVV--DKMIETFFKINKDDEAMKVFQMMRV 240
LI G CD G++ +A ++N + + + IDVV + M+ F + K E+++++++M
Sbjct: 296 LIHGLCDEGNVDKAESVFNELVER--KAFIDVVTYNTMLGGFCRCGKIKESLELWRIM-- 351
Query: 241 KRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
++ + + + +Y I+I + + GKI +A + M +G ADN T I+GL G +
Sbjct: 352 EQRNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVN 411
Query: 301 EAYKVVEEIEKP----DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
+A V++E+E D+ Y +I L + RR EA+ + +EM K G E H L+
Sbjct: 412 KALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALI 471
Query: 357 QGHLGKR------------GRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVE 404
G + G+ G P V I + GL +AGK +A+ +V+ ++ G++
Sbjct: 472 GGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLK 531
Query: 405 VPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
Y+ L + + + E+ + + GL
Sbjct: 532 PDLKTYSILLGGLCRDRKIELALELWHQFLQSGL 565
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 160/364 (43%), Gaps = 22/364 (6%)
Query: 73 NSITFNRMVDIIGKSRNID---LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
N T N M+ + K +D W+ +++ R + + T+ + L + + K +
Sbjct: 254 NVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREK--DLYTYSSLIHGLCDEGNVDKAES 311
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCD 189
F+ + + + N ++ C+ + E+ L + + N ++Y LIKG +
Sbjct: 312 VFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRNSVNIVSYNILIKGLLE 371
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
G + EA+ IW LM +G+ I ++A+ V Q + K L +
Sbjct: 372 NGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKG-GHLDVY 430
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
Y +ID +CK+ ++ +A +++EM K G+E ++ +++I GL+ RL +A ++ +
Sbjct: 431 AYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGM 490
Query: 310 EK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG- 364
K P + Y+ LI GL + EA+ +EM++ G +P + TY +LL G R
Sbjct: 491 GKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKI 550
Query: 365 -----------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
+ G +P V I + GL GK DA + + +R YN
Sbjct: 551 ELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTL 610
Query: 414 LHYY 417
+ Y
Sbjct: 611 MEGY 614
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 137/298 (45%), Gaps = 19/298 (6%)
Query: 73 NSITFNRMVDIIGKSRNID---LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
N +++N ++ + ++ ID + W + G ++ T+ I + L + K +
Sbjct: 358 NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYA--ADNTTYGIFIHGLCVNGYVNKALG 415
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYC 188
+ G + ++ LC+++ + EA L+ ++S+ ++ N LI G
Sbjct: 416 VMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLI 475
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
L +AS + M G P++ + +I + K EA VK M + GL
Sbjct: 476 RDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAF-----VKEMLENGL 530
Query: 249 S----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK 304
TY I++ +C+ KI A + + + G+E D + + +I+GL + G+L +A
Sbjct: 531 KPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMT 590
Query: 305 VVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
V+ +E ++ Y+ L++G ++R + AT ++ M K G +P + +Y +L+G
Sbjct: 591 VMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKG 648
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 141/326 (43%), Gaps = 15/326 (4%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIM 134
+T+N M+ + I E + M +R VN ++ I + L E ++ + + +M
Sbjct: 326 VTYNTMLGGFCRCGKIKESLELWRIMEQRNSVNIVSYNILIKGLLENGKIDEATMIWRLM 385
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDL 193
G + LC V +A ++ ++ S+ + AY +I C L
Sbjct: 386 PAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRL 445
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
EAS + M+ G E + V + +I + ++ +A + + M K + +Y I
Sbjct: 446 EEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMG-KNGCLPTVVSYNI 504
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR-----LREAYKVVEE 308
+I +C+ GK +A ++EM + G++ D L SI+ G L R R L ++ ++
Sbjct: 505 LICGLCEAGKFGEASAFVKEMLENGLKPD-LKTYSILLGGLCRDRKIELALELWHQFLQS 563
Query: 309 IEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGP 368
+PD+ +++ LI GL + + +A V M R C + TY L++G+ R
Sbjct: 564 GLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDS--- 620
Query: 369 DPLVNFDTIFVGGLVKAGKSLDAAKY 394
N T+ G + K G D Y
Sbjct: 621 ----NRATVIWGYMYKMGLQPDIISY 642
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 117/252 (46%), Gaps = 8/252 (3%)
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPN 176
L + R L++ N M+ G E + + N ++ L + + +A L+ + + P
Sbjct: 439 LCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPT 498
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF- 235
++Y LI G C+ G EAS M + G +P + ++ + K + A++++
Sbjct: 499 VVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWH 558
Query: 236 QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
Q ++ D+ + + I+I +C GK+ A T++ M R A+ +T ++++ G
Sbjct: 559 QFLQSGLEPDVMM--HNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFK 616
Query: 296 RGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
A + + K PDI Y+ ++KGL R A + F + G PT++T
Sbjct: 617 VRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAIEFFDDARNHGIFPTVYT 676
Query: 352 YIMLLQGHLGKR 363
+ +L++ + ++
Sbjct: 677 WNILVRAVVNRK 688
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 103/233 (44%), Gaps = 27/233 (11%)
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQ 266
G EP I + ++ F + + + +F + L TY ++I CK+ + +
Sbjct: 109 GCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAP-NLQTYNVLIKMSCKKKEFEK 167
Query: 267 AYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIK 322
A L M+K G + D + S++I L G+L +A ++ +E+ + PD++ Y+ LI
Sbjct: 168 ARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILID 227
Query: 323 GLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGL 382
G L+ + + A Q++ ++++ + +++ P V I + GL
Sbjct: 228 GFLKEKDHKMAMQLWDKLLE---DSSVY-------------------PNVKTHNIMISGL 265
Query: 383 VKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLRE 435
K G+ D K +R+ E + Y+ +H +E V E V +L E
Sbjct: 266 SKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVE 318
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 164/350 (46%), Gaps = 23/350 (6%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHI- 133
++F+ ++ + + +D L+EM LV D I M + M + +
Sbjct: 236 VSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGV--IYTMVIGGFCRAGLMSDALRVR 293
Query: 134 --MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
M CGC + N ++ LC+ + +++A+ L+ ++ E + P+ + LI GYC
Sbjct: 294 DEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIE 353
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G L +A ++++ M ++ P I + +I+ + D+A ++ M + + + T
Sbjct: 354 GKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHV-T 412
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y I+ID C++G++ A+ L+EM +GI + +T +SII G G + + K ++++
Sbjct: 413 YSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMM 472
Query: 311 ----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------- 359
PD+ Y+ LI G ++ + +A ++ M K +P + TY ML+ G
Sbjct: 473 VNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQ 532
Query: 360 -----LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVE 404
K KG +P + G V AG S +A + + ++ RG E
Sbjct: 533 EAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGKE 582
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 90/401 (22%), Positives = 169/401 (42%), Gaps = 52/401 (12%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N+ T N MV K+ D + EM +R + D T + + + + +
Sbjct: 94 NTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALV 153
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDV 190
M G + + N V+K LC+ + +A + ++ ++ + P+ ++ LI G+C V
Sbjct: 154 DSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRV 213
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR----------- 239
G++ EA KI+ M G +P + +I F + K D AM + MR
Sbjct: 214 GEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIY 273
Query: 240 ----------------VKRMDDL-------GLSTYRIVIDWMCKRGKISQAYTMLEEMFK 276
++ D++ + TY +++ +CK ++ A +L EM +
Sbjct: 274 TMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRE 333
Query: 277 RGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRARE 332
RG+ D T +++I+G G+L +A ++ + + +PDI Y+ LI G+ R +
Sbjct: 334 RGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDK 393
Query: 333 ATQVFREMIKRGCEPTMHTYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVG 380
A ++ +M R P TY +L+ H L + KG P + +
Sbjct: 394 ANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIK 453
Query: 381 GLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEE 421
G ++G K+++++M V YN +H Y E+
Sbjct: 454 GYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKED 494
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 121/262 (46%), Gaps = 23/262 (8%)
Query: 196 ASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVI 255
A+ + L+ E + ++ M+ + K + D+ V M KR + T+ +++
Sbjct: 79 AADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEME-KRCVFPDVVTHNVMV 137
Query: 256 DWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----K 311
D + G A +++ M +G++ +T +S++ GL G +A++V +E++
Sbjct: 138 DARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVA 197
Query: 312 PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKG---- 367
PD+ + LI G R+ EA ++++EM RG +P + ++ L+ G +RG+
Sbjct: 198 PDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLI-GLFARRGKMDHAMA 256
Query: 368 -----------PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHY 416
PD ++ T+ +GG +AG DA + + ++ G YN L+
Sbjct: 257 YLREMRCFGLVPDGVIY--TMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNG 314
Query: 417 YSNEEGVVMFEEVGKKLREVGL 438
E ++ E + ++RE G+
Sbjct: 315 LCKERRLLDAEGLLNEMRERGV 336
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 169/368 (45%), Gaps = 28/368 (7%)
Query: 69 CFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKM 127
C + + +N +D GK+ +D+ W+ E+ L+ +D T+ + L + L +
Sbjct: 263 CLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEA 322
Query: 128 VNFFHIMN---DCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWL 183
V F M + C Y+ N ++ EA L+ + + P+ IAY +
Sbjct: 323 VEIFEQMEQNRNVPCAYA---YNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCI 379
Query: 184 IKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM 243
+ G L EA + + M + P++ + +I+ K + + A KV M+ +
Sbjct: 380 LTCLGKKGRLGEALRTFEEMKKDA-APNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGL 438
Query: 244 DDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
+ T I+ID +CK K+ +A ++ E M + D +T S+I GL +GR+ +AY
Sbjct: 439 FP-NVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAY 497
Query: 304 KVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT---MHTYI--M 354
++ E++ + P+ +Y LIK + R + ++F+EMI RGC P ++ Y+ +
Sbjct: 498 RLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCV 557
Query: 355 LLQGHLGKRGR--------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
G GK GR +G P V +I + GLVKAG + + + + +G +
Sbjct: 558 FKAGETGK-GRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLD 616
Query: 407 RFDYNKFL 414
YN F+
Sbjct: 617 THAYNTFI 624
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 142/312 (45%), Gaps = 46/312 (14%)
Query: 54 RPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEM---GRRRLVNDKT 110
R Y F Y K Q C ++ +N +D KS ++ ++ L+EM GR+ V T
Sbjct: 599 RETYELF-YAMKEQGCVL-DTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTV--VT 654
Query: 111 FKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS 170
+ + LA++ L + F EAK S
Sbjct: 655 YGSVIDGLAKIDRLDEAYMLFE----------------------------EAK------S 680
Query: 171 EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDE 230
++ N + Y LI G+ VG + EA I + +G P++ + +++ K + +E
Sbjct: 681 NGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINE 740
Query: 231 AMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
A+ FQ M+ + + TY I+I+ +C+ K ++A+ +EM K+G++ + +T +++I
Sbjct: 741 ALVCFQNMKNLKGTPNHI-TYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMI 799
Query: 291 YGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
GL G + EA + E + PD + Y+ +I+GL RRA EA ++F E +GC
Sbjct: 800 AGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCN 859
Query: 347 PTMHTYIMLLQG 358
T I LL
Sbjct: 860 IHTKTCIALLDA 871
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 142/328 (43%), Gaps = 40/328 (12%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVN 129
A N T+N ++D++ K+ ++ ++ M L N T I + L + ++L + +
Sbjct: 404 APNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACS 463
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIK-PNEIAYGWLIKGYC 188
F MN C ++ L ++ V +A L ++ + K PN + Y LIK +
Sbjct: 464 IFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFF 523
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK------- 241
G + KI+ M G P + +++ ++ FK + + +F+ ++ +
Sbjct: 524 KCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVM 583
Query: 242 -----------------------RMDDLGL----STYRIVIDWMCKRGKISQAYTMLEEM 274
M + G Y ID CK GK+++AY +LEEM
Sbjct: 584 SYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEM 643
Query: 275 FKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISL----YHGLIKGLLRLRRA 330
+G + +T S+I GL RL EAY + EE + + L Y LI G ++ R
Sbjct: 644 KTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRI 703
Query: 331 REATQVFREMIKRGCEPTMHTYIMLLQG 358
EA + E++++G P ++T+ LL
Sbjct: 704 DEAYLIMEELMQKGLTPNVYTWNCLLDA 731
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 126/276 (45%), Gaps = 19/276 (6%)
Query: 179 AYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
AY I G+C G + +A ++ M +G +P++ +I+ KI++ DEA +F+
Sbjct: 619 AYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 678
Query: 239 RVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR 298
+ ++ L + Y +ID K G+I +AY ++EE+ ++G+ + T + ++ L+
Sbjct: 679 KSNGLE-LNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEE 737
Query: 299 LREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIM 354
+ EA + ++ P+ Y LI GL R+R+ +A ++EM K+G +P TY
Sbjct: 738 INEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTT 797
Query: 355 LLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNR 401
++ G L K G G P + GL + ++++A K E +
Sbjct: 798 MIAG-LAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMK 856
Query: 402 GVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVG 437
G + L +E + VG LRE+
Sbjct: 857 GCNIHTKTCIALLDALQKDECLEQAAIVGAVLREIA 892
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 72/162 (44%), Gaps = 6/162 (3%)
Query: 208 FEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQA 267
F P+ +I + + D + +F M+ + ++ + + VI + G++ A
Sbjct: 194 FRPAFSAYTTLIGALSSVQESDIMLTLFHQMQ-ELGYEVSVHLFTTVIRVFAREGRLDAA 252
Query: 268 YTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKG 323
++L+EM + AD + + I G++ A+K EI+ PD Y +I
Sbjct: 253 LSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGV 312
Query: 324 LLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
L + R EA ++F +M + P + Y ++ G+ G G+
Sbjct: 313 LCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGY-GSAGK 353
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/445 (22%), Positives = 180/445 (40%), Gaps = 68/445 (15%)
Query: 39 HEFFLQICNNFPLSWRPVYLFFQYT----QKAQPCFA--HNSITFNRMVDIIGKSRNIDL 92
H+ L + ++F S+ LF + QP F +++ +N +++++ + + L
Sbjct: 105 HQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKL 164
Query: 93 FWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIMNDCGCE-----YSLEML 146
EMG R + D TF + L +++ V M+ G ++ M
Sbjct: 165 LESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQ 224
Query: 147 NKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDE 206
V + + L V+A+ L + S ++ LI GYC +G + +A +
Sbjct: 225 GFVEEGSIEAALRVKARMLEMGCS----ATKVTVNVLINGYCKLGRVEDALGYIQQEIAD 280
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQ 266
GFEP + + + + A+KV +M V+ D + TY IV++ +CK G++ +
Sbjct: 281 GFEPDQITYNTFVNGLCQNDHVGHALKVMDVM-VQEGHDPDVFTYNIVVNCLCKNGQLEE 339
Query: 267 AYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIK 322
A +L +M RG D T +++I L RL EA + ++ PD+ ++ LI
Sbjct: 340 AKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILIN 399
Query: 323 GLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG--HLGKRGRK-----------GPD 369
L ++ A ++F EM GC P TY L+ LGK G+ P
Sbjct: 400 ALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPR 459
Query: 370 PLVNFDTIFVG----------------------------------GLVKAGKSLDAAKYV 395
+ ++TI G GL K K DA + +
Sbjct: 460 STITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELI 519
Query: 396 ERVMNRGVEVPRFDYNKFLHYYSNE 420
++++ G++ YN L +Y +
Sbjct: 520 NQMISEGLQPNNITYNSILTHYCKQ 544
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 158/359 (44%), Gaps = 22/359 (6%)
Query: 6 GHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQK 65
GH ++V ++ Q+ + P+ ++ + +C +C N L L +
Sbjct: 303 GHALKVMDVMVQEGHDPDVFTYNIVVNC-----------LCKNGQLEEAKGILNQMVDRG 351
Query: 66 AQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVREL 124
P + TFN ++ + ++ + +++ + + D TF I + L +V +
Sbjct: 352 CLP----DITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDP 407
Query: 125 KKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKP-NEIAYGWL 183
+ F M + GC N ++ LC + +A L+ + P + I Y +
Sbjct: 408 HLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTI 467
Query: 184 IKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM 243
I G C + EA ++++ M +G + + +I+ K K D+A ++ M + +
Sbjct: 468 IDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGL 527
Query: 244 DDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
+ TY ++ CK+G I +A +LE M G E D +T ++I GL GR + A
Sbjct: 528 QPNNI-TYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVAL 586
Query: 304 KVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
KV+ + +P Y+ +++ L R R+A +FREM + G P TY ++ +G
Sbjct: 587 KVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRG 645
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 99/443 (22%), Positives = 181/443 (40%), Gaps = 91/443 (20%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKT-FKIALMTLAE 120
Y++ + +TFN ++ + ++ + L+EM R + D+T F + E
Sbjct: 169 YSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVE 228
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIA 179
++ + M + GC + +N ++ C+ V +A Y+ ++++ +P++I
Sbjct: 229 EGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQIT 288
Query: 180 YGWLIKGYC----------------------DV-------------GDLIEASKIWNLMT 204
Y + G C DV G L EA I N M
Sbjct: 289 YNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMV 348
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK----------------------- 241
D G P I + +I N+ +EA+ + + + VK
Sbjct: 349 DRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPH 408
Query: 242 -------RMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
M + G + TY +ID +C GK+ +A +L++M G +T ++II
Sbjct: 409 LALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTII 468
Query: 291 YGLLARGRLREAYKVVEEIEKPDIS----LYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
GL + R+ EA +V ++++ IS ++ LI GL + ++ +A ++ +MI G +
Sbjct: 469 DGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQ 528
Query: 347 PTMHTYIMLLQGHLGKRG--RKGPDPL------------VNFDTIFVGGLVKAGKSLDAA 392
P TY +L H K+G +K D L V + T+ + GL KAG++ A
Sbjct: 529 PNNITYNSILT-HYCKQGDIKKAADILETMTANGFEVDVVTYGTL-INGLCKAGRTQVAL 586
Query: 393 KYVERVMNRGVEVPRFDYNKFLH 415
K + + +G+ YN L
Sbjct: 587 KVLRGMRIKGMRPTPKAYNPVLQ 609
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 131/292 (44%), Gaps = 8/292 (2%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIM 134
TFN +++ + K + L +EM D+ T+ + L + +L K ++ M
Sbjct: 393 TFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM 452
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDL 193
GC S N ++ LC++ + EA+ + ++ + I N I + LI G C +
Sbjct: 453 ESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKI 512
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
+A ++ N M EG +P+ + ++ + K +A + + M + + + TY
Sbjct: 513 DDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFE-VDVVTYGT 571
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI---- 309
+I+ +CK G+ A +L M +G+ + ++ L R +R+A + E+
Sbjct: 572 LINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVG 631
Query: 310 EKPDISLYHGLIKGLLRLRRA-REATQVFREMIKRGCEPTMHTYIMLLQGHL 360
E PD Y + +GL R +EA EM+ +G P ++ ML +G L
Sbjct: 632 EPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLL 683
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 80/183 (43%), Gaps = 30/183 (16%)
Query: 271 LEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLR 326
L+ +F GI+AD + + ++ L+ +++ V E+ KPD+ ++ L+K L R
Sbjct: 136 LQPLF--GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCR 193
Query: 327 LRRAREATQVFREMIKRGCEPTMHTYIMLLQG---------------HLGKRGRKGPDPL 371
+ R A + EM RG P T+ L+QG + + G
Sbjct: 194 AHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVT 253
Query: 372 VNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGK 431
VN + + G K G+ DA Y+++ + G E + YN F++ G+ + VG
Sbjct: 254 VN---VLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVN------GLCQNDHVGH 304
Query: 432 KLR 434
L+
Sbjct: 305 ALK 307
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 174/397 (43%), Gaps = 52/397 (13%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIM 134
T++ +++ K R D + L EM R +N T+ + + L +++ F M
Sbjct: 246 TYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDM 305
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDL 193
D G ++ LC+ + EAK L+ ++S +KPN + Y LI G+ G+
Sbjct: 306 EDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNA 365
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMR------------- 239
EA K+ M G +P+ D ++ K+ + D A + QM+R
Sbjct: 366 DEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLI 425
Query: 240 ----------------VKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGI 279
+ M++ G+S TY I+I +C+ G+ +A +LEEM +G+
Sbjct: 426 IEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGL 485
Query: 280 EADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQ 335
+ + + +I G G + A ++ +++ K PD+ Y+ LI GL ++ R E+T+
Sbjct: 486 KPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTK 545
Query: 336 VFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVN---------FDTIFVGGLVKAG 386
F +M +RG P TY L+ G+L + + LV D I++ L
Sbjct: 546 YFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYF 605
Query: 387 KSLDAAKY---VERVMNRGVEVPRFDYNKFLHYYSNE 420
KS D K + ++++GV + Y +H S+
Sbjct: 606 KSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSS 642
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 127/299 (42%), Gaps = 54/299 (18%)
Query: 198 KIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDW 257
K+ M G P + +IE + K+ + D A KV MR +R L TY ++I
Sbjct: 230 KVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMR-ERGCGLNTVTYNVLIAG 288
Query: 258 MCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPD 313
+C+ G + +A+ ++M G+ D T ++I GL R EA +++E+ KP+
Sbjct: 289 LCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPN 348
Query: 314 ISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT------------------------- 348
+ +Y LI G +R A EA ++ +EM+ G +P
Sbjct: 349 VVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLK 408
Query: 349 ----------MHTYIMLLQGHLGKRGRK------------GPDPLVNFDTIFVGGLVKAG 386
TY ++++GH +K G P V +I + GL ++G
Sbjct: 409 QMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSG 468
Query: 387 KSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLADIF 445
+ A+ +E + +G++ F Y + Y E V + E+ K+ +V + L D++
Sbjct: 469 EPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNV--LPDLY 525
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 127/297 (42%), Gaps = 17/297 (5%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRE--LKKMVNF 130
N T++ M+ + +S + + L+EM + L F A + RE +
Sbjct: 453 NVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGL-KPNAFVYAPLISGYCREGNVSLACEI 511
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCD 189
F M L N ++ L + V E+ KY + PNE Y LI GY
Sbjct: 512 FDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLK 571
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL- 248
GDL A ++ M D G +P+ + ++E++FK + ++ F K M D G+
Sbjct: 572 NGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTF-----KSMLDQGVM 626
Query: 249 ---STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
Y I+I + G + A+ +L + K G D SS+I GL +A+ +
Sbjct: 627 LDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGI 686
Query: 306 VEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
++E+ K P+I Y+ LI GL + A VF ++ +G P TY L+ G
Sbjct: 687 LDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDG 743
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 123/273 (45%), Gaps = 16/273 (5%)
Query: 77 FNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVNFFHIMN 135
+ ++ + S N++ + L + + V D +L++ L + + +K M+
Sbjct: 632 YGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMS 691
Query: 136 DCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGDLI 194
G + ++ N ++ LC+ + A+ + L++ + PN + Y LI G C VGD+
Sbjct: 692 KKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDIS 751
Query: 195 EASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIV 254
A ++N M G P V + ++AM + + M ++ +S++ +
Sbjct: 752 NAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLR--GHASISSFNNL 809
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDI 314
+D CKRGK+ + +L + RG+ + LT+ +II GL G+L E + + E+++
Sbjct: 810 VDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTS 869
Query: 315 SLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
AR + +F +MI +G P
Sbjct: 870 E------------SAARHFSSLFMDMINQGKIP 890
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 113/258 (43%), Gaps = 24/258 (9%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N +T+ ++D K +I + EM + D + + + +L++ +
Sbjct: 733 NCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLI 792
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDV 190
M G S+ N +V C+R + E K L + + + PN + +I G +
Sbjct: 793 EEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEA 851
Query: 191 GDLIEA-------------------SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEA 231
G L E S ++ M ++G P +DVVD MI K D+A
Sbjct: 852 GKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIP-LDVVDDMIRDHCKEGNLDKA 910
Query: 232 MKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
+ + ++ V + +G S+Y ++D +C++GK+S+A +L+EM KRGI ++
Sbjct: 911 LMLRDVI-VAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGICPSENQCLILLT 969
Query: 292 GLLARGRLREAYKVVEEI 309
L G ++E V++ +
Sbjct: 970 NLHTSGYIQEHNTVLDNM 987
>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Vitis vinifera]
Length = 539
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 146/311 (46%), Gaps = 9/311 (2%)
Query: 53 WRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFK 112
W+ V K++ N ++ N +VD + K + + + M + + D
Sbjct: 212 WKHVTTLLNEMVKSK--IMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTY 269
Query: 113 IALMTLAEVR-ELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS- 170
ALM +R E+ + V F +M GC ++ N ++ C+ + + +A YL ++
Sbjct: 270 AALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCR 329
Query: 171 EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDE 230
+ + PN + Y LI G C VG L +A ++N M G P++ +++ K ++ E
Sbjct: 330 QELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAE 389
Query: 231 AMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
AM + + + +D + Y I ID MC+ G + A + + RG++ D T + +I
Sbjct: 390 AMALLKAIEGSNLDP-DVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMI 448
Query: 291 YGLLARGRLREAYKVVEEIEKPDI----SLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
GL RG L EA K+ E+++ Y+ + +GLL+ + A Q+ EM+ RG
Sbjct: 449 RGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFS 508
Query: 347 PTMHTYIMLLQ 357
+ T +L++
Sbjct: 509 ADVSTTALLVK 519
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 159/346 (45%), Gaps = 29/346 (8%)
Query: 76 TFNRMVDIIGK-SRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIM 134
T R + ++GK +D+F + + E + +V T+ + L + R+L + +N F M
Sbjct: 131 TLVRGLCVVGKIGEALDVFDKMVGEGFQPNVV---TYGTLMNGLCKDRQLTEALNLFSEM 187
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIK----PNEIAYGWLIKGYCDV 190
G + N ++ LC + E K++ L+E +K PN ++ ++ C
Sbjct: 188 IAKGISPDIFTYNSLIHALCN---LCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKE 244
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G + EA + ++M G EP + +++ ++ DEA+KVF MM V+ + +
Sbjct: 245 GKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMM-VRNGCVCNVVS 303
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI- 309
Y +I+ CK +I +A + EEM ++ + + +T S++I+GL GRL++A + E+
Sbjct: 304 YNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMV 363
Query: 310 ---EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------- 359
+ P++ Y L+ L + R EA + + + +P + Y + + G
Sbjct: 364 ACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLE 423
Query: 360 -----LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMN 400
+G P V I + GL K G LD A + R M+
Sbjct: 424 AARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGL-LDEASKLFREMD 468
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 148/331 (44%), Gaps = 40/331 (12%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMV 128
F N +T+ +++ + K R + EM + + D T+ + L + E K +
Sbjct: 157 FQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVT 216
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGY 187
+ M ++ LN VV LC+ V EA ++ + + ++P+ + Y L+ G+
Sbjct: 217 TLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGH 276
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM--------- 238
C ++ EA K++++M G ++ + +I + KI + D+AM +F+ M
Sbjct: 277 CLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNT 336
Query: 239 -----------RVKRMDDL--------------GLSTYRIVIDWMCKRGKISQAYTMLEE 273
V R+ D L TY I++D++CK ++++A +L+
Sbjct: 337 MTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKA 396
Query: 274 MFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRR 329
+ ++ D + I G+ G L A + + +PD+ ++ +I+GL +
Sbjct: 397 IEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGL 456
Query: 330 AREATQVFREMIKRGCEPTMHTYIMLLQGHL 360
EA+++FREM + GC TY + QG L
Sbjct: 457 LDEASKLFREMDENGCLRNGCTYNTITQGLL 487
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 123/258 (47%), Gaps = 14/258 (5%)
Query: 111 FKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRK-----LVVEAKYL 165
F L ++A+++ +++ M+ G + L V+ + C L V AK
Sbjct: 59 FAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAK-- 116
Query: 166 ILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI 225
ILKL +P+ + L++G C VG + EA +++ M EGF+P++ ++ K
Sbjct: 117 ILKLGH--QPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKD 174
Query: 226 NKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
+ EA+ +F M K + + TY +I +C + T+L EM K I + ++
Sbjct: 175 RQLTEALNLFSEMIAKGISP-DIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVS 233
Query: 286 LSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMI 341
L+ ++ L G++ EA+ VV+ + +PD+ Y L+ G EA +VF M+
Sbjct: 234 LNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMV 293
Query: 342 KRGCEPTMHTYIMLLQGH 359
+ GC + +Y L+ G+
Sbjct: 294 RNGCVCNVVSYNTLINGY 311
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 65/159 (40%), Gaps = 27/159 (16%)
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGL 320
S ++ ++M GI D TL+ +I R+ A V+ +I K PD + + L
Sbjct: 73 STVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTL 132
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVG 380
++GL + + EA VF +M+ G +P + TY L+ G
Sbjct: 133 VRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNG---------------------- 170
Query: 381 GLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN 419
L K + +A ++ +G+ F YN +H N
Sbjct: 171 -LCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCN 208
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 137/279 (49%), Gaps = 13/279 (4%)
Query: 75 ITFNRMVDIIGKSRNI---DLFWETLQEMG-RRRLVNDKTFKIALMTLAEVRELKKMVNF 130
+TF+ ++DI K N+ +T+ EMG ++ + EV E +K+
Sbjct: 302 VTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKL--- 358
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCD 189
F +M GC+ + + ++ C K + EAK L ++ + + PN ++Y LI +C
Sbjct: 359 FDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQ 418
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
+G L EA +++ M G+ P + ++E F K +A ++F+ M+ + L
Sbjct: 419 LGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKP-NLV 477
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
Y I+ID MCK G ++ A + E+F G++ D ++II GL G L EA + ++
Sbjct: 478 MYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKM 537
Query: 310 EK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
E+ P+ Y+ +I+G L+ + A Q+ EM +G
Sbjct: 538 EEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKG 576
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 155/352 (44%), Gaps = 27/352 (7%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHI 133
ITF +++ + K+ E +M R D T+ + L ++ E
Sbjct: 162 ITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKK 221
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGD 192
M + GC+ + + ++ +LC+ +LV EA + + ++ I P ++Y LI+G C
Sbjct: 222 MGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSR 281
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS--- 249
EAS + N MT P I +I+ F K EA V +K M ++G+
Sbjct: 282 WKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGV-----LKTMTEMGVEPNV 336
Query: 250 -TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY ++ + ++ +A + + M RG + D + S +I G R+ EA ++ E
Sbjct: 337 ITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNE 396
Query: 309 I----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL-----QGH 359
+ P+ Y LI +L + REA ++F++M G P + TY +LL QG+
Sbjct: 397 MIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGY 456
Query: 360 LGK-----RGRKGP--DPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVE 404
LGK R +G P + TI + + K+G A K + G++
Sbjct: 457 LGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQ 508
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 105/238 (44%), Gaps = 25/238 (10%)
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRG 262
G P+ ++ +I F + D V + ++ LGL T+ +I+ +CK G
Sbjct: 121 GLSPNTCTLNILINCFCLMQHVDLGFSV-----LAKVIKLGLQPTIITFTTLINGLCKAG 175
Query: 263 KISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYH 318
+ +QA + ++M RG + D T ++II GL G A +++++ +PD+ Y
Sbjct: 176 EFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYS 235
Query: 319 GLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDT-- 376
LI L + R EA +F M +G PT+ +Y L+QG K ++N T
Sbjct: 236 TLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSL 295
Query: 377 ----------IFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVV 424
+ + K G L+A ++ + GVE YN +H YS + VV
Sbjct: 296 NIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVV 353
Score = 45.1 bits (105), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 64/150 (42%), Gaps = 27/150 (18%)
Query: 269 TMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGL 324
++ ++M G+ + TL+ +I + + V+ ++ K P I + LI GL
Sbjct: 112 SLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGL 171
Query: 325 LRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVK 384
+ +A ++F +M+ RGC+P ++TY T + GL K
Sbjct: 172 CKAGEFAQALELFDDMVARGCQPDVYTY-----------------------TTIINGLCK 208
Query: 385 AGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
G++ AA ++++ G + Y+ +
Sbjct: 209 MGETAAAAGLIKKMGEVGCQPDVVTYSTLI 238
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/443 (23%), Positives = 199/443 (44%), Gaps = 55/443 (12%)
Query: 13 TILYQQQYSPESRLHSSLSSCN-----FNLTHEFFLQICNNFPLSWRPVYL----FFQYT 63
+++YQ L SLS CN L E FL C ++ V L F +
Sbjct: 252 SVIYQT-------LIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRIN 304
Query: 64 QKAQPC-------FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALM 116
+ A+ FA + IT+ +++ + K +D + + + +V T +
Sbjct: 305 EAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFV 364
Query: 117 TLAEVRE----LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SE 171
T + + L MV + I+ D C Y N ++ + LV A ++ + ++
Sbjct: 365 THGRLDDAKAVLSDMVTSYGIVPDV-CTY-----NSLIYGYWKEGLVGLALEVLHDMRNK 418
Query: 172 WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEA 231
KPN +Y L+ G+C +G + EA + N M+ +G +P+ + +I F K ++ EA
Sbjct: 419 GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEA 478
Query: 232 MKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
+++F+ M K + T+ +I +C+ +I A +L +M G+ A+ +T +++I
Sbjct: 479 VEIFREMPRKGCKP-DVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLIN 537
Query: 292 GLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
L RG ++EA K+V E+ D Y+ LIKGL R +A +F +M++ G P
Sbjct: 538 AFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAP 597
Query: 348 TMHTYIMLLQGHLGKRGR-------------KGPDP-LVNFDTIFVGGLVKAGKSLDAAK 393
+ + +L+ G L + G +G P +V F+++ + GL +AG+ D
Sbjct: 598 SNISCNILING-LCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSL-INGLCRAGRIEDGLT 655
Query: 394 YVERVMNRGVEVPRFDYNKFLHY 416
++ G+ +N + +
Sbjct: 656 MFRKLQAEGIPPDTVTFNTLMSW 678
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 134/289 (46%), Gaps = 10/289 (3%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHIM 134
TF ++ ID L++M + V N ++ + +L++ + + + M
Sbjct: 219 TFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEM 278
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGDL 193
GC E N V+ LC+ + EA ++ + L P++I YG+L+ G C +G +
Sbjct: 279 FLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRV 338
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
A ++ + +P I + + +I F + D+A V M + TY
Sbjct: 339 DAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNS 394
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE--- 310
+I K G + A +L +M +G + + + + ++ G G++ EAY V+ E+
Sbjct: 395 LIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADG 454
Query: 311 -KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
KP+ ++ LI + R EA ++FREM ++GC+P ++T+ L+ G
Sbjct: 455 LKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISG 503
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 142/316 (44%), Gaps = 27/316 (8%)
Query: 139 CEYSLEMLNKVVKTL----CQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLI 194
CE + + N V++ L C + V A LS I P +G ++K +C V ++
Sbjct: 178 CEPTFKSYNVVLEILVSGNCHK---VAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEID 234
Query: 195 EASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ-MMRVKRMDDLGLSTYRI 253
A + MT G P+ + +I + K N+ +EA+++ + M + + D T+
Sbjct: 235 SALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDA--ETFND 292
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPD 313
VI +CK +I++A M+ M RG D++T ++ GL GR+ A + I KP+
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPE 352
Query: 314 ISLYHGLIKGLLRLRRAREATQVFREMIKR-GCEPTMHTYIMLLQGH------------L 360
I +++ LI G + R +A V +M+ G P + TY L+ G+ L
Sbjct: 353 IVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVL 412
Query: 361 GKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE 420
KG P V TI V G K GK +A + + G++ +N + + E
Sbjct: 413 HDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKE 472
Query: 421 ----EGVVMFEEVGKK 432
E V +F E+ +K
Sbjct: 473 HRIPEAVEIFREMPRK 488
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 111/238 (46%), Gaps = 3/238 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFF 131
N++ FN ++ K I E +EM R+ D TF + L EV E+K +
Sbjct: 458 NTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLL 517
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKP-NEIAYGWLIKGYCDV 190
M G + N ++ +R + EA+ L+ ++ P +EI Y LIKG C
Sbjct: 518 RDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRA 577
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G++ +A ++ M +G PS + +I + +EA++ FQ V R + T
Sbjct: 578 GEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVE-FQKEMVLRGSTPDIVT 636
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
+ +I+ +C+ G+I TM ++ GI D +T ++++ L G + +A +++E
Sbjct: 637 FNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDE 694
>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
Length = 641
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 142/302 (47%), Gaps = 11/302 (3%)
Query: 63 TQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEV 121
K QP + T+ ++D + K+ ID L EM TF + + L +
Sbjct: 197 VSKCQP----DVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKK 252
Query: 122 RELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAY 180
+L ++ M GC + N ++ LC + + +A L+ ++ S PN + Y
Sbjct: 253 GDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTY 312
Query: 181 GWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
G +I G G ++ +++ LM + G+ + V +I FK K EAM++F+ M V
Sbjct: 313 GTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTV 372
Query: 241 KRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
K +L Y VID +C+ GK +A +L EM + + T SS++ G G
Sbjct: 373 KEC-ELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGH 431
Query: 301 EAYKVVEEIEKPDIS----LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
+A ++ +++ K + + Y LI GL + + +EA V+ +M+ +GC+P + Y ++
Sbjct: 432 KAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMI 491
Query: 357 QG 358
G
Sbjct: 492 NG 493
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 144/300 (48%), Gaps = 12/300 (4%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIM 134
TF ++D + + L M +R+V +K F + + +K V F M
Sbjct: 62 TFYSLIDNYANLGDFKSLEKVLDRMRCEKRVVVEKCFVVIFKAYGKAHLPEKAVGLFDRM 121
Query: 135 N-DCGCEYSLEMLNKVVKTLCQRKLVVEA----KYLILKLSEWIKPNEIAYGWLIKGYCD 189
+ C+ +++ N V+ + Q L A ++I I PN + + +IK C
Sbjct: 122 AYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVLTFNLVIKTMCK 181
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
VG + +A +++ M +P + +++ K ++ DEA+ + M++ +
Sbjct: 182 VGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPV- 240
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
T+ ++I+ +CK+G +++ +++ MF +G + +T +++I+GL +G+L +A +++ +
Sbjct: 241 TFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRM 300
Query: 310 EK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
P++ Y +I GL++ RA + +V M +RG + Y L+ G L K G+
Sbjct: 301 VSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISG-LFKEGK 359
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 87/183 (47%), Gaps = 11/183 (6%)
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
NE+ Y LI G C G + EA +W M +G +P + MI ++A++++
Sbjct: 448 NEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLY 507
Query: 236 QMMRVKRMDDL-GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
M + D + TY I+++ +CK+ IS+A +L M RG + D +T II+
Sbjct: 508 NEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVT--CIIFLRT 565
Query: 295 ARGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIM 354
R +L E ++ GL+ LL+ +R A+++ M+++ P T+
Sbjct: 566 LREKLDPPQDGREFLD--------GLVVRLLKRQRVLGASKIVEVMLQKLLPPKPSTWTR 617
Query: 355 LLQ 357
+++
Sbjct: 618 VVE 620
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 18/119 (15%)
Query: 312 PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKG---- 367
P++ ++ +IK + ++ +A Q+FR+M C+P ++TY L+ G L K R
Sbjct: 167 PNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDG-LCKADRIDEAVS 225
Query: 368 -----------PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
P P V F+ + + GL K G AK V+ + +G YN +H
Sbjct: 226 LLDEMQIDGCFPSP-VTFN-VLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIH 282
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 146/328 (44%), Gaps = 39/328 (11%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+ + ++D + K R + + +M + + D T+ + +L + E K + +
Sbjct: 210 VVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQ 269
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGD 192
M + + + + VV LC+ + EA ++ + + ++PN + Y L+ G+C +
Sbjct: 270 MINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSE 329
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM-------------- 238
+ EA K+++ M G+ P++ + +I + KI + D+A +F+ M
Sbjct: 330 MDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNT 389
Query: 239 -----RVKRMDDL--------------GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGI 279
V R+ D L+TYRI++D++CK+ + +A +L+ + +
Sbjct: 390 LMHXCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNM 449
Query: 280 EADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQ 335
+ D + +I G+ G L A + + +P++ Y +I GL R EA +
Sbjct: 450 DPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANK 509
Query: 336 VFREMIKRGCEPTMHTYIMLLQGHLGKR 363
+F EM GC P TY + QG L +
Sbjct: 510 LFMEMDGNGCSPDGCTYNTITQGLLQNK 537
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 147/333 (44%), Gaps = 45/333 (13%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
+++ FNR++ I K++ + +M + D T I + + + L +
Sbjct: 68 STVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVL 127
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
+ G + +++ LC + +A +L K+ E +PN + YG LI G C V
Sbjct: 128 AKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKV 187
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF--------------- 235
G+ A ++ M +P + V +I++ K + EA +F
Sbjct: 188 GNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTY 247
Query: 236 ---------------------QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEM 274
QM+ K M D+ + + V+D +CK GKI++A+ +++ M
Sbjct: 248 TSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVI--FSTVVDALCKEGKITEAHDVVDMM 305
Query: 275 FKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRA 330
RG+E + +T ++++ G + + EA KV + + P++ Y+ LI G +++R
Sbjct: 306 IIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRM 365
Query: 331 REATQVFREMIKRGCEPTMHTYIMLLQG-HLGK 362
+AT +F EM ++ P TY L+ H+G+
Sbjct: 366 DKATYLFEEMCQKELIPNTVTYNTLMHXCHVGR 398
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 139/289 (48%), Gaps = 8/289 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVR-ELKKMVNFFHI 133
+ F+ +VD + K I + + M R + + ALM ++ E+ + V F
Sbjct: 280 VIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDT 339
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M G ++ N ++ C+ + + +A YL ++ + + PN + Y L+ C VG
Sbjct: 340 MVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHVGR 398
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
L +A +++ M G P + +++ K + DEAM + + + MD + Y
Sbjct: 399 LQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDP-DIQIYT 457
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
IVID MC+ G++ A + + +G+ + T + +I GL RG L EA K+ E++
Sbjct: 458 IVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGN 517
Query: 311 --KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
PD Y+ + +GLL+ + A A Q+ +EM+ RG + T +L++
Sbjct: 518 GCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVE 566
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 125/278 (44%), Gaps = 27/278 (9%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+ + + L+ + N M G P + ++ +I +F +N+ A V
Sbjct: 67 PSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSV 126
Query: 235 F-QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
+++++ D +T+ +I +C GKI A + ++M G + + +T ++I GL
Sbjct: 127 LAKILKLGHQPDT--ATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGL 184
Query: 294 LARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
G A +++ +E+ PD+ +Y +I L + R+ EA +F +M+ +G P +
Sbjct: 185 CKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDI 244
Query: 350 HTYIMLLQG--------HLGK------RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYV 395
TY L+ H+ + PD +V F T+ V L K GK +A V
Sbjct: 245 FTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPD-VVIFSTV-VDALCKEGKITEAHDVV 302
Query: 396 ERVMNRGVEVPRFDYNKFL--HYYSNE--EGVVMFEEV 429
+ ++ RGVE YN + H +E E V +F+ +
Sbjct: 303 DMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTM 340
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 111/242 (45%), Gaps = 11/242 (4%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
+A N I++N +++ K + +D +EM ++ L+ + LM V L+ +
Sbjct: 345 YAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXCHVGRLQDAIA 404
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYC 188
FH M G L ++ LC++ + EA L+ + + P+ Y +I G C
Sbjct: 405 LFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMC 464
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
G+L A I++ ++ +G P++ MI + DEA K+F MD G
Sbjct: 465 RAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFM-----EMDGNGC 519
Query: 249 S----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK 304
S TY + + + + +A +L+EM RG AD ++ ++++ +L +L ++ K
Sbjct: 520 SPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSAD-VSTTTLLVEMLCDDKLDQSVK 578
Query: 305 VV 306
+
Sbjct: 579 QI 580
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 139/279 (49%), Gaps = 7/279 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHI 133
+T+N +++ + K + + E EM R + D TF + ++ + K V F +
Sbjct: 465 VTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEM 524
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGD 192
M + + N ++ C+ + + L + S I PN I+YG LI GYC++G
Sbjct: 525 MIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGC 584
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ EA ++W+ M ++GFE +I + +++ + + +A + M +K + G+ TY
Sbjct: 585 VSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGI-TYN 643
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA----YKVVEE 308
+I+ K + +A+ ++ +M G+ D +T + I+ G +GR++EA K++E
Sbjct: 644 TLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIER 703
Query: 309 IEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
PD S Y LI G + +EA +V EM++RG P
Sbjct: 704 GVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVP 742
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/436 (20%), Positives = 176/436 (40%), Gaps = 87/436 (19%)
Query: 90 IDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNK 148
+DL WE QE+ R + VN T I + L + ++++ +F M + G + N
Sbjct: 235 VDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNT 294
Query: 149 VVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVG---------------- 191
++ C++ L+ EA L+ +S + +KP Y +I G C G
Sbjct: 295 LINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIG 354
Query: 192 -------------------DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
++++A +I++ M +G P + +I K D+A+
Sbjct: 355 MSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQAL 414
Query: 233 KVFQMMR---------------------------VKRMDD-------LGLSTYRIVIDWM 258
K F+ M+ +K D+ L + TY +++ +
Sbjct: 415 KYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGL 474
Query: 259 CKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDI 314
CK +S+A + EM +RG+ D T +++I G G + +A + E + KPD+
Sbjct: 475 CKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDV 534
Query: 315 SLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG------------K 362
Y+ LI G + + +++ +MI R P +Y +L+ G+ +
Sbjct: 535 VTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDE 594
Query: 363 RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEG 422
KG + + V G +AG ++ A +++ ++ +G+ YN ++ + EE
Sbjct: 595 MVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEEN 654
Query: 423 VVMFEEVGKKLREVGL 438
+ + K+ GL
Sbjct: 655 MDRAFALVNKMENSGL 670
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/403 (22%), Positives = 178/403 (44%), Gaps = 47/403 (11%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTL 118
F P F H+ +F+ M+ I+ +SR RL + + + ++
Sbjct: 117 FIDSITSNCPNFKHSLQSFSAMIHILVRSR---------------RLPDAQAVILRMVRK 161
Query: 119 AEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA--KYLILKLSEWIKPN 176
+ V ++ + + +CG + + +V+T Q + + E + +LK S+ + +
Sbjct: 162 SGVSRVEIVESLVLTYGNCGSNPLV--FDLLVRTYVQARKLREGCEAFRVLK-SKGLCVS 218
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
A L+ G VG + A +I+ + G + ++ ++ MI K N+ E K F
Sbjct: 219 INACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCK-NQKIENTKSF- 276
Query: 237 MMRVKRMDDLGL----STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
+ M++ G+ TY +I+ C++G + +A+ +++ M +G++ T ++II G
Sbjct: 277 ---LSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIING 333
Query: 293 LLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
L G+ A V++E+ K PD + Y+ L+ R +A ++F EM +G P
Sbjct: 334 LCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPD 393
Query: 349 MHTYIMLLQGHLGKRG-------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYV 395
+ ++ L+ G L K G G P TI +GG + G +A K
Sbjct: 394 LVSFSALI-GLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVR 452
Query: 396 ERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
+ ++ +G + YN L+ E+ + +E+ ++ E G+
Sbjct: 453 DEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGV 495
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 99/211 (46%), Gaps = 3/211 (1%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHI 133
+T+N ++D K ++ E +M RR+ N ++ I + + + + +
Sbjct: 535 VTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDE 594
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDVGD 192
M + G E ++ N +VK C+ V+A ++L L + I P+ I Y LI G+ +
Sbjct: 595 MVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEEN 654
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ A + N M + G P + + ++ F + + EA ++ + ++R + STY
Sbjct: 655 MDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEA-ELIMLKMIERGVNPDRSTYT 713
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADN 283
+I+ + + +A+ + +EM +RG D+
Sbjct: 714 SLINGHVTQNNLKEAFRVHDEMLQRGFVPDD 744
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 171/380 (45%), Gaps = 35/380 (9%)
Query: 70 FAHNSITFNRMVDII---GKSRNIDLFWETLQEMGRR-RLVNDKTFKIALMTLAEVRE-- 123
+ N+ITF+ +++ + G+ + + EMG + L+ T L + E
Sbjct: 252 YEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAM 311
Query: 124 --LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAY 180
+ KMV + GC+ + V+ +C+ A L+ K+ E IK + + Y
Sbjct: 312 LLIDKMVEY-------GCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY 364
Query: 181 GWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
+I G C G L A ++N M +G +I + +I F + D+ K+ + M +
Sbjct: 365 SIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDM-I 423
Query: 241 KRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
KR + + T+ ++ID K GK+ +A + +EM RGI D +T +S+I G L
Sbjct: 424 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 483
Query: 301 EAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
+A ++V+ + P+I ++ LI G + R + ++FR+M RG TY L+
Sbjct: 484 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 543
Query: 357 QG--HLGKR-----------GRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
QG LGK RK P +V + I + GL G+S A + E++ +
Sbjct: 544 QGFCELGKLNVAKELFQEMVSRKVPPNIVTY-KILLDGLCDNGESEKALEIFEKIEKSKM 602
Query: 404 EVPRFDYNKFLHYYSNEEGV 423
E+ YN +H N V
Sbjct: 603 ELDIGIYNIIIHGMCNASKV 622
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 158/393 (40%), Gaps = 83/393 (21%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIM 134
I F+R+ I K++ DL +AL E++ + + IM
Sbjct: 187 IDFSRLFSAIAKTKQYDLV-------------------LALCKQMELKGIAHNLYTLSIM 227
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLI 194
+C C + LC L A I+KL +PN I + LI G C G +
Sbjct: 228 INCFCR---------CRKLC---LAFSAMGKIIKLG--YEPNTITFSTLINGLCLEGRVS 273
Query: 195 EASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM---------------------- 232
EA ++ + M + G +P + ++ ++ K+ EAM
Sbjct: 274 EALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVL 333
Query: 233 --------KVFQMMRVKRMDD----LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIE 280
M +++M++ L Y I+ID +CK G + A+ + EM +GI
Sbjct: 334 NVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGIT 393
Query: 281 ADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQV 336
+ +T + +I G GR + K++ ++ K P++ + LI ++ + REA ++
Sbjct: 394 TNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEEL 453
Query: 337 FREMIKRGCEPTMHTYIMLLQG-----HLGKRGR-------KGPDPLVNFDTIFVGGLVK 384
+EMI RG P TY L+ G HL K + KG DP + I + G K
Sbjct: 454 HKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCK 513
Query: 385 AGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
A + D + ++ RGV YN + +
Sbjct: 514 ANRIDDGLELFRKMSLRGVVADTVTYNTLIQGF 546
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 167/386 (43%), Gaps = 21/386 (5%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKT-FKIALMTLAEVRELKKMVNFF 131
N++T+ +++++ KS L E L++M R + D + I + L + L N F
Sbjct: 325 NAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLF 384
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQR-KLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDV 190
+ M G ++ N ++ C + AK L + I PN + + LI +
Sbjct: 385 NEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKE 444
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G L EA ++ M G P +I+ F K N D+A ++ +M V + D + T
Sbjct: 445 GKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM-VSKGCDPNIRT 503
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
+ I+I+ CK +I + +M RG+ AD +T +++I G G+L A ++ +E+
Sbjct: 504 FNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMV 563
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR--- 363
P+I Y L+ GL + +A ++F ++ K E + Y +++ G
Sbjct: 564 SRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVD 623
Query: 364 ---------GRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPR-FDYNKF 413
KG P V I +GGL K G L A+ + R M P + YN
Sbjct: 624 DAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKG-PLSEAELLFRKMEEDGHAPDGWTYNIL 682
Query: 414 LHYYSNEEGVVMFEEVGKKLREVGLA 439
+ + + ++ ++L+ G +
Sbjct: 683 IRAHLGDGDATKSVKLIEELKRCGFS 708
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 120/255 (47%), Gaps = 3/255 (1%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMV 128
A ++IT+ ++D K ++D + + M + N +TF I + + + +
Sbjct: 462 IAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGL 521
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGY 187
F M+ G N +++ C+ + AK L ++ S + PN + Y L+ G
Sbjct: 522 ELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGL 581
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
CD G+ +A +I+ + E I + + +I +K D+A +F + +K + G
Sbjct: 582 CDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP-G 640
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
+ TY I+I +CK+G +S+A + +M + G D T + +I L G ++ K++E
Sbjct: 641 VKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIE 700
Query: 308 EIEKPDISLYHGLIK 322
E+++ S+ IK
Sbjct: 701 ELKRCGFSVDASTIK 715
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 125/282 (44%), Gaps = 27/282 (9%)
Query: 210 PSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYT 269
P++ ++ K + D + + + M +K + L T I+I+ C+ K+ A++
Sbjct: 184 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAH-NLYTLSIMINCFCRCRKLCLAFS 242
Query: 270 MLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLL 325
+ ++ K G E + +T S++I GL GR+ EA ++V+ + KPD+ + L+ GL
Sbjct: 243 AMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLC 302
Query: 326 RLRRAREATQVFREMIKRGCEPTMHTY-----IMLLQGHLG---KRGRKGPDPLVNFD-- 375
+ EA + +M++ GC+P TY +M G + RK + + D
Sbjct: 303 LSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAV 362
Query: 376 --TIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN----EEGVVMFEEV 429
+I + GL K G +A + +G+ YN + + N ++G + ++
Sbjct: 363 KYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDM 422
Query: 430 GKK---LREVGLADLADIFQRYGKKMATRERRR---NRAIEP 465
K+ V + L D F + GK E + +R I P
Sbjct: 423 IKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP 464
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 128/281 (45%), Gaps = 35/281 (12%)
Query: 139 CEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASK 198
C Y N ++K LC V +A+ L +++ P+ + YG LI GYC +G+L A K
Sbjct: 263 CSY-----NILLKVLCGAGRVEDARQLFDEMAS--PPDVVTYGILIHGYCALGELENAVK 315
Query: 199 IWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWM 258
+ + M G EP+ V ++ + +A+ V + M V L + Y V+
Sbjct: 316 LLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDM-VHHKVILDEAVYTTVLSGF 374
Query: 259 CKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI--EKPDIS- 315
C +G + A +EM ++G+ D +T +++I GL G L+EA KV++E+ + D+
Sbjct: 375 CNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDE 434
Query: 316 -LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNF 374
Y L+ G + + EA QV M++RG P + TY
Sbjct: 435 VTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTY---------------------- 472
Query: 375 DTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
T GL K G A + + + N+G+E+ YN ++
Sbjct: 473 -TALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLIN 512
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 130/280 (46%), Gaps = 15/280 (5%)
Query: 97 LQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQ 155
EM R+ L D T+ + L ELK+ M + +V C+
Sbjct: 387 FDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCK 446
Query: 156 RKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDV 214
R + EA + + + PN + Y L G C GD+ A+++ + M+++G E +
Sbjct: 447 RGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACT 506
Query: 215 VDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTM 270
+ +I K D+AM+ + MD GL TY +ID +CK G++ +A+ +
Sbjct: 507 YNSLINGLCKAGYLDQAMRT-----MADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDL 561
Query: 271 LEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE-EIEK---PDISLYHGLIKGLLR 326
L+EM GI+ +T + ++ G GR+ K++E +EK P+ + Y+ L+K
Sbjct: 562 LQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCI 621
Query: 327 LRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK 366
+ T++++ M R EP +TY +L++GH R K
Sbjct: 622 GNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMK 661
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 138/325 (42%), Gaps = 41/325 (12%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
N ++N ++ ++ + ++ + EM V T+ I + + EL+ V
Sbjct: 261 NVCSYNILLKVLCGAGRVEDARQLFDEMASPPDV--VTYGILIHGYCALGELENAVKLLD 318
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVG 191
M G E + + VV LC + V +A ++ + + +E Y ++ G+C+ G
Sbjct: 319 DMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKG 378
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD------- 244
DL+ A + ++ M +G +I + + EA KV Q M +R+D
Sbjct: 379 DLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYT 438
Query: 245 ---------------------------DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKR 277
+ TY + D +CK+G + A +L EM +
Sbjct: 439 VLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNK 498
Query: 278 GIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREA 333
G+E + T +S+I GL G L +A + + +++ KPD+ Y LI L + A
Sbjct: 499 GLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRA 558
Query: 334 TQVFREMIKRGCEPTMHTYIMLLQG 358
+ +EM+ G +PT+ TY +L+ G
Sbjct: 559 HDLLQEMLDNGIKPTIVTYNVLMNG 583
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 112/264 (42%), Gaps = 9/264 (3%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMT 117
F + Q A N +T+ + D + K ++ E L EM + L +N T+ +
Sbjct: 454 FQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLING 513
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPN 176
L + L + + M+ G + + ++ LC+ + A L+ + L IKP
Sbjct: 514 LCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPT 573
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
+ Y L+ G+C G + K+ M ++ P+ + +++ + N ++++
Sbjct: 574 IVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYK 633
Query: 237 MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR 296
M R + +TY I+I CK + +A EM ++G + S++I L +
Sbjct: 634 GM-CSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKK 692
Query: 297 GRLREAYKVVEEIEK------PDI 314
+ EA K+ ++ K PD+
Sbjct: 693 KKFVEARKLFHDMRKEGFTAEPDV 716
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 89/248 (35%), Gaps = 46/248 (18%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFF 131
N+ T+N +++ + K+ +D T+ +M L D T+ + L + EL + +
Sbjct: 503 NACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLL 562
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW------------------- 172
M D G + ++ N ++ C V K KL EW
Sbjct: 563 QEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGK----KLLEWMLEKNIHPNATTYNSLMKQ 618
Query: 173 ---------------------IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPS 211
++PNE Y LIKG+C + EA N M ++GF +
Sbjct: 619 YCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLT 678
Query: 212 IDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTML 271
+I K K EA K+F MR K Y ID+ + +
Sbjct: 679 ASSYSALIRLLNKKKKFVEARKLFHDMR-KEGFTAEPDVYNFYIDFNFNEDNLEATLALC 737
Query: 272 EEMFKRGI 279
+E+ + I
Sbjct: 738 DELVEASI 745
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/445 (22%), Positives = 180/445 (40%), Gaps = 68/445 (15%)
Query: 39 HEFFLQICNNFPLSWRPVYLFFQYT----QKAQPCFA--HNSITFNRMVDIIGKSRNIDL 92
H+ L + ++F S+ LF + QP F +++ +N +++++ + + L
Sbjct: 105 HQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKL 164
Query: 93 FWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIMNDCGCE-----YSLEML 146
EMG R + D TF + L +++ V M+ G ++ M
Sbjct: 165 LESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQ 224
Query: 147 NKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDE 206
V + + L V+A+ L + S ++ LI GYC +G + +A +
Sbjct: 225 GFVEEGSIEAALRVKARMLEMGCS----ATKVTVNVLINGYCKLGRVEDALGYIQQEIAD 280
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQ 266
GFEP + + + + A+KV +M V+ D + TY IV++ +CK G++ +
Sbjct: 281 GFEPDQITYNTFVNGLCQNDHVGHALKVMDVM-VQEGHDPDVFTYNIVVNCLCKNGQLEE 339
Query: 267 AYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIK 322
A +L +M RG D T +++I L RL EA + ++ PD+ ++ LI
Sbjct: 340 AKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILIN 399
Query: 323 GLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG--HLGKRGRK-----------GPD 369
L ++ A ++F EM GC P TY L+ LGK G+ P
Sbjct: 400 ALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPR 459
Query: 370 PLVNFDTIFVG----------------------------------GLVKAGKSLDAAKYV 395
+ ++TI G GL K K DA + +
Sbjct: 460 STITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELI 519
Query: 396 ERVMNRGVEVPRFDYNKFLHYYSNE 420
++++ G++ YN L +Y +
Sbjct: 520 NQMISEGLQPNNITYNSILTHYCKQ 544
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 158/359 (44%), Gaps = 22/359 (6%)
Query: 6 GHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQK 65
GH ++V ++ Q+ + P+ ++ + +C +C N L L +
Sbjct: 303 GHALKVMDVMVQEGHDPDVFTYNIVVNC-----------LCKNGQLEEAKGILNQMVDRG 351
Query: 66 AQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVREL 124
P + TFN ++ + ++ + +++ + + D TF I + L +V +
Sbjct: 352 CLP----DITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDP 407
Query: 125 KKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKP-NEIAYGWL 183
+ F M + GC N ++ LC + +A L+ + P + I Y +
Sbjct: 408 HLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTI 467
Query: 184 IKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM 243
I G C + EA ++++ M +G + + +I+ K K D+A ++ M + +
Sbjct: 468 IDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGL 527
Query: 244 DDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
+ TY ++ CK+G I +A +LE M G E D +T ++I GL GR + A
Sbjct: 528 QPNNI-TYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVAL 586
Query: 304 KVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
KV+ + +P Y+ +++ L R R+A +FREM + G P TY ++ +G
Sbjct: 587 KVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRG 645
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 99/443 (22%), Positives = 181/443 (40%), Gaps = 91/443 (20%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKT-FKIALMTLAE 120
Y++ + +TFN ++ + ++ + L+EM R + D+T F + E
Sbjct: 169 YSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVE 228
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIA 179
++ + M + GC + +N ++ C+ V +A Y+ ++++ +P++I
Sbjct: 229 EGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQIT 288
Query: 180 YGWLIKGYC----------------------DV-------------GDLIEASKIWNLMT 204
Y + G C DV G L EA I N M
Sbjct: 289 YNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMV 348
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK----------------------- 241
D G P I + +I N+ +EA+ + + + VK
Sbjct: 349 DRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPH 408
Query: 242 -------RMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
M + G + TY +ID +C GK+ +A +L++M G +T ++II
Sbjct: 409 LALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTII 468
Query: 291 YGLLARGRLREAYKVVEEIEKPDIS----LYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
GL + R+ EA +V ++++ IS ++ LI GL + ++ +A ++ +MI G +
Sbjct: 469 DGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQ 528
Query: 347 PTMHTYIMLLQGHLGKRG--RKGPDPL------------VNFDTIFVGGLVKAGKSLDAA 392
P TY +L H K+G +K D L V + T+ + GL KAG++ A
Sbjct: 529 PNNITYNSILT-HYCKQGDIKKAADILETMTANGFEVDVVTYGTL-INGLCKAGRTQVAL 586
Query: 393 KYVERVMNRGVEVPRFDYNKFLH 415
K + + +G+ YN L
Sbjct: 587 KVLRGMRIKGMRPTPKAYNPVLQ 609
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 131/292 (44%), Gaps = 8/292 (2%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIM 134
TFN +++ + K + L +EM D+ T+ + L + +L K ++ M
Sbjct: 393 TFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM 452
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDL 193
GC S N ++ LC++ + EA+ + ++ + I N I + LI G C +
Sbjct: 453 ESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKI 512
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
+A ++ N M EG +P+ + ++ + K +A + + M + + + TY
Sbjct: 513 DDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFE-VDVVTYGT 571
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI---- 309
+I+ +CK G+ A +L M +G+ + ++ L R +R+A + E+
Sbjct: 572 LINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVG 631
Query: 310 EKPDISLYHGLIKGLLRLRRA-REATQVFREMIKRGCEPTMHTYIMLLQGHL 360
E PD Y + +GL R +EA EM+ +G P ++ ML +G L
Sbjct: 632 EPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLL 683
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 80/183 (43%), Gaps = 30/183 (16%)
Query: 271 LEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLR 326
L+ +F GI+AD + + ++ L+ +++ V E+ KPD+ ++ L+K L R
Sbjct: 136 LQPLF--GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCR 193
Query: 327 LRRAREATQVFREMIKRGCEPTMHTYIMLLQG---------------HLGKRGRKGPDPL 371
+ R A + EM RG P T+ L+QG + + G
Sbjct: 194 AHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVT 253
Query: 372 VNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGK 431
VN + + G K G+ DA Y+++ + G E + YN F++ G+ + VG
Sbjct: 254 VN---VLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVN------GLCQNDHVGH 304
Query: 432 KLR 434
L+
Sbjct: 305 ALK 307
>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 179/418 (42%), Gaps = 60/418 (14%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
+++ FNR++ I K+++ ++M + D T I + +L + + +
Sbjct: 44 STVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSAL 103
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
+ G + +++ LC + EA +L K+ E +PN + YG LI G C
Sbjct: 104 AKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKD 163
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLS 249
+ EA I++ M +G P+I + +I K+ + + +M+ K M D+
Sbjct: 164 RQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDV--F 221
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV---- 305
T V+D +CK G +++A+ +++ M RG+E + +T ++++ G R + A KV
Sbjct: 222 TLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTM 281
Query: 306 ---------------------VEEIEK--------------PDISLYHGLIKGLLRLRRA 330
++ ++K P+ Y+ LI GL + R
Sbjct: 282 VHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRL 341
Query: 331 REATQVFREMIKRGCEPTMHTYIMLL-----QGHLGK-----RGRKGP--DPLVNFDTIF 378
++A +F EM+ RG P + TY L HL K + +G DP + T
Sbjct: 342 QDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTI 401
Query: 379 VGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE----EGVVMFEEVGKK 432
+ G+ +AG+ DA + ++G++ + YN +H + E +F E+ K
Sbjct: 402 LDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKN 459
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 147/331 (44%), Gaps = 40/331 (12%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMV 128
F N +T+ +++ + K R + + EM + + N T+ + L ++ E K +
Sbjct: 146 FQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVT 205
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGY 187
+ M D + LN VV LC+ +V EA ++ + + ++PN + Y L+ G+
Sbjct: 206 TLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGH 265
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM--------- 238
C ++ A K+++ M + ++ + +I + KI D+AM +F+ M
Sbjct: 266 CLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNT 325
Query: 239 -----------RVKRMDDL--------------GLSTYRIVIDWMCKRGKISQAYTMLEE 273
V R+ D L TYR + D++CK + +A +L+
Sbjct: 326 VTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKA 385
Query: 274 MFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRR 329
+ + D ++I+ G+ G L +A + + +P++ Y+ +I GL +
Sbjct: 386 IEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGL 445
Query: 330 AREATQVFREMIKRGCEPTMHTYIMLLQGHL 360
EA+++F EM K GC P TY ++ +G L
Sbjct: 446 LAEASKLFSEMNKNGCSPNDCTYNLITRGFL 476
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 135/295 (45%), Gaps = 8/295 (2%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVR-ELKKMVNFFHIM 134
T N +VD + K + + + M R + + ALM +R E+ V F M
Sbjct: 222 TLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTM 281
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDL 193
C ++ N ++ C+ + V +A YL ++S + + PN + Y LI G C VG L
Sbjct: 282 VHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRL 341
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
+A +++ M G P + + + K D+AM + + + D + Y
Sbjct: 342 QDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDP-DIQIYTT 400
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK-- 311
++D MC+ G++ A + + +G++ + T + +I+GL +G L EA K+ E+ K
Sbjct: 401 ILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNG 460
Query: 312 --PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
P+ Y+ + +G LR A ++ EM+ RG + T +L+ G L G
Sbjct: 461 CSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLV-GMLSDDG 514
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 119/244 (48%), Gaps = 3/244 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVR-ELKKMVNFF 131
N + F+ +VD + K I + + + M +R + D ALM +R E+ + V F
Sbjct: 707 NVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVF 766
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDV 190
M GC ++ N ++ CQ + + +A L+ ++S + + + + Y LI G C V
Sbjct: 767 DTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHV 826
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G L A +++ M G P + +++ K + EAM + + + +D +
Sbjct: 827 GRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLD-ADILV 885
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y I ID MC+ G++ A + + +G++ D T + +I+GL RG L EA K+ +++
Sbjct: 886 YNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMD 945
Query: 311 KPDI 314
+ DI
Sbjct: 946 ENDI 949
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 115/255 (45%), Gaps = 27/255 (10%)
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS--- 249
L EA +N M + PS ++++ + K + + ++MD G+
Sbjct: 26 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSL-----SRQMDSFGIPPDV 80
Query: 250 -TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY----K 304
T IVI+ +C ++ A++ L ++ K G + D T +++I GL G++ EA K
Sbjct: 81 YTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDK 140
Query: 305 VVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG------ 358
++ E +P++ Y LI GL + R+ EA +F EMI +G P + TY L+ G
Sbjct: 141 MIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCE 200
Query: 359 --HLGKRGRKGPDPLVNFDTI----FVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNK 412
H+ + D + D V L K G +A V+ +++RGVE YN
Sbjct: 201 WKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNA 260
Query: 413 FL--HYYSNEEGVVM 425
+ H NE V +
Sbjct: 261 LMDGHCLRNEVDVAV 275
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 124/270 (45%), Gaps = 39/270 (14%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LK 168
T+ + L + E K + + M + ++ + + VV LC+ ++ A ++ +
Sbjct: 675 TYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMM 734
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
+ ++P+ + Y L+ G+C ++ EA K+++ M +G P++ + +I + +I +
Sbjct: 735 IKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRM 794
Query: 229 DEAMKVFQMMRVKRM--DDL--------------------------------GLSTYRIV 254
D+AM + + M ++ + D + L TYRI+
Sbjct: 795 DKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRIL 854
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE---- 310
+D++CK +++A +L+ + ++AD L + I G+ G L A + +
Sbjct: 855 LDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGL 914
Query: 311 KPDISLYHGLIKGLLRLRRAREATQVFREM 340
+PD+ Y+ +I GL + EA ++FR+M
Sbjct: 915 QPDVRTYNIMIHGLCKRGLLDEANKLFRKM 944
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 158/363 (43%), Gaps = 27/363 (7%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRR----LVNDKTFKIALMTLAEVRELKKMVNFF 131
+FNRM+ + +D F + L + + + +++ T + +V L ++N F
Sbjct: 568 SFNRMLHMHPPPSTVD-FTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSF 626
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKY---LILKLSEWIKPNEIAYGWLIKGYC 188
+ G Y+ +L K++K Q +V L +++ I P+ Y LI C
Sbjct: 627 CHLRRLG--YAFSVLAKLLKLGFQPDVVTYGTLMNGLCKMITKGISPDIFTYNSLIHALC 684
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
++ + + + N M + P++ V +++ K A V MM +KR + +
Sbjct: 685 NLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMM-IKRGVEPDV 743
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY ++D C R ++ +A + + M +G + + + +I G R+ +A ++E+
Sbjct: 744 VTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQ 803
Query: 309 IEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL-----QGH 359
+ D Y+ LI GL + R + A +F EM+ G P + TY +LL H
Sbjct: 804 MSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHH 863
Query: 360 LGK-----RGRKGP--DPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNK 412
L + + +G D + I + G+ +AG+ A + ++G++ YN
Sbjct: 864 LAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNI 923
Query: 413 FLH 415
+H
Sbjct: 924 MIH 926
>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
Length = 762
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 152/326 (46%), Gaps = 14/326 (4%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHI 133
+T+N ++D + K+ + M +R L D T+ L A L +M +
Sbjct: 302 VTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDL 361
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M G + N ++ +++ V EA + K+ + + PN + YG +I C G
Sbjct: 362 MVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGS 421
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ +A + M DEG P+I V +I + +K D+A ++ M + R L +
Sbjct: 422 VDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEM-LDRGICLNTIFFN 480
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI--- 309
+I CK G++ ++ + + M + G++ + +T S++I G G++ EA K++ +
Sbjct: 481 SIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSV 540
Query: 310 -EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGP 368
KPD Y+ LI G R+ R +A +F+EM+ G P + TY ++LQG R
Sbjct: 541 GMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAA 600
Query: 369 DPLVNFDTIFVGGLVKAGKSLDAAKY 394
L +V G+ K+G L+ + Y
Sbjct: 601 KEL------YV-GITKSGTQLELSTY 619
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 163/365 (44%), Gaps = 34/365 (9%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHI 133
+T++ ++ + K + +D E L M + ++ N T+ L + K+ + F
Sbjct: 232 VTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKK 291
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M G E + N ++ LC+ EA+ + +++ ++P+ Y L++GY G
Sbjct: 292 MRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGA 351
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
L+E + +LM G P V + +I + K K DEAM VF MR ++ + TY
Sbjct: 352 LVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNP-NVVTYG 410
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP 312
VI +CK G + A E+M G+ + + +S+I+ L + +A +++ E+
Sbjct: 411 AVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDR 470
Query: 313 DISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGP 368
I L ++ +I + R E+ ++F M++ G +P + TY L+ G+
Sbjct: 471 GICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGY--------- 521
Query: 369 DPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN----EEGVV 424
AGK +A K + + + G++ YN ++ Y ++ +
Sbjct: 522 --------------CLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALA 567
Query: 425 MFEEV 429
+F+E+
Sbjct: 568 LFKEM 572
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 141/299 (47%), Gaps = 33/299 (11%)
Query: 149 VVKTLCQRKLVVEAKYLILK-LSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDE 206
++K LC K +A ++L+ ++E P+ + L+KG CD EA ++ ++M D+
Sbjct: 128 LLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADD 187
Query: 207 ---GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGK 263
G P + +I FFK D+A + M +R+ + TY +I +CK
Sbjct: 188 RGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISP-DVVTYSSIIAALCKGQA 246
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHG 319
+ +A +L M K G+ + +T +SI++G + + +EA ++++ +PD+ Y+
Sbjct: 247 MDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNS 306
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFV 379
L+ L + R+ EA ++F M KRG EP + TY LLQG+ K
Sbjct: 307 LMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATK----------------- 349
Query: 380 GGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
G LV+ LD ++ G+ +N + Y+ +E V V K+R+ GL
Sbjct: 350 GALVEMHALLDL------MVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGL 402
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 143/304 (47%), Gaps = 11/304 (3%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNID---LFWETLQEMGRRRLVNDKTFKIALMTL 118
+++ Q N +T+ ++ I+ KS ++D L++E + + G N + + +L
Sbjct: 394 FSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTP--NIIVYTSLIHSL 451
Query: 119 AEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNE 177
+ K M D G + N ++ + C+ V+E++ L L + +KPN
Sbjct: 452 CIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNV 511
Query: 178 IAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQM 237
I Y LI GYC G + EA+K+ + M G +P + +I + ++++ D+A+ +F+
Sbjct: 512 ITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKE 571
Query: 238 MRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
M V + TY I++ + + + A + + K G + + T + I++GL
Sbjct: 572 M-VSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNN 630
Query: 298 RLREAYKVVEEIEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYI 353
EA ++ + + D+ L ++ +I LL++ R EA +F + G P + TY
Sbjct: 631 LTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYS 690
Query: 354 MLLQ 357
++ +
Sbjct: 691 LMAE 694
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 106/252 (42%), Gaps = 42/252 (16%)
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV--- 306
TY I+I C+ G++ + L + K+G + +T + ++ GL A R +A +V
Sbjct: 89 TYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRR 148
Query: 307 --EEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKR---GCEPTMHTYIMLLQGHLG 361
E PD+ L+KGL R++EA ++ M G P + +Y ++ G
Sbjct: 149 MTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFF- 207
Query: 362 KRG---------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
K G R PD +V + +I + L K G+++D A V M + +P
Sbjct: 208 KEGDSDKAYSTYHEMLDRRISPD-VVTYSSI-IAALCK-GQAMDKAMEVLTTMVKNGVMP 264
Query: 407 R-FDYNKFLHYYSNEEGVVMFEEVG--KKLREVGLA-------DLADIFQRYGKKMATR- 455
YN LH Y + E E +G KK+R G+ L D + G+ R
Sbjct: 265 NCMTYNSILHGYCSSEQPK--EAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARK 322
Query: 456 --ERRRNRAIEP 465
+ R +EP
Sbjct: 323 IFDSMTKRGLEP 334
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 48/246 (19%), Positives = 105/246 (42%), Gaps = 3/246 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFF 131
N IT++ ++D + +D + L M + D T+ + V + + F
Sbjct: 510 NVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALF 569
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIA-YGWLIKGYCDV 190
M G ++ N +++ L + AK L + +++ E++ Y ++ G C
Sbjct: 570 KEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKN 629
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
EA +++ + + + MI K+ ++DEA +F + + + T
Sbjct: 630 NLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVP-DVRT 688
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y ++ + + ++G + + + M + G A++ L+SI+ LL RG + A + I+
Sbjct: 689 YSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLSMID 748
Query: 311 KPDISL 316
+ SL
Sbjct: 749 EKHFSL 754
>gi|224117122|ref|XP_002317482.1| predicted protein [Populus trichocarpa]
gi|222860547|gb|EEE98094.1| predicted protein [Populus trichocarpa]
Length = 433
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 182/392 (46%), Gaps = 27/392 (6%)
Query: 37 LTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWET 96
+T + L++ W+P Y+FF + K + + +S +N ++DI+G+ R +
Sbjct: 1 MTQDLVLKVLKRHRSDWKPAYIFFNWVSK-EGTISLSSCVYNEILDILGRMRRFEELTLV 59
Query: 97 LQEMGRRR-LVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQ 155
L EM +R V++ T+++ + A +++ + F+ + G E L K++ LC+
Sbjct: 60 LDEMSKREGFVDEDTYRVLVNRYAGAHMVEEAIGAFNKRRELGLELDLVSFQKLLMYLCR 119
Query: 156 RKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVV 215
K V A+ L+ + ++ G+C +G++ EA + W + +P +
Sbjct: 120 YKHVDVAETLLHSKGHEFGVDIKTMNIVLNGWCVLGNVREAKRFWKDIIASKCKPDVFTY 179
Query: 216 DKMIETFFKINKDDEAMKVFQMM-RVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEM 274
I+ K AMK+++ M +++ D+ + VID +C + ++ +A + E M
Sbjct: 180 GTFIKALTNKGKLGTAMKLYEAMWKMQCKPDVVICN--CVIDALCFKKRVPEALAVFEGM 237
Query: 275 FKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK------PDISLYHGLIKGLLRLR 328
+RG + T +S+I + GR+ + Y++++E+++ PD ++ L+K L+
Sbjct: 238 KERGCIPNVATYNSLIKHMCKIGRMEKVYELLDEMQEKKGSCMPDEITFNYLLKS---LK 294
Query: 329 RAREATQVFREMIKRGCEPTMHTYIMLLQGHLG----KRGRKGPDPL----VNFD----T 376
+ E V M GC+ T +LL+ H ++ R + + + D T
Sbjct: 295 KPEEVAGVLERMKINGCKMNNDTCNLLLKLHADWDSEEKVRYTWEEMEKNGLGLDRRSYT 354
Query: 377 IFVGGLVKAGKSLDAAKYVERVMNRG-VEVPR 407
I + L G+ DA +Y + N+G V PR
Sbjct: 355 IMIHWLYDKGRVEDALRYFGEMENKGMVPEPR 386
>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
Length = 859
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 153/329 (46%), Gaps = 44/329 (13%)
Query: 70 FAHNSITFNRMVDII---GKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKK 126
F +++ FN M+ + GK ++ ++E+G ++ T++ + +++
Sbjct: 503 FTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSP--DEITYRTLSDGYCKNGNVQE 560
Query: 127 MVNFFHIMNDCGCEYSLEMLNKVVKTLCQ-RKLVVEAKYLILKLSEWIKPNEIAYGWLIK 185
+M S+EM N ++ L + RKL L+ + + PN + YG LI
Sbjct: 561 AFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLIS 620
Query: 186 GYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV------FQMMR 239
G+CD L +A ++ M + GF P++ V K++ + ++ ++ EA + F ++
Sbjct: 621 GWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILA 680
Query: 240 VKRM-------DDLGLST---------------------YRIVIDWMCKRGKISQAYTML 271
V +DL L Y I ID +CK GK+ +A ++L
Sbjct: 681 VHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVL 740
Query: 272 EEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE-IEK---PDISLYHGLIKGLLRL 327
+ RG DN T ++I+ G + EA+K+ +E +EK P+I++Y+ LI GL +L
Sbjct: 741 SVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKL 800
Query: 328 RRAREATQVFREMIKRGCEPTMHTYIMLL 356
A ++F ++ ++G P TY +L+
Sbjct: 801 GNIDRAQRLFYKLYQKGLVPNAVTYNILI 829
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 110/217 (50%), Gaps = 6/217 (2%)
Query: 147 NKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N ++ C+ V +A L + L + I P + Y +IKG DVG +A +W+LM +
Sbjct: 406 NTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVE 465
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKIS 265
G P+ M++ FFK+ D AM +++ + + R + +I +CK GK+
Sbjct: 466 RGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEI-LGRGFTKSTVAFNTMISGLCKMGKLM 524
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLI 321
+A + + M + G+ D +T ++ G G ++EA+++ +E+ I +Y+ LI
Sbjct: 525 EAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLI 584
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
GL ++R+ + T + EM RG P + TY L+ G
Sbjct: 585 DGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISG 621
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 109/219 (49%), Gaps = 5/219 (2%)
Query: 145 MLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLM 203
M + VV CQ V A ++ K+ E ++PN + Y L+ GY GD ++ LM
Sbjct: 228 MCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLM 287
Query: 204 TDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGK 263
++ G ++ ++ + K K DEA K+ + + + + Y +++D C+ G+
Sbjct: 288 SERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMGR 347
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV----VEEIEKPDISLYHG 319
+ A + +EM + G++ + + +++I G G++ EA +V V+ KPD Y+
Sbjct: 348 MEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNT 407
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
L+ G R + +A + EM+ G PT+ TY +++G
Sbjct: 408 LLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKG 446
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL--SEWIKPNEIAYGWLIKGYC 188
+M++ G ++ +++ C++ + EA+ L+ ++ E + +E YG L+ GYC
Sbjct: 284 LRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYC 343
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
+G + +A +I + M G + ++ + + +I+ + K+ + EA +VF M V
Sbjct: 344 QMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGM-VDWNLKPDC 402
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA----YK 304
+Y ++D C+ GK+S+A+ + EEM GI +T +++I GL+ G +A +
Sbjct: 403 YSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHL 462
Query: 305 VVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
+VE P+ ++ ++ + A +++E++ RG +
Sbjct: 463 MVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKST--------------- 507
Query: 365 RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGV 423
V F+T+ + GL K GK ++A +R+ G+ Y Y V
Sbjct: 508 -------VAFNTM-ISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNV 558
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 67/136 (49%), Gaps = 2/136 (1%)
Query: 147 NKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N + LC+ + EA+ ++ + +S P+ Y LI G++ EA K+ + M +
Sbjct: 721 NIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLE 780
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKIS 265
+G P+I + + +I K+ D A ++F + K + + TY I+I C+ G +
Sbjct: 781 KGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAV-TYNILIGCYCRIGDLD 839
Query: 266 QAYTMLEEMFKRGIEA 281
+A + E+M + GI
Sbjct: 840 KASRLREKMTEEGIST 855
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 2/142 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVR-ELKKMVNFF 131
N+I +N +D + KS +D L + R + D L+ V + +
Sbjct: 716 NNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLR 775
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
M + G ++ + N ++ LC+ + A+ L KL + + PN + Y LI YC +
Sbjct: 776 DEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRI 835
Query: 191 GDLIEASKIWNLMTDEGFEPSI 212
GDL +AS++ MT+EG I
Sbjct: 836 GDLDKASRLREKMTEEGISTRI 857
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 74/166 (44%), Gaps = 16/166 (9%)
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
+ +++ +RG A + +EM + G + S ++ L+ +G R A V ++
Sbjct: 157 GVFDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQ 216
Query: 309 IEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
I PD+ + ++ ++ R A +V +M+K G EP + TY L+ G++G+
Sbjct: 217 IVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGD 276
Query: 365 RKGPDPLVNF------------DTIFVGGLVKAGKSLDAAKYVERV 398
+G + ++ T+ + G K GK +A K + V
Sbjct: 277 FEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREV 322
>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 126/244 (51%), Gaps = 14/244 (5%)
Query: 123 ELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYG 181
+L F M + G ++ N ++ LCQ + V+EA+ L+ ++ + + PN I+Y
Sbjct: 284 KLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYN 343
Query: 182 WLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK 241
LI GYC +G+L +AS ++N M G PS+ + +I F ++ + V M+R
Sbjct: 344 TLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGF---SEAKNSAGVTDMVR-- 398
Query: 242 RMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
M+ GLS TY I++D + + I +A+ + M K G+ AD +I+GL G
Sbjct: 399 EMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVG 458
Query: 298 RLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYI 353
++EA K+ + ++ KP+ +Y+ +I G + + A ++ +EM + G P + +Y
Sbjct: 459 DMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYN 518
Query: 354 MLLQ 357
+Q
Sbjct: 519 STIQ 522
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 139/340 (40%), Gaps = 42/340 (12%)
Query: 37 LTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWET 96
L HE I N S P F + Q S TFN ++ ++ KS + W
Sbjct: 96 LIHE---AIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRV 152
Query: 97 LQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQR 156
E ++ +F I + EV L K M + G
Sbjct: 153 FNETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMG------------------ 194
Query: 157 KLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVD 216
+ PN + Y LI G C GD+ +++ M + +
Sbjct: 195 ----------------LSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYT 238
Query: 217 KMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFK 276
+I FFK+ + +++++ M++ + + TY +I C GK++ A+ + +EM +
Sbjct: 239 VLINGFFKMGLKKDGIELYEKMKLTGIVP-NVYTYNSMICRCCNDGKLNNAFELFDEMRE 297
Query: 277 RGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRARE 332
RG+ + +T +++I GL R+ EA +++ +++ P++ Y+ LI G + +
Sbjct: 298 RGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDK 357
Query: 333 ATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLV 372
A+ +F +M G P++ TY +L+ G + G +V
Sbjct: 358 ASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMV 397
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 83/194 (42%), Gaps = 12/194 (6%)
Query: 58 LFFQYTQKAQ-PCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIAL 115
LF Q Q P A T+N ++ +++N + ++EM R L K T+ I +
Sbjct: 361 LFNQMKSSGQSPSLA----TYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILM 416
Query: 116 MTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IK 174
L ++K + M G + + ++ LC + EA L L E +K
Sbjct: 417 DALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLK 476
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
PN++ Y +I GYC G A ++ M + G P++ + I+ K K EA
Sbjct: 477 PNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEA--- 533
Query: 235 FQMMRVKRMDDLGL 248
+ +K M +LGL
Sbjct: 534 --EVLLKDMIELGL 545
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 80/189 (42%), Gaps = 15/189 (7%)
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE---KPDISLYHGLIK 322
QA +M RG+ + T ++++ L+ +A++V E + K D+ + +IK
Sbjct: 113 QALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNETKGNVKLDVYSFGIMIK 172
Query: 323 GLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG----KRGRKGPDPLVNFD--- 375
G + + +V +M + G P + Y L+ G +RG++ + D
Sbjct: 173 GCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVA 232
Query: 376 -----TIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVG 430
T+ + G K G D + E++ G+ + YN + N+ + E+
Sbjct: 233 NQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELF 292
Query: 431 KKLREVGLA 439
++RE G+A
Sbjct: 293 DEMRERGVA 301
>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 783
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 141/287 (49%), Gaps = 14/287 (4%)
Query: 83 IIGK---SRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIMNDCG 138
IIGK +L+W+ LQE+ + ++ + F + + +E +K V F +M D
Sbjct: 99 IIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFD 158
Query: 139 CEYSLEMLNKVVKTLCQRK--LVVEAKY-LILKLSEWIKPNEIAYGWLIKGYCDVGDLIE 195
C+ L N ++ L +++ L+ A Y +LK + + P+ + YG LI G C +
Sbjct: 159 CKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCN--LNPDVVTYGILIHGLCKTCKTQD 216
Query: 196 ASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVI 255
A +++ MTD G P+ + ++ + K +A ++F MR + L TY +++
Sbjct: 217 ALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNR-DLITYNVLL 275
Query: 256 DWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY----KVVEEIEK 311
+ CK G + A+T+L+ + K G + +I GL R EA+ K++ E K
Sbjct: 276 NGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIK 335
Query: 312 PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
PD+ LY +I+GL + R EA + EM +RG P Y L++G
Sbjct: 336 PDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKG 382
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 127/255 (49%), Gaps = 8/255 (3%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T+ I + L + + + + F M D G + + + V+ LCQ K + +A+ L K+
Sbjct: 200 TYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKM 259
Query: 170 -SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
+ + I Y L+ G+C G L +A + L+T +G + +I F+ +
Sbjct: 260 RASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRY 319
Query: 229 DEAMKVFQ-MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLS 287
+EA +Q M+R D+ L Y I+I + + G++++A T+L EM +RG+ D + +
Sbjct: 320 EEAHMWYQKMLRENIKPDVML--YTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYN 377
Query: 288 SIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
++I G G L EA + EI K P+ Y LI G+ + +A +F+EM K
Sbjct: 378 ALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKL 437
Query: 344 GCEPTMHTYIMLLQG 358
GC P++ T+ L+ G
Sbjct: 438 GCLPSVVTFNSLING 452
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 126/289 (43%), Gaps = 36/289 (12%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
L E IKP+ + Y +I+G G + EA + MT+ G P + +I+ F +
Sbjct: 330 LRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYL 389
Query: 229 DEAMKVFQMMRVKRMDDL-GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLS 287
DEA + + + + D TY I+I MCK G I++A + +EM K G +T +
Sbjct: 390 DEAESL--RLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFN 447
Query: 288 SIIYGLLARGRLREA---YKVVEEIEKP--------------DISLYHGLIKGLLRLRRA 330
S+I GL RL EA + +E + KP DI+ +++ L
Sbjct: 448 SLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMI 507
Query: 331 REATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKG--------------PDPLVNFDT 376
+A ++ +++ G P + TY +L+ G G PD V + T
Sbjct: 508 LKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDS-VTYGT 566
Query: 377 IFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVM 425
+ + GL +AG++ DA + E+++ +G Y + + E + +
Sbjct: 567 L-IDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISL 614
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 94/254 (37%), Gaps = 79/254 (31%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N ++K C + EA+ L L++S+ PN Y LI G C G + +A I+ M
Sbjct: 377 NALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEK 436
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS---------------- 249
G PS+ + +I K N+ +EA +F M + R L L
Sbjct: 437 LGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQV 496
Query: 250 -------------------------------TYRIVIDWMCKRGKISQAYTMLEEMFKRG 278
TY I+I+ CK G I+ A+ + +EM +G
Sbjct: 497 MMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKG 556
Query: 279 IEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFR 338
D++T ++I GL G R +A ++F
Sbjct: 557 HMPDSVTYGTLIDGLYRAG-------------------------------RNEDALEIFE 585
Query: 339 EMIKRGCEPTMHTY 352
+M+K+GC P TY
Sbjct: 586 QMVKKGCVPESSTY 599
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 93/199 (46%), Gaps = 17/199 (8%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
N+ T+ I + + + + K + F M GC S+ N ++ LC+ + EA+ L
Sbjct: 407 NNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLF 466
Query: 167 LKLSEWIKPN-------------EIA-YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSI 212
++ KP+ +IA +++ C+ G +++A K+ + D G P I
Sbjct: 467 YQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDI 526
Query: 213 DVVDKMIETFFKINKDDEAMKVFQMMRVK-RMDDLGLSTYRIVIDWMCKRGKISQAYTML 271
+ +I F K + A K+F+ M++K M D TY +ID + + G+ A +
Sbjct: 527 RTYNILINGFCKFGNINGAFKLFKEMQLKGHMPD--SVTYGTLIDGLYRAGRNEDALEIF 584
Query: 272 EEMFKRGIEADNLTLSSII 290
E+M K+G ++ T +I+
Sbjct: 585 EQMVKKGCVPESSTYKTIM 603
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 131/292 (44%), Gaps = 34/292 (11%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+TF+ ++D+ K + E EM R + D T+ + + L + F +
Sbjct: 345 VTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDL 404
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGD 192
M GCE + + ++ + C+ K V + L ++S + + PN I Y L+ G+C G
Sbjct: 405 MVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK 464
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
L A +++ M G PS+ +++ + ++A+++F+ M+ RM LG+ Y
Sbjct: 465 LNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT-LGIGIYN 523
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP 312
I+I MC K+ A+++ + +G+ KP
Sbjct: 524 IIIHGMCNASKVDDAWSLFCSLSDKGV-------------------------------KP 552
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
D+ Y+ +I GL + EA +FR+M + GC P TY +L++ HLG G
Sbjct: 553 DVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSG 604
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 158/360 (43%), Gaps = 23/360 (6%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIM 134
I FNR+ + +++ DL + M + +D + + +M R+ KK++ F ++
Sbjct: 100 IDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHD-MYTMTIMINCYCRK-KKLLFAFSVL 157
Query: 135 NDC---GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDV 190
G E + +V C V EA L+ ++ E +P+ + LI G C
Sbjct: 158 GRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLK 217
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G + EA + + M + GF+P ++ K A+ +F+ M +R +
Sbjct: 218 GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKME-ERNIKASVVQ 276
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y IVID +CK G A ++ EM +GI+AD +T SS+I GL G+ + K++ E+
Sbjct: 277 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 336
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG-- 364
PD+ + LI ++ + EA +++ EMI RG P TY L+ G +
Sbjct: 337 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 396
Query: 365 ----------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
KG +P + +I + KA + D + + ++G+ YN +
Sbjct: 397 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 456
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 135/286 (47%), Gaps = 29/286 (10%)
Query: 159 VVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDK 217
++EAK L ++ + I P+ I Y LI G+C L EA+++++LM +G EP I
Sbjct: 360 LLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSI 419
Query: 218 MIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKR 277
+I ++ K + D+ M++F+ + K + + TY ++ C+ GK++ A + +EM R
Sbjct: 420 LINSYCKAKRVDDGMRLFREISSKGLIPNTI-TYNTLVLGFCQSGKLNAAKELFQEMVSR 478
Query: 278 GIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP----DISLYHGLIKGLLRLRRAREA 333
G+ +T ++ GL G L +A ++ E+++K I +Y+ +I G+ + +A
Sbjct: 479 GVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDA 538
Query: 334 TQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAK 393
+F + +G +P + TY + +GGL K G +A
Sbjct: 539 WSLFCSLSDKGVKPDVVTY-----------------------NVMIGGLCKKGSLSEADM 575
Query: 394 YVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLA 439
++ G F YN + + G++ E+ ++++ G +
Sbjct: 576 LFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFS 621
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 92/393 (23%), Positives = 161/393 (40%), Gaps = 56/393 (14%)
Query: 49 FPLSWRPVYLFFQYTQKAQPCFAHNSIT----------FNRMVDIIGKSRNIDLFWETLQ 98
PL+ R F Q +K ++SIT N +VDI + IDLF +Q
Sbjct: 35 IPLN-RKASNFTQILEKGTSLLHYSSITEAKLSYKERLRNGIVDI-KVNDAIDLFESMIQ 92
Query: 99 EMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKL 158
R L F +A ++ ++ F M G E+ + + ++ C++K
Sbjct: 93 S---RPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKK 149
Query: 159 VVEAKYLILKLSEW---IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVV 215
++ A ++ + W +P+ I + L+ G+C G + EA + + M + P + V
Sbjct: 150 LLFAFSVLGR--AWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTV 207
Query: 216 DKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTML 271
+I + EA+ + + RM + G TY V++ +CK G + A +
Sbjct: 208 STLINGLCLKGRVSEAL-----VLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF 262
Query: 272 EEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRL 327
+M +R I+A + S +I L G +A + E+E K D+ Y LI GL
Sbjct: 263 RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCND 322
Query: 328 RRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGK 387
+ + ++ REMI R P + T+ L+ +FV K GK
Sbjct: 323 GKWDDGAKMLREMIGRNIIPDVVTFSALID-------------------VFV----KEGK 359
Query: 388 SLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE 420
L+A + ++ RG+ YN + + E
Sbjct: 360 LLEAKELYNEMITRGIAPDTITYNSLIDGFCKE 392
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/445 (22%), Positives = 180/445 (40%), Gaps = 68/445 (15%)
Query: 39 HEFFLQICNNFPLSWRPVYLFFQYT----QKAQPCFA--HNSITFNRMVDIIGKSRNIDL 92
H+ L + ++F S+ LF + QP F +++ +N +++++ + + L
Sbjct: 13 HQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKL 72
Query: 93 FWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIMNDCGCE-----YSLEML 146
EMG R + D TF + L +++ V M+ G ++ M
Sbjct: 73 LESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQ 132
Query: 147 NKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDE 206
V + + L V+A+ L + S ++ LI GYC +G + +A +
Sbjct: 133 GFVEEGSIEAALRVKARMLEMGCS----ATKVTVNVLINGYCKLGRVEDALGYIQQEIAD 188
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQ 266
GFEP + + + + A+KV +M V+ D + TY IV++ +CK G++ +
Sbjct: 189 GFEPDQITYNTFVNGLCQNDHVGHALKVMDVM-VQEGHDPDVFTYNIVVNCLCKNGQLEE 247
Query: 267 AYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIK 322
A +L +M RG D T +++I L RL EA + ++ PD+ ++ LI
Sbjct: 248 AKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILIN 307
Query: 323 GLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG--HLGKRGRK-----------GPD 369
L ++ A ++F EM GC P TY L+ LGK G+ P
Sbjct: 308 ALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPR 367
Query: 370 PLVNFDTIFVG----------------------------------GLVKAGKSLDAAKYV 395
+ ++TI G GL K K DA + +
Sbjct: 368 STITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELI 427
Query: 396 ERVMNRGVEVPRFDYNKFLHYYSNE 420
++++ G++ YN L +Y +
Sbjct: 428 NQMISEGLQPNNITYNSILTHYCKQ 452
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 158/359 (44%), Gaps = 22/359 (6%)
Query: 6 GHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQK 65
GH ++V ++ Q+ + P+ ++ + +C +C N L L +
Sbjct: 211 GHALKVMDVMVQEGHDPDVFTYNIVVNC-----------LCKNGQLEEAKGILNQMVDRG 259
Query: 66 AQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVREL 124
P + TFN ++ + ++ + +++ + + D TF I + L +V +
Sbjct: 260 CLP----DITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDP 315
Query: 125 KKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKP-NEIAYGWL 183
+ F M + GC N ++ LC + +A L+ + P + I Y +
Sbjct: 316 HLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTI 375
Query: 184 IKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM 243
I G C + EA ++++ M +G + + +I+ K K D+A ++ M + +
Sbjct: 376 IDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGL 435
Query: 244 DDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
+ TY ++ CK+G I +A +LE M G E D +T ++I GL GR + A
Sbjct: 436 QPNNI-TYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVAL 494
Query: 304 KVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
KV+ + +P Y+ +++ L R R+A +FREM + G P TY ++ +G
Sbjct: 495 KVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRG 553
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 99/443 (22%), Positives = 181/443 (40%), Gaps = 91/443 (20%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKT-FKIALMTLAE 120
Y++ + +TFN ++ + ++ + L+EM R + D+T F + E
Sbjct: 77 YSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVE 136
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIA 179
++ + M + GC + +N ++ C+ V +A Y+ ++++ +P++I
Sbjct: 137 EGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQIT 196
Query: 180 YGWLIKGYC----------------------DV-------------GDLIEASKIWNLMT 204
Y + G C DV G L EA I N M
Sbjct: 197 YNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMV 256
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK----------------------- 241
D G P I + +I N+ +EA+ + + + VK
Sbjct: 257 DRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPH 316
Query: 242 -------RMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
M + G + TY +ID +C GK+ +A +L++M G +T ++II
Sbjct: 317 LALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTII 376
Query: 291 YGLLARGRLREAYKVVEEIEKPDIS----LYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
GL + R+ EA +V ++++ IS ++ LI GL + ++ +A ++ +MI G +
Sbjct: 377 DGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQ 436
Query: 347 PTMHTYIMLLQGHLGKRG--RKGPDPL------------VNFDTIFVGGLVKAGKSLDAA 392
P TY +L H K+G +K D L V + T+ + GL KAG++ A
Sbjct: 437 PNNITYNSILT-HYCKQGDIKKAADILETMTANGFEVDVVTYGTL-INGLCKAGRTQVAL 494
Query: 393 KYVERVMNRGVEVPRFDYNKFLH 415
K + + +G+ YN L
Sbjct: 495 KVLRGMRIKGMRPTPKAYNPVLQ 517
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 131/292 (44%), Gaps = 8/292 (2%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIM 134
TFN +++ + K + L +EM D+ T+ + L + +L K ++ M
Sbjct: 301 TFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM 360
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDL 193
GC S N ++ LC++ + EA+ + ++ + I N I + LI G C +
Sbjct: 361 ESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKI 420
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
+A ++ N M EG +P+ + ++ + K +A + + M + + + TY
Sbjct: 421 DDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFE-VDVVTYGT 479
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI---- 309
+I+ +CK G+ A +L M +G+ + ++ L R +R+A + E+
Sbjct: 480 LINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVG 539
Query: 310 EKPDISLYHGLIKGLLRLRRA-REATQVFREMIKRGCEPTMHTYIMLLQGHL 360
E PD Y + +GL R +EA EM+ +G P ++ ML +G L
Sbjct: 540 EPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLL 591
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 76/176 (43%), Gaps = 28/176 (15%)
Query: 278 GIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREA 333
GI+AD + + ++ L+ +++ V E+ KPD+ ++ L+K L R + R A
Sbjct: 49 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 108
Query: 334 TQVFREMIKRGCEPTMHTYIMLLQG---------------HLGKRGRKGPDPLVNFDTIF 378
+ EM RG P T+ L+QG + + G VN +
Sbjct: 109 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVN---VL 165
Query: 379 VGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLR 434
+ G K G+ DA Y+++ + G E + YN F++ G+ + VG L+
Sbjct: 166 INGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVN------GLCQNDHVGHALK 215
>gi|224118166|ref|XP_002317747.1| predicted protein [Populus trichocarpa]
gi|222858420|gb|EEE95967.1| predicted protein [Populus trichocarpa]
Length = 498
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 187/419 (44%), Gaps = 62/419 (14%)
Query: 26 LHSSLSSCNFNLTH-----EFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITF-NR 79
+ S LS + N +H + F+ + N+ L+ RP +T+ + S+ N
Sbjct: 68 VESLLSQLSRNSSHIKCGDDVFISVIRNYGLAGRPRLALKTFTRIKEEFSMQPSVKLLNT 127
Query: 80 MVDIIGKSRNIDLFWETLQEMGRRR--LVNDKTFKIALMTLAEVRELKKMVNFFHIMNDC 137
++++ +++ L TL+ + L N +F I + L + +++ + F M
Sbjct: 128 LLNVFVQNKRYHLVGSTLKNCKDKYGVLPNVFSFNILIKALCKKNDVENALKVFDEMPTM 187
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAK-----------------YLIL--------KLSEW 172
G +L ++ R +V A+ Y +L +LS+
Sbjct: 188 GMIPNLVTYTTILGGFVSRGDLVNAEKVFSEISDKGWLPDATTYTVLMVGYCKQGRLSDA 247
Query: 173 IK-----------PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIET 221
IK PNE+ YG +I YC EA + + M D+ F PS + K+I+
Sbjct: 248 IKVMDNMEYNGVEPNEVTYGVMIDAYCKEKKSGEARNLIDDMLDKKFLPSSTLCCKVIDV 307
Query: 222 FFKINKDDEAMKVFQMMRVKRM--DDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGI 279
+ K + A +++ M K D+ +ST +I W+CK GK+ +A + +E F++G
Sbjct: 308 LCEDGKVENACHLWKRMLEKNCLPDNAIMST---LIHWLCKEGKVWEARKLFDE-FEQGT 363
Query: 280 EADNLTLSSIIYGLLARGRLREAYKV----VEEIEKPDISLYHGLIKGLLRLRRAREATQ 335
+T +++I G+ RG L EA ++ VE+ +P+ Y+ LIKG ++ +E +
Sbjct: 364 IPSLMTYNTLIAGMCERGELNEAGRLWDDMVEKRCRPNAFTYNMLIKGFMKAGVVKEGVR 423
Query: 336 VFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKY 394
+ EM+ GC P TY +L++G L + G +G D V + A + +DA +
Sbjct: 424 ILEEMLDNGCLPNKSTYTLLIEG-LQESGMEG-------DVDKVMSMAMASREVDADSW 474
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 106/453 (23%), Positives = 193/453 (42%), Gaps = 97/453 (21%)
Query: 56 VYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL---VNDKTF- 111
+ F Y K P F+H T++ ++D + ++R D L ++ R D F
Sbjct: 31 AFQIFDYAGKYHPGFSHTYDTYHSIIDKLSRARAFDGVESLLSQLSRNSSHIKCGDDVFI 90
Query: 112 ------------KIALMTLAEVRE----------LKKMVNFF----------HIMNDCGC 139
++AL T ++E L ++N F + +C
Sbjct: 91 SVIRNYGLAGRPRLALKTFTRIKEEFSMQPSVKLLNTLLNVFVQNKRYHLVGSTLKNCKD 150
Query: 140 EY----SLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLI 194
+Y ++ N ++K LC++ V A + ++ + PN + Y ++ G+ GDL+
Sbjct: 151 KYGVLPNVFSFNILIKALCKKNDVENALKVFDEMPTMGMIPNLVTYTTILGGFVSRGDLV 210
Query: 195 EASKIWNLMTDEGFEP--------------------SIDVVDK---------------MI 219
A K+++ ++D+G+ P +I V+D MI
Sbjct: 211 NAEKVFSEISDKGWLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGVMI 270
Query: 220 ETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI-VIDWMCKRGKISQAYTMLEEMFKRG 278
+ + K K EA + M K+ L ST VID +C+ GK+ A + + M ++
Sbjct: 271 DAYCKEKKSGEARNLIDDMLDKKF--LPSSTLCCKVIDVLCEDGKVENACHLWKRMLEKN 328
Query: 279 IEADNLTLSSIIYGLLARGRLREAYKVVEEIEK---PDISLYHGLIKGLLRLRRAREATQ 335
DN +S++I+ L G++ EA K+ +E E+ P + Y+ LI G+ EA +
Sbjct: 329 CLPDNAIMSTLIHWLCKEGKVWEARKLFDEFEQGTIPSLMTYNTLIAGMCERGELNEAGR 388
Query: 336 VFREMIKRGCEPTMHTYIMLLQGHLG----KRGRK--------GPDPLVNFDTIFVGGLV 383
++ +M+++ C P TY ML++G + K G + G P + T+ + GL
Sbjct: 389 LWDDMVEKRCRPNAFTYNMLIKGFMKAGVVKEGVRILEEMLDNGCLPNKSTYTLLIEGLQ 448
Query: 384 KAGKSLDAAKYVERVM-NRGVEVPRFDYNKFLH 415
++G D K + M +R V+ +D FLH
Sbjct: 449 ESGMEGDVDKVMSMAMASREVDADSWDL--FLH 479
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 50/122 (40%), Gaps = 12/122 (9%)
Query: 312 PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR-------- 363
P++ ++ LIK L + A +VF EM G P + TY +L G + +
Sbjct: 156 PNVFSFNILIKALCKKNDVENALKVFDEMPTMGMIPNLVTYTTILGGFVSRGDLVNAEKV 215
Query: 364 ----GRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN 419
KG P T+ + G K G+ DA K ++ + GVE Y + Y
Sbjct: 216 FSEISDKGWLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGVMIDAYCK 275
Query: 420 EE 421
E+
Sbjct: 276 EK 277
>gi|255547147|ref|XP_002514631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546235|gb|EEF47737.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 569
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 153/345 (44%), Gaps = 16/345 (4%)
Query: 25 RLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDII 84
RL+ S N ++T LQ N P + R V F Q+ K F + T + +D
Sbjct: 145 RLNLHFSHINNSITPSIILQTLNLSPDAGRTVLGFHQWLVKVA-NFKNTDETISFFIDYF 203
Query: 85 GKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMN-DCGCEYSL 143
G+ ++ E L + + ++ K F+ + L K++ FF M D G +
Sbjct: 204 GRRKDFQSTHELLCD--SKDVIGYKCFESMVNRLVRAGRATKVMGFFDRMERDYGFKRDR 261
Query: 144 EMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLM 203
E L VVK LC A+ ++ L+ I P+E LIKG+C G L EA ++ M
Sbjct: 262 ENLRLVVKMLCDNGYASYAEKMVKNLANEIFPDENICDLLIKGWCVDGKLDEAKRLAGEM 321
Query: 204 TDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR--VKRMDDLGLS----TYRIVIDW 257
GFE + +++ K+ ++ + K+ + + MD G+ T+ ++I
Sbjct: 322 YRGGFEIGTVAYNAILDCVCKLCREKDPFKIESEVEKVLVEMDTRGVPRNVETFNVLITN 381
Query: 258 MCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE------K 311
+CK K A + M + G + D+ T +I L R+ E ++++ ++ K
Sbjct: 382 LCKMRKTQDALNLFNRMREWGCDPDDTTFLVLIRSLYQAARVGEGDEMIDRMKSSGYGNK 441
Query: 312 PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
D Y+G +K L + R A VF M GC+P + TY +L+
Sbjct: 442 LDKKAYYGFLKILCGIERLEHAVSVFEMMKADGCKPGIKTYDLLI 486
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 82/178 (46%), Gaps = 11/178 (6%)
Query: 70 FAHNSITFNRMVDIIGK-SRNIDLF------WETLQEMGRRRLV-NDKTFKIALMTLAEV 121
F ++ +N ++D + K R D F + L EM R + N +TF + + L ++
Sbjct: 326 FEIGTVAYNAILDCVCKLCREKDPFKIESEVEKVLVEMDTRGVPRNVETFNVLITNLCKM 385
Query: 122 RELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEI--- 178
R+ + +N F+ M + GC+ ++++L Q V E +I ++ N++
Sbjct: 386 RKTQDALNLFNRMREWGCDPDDTTFLVLIRSLYQAARVGEGDEMIDRMKSSGYGNKLDKK 445
Query: 179 AYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
AY +K C + L A ++ +M +G +P I D +I + N+ D+ +F
Sbjct: 446 AYYGFLKILCGIERLEHAVSVFEMMKADGCKPGIKTYDLLIGKWCTRNRVDKGNALFN 503
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 68/151 (45%), Gaps = 8/151 (5%)
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGD 192
M+ G ++E N ++ LC+ + +A L ++ EW P++ + LI+
Sbjct: 363 MDTRGVPRNVETFNVLITNLCKMRKTQDALNLFNRMREWGCDPDDTTFLVLIRSLYQAAR 422
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI----NKDDEAMKVFQMMRVKRMDDLGL 248
+ E ++ + M G+ +D K F KI + + A+ VF+MM+ G+
Sbjct: 423 VGEGDEMIDRMKSSGYGNKLD--KKAYYGFLKILCGIERLEHAVSVFEMMKADGCKP-GI 479
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGI 279
TY ++I C R ++ + + E + G+
Sbjct: 480 KTYDLLIGKWCTRNRVDKGNALFNEALRNGV 510
>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
Length = 670
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 154/350 (44%), Gaps = 23/350 (6%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIM 134
T+ ++D + K+ ID L EM TF + + L + +L + M
Sbjct: 236 TYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNM 295
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDL 193
GC + N ++ LC + + +A L+ ++ S PN + YG +I G G
Sbjct: 296 FLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRA 355
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
++ + + LM + G+ + V +I FK K EAM +F+ M VK + L Y
Sbjct: 356 LDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYE-LNTIVYSA 414
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPD 313
VID +C+ GK A +L EM +G + T SS++ G G A +V +++ K +
Sbjct: 415 VIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHN 474
Query: 314 IS----LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR---- 365
+ Y LI GL + + +EA V+ +M+ +GC+P + Y ++ G L G
Sbjct: 475 FTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMING-LSIAGLVEDA 533
Query: 366 ---------KGPD--PLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVE 404
+GPD P V I + L K A + +++RG +
Sbjct: 534 MQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCD 583
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 153/325 (47%), Gaps = 30/325 (9%)
Query: 103 RRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLE----MLNKVVKTLCQRKL 158
+R++ +K F + + +K V+ F M CE+ + N V+ + Q L
Sbjct: 120 KRVIFEKCFIVIFKAYGKAHLPEKAVDLFDRM---ACEFECKRTGKSFNSVLNVIIQEGL 176
Query: 159 VVEA----KYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDV 214
A ++I I PN + + +IK C VG + +A +++ MT EP +
Sbjct: 177 FHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYT 236
Query: 215 VDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEM 274
+++ K ++ DEA+ + M++ + T+ ++I+ +CK+G +S+A +++ M
Sbjct: 237 YCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPV-TFNVLINGLCKKGDLSRAAKLVDNM 295
Query: 275 FKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRA 330
F +G + +T +++I+GL +G+L +A +++ + P++ Y +I GL++ RA
Sbjct: 296 FLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRA 355
Query: 331 REATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTI 377
+ V M +RG + Y L+ G L K G+ KG + +
Sbjct: 356 LDGACVLALMEERGYCVNEYVYSTLISG-LFKEGKSQEAMHLFKEMTVKGYELNTIVYSA 414
Query: 378 FVGGLVKAGKSLDAAKYVERVMNRG 402
+ GL + GK DA + + + N+G
Sbjct: 415 VIDGLCRDGKPDDAVEVLSEMTNKG 439
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 110/232 (47%), Gaps = 9/232 (3%)
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
N I Y +I G C G +A ++ + MT++G P+ +++ FF+ A++V+
Sbjct: 408 NTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVW 467
Query: 236 QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
+ M K Y ++I +CK GK+ +A + +M +G + D + SS+I GL
Sbjct: 468 KDM-AKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSI 526
Query: 296 RGRLREAYKVVEEI------EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
G + +A ++ E+ +PD+ Y+ L+ L + A + M+ RGC+P +
Sbjct: 527 AGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDL 586
Query: 350 HTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNR 401
T + L+ + + P F V L+K + L A+K VE ++ +
Sbjct: 587 VTCTIFLR--MLREKLDPPQDGREFLDELVVRLLKRQRVLGASKIVEVMLQK 636
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 116/255 (45%), Gaps = 35/255 (13%)
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQ 266
P++ + +I+ K+ D+A++VF+ M +++ + + TY ++D +CK +I +
Sbjct: 194 SISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEP-DVYTYCTLMDGLCKADRIDE 252
Query: 267 AYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIK 322
A ++L+EM G +T + +I GL +G L A K+V+ + P+ Y+ LI
Sbjct: 253 AVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIH 312
Query: 323 GLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGL 382
GL + +A + M+ C P + TY + GL
Sbjct: 313 GLCLKGKLEKAISLLDRMVSSKCVPNVVTY-----------------------GTIINGL 349
Query: 383 VKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY----SNEEGVVMFEEV---GKKLRE 435
VK G++LD A + + RG V + Y+ + ++E + +F+E+ G +L
Sbjct: 350 VKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNT 409
Query: 436 VGLADLADIFQRYGK 450
+ + + D R GK
Sbjct: 410 IVYSAVIDGLCRDGK 424
>gi|449437886|ref|XP_004136721.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like [Cucumis sativus]
gi|449501176|ref|XP_004161299.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like [Cucumis sativus]
Length = 1037
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/420 (21%), Positives = 176/420 (41%), Gaps = 64/420 (15%)
Query: 26 LHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIG 85
+ +L +C+ + E ++I L + FF + K QP + H + T+N + I G
Sbjct: 636 IKKALENCSVEFSPELVIEILRKCSLDGCAAFNFFAWVGK-QPGYNHTTETYNMAIKIAG 694
Query: 86 KSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLE 144
++ EM RR + T+ I +M A + + + M +
Sbjct: 695 LGKDFKHMRSLFYEMRRRGCSITPYTWTIMIMQYARAGLTEIALKSYEEMKEIN------ 748
Query: 145 MLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVG--DLIEASKIWNL 202
IKPN Y +LI C+ + EA ++
Sbjct: 749 ----------------------------IKPNANTYKYLIMSLCESKRRKVDEAITLFQE 780
Query: 203 MTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS---TYRIVIDWMC 259
M + P ++++ + K+++ +A K +R +G S TY + I +C
Sbjct: 781 MIHSKYIPDKELLETYLGCLCKLSRLSDAKKCIDHLR-----KVGFSIPLTYSLYIRALC 835
Query: 260 KRGKISQAYTMLEEMF-KRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDI 314
+ K+ +A T+LEE+ + D+ S++YGLL GR EA + +++ P +
Sbjct: 836 RARKLDEALTLLEEVVGDERSKLDSYIYGSLVYGLLQTGRTEEALAKMNSMKQVGINPTV 895
Query: 315 SLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH--LGK---------- 362
+Y I + ++ R A ++ +M++ GCEP++ TY ++ G+ +GK
Sbjct: 896 HVYTSFIVYSFKEKQTRRALEILAKMLQEGCEPSIATYSAIVHGYMNMGKVCEAWKVFNY 955
Query: 363 RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEG 422
+ GP P T+ + L KAG+S +A + + ++N G+ ++ + + N EG
Sbjct: 956 MKKYGPSPDFKAYTMLISCLCKAGRSEEALEIISDMLNNGIAPSSINFRTVI-FGLNREG 1014
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 80/375 (21%), Positives = 153/375 (40%), Gaps = 80/375 (21%)
Query: 40 EFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQE 99
E L+ C FP FF + K++ F + FN ++ I G++R+ L + L+E
Sbjct: 163 EKVLKRCFKFP---HLALGFFNWV-KSRDGFQCTTNVFNTVLSIAGEARDFKLIDKLLEE 218
Query: 100 MGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHIMNDCGCE----------YSL----- 143
M L+ D KT+ I + + K + + M + GCE SL
Sbjct: 219 MESYSLLKDIKTWTILISLYGNAKLTGKSLMVYSKMKESGCEPDGVVYKTLICSLSAAGK 278
Query: 144 -EMLNKVVKTLCQRKL-VVEAKYLILKLSEWIKPNEIA--------------------YG 181
E+ + + + ++ + VV+ K + LS + A Y
Sbjct: 279 PELAMEFYQEMAKKGISVVDMKMCKMLLSSLAGSGDTASVLDIAKDMVALFNVQERDVYH 338
Query: 182 WLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK 241
+++K +C + EA + + +G + + +I + N+ ++A+++ + +K
Sbjct: 339 YILKSFCISRRIKEALEFIRDLNSKGIVLDSEYFEILIGGLCRANRIEDALELINI--IK 396
Query: 242 RMDDLGLSTYRIVIDWMCKRGKISQA------------------YTML------------ 271
R D+ Y I+I+W ++ ++S+A YT L
Sbjct: 397 RKGDVDGKIYGIIINWYLRKNEVSKALDLFQNMKEMGYFPTTSTYTQLMQHLFSLAEYEK 456
Query: 272 -----EEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-KPDISLYHGLIKGLL 325
+EM ++GIE D + + +++ G + + R+ EA+ V +E KP I+ L
Sbjct: 457 GFELYKEMLEKGIELDTVAIMTVVVGNVRQNRITEAWNVFRTMENKPTWKSCSVFIRELF 516
Query: 326 RLRRAREATQVFREM 340
R+ R E +V EM
Sbjct: 517 RISRTDEIVKVLNEM 531
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Query: 196 ASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVI 255
A +I M EG EPSI ++ + + K EA KVF M+ K Y ++I
Sbjct: 914 ALEILAKMLQEGCEPSIATYSAIVHGYMNMGKVCEAWKVFNYMK-KYGPSPDFKAYTMLI 972
Query: 256 DWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
+CK G+ +A ++ +M GI ++ ++I+GL G+ A V+++
Sbjct: 973 SCLCKAGRSEEALEIISDMLNNGIAPSSINFRTVIFGLNREGKHVLARDVLQQ 1025
>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
Length = 480
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 187/415 (45%), Gaps = 41/415 (9%)
Query: 22 PESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMV 81
P + L+++L SC +C L+ YL + Q C A N +++N ++
Sbjct: 62 PNAILYNNLISC-----------LCKAGMLAEAESYL----KRMPQHC-APNVVSYNIII 105
Query: 82 DIIGKSRNID---LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCG 138
D K+RNI+ F ++E+G + + + + + K ++ F M G
Sbjct: 106 DGYCKARNIEKALAFLREMEELGHPP--TPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKG 163
Query: 139 CEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEAS 197
CE + N ++ L + + + EA+ L + S KP+ + Y +I G C L EA
Sbjct: 164 CEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAV 223
Query: 198 KIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS-TYRIVID 256
+ M E P+ +I+ K + +A +VF+ M + + I+I+
Sbjct: 224 FLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILIN 283
Query: 257 WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA----YKVVEEIEKP 312
+CK + +A M +EM RGI +T ++++ GLL+ +L++A Y +++++ P
Sbjct: 284 GLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAP 343
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK------ 366
++ Y LI L + + EA ++ M +G P++ + +LL L + GR
Sbjct: 344 NMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLL-SRLARAGRLDDAFEL 402
Query: 367 -------GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
LV I + G+++ G +A +++++ + G+ +F Y+K +
Sbjct: 403 YKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLV 457
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 137/315 (43%), Gaps = 48/315 (15%)
Query: 87 SRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEML 146
S+ +D+F E + +VN F + L L R++ + F MN GC+ +
Sbjct: 150 SKAMDVFAEMPAKGCEPDIVN---FNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTY 206
Query: 147 NKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N ++ LC+ K + EA +L+ ++ E + P + Y LI C L +A +++ M +
Sbjct: 207 NTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAE 266
Query: 206 ---EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR---------------------VK 241
EP+ V+ +I K + EA ++FQ MR K
Sbjct: 267 GPCPCTEPAYSVL-ILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAK 325
Query: 242 RMDDLGLS-------------TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
D + L+ TY I+I +CK ++ +A+ +L M +G +L +
Sbjct: 326 LQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGF-VPSLKIWE 384
Query: 289 IIYGLLAR-GRLREAYKVVEEIEKPDISLYHG----LIKGLLRLRRAREATQVFREMIKR 343
++ LAR GRL +A+++ +E+ + + G L+ G+LR EA ++M
Sbjct: 385 VLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDT 444
Query: 344 GCEPTMHTYIMLLQG 358
G P TY L+ G
Sbjct: 445 GIVPDKFTYDKLVVG 459
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 112/240 (46%), Gaps = 7/240 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMT--LAEVRELKKMVNFF 131
+T+ ++D + K + +E ++M + + + ++ L + R + F
Sbjct: 239 VTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMF 298
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDV 190
M G ++ N +++ L + +A L L + PN Y LI C
Sbjct: 299 QEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKT 358
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLS 249
+ EA K+ + M D+GF PS+ + + ++ + + D+A +++ +M R+ +G S
Sbjct: 359 DQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSS 418
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
I++D + +RG + +A L++M GI D T ++ GL +G+ +A K+VEE+
Sbjct: 419 N--ILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEEL 476
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 132/300 (44%), Gaps = 52/300 (17%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
+KP + Y LI GYCD G L A + M + G ++ + ++ F + EA
Sbjct: 253 VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAY 312
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
++ + M K + L + TY I+I+ CK G + +A + E M +RG+ A +T +S+IY
Sbjct: 313 ELVEEMGGKGLA-LDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYA 371
Query: 293 LLARGRLRE-----------------------------------AYKVVEEIEK----PD 313
L +G+++E A++++ E+EK PD
Sbjct: 372 LSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPD 431
Query: 314 ISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG--------- 364
Y+ L++GL L R EA ++ EM KRG +P + TY L+ G+ K
Sbjct: 432 DVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRN 491
Query: 365 ---RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEE 421
KG +P + + GL K G+ DA V+ ++ G+ Y + + E+
Sbjct: 492 EMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTED 551
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 106/224 (47%), Gaps = 9/224 (4%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDE 206
N +++ LC A L L + +PN + Y +I G+C G + A I M +
Sbjct: 158 NIMLRHLCSAGKPARALEL---LRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRER 214
Query: 207 -GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKIS 265
G P+ +I + K+ + DEA+KVF M K Y +I C +GK+
Sbjct: 215 GGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLD 274
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISL----YHGLI 321
A + M +RG+ T + +++ L GR EAY++VEE+ ++L Y+ LI
Sbjct: 275 TALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILI 334
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
G + ++A ++F M +RG T+ TY L+ L K+G+
Sbjct: 335 NGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYA-LSKKGQ 377
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 106/229 (46%), Gaps = 9/229 (3%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRR----RLVNDKTFKIALMTLAEVRELK 125
A + T+N +++ K N+ E + M RR +V + AL +V+E
Sbjct: 323 LALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETD 382
Query: 126 KMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLI 184
K+ F G L + N ++ + + A ++ ++ + I P+++ Y L+
Sbjct: 383 KL---FDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLM 439
Query: 185 KGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD 244
+G C +G + EA K+ + MT G +P + + +I + +A+++ M K +
Sbjct: 440 RGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFN 499
Query: 245 DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
L TY +I +CK G+ A M++EM + GI D+ T S+I GL
Sbjct: 500 PT-LLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 547
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 78/180 (43%), Gaps = 29/180 (16%)
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKR-GIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY VI C RG++ A ++ EM +R GI + T ++I G GR+ EA KV +E
Sbjct: 187 TYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDE 246
Query: 309 I-----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
+ KP+ +Y+ LI G + A M++RG T+ TY +L
Sbjct: 247 MLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLL-------- 298
Query: 364 GRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGV 423
V L G+ +A + VE + +G+ + F YN ++ + E V
Sbjct: 299 ---------------VHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNV 343
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 95/225 (42%), Gaps = 28/225 (12%)
Query: 241 KRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
RM L L + + + A+ + +MF+ + T + ++ L + G+
Sbjct: 112 SRMKSLSLPISTASLHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPA 171
Query: 301 EAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKR-GCEPTMHTYIMLLQG- 358
A +++ ++ +P+ Y+ +I G R + A + REM +R G P +TY ++ G
Sbjct: 172 RALELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGW 231
Query: 359 -HLGK-------------RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVE 404
+G+ +G P+ ++ +GG GK A Y +R++ RGV
Sbjct: 232 CKVGRVDEAVKVFDEMLTKGEVKPEAVMY--NALIGGYCDQGKLDTALLYRDRMVERGVA 289
Query: 405 VPRFDYNKFLHYY----SNEEGVVMFEEVGKKLREVGLADLADIF 445
+ YN +H E + EE+G K GLA D+F
Sbjct: 290 MTVATYNLLVHALFMDGRGTEAYELVEEMGGK----GLA--LDVF 328
>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
Length = 577
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 167/369 (45%), Gaps = 26/369 (7%)
Query: 61 QYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK------TFKIA 114
Q+ + C + N IT+N +V+ + K+ ID E +M +R + ++
Sbjct: 56 QFKSMGEEC-SPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTV 114
Query: 115 LMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWI 173
+ L + + + K +F M GC ++ + ++ LC+ V EA L+++L E +
Sbjct: 115 IDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDM 174
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
P + Y ++ G+ G E ++ M ++GF +I + M+ +K ++ ++A +
Sbjct: 175 VPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQ 234
Query: 234 VFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
F+ + +K + TY + + +CK GK+ +AY +L EM + + D +T SSII G
Sbjct: 235 FFERL-LKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGF 293
Query: 294 LARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
GR+ +A V + P + L+ G +++REA +V +M+ G P +
Sbjct: 294 CKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGL 353
Query: 350 HTYIMLLQGHLG------------KRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVER 397
TY +L+ G K RK P N + L +A + +D AK
Sbjct: 354 QTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRA-RRVDEAKEFLD 412
Query: 398 VMNRGVEVP 406
VM VP
Sbjct: 413 VMEADNVVP 421
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 68/116 (58%), Gaps = 8/116 (6%)
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA---YKVVE 307
Y VI+ CK G++ QA+ +L+EM +RG++ D L S++I GL +GR+ EA +K +
Sbjct: 2 YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 61
Query: 308 EIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKR-----GCEPTMHTYIMLLQG 358
E P++ Y+ ++ GL + R E ++F +M KR GCEP + +Y ++
Sbjct: 62 EECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDA 117
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/313 (20%), Positives = 138/313 (44%), Gaps = 36/313 (11%)
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDL 193
M + G + + + + +++ LC++ + EA + E PN I Y ++ G C +
Sbjct: 25 MKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEECSPNVITYNTVVNGLCKANRI 84
Query: 194 IEASKIWNLM-----TDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
E ++++ M G EP + +I+ K + D+A + F KRM +G
Sbjct: 85 DEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYF-----KRMRAVGC 139
Query: 249 S----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK 304
+ TY +ID +CK ++ +AY++L ++ + + ++++ G +G+ E +
Sbjct: 140 APNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGKPSECLE 199
Query: 305 VVEEIEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL 360
++ +++ + ++ ++ L + +A Q F ++K G +P + TY + + G L
Sbjct: 200 LLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHG-L 258
Query: 361 GKRGRKG---------------PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEV 405
K G+ PD ++ + +I + G KAG+ A R+M
Sbjct: 259 CKAGKVDEAYRILLEMVESKVTPD-VITYSSI-IDGFCKAGRMDKADDVFTRMMVHECIP 316
Query: 406 PRFDYNKFLHYYS 418
+ LH +S
Sbjct: 317 HPVTFMTLLHGFS 329
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 125/311 (40%), Gaps = 62/311 (19%)
Query: 106 VNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYL 165
+N F L L + E +K FF + G + ++ N V LC+ V EA +
Sbjct: 211 INIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRI 270
Query: 166 ILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLM--------------------- 203
+L++ E + P+ I Y +I G+C G + +A ++ M
Sbjct: 271 LLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSE 330
Query: 204 --------------TDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGL 248
+ GF P + + +++ + + A++++ +M R KR D
Sbjct: 331 HKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDA-- 388
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV--- 305
+TY +I +C+ ++ +A L+ M + + +++ L +G + EA V
Sbjct: 389 NTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDN 448
Query: 306 -------------VEEIE-------KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGC 345
VE IE +PD + Y +++ L L R A F +M RGC
Sbjct: 449 VVEICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGC 508
Query: 346 EPTMHTYIMLL 356
P + TY +L+
Sbjct: 509 APGLVTYTLLI 519
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 91/202 (45%), Gaps = 42/202 (20%)
Query: 131 FHIMNDCGC-----EYSLEMLNK---------------VVKTLCQRKLVVEAK-YLILKL 169
++++ DC C E +LE+ +K +++ LC+ + V EAK +L +
Sbjct: 356 YNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVME 415
Query: 170 SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD 229
++ + PN L++ C G++ EA V+D ++E K + D
Sbjct: 416 ADNVVPNGAICHALVEVLCKQGEVDEACS---------------VLDNVVE-ICKAGEPD 459
Query: 230 EAMKVFQMMRVK--RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLS 287
EA++V + M +K R D+ +TY V+ +C ++ A E+M RG +T +
Sbjct: 460 EAVEVIEQMVLKGVRPDE---ATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYT 516
Query: 288 SIIYGLLARGRLREAYKVVEEI 309
+I + +A+++ E +
Sbjct: 517 LLIGEACSADMADDAFRIFEAM 538
>gi|357167657|ref|XP_003581270.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Brachypodium distachyon]
Length = 560
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 143/310 (46%), Gaps = 26/310 (8%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
+F +A+ + +V +++K + M + GC N +V LC+ K V + ++ +L
Sbjct: 230 SFNVAIKGVCQVGDVQKALELVERMAEFGCSPDTVTNNILVGGLCRVKEVSRGREVLRRL 289
Query: 170 SE--WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINK 227
PN + Y +I GYC G + +A ++N M G P+ + +I + K
Sbjct: 290 QRDGVCMPNVVTYTSVISGYCKSGRMEDAMAVYNDMIGCGTTPNAVTYNVLINGYGKAGN 349
Query: 228 DDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLS 287
A+ V+Q M ++R + T+ +ID C+ G++ A EM + I+ + T S
Sbjct: 350 MGSAVAVYQQMILRRCPP-DVVTFSTLIDGYCRCGQLDDAMRTWTEMSQYQIQPNAHTFS 408
Query: 288 SIIYGLLARGRLREAYKVVEEIE-----KPDISLYHGLIKGLLRLRRAREATQVFREMIK 342
II + R EA + ++E+ P + + +I L + + EA + EM
Sbjct: 409 IIILSFCKQNRSAEALRFLKELNMRTDIAPRAFICNPVIDVLCKGGKVDEANLILMEMEG 468
Query: 343 RGCEPTMHTYIMLLQGHLGKRGR---------KGPDPLVNFDTI----FVGGLVKAGKSL 389
+GC P +TY +L+ GH K GR K D + D+I F+G L+KAG
Sbjct: 469 KGCRPDKYTYTILIIGHCMK-GRISEAITFFNKMVDTGCSPDSITVNSFIGCLLKAGMPS 527
Query: 390 DAAKYVERVM 399
+ V+R+M
Sbjct: 528 E----VDRIM 533
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 82/170 (48%), Gaps = 8/170 (4%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+ + + LI GYC G L +A + W M+ +P+ +I +F K N+ EA++
Sbjct: 367 PDVVTFSTLIDGYCRCGQLDDAMRTWTEMSQYQIQPNAHTFSIIILSFCKQNRSAEALRF 426
Query: 235 FQMMRVKRMDDLGLSTY--RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
+ + ++ D+ + VID +CK GK+ +A +L EM +G D T + +I G
Sbjct: 427 LKELNMR--TDIAPRAFICNPVIDVLCKGGKVDEANLILMEMEGKGCRPDKYTYTILIIG 484
Query: 293 LLARGRLREAY----KVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFR 338
+GR+ EA K+V+ PD + I LL+ E ++ +
Sbjct: 485 HCMKGRISEAITFFNKMVDTGCSPDSITVNSFIGCLLKAGMPSEVDRIMK 534
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 99/228 (43%), Gaps = 12/228 (5%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIK-----PNEIAYGWLIKGYCDVGD 192
GC NK++ + V +A L WI+ P+ ++ IKG C VGD
Sbjct: 187 GCCVEAYAYNKLMNSFIGCGRVQDAVAL---FEGWIQGGAYSPDVWSFNVAIKGVCQVGD 243
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ +A ++ M + G P + ++ ++ + +V + ++ + + TY
Sbjct: 244 VQKALELVERMAEFGCSPDTVTNNILVGGLCRVKEVSRGREVLRRLQRDGVCMPNVVTYT 303
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI--- 309
VI CK G++ A + +M G + +T + +I G G + A V +++
Sbjct: 304 SVISGYCKSGRMEDAMAVYNDMIGCGTTPNAVTYNVLINGYGKAGNMGSAVAVYQQMILR 363
Query: 310 -EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
PD+ + LI G R + +A + + EM + +P HT+ +++
Sbjct: 364 RCPPDVVTFSTLIDGYCRCGQLDDAMRTWTEMSQYQIQPNAHTFSIII 411
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 74/166 (44%), Gaps = 3/166 (1%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHI 133
+TF+ ++D + +D T EM + ++ N TF I +++ + + + F
Sbjct: 370 VTFSTLIDGYCRCGQLDDAMRTWTEMSQYQIQPNAHTFSIIILSFCKQNRSAEALRFLKE 429
Query: 134 MN-DCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVG 191
+N + N V+ LC+ V EA +++++ + +P++ Y LI G+C G
Sbjct: 430 LNMRTDIAPRAFICNPVIDVLCKGGKVDEANLILMEMEGKGCRPDKYTYTILIIGHCMKG 489
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQM 237
+ EA +N M D G P V+ I K E ++ ++
Sbjct: 490 RISEAITFFNKMVDTGCSPDSITVNSFIGCLLKAGMPSEVDRIMKI 535
>gi|326499175|dbj|BAK06078.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 566
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 155/328 (47%), Gaps = 23/328 (7%)
Query: 76 TFNRMVDI-IGKSRNID---LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFF 131
+N+++D+ IG R D LF +Q G + +F + + + +V +++K +
Sbjct: 200 AYNKLMDLFIGHGRVQDAVALFEGWIQ--GGVYSPDVWSFNVVIKGVCKVGDVQKALELV 257
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE--WIKPNEIAYGWLIKGYCD 189
M++ GC N +V LC+ K V + + ++ +L PN + Y +I GYC
Sbjct: 258 ERMDEFGCSPDTVTHNILVNGLCRAKEVSKGREVLRRLQRDGVCMPNVVTYTSVISGYCK 317
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR-MDDLGL 248
G + +A ++N M G P++ + +I + K A+ V+Q M ++R + D +
Sbjct: 318 AGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSAVAVYQQMILRRCLPD--V 375
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
T+ +ID C+ G++ A + EM + I+ + T II+ + R EA +++
Sbjct: 376 VTFSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAHTFCIIIHTFCKQNRSGEALHFLKK 435
Query: 309 IE-----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
+ P +Y+ +I L + + EA + EM ++GC P +TY +L+ GH K
Sbjct: 436 MNMRTDIAPQAFIYNPVIDVLCKGGKVDEANMILIEMEEKGCRPDKYTYTILIIGHCMK- 494
Query: 364 GRKGPDPLVNFDTIFVGGLVKAGKSLDA 391
GR + F +V+ G S D+
Sbjct: 495 GR------IAEAVTFFHKMVETGCSPDS 516
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 81/168 (48%), Gaps = 4/168 (2%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+ + + LI GYC G L +A KIW M +P+ +I TF K N+ EA+
Sbjct: 373 PDVVTFSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAHTFCIIIHTFCKQNRSGEALHF 432
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
+ M ++ Y VID +CK GK+ +A +L EM ++G D T + +I G
Sbjct: 433 LKKMNMRTDIAPQAFIYNPVIDVLCKGGKVDEANMILIEMEEKGCRPDKYTYTILIIGHC 492
Query: 295 ARGRLREA----YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFR 338
+GR+ EA +K+VE PD + + I LL+ E + R
Sbjct: 493 MKGRIAEAVTFFHKMVETGCSPDSIVVNSFISCLLKSGMPGEVDHIMR 540
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 104/239 (43%), Gaps = 13/239 (5%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIK-----PNEIAYGWLIKGYCDVGD 192
GC NK++ V +A L WI+ P+ ++ +IKG C VGD
Sbjct: 193 GCSIEAYAYNKLMDLFIGHGRVQDAVAL---FEGWIQGGVYSPDVWSFNVVIKGVCKVGD 249
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ +A ++ M + G P + ++ + + + +V + ++ + + TY
Sbjct: 250 VQKALELVERMDEFGCSPDTVTHNILVNGLCRAKEVSKGREVLRRLQRDGVCMPNVVTYT 309
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI--- 309
VI CK G++ A + +M G + +T + +I G G + A V +++
Sbjct: 310 SVISGYCKAGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSAVAVYQQMILR 369
Query: 310 -EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKG 367
PD+ + LI G R + +A +++ EM + +P HT+ +++ K+ R G
Sbjct: 370 RCLPDVVTFSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAHTFCIIIHT-FCKQNRSG 427
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 82/222 (36%), Gaps = 54/222 (24%)
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG----------------- 292
+YR VI MC+ G+ + A + ++M + N S + G
Sbjct: 129 SYRYVISLMCQSGRHTDALQLFDQMTDQSGYFPNARFLSFLSGSCAAAGLLDAAAALLSK 188
Query: 293 -------------------LLARGRLREAYKVVEE-----IEKPDISLYHGLIKGLLRLR 328
+ GR+++A + E + PD+ ++ +IKG+ ++
Sbjct: 189 ASQFGCSIEAYAYNKLMDLFIGHGRVQDAVALFEGWIQGGVYSPDVWSFNVVIKGVCKVG 248
Query: 329 RAREATQVFREMIKRGCEPTMHTYIMLLQGHL-GKRGRKGPD------------PLVNFD 375
++A ++ M + GC P T+ +L+ G K KG + P V
Sbjct: 249 DVQKALELVERMDEFGCSPDTVTHNILVNGLCRAKEVSKGREVLRRLQRDGVCMPNVVTY 308
Query: 376 TIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
T + G KAG+ DA ++ G YN ++ Y
Sbjct: 309 TSVISGYCKAGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGY 350
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 138/279 (49%), Gaps = 7/279 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHI 133
+T+N +++ + K + + E EM R + D TF + + + K V F +
Sbjct: 569 VTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEM 628
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGD 192
M + + N ++ C+ + + L + S I PN I+YG LI GYC++G
Sbjct: 629 MIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGC 688
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ EA ++W+ M ++GFE +I + +++ + + +A + M +K + G+ TY
Sbjct: 689 VSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGI-TYN 747
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA----YKVVEE 308
+I+ K + +A+ ++ +M G+ D +T + I+ G +GR++EA K++E
Sbjct: 748 TLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIER 807
Query: 309 IEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
PD S Y LI G + +EA +V EM++RG P
Sbjct: 808 GVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVP 846
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/436 (20%), Positives = 176/436 (40%), Gaps = 87/436 (19%)
Query: 90 IDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNK 148
+DL WE QE+ R + VN T I + L + ++++ +F M + G + N
Sbjct: 339 VDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNT 398
Query: 149 VVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVG---------------- 191
++ C++ L+ EA L+ +S + +KP Y +I G C G
Sbjct: 399 LINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIG 458
Query: 192 -------------------DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
++++A +I++ M +G P + +I K D+A+
Sbjct: 459 MSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQAL 518
Query: 233 KVFQMMR---------------------------VKRMDD-------LGLSTYRIVIDWM 258
K F+ M+ +K D+ L + TY +++ +
Sbjct: 519 KYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGL 578
Query: 259 CKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDI 314
CK +S+A + EM +RG+ D T +++I G G + +A + E + KPD+
Sbjct: 579 CKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDV 638
Query: 315 SLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG------------K 362
Y+ LI G + + +++ +MI R P +Y +L+ G+ +
Sbjct: 639 VTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDE 698
Query: 363 RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEG 422
KG + + V G +AG ++ A +++ ++ +G+ YN ++ + EE
Sbjct: 699 MVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEEN 758
Query: 423 VVMFEEVGKKLREVGL 438
+ + K+ GL
Sbjct: 759 MDRAFALVNKMENSGL 774
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 89/403 (22%), Positives = 178/403 (44%), Gaps = 47/403 (11%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTL 118
F P F H+ +F+ M+ I+ +SR RL + + + ++
Sbjct: 221 FIDSITSNCPNFKHSLQSFSAMIHILVRSR---------------RLPDAQAVILRMVRK 265
Query: 119 AEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA--KYLILKLSEWIKPN 176
+ V ++ + + +CG + + +V+T Q + + E + +LK S+ + +
Sbjct: 266 SGVSRVEIVESLVLTYGNCGSNPLV--FDLLVRTYVQARKLREGCEAFRVLK-SKGLCVS 322
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
A L+ G VG + A +I+ + G + ++ ++ MI K N+ E K F
Sbjct: 323 INACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCK-NQKIENTKSF- 380
Query: 237 MMRVKRMDDLGL----STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
+ M++ G+ TY +I+ C++G + +A+ +++ M +G++ T ++II G
Sbjct: 381 ---LSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIING 437
Query: 293 LLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
L G+ A V++E+ K PD + Y+ L+ R +A ++F EM +G P
Sbjct: 438 LCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPD 497
Query: 349 MHTYIMLLQGHLGKRG-------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYV 395
+ ++ L+ G L K G G P TI +GG + G +A K
Sbjct: 498 LVSFSALI-GLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVR 556
Query: 396 ERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
+ ++ +G + YN L+ E+ + +E+ ++ E G+
Sbjct: 557 DEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGV 599
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 99/211 (46%), Gaps = 3/211 (1%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHI 133
+T+N ++D K ++ E +M RR+ N ++ I + + + + +
Sbjct: 639 VTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDE 698
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDVGD 192
M + G E ++ N +VK C+ V+A ++L L + I P+ I Y LI G+ +
Sbjct: 699 MVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEEN 758
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ A + N M + G P + + ++ F + + EA ++ + ++R + STY
Sbjct: 759 MDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEA-ELIMLKMIERGVNPDRSTYT 817
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADN 283
+I+ + + +A+ + +EM +RG D+
Sbjct: 818 SLINGHVTQNNLKEAFRVHDEMLQRGFVPDD 848
>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
Length = 550
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 124/239 (51%), Gaps = 14/239 (5%)
Query: 123 ELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYG 181
+L F M + G ++ N ++ LCQ + V+EA+ L+ ++ + + PN I+Y
Sbjct: 271 KLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYN 330
Query: 182 WLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK 241
LI GYC +G+L +AS ++N M G PS+ + +I F ++ + V M+R
Sbjct: 331 TLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGF---SEAKNSAGVTDMVR-- 385
Query: 242 RMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
M+ GLS TY I++D + + I +A+ + M K G+ AD +I+GL G
Sbjct: 386 EMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVG 445
Query: 298 RLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
++EA K+ + ++ KP+ +Y+ +I G + + A ++ +EM + G P + +Y
Sbjct: 446 DMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASY 504
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 139/327 (42%), Gaps = 9/327 (2%)
Query: 37 LTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWET 96
L HE I N S P F Q S TFN ++ ++ KS + W
Sbjct: 83 LIHE---AIINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRV 139
Query: 97 LQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQR 156
E ++ +F I + EV L K M + G ++ + ++ C+
Sbjct: 140 FNETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKN 199
Query: 157 KLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVV 215
+ K L K+ E + N+ Y LI G+ +G + +++ M G P++
Sbjct: 200 GDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTY 259
Query: 216 DKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMF 275
+ MI K + A ++F MR +R + TY +I +C+ ++ +A ++ M
Sbjct: 260 NSMICRCCNDGKLNNAFELFDEMR-ERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMK 318
Query: 276 KRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAR 331
+ G+ + ++ +++I G + G L +A + ++ + P ++ Y+ LI G + +
Sbjct: 319 RDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSA 378
Query: 332 EATQVFREMIKRGCEPTMHTYIMLLQG 358
T + REM RG P+ TY +L+
Sbjct: 379 GVTDMVREMEARGLSPSKVTYTILMDA 405
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 103/234 (44%), Gaps = 20/234 (8%)
Query: 201 NLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCK 260
N M G P + + ++ K N ++A +VF K L + ++ I+I C+
Sbjct: 106 NQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFN--ETKGNVKLDVYSFGIMIKGCCE 163
Query: 261 RGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDIS----L 316
G + + + +L +M + G+ + + +++I G G + ++ ++ + D+
Sbjct: 164 VGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYT 223
Query: 317 YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL-----QGHLGK--------R 363
Y LI G ++ ++ +++ +M G P ++TY ++ G L R
Sbjct: 224 YTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMR 283
Query: 364 GRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
R +V ++T+ +GGL + + L+A + + R+ G+ YN + Y
Sbjct: 284 ERGVACNVVTYNTL-IGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGY 336
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 12/194 (6%)
Query: 58 LFFQYTQKAQ-PCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIAL 115
LF Q Q P A T+N ++ +++N + ++EM R L K T+ I +
Sbjct: 348 LFNQMKSSGQSPSLA----TYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILM 403
Query: 116 MTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IK 174
L ++K + M G + + ++ LC + EA L L E +K
Sbjct: 404 DALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLK 463
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
PN++ Y +I GYC G A ++ M + G P++ + I K K EA
Sbjct: 464 PNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEA--- 520
Query: 235 FQMMRVKRMDDLGL 248
+ +K M +LGL
Sbjct: 521 --EVLLKDMIELGL 532
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 80/189 (42%), Gaps = 15/189 (7%)
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE---KPDISLYHGLIK 322
QA +M RG+ + T ++++ L+ +A++V E + K D+ + +IK
Sbjct: 100 QALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNETKGNVKLDVYSFGIMIK 159
Query: 323 GLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG----KRGRKGPDPLVNFD--- 375
G + + +V +M + G P + Y L+ G +RG++ + D
Sbjct: 160 GCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVA 219
Query: 376 -----TIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVG 430
T+ + G K G D + E++ G+ + YN + N+ + E+
Sbjct: 220 NQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELF 279
Query: 431 KKLREVGLA 439
++RE G+A
Sbjct: 280 DEMRERGVA 288
>gi|410109913|gb|AFV61036.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
aristata]
Length = 431
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 139/288 (48%), Gaps = 41/288 (14%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T + L L +++ K + F+ + +CG SL N ++ C+ + A+ + +
Sbjct: 109 TCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAI 168
Query: 170 SEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++W ++P+ ++Y L+ GY +GDL E ++ + M G +P + +I K +K
Sbjct: 169 TKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKM 228
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
D+A ++F M VK + G+ T+ +ID CK G++ A + ++M + + D +T ++
Sbjct: 229 DDANELFDEMLVKGLVPNGV-TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 287
Query: 289 IIYGLLARGRLREAYKVVEEIE----KPD------------------------------- 313
+IYGL +G L++A+ +++E+ KPD
Sbjct: 288 LIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQEN 347
Query: 314 ISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
I L Y LI GL + R+ +A ++ REM+ G +P TY M++
Sbjct: 348 IRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIIN 395
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 100/215 (46%), Gaps = 6/215 (2%)
Query: 149 VVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEG 207
++ LC+ + +A L + L + + PN + + LI G+C G + A +I+ M +
Sbjct: 218 LINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 277
Query: 208 FEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQA 267
P + + +I K +A + M VK + + TY +ID CK G + A
Sbjct: 278 LSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKI-TYTTLIDGCCKEGDLDSA 336
Query: 268 YTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKG 323
+ + M + I D + +++I GL GR +A K++ E+ KPD Y +I
Sbjct: 337 FEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINE 396
Query: 324 LLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+ + ++ +EM + G P++ TY +L+ G
Sbjct: 397 FCKKGDVWKGXKLLKEMQRDGHVPSVVTYNVLMNG 431
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 93/227 (40%), Gaps = 43/227 (18%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
N +TF ++D K+ +DL E ++M + L D
Sbjct: 246 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPD------------------------ 281
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVG 191
L N ++ LC++ + +A +LI ++S + +KP++I Y LI G C G
Sbjct: 282 ----------LITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEG 331
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLST 250
DL A + M E +I + + +A K+ +M+ V D T
Sbjct: 332 DLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDA--RT 389
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
Y ++I+ CK+G + + +L+EM + D S + Y +L G
Sbjct: 390 YTMIINEFCKKGDVWKGXKLLKEM-----QRDGHVPSVVTYNVLMNG 431
>gi|255580552|ref|XP_002531100.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529296|gb|EEF31265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 483
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 171/366 (46%), Gaps = 23/366 (6%)
Query: 54 RPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKI 113
+ + LF Y Q F H+ +++ +V + +SR + L + + T I
Sbjct: 63 KALSLFHDYLQNG---FRHDYPSYSALVYKLARSRRFEAVETVLGYLQDFNVRCRDTLFI 119
Query: 114 ALMT-LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW 172
AL +V + K + F+ M C +L+ N ++ L + +AK L + SE
Sbjct: 120 ALFEHYGKVGLVAKAIRLFNEMTGFNCIRTLQSFNALLNVLVDNDRLFDAKQLFDRSSEM 179
Query: 173 -IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEA 231
+ N + + LIKG+ G+ +A K+++ M + EPS+ + +I + + +A
Sbjct: 180 GFRLNSVPFNILIKGWLKKGEWYQAGKVFDEMLERKVEPSVVTYNSLIGYLCRNGELGKA 239
Query: 232 MKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
+F+ M +K+ TY ++++ +C G+ +A ML +M RG + NL ++
Sbjct: 240 KGLFKDM-IKKGKRPNAVTYALLMEGLCSMGEYKEAKKMLFDMEYRGCKPKNLNFGVLMN 298
Query: 292 GLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
L +G++ EA ++ E++K PD+ +Y+ LI L + + EA + EM GCE
Sbjct: 299 DLGKKGKIEEAKLLLLEMKKRRFRPDVVIYNILINHLCKEGKVAEAYKTLFEMQIGGCEA 358
Query: 348 TMHTYIMLLQG--HLG--KRGRKGPD--------PLVNFDTIFVGGLVKAGKSLDAAKYV 395
TY ML G +G + G K + P + FV GL+K+G S+D A +V
Sbjct: 359 NAATYRMLADGFCQVGEFEEGLKVLNAMLVSRHAPRIETFNCFVVGLMKSG-SIDGAFFV 417
Query: 396 ERVMNR 401
M +
Sbjct: 418 LEEMEK 423
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 123/276 (44%), Gaps = 11/276 (3%)
Query: 76 TFNRMVDI-IGKSRNIDL--FWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
+FN ++++ + R D ++ EMG R +N F I + + E + F
Sbjct: 152 SFNALLNVLVDNDRLFDAKQLFDRSSEMGFR--LNSVPFNILIKGWLKKGEWYQAGKVFD 209
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVG 191
M + E S+ N ++ LC+ + +AK L + + +PN + Y L++G C +G
Sbjct: 210 EMLERKVEPSVVTYNSLIGYLCRNGELGKAKGLFKDMIKKGKRPNAVTYALLMEGLCSMG 269
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTY 251
+ EA K+ M G +P ++ K K +EA + M+ +R + Y
Sbjct: 270 EYKEAKKMLFDMEYRGCKPKNLNFGVLMNDLGKKGKIEEAKLLLLEMKKRRFRP-DVVIY 328
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI-- 309
I+I+ +CK GK+++AY L EM G EA+ T + G G E KV+ +
Sbjct: 329 NILINHLCKEGKVAEAYKTLFEMQIGGCEANAATYRMLADGFCQVGEFEEGLKVLNAMLV 388
Query: 310 --EKPDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
P I ++ + GL++ A V EM KR
Sbjct: 389 SRHAPRIETFNCFVVGLMKSGSIDGAFFVLEEMEKR 424
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 100/257 (38%), Gaps = 47/257 (18%)
Query: 75 ITFNRMVDII------GKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMV 128
+T+N ++ + GK++ LF + +++ R V L ++ E +E KKM+
Sbjct: 221 VTYNSLIGYLCRNGELGKAKG--LFKDMIKKGKRPNAVTYALLMEGLCSMGEYKEAKKML 278
Query: 129 -------------NFFHIMNDCGCEYSLE-------------------MLNKVVKTLCQR 156
NF +MND G + +E + N ++ LC+
Sbjct: 279 FDMEYRGCKPKNLNFGVLMNDLGKKGKIEEAKLLLLEMKKRRFRPDVVIYNILINHLCKE 338
Query: 157 KLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVV 215
V EA + ++ + N Y L G+C VG+ E K+ N M P I+
Sbjct: 339 GKVAEAYKTLFEMQIGGCEANAATYRMLADGFCQVGEFEEGLKVLNAMLVSRHAPRIETF 398
Query: 216 DKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMF 275
+ + K D A V + M ++M L + ++ C + + + + E +
Sbjct: 399 NCFVVGLMKSGSIDGAFFVLEEMEKRKM-ALDSDGWEALVRCCCSEHRGAGSVLLCESLI 457
Query: 276 KRGIEADNLTLSSIIYG 292
+ NL ++S+ G
Sbjct: 458 RH-----NLVVASLNTG 469
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 165/361 (45%), Gaps = 38/361 (10%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
++IT+N ++D + K ++ + L +M + L N TF I ++ + LK+ N
Sbjct: 231 DNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVI 290
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDV 190
+M+ N ++ C++ + EA L ++ + P+ + Y LI G +
Sbjct: 291 ELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEH 350
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG--- 247
G E K+ M G +P+ + M++ F K K DE K V++M++ G
Sbjct: 351 GSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKT-----VRKMEESGCLP 405
Query: 248 -LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
+ TY +I W CK GK+ +A+ +++EM ++G++ D++TL++++ L +L EA+ ++
Sbjct: 406 DIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLL 465
Query: 307 EEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
+ D Y LI G + +A +A +++ EM ++ P++ TY
Sbjct: 466 CSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITY---------- 515
Query: 363 RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEG 422
+ GL + GK+ A ++ ++ G+ YN +H Y E
Sbjct: 516 -------------NSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQ 562
Query: 423 V 423
V
Sbjct: 563 V 563
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 122/248 (49%), Gaps = 14/248 (5%)
Query: 106 VNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYL 165
+N +F I + + + M D GC N ++ LC++ + EA+ L
Sbjct: 195 INTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDL 254
Query: 166 ILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFK 224
+L + ++ + PN + L+ G C +G L EA+ + LM+ P + MI F K
Sbjct: 255 LLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCK 314
Query: 225 INKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIE 280
+ EAM++ + M++L LS TY +I+ + G + + ++EEM RG++
Sbjct: 315 QGRIAEAMRLRE-----EMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMK 369
Query: 281 ADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQV 336
+++T + ++ + +G++ E K V ++E+ PDI Y+ LI ++ + EA ++
Sbjct: 370 PNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRL 429
Query: 337 FREMIKRG 344
EM ++G
Sbjct: 430 MDEMGRKG 437
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 109/227 (48%), Gaps = 6/227 (2%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEA 196
G + + N ++ C EA ++ K+ ++ P+ I Y ++ G C G L EA
Sbjct: 192 GVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEA 251
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVID 256
+ M ++G P+ + ++ ++ EA V ++M + TY ++I
Sbjct: 252 RDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAW-TYNVMIS 310
Query: 257 WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KP 312
CK+G+I++A + EEM + D +T +++I G G E +K++EE+E KP
Sbjct: 311 GFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKP 370
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
+ Y+ ++K ++ + E + R+M + GC P + TY L+ H
Sbjct: 371 NSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWH 417
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/354 (21%), Positives = 168/354 (47%), Gaps = 23/354 (6%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALMTLAEVRELKKMVNFFHI 133
+T+N +++ + + + ++ ++EM GR N T+ + + + ++ ++
Sbjct: 338 VTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRK 397
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGD 192
M + GC + N ++ C+ + EA L+ ++ + +K +++ +++ C
Sbjct: 398 MEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERK 457
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
L EA + G+ +I +FK K +A++++ M+ K + + TY
Sbjct: 458 LDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIP-SIITYN 516
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY----KVVEE 308
+I +C+ GK +QA L+E+ + G+ D +T ++II+G G++ +A+ K+VE+
Sbjct: 517 SMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEK 576
Query: 309 IEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL-----QGHLG-- 361
KPD+ + L+ GL + +A ++F I +G + +Y ++ + G
Sbjct: 577 NFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEA 636
Query: 362 -------KRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRF 408
+ + GPD ++ I +GGL AG+ DA +++ ++ +G +F
Sbjct: 637 FDLLEEMEEKKLGPD-CYTYNAI-LGGLTDAGRMKDAEEFISKIAEKGKSENQF 688
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 128/283 (45%), Gaps = 28/283 (9%)
Query: 184 IKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDE---AMKVFQMMRV 240
I Y G +A++I+N M G +P++ + ++ + + VF +
Sbjct: 131 IGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDF-I 189
Query: 241 KRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
K + +++ I+I C + +A +L +M G DN+T ++I+ GL +GRL
Sbjct: 190 KIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLN 249
Query: 301 EAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
EA ++ +++ P+ + ++ L+ G RL +EA V M + P TY +++
Sbjct: 250 EARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMI 309
Query: 357 QGHLGKRGRKG---------------PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNR 401
G K+GR PD +V ++T+ + G + G S + K +E + R
Sbjct: 310 SG-FCKQGRIAEAMRLREEMENLKLSPD-VVTYNTL-INGCFEHGSSEEGFKLIEEMEGR 366
Query: 402 GVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLADI 444
G++ YN + ++ + + ++ +K+ E G L DI
Sbjct: 367 GMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGC--LPDI 407
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 159/365 (43%), Gaps = 30/365 (8%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHI 133
+T+ MV ++ + L EM R L +N + + L + ++ V
Sbjct: 286 VTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVED 345
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M G + V+ C++ + A+ ++ + + + + Y LI G C G+
Sbjct: 346 MVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGE 405
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
L EA ++ M D+G + +I+ + K+ K EA V M KR+ + TY
Sbjct: 406 LKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTP-NVVTYT 464
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
+ D +CK+G + A +L EM +G+E + T +S+I GL G L +A + + +++
Sbjct: 465 ALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEA 524
Query: 311 --KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGP 368
KPD+ Y +I L + + A + +EM+ +G +PT+ TY +L+ G
Sbjct: 525 GLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNG---------- 574
Query: 369 DPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEE 428
+ G V+ GK L +E ++ + + YN + Y E+ + E
Sbjct: 575 --------FCMSGRVEGGKRL-----LEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTE 621
Query: 429 VGKKL 433
+ K +
Sbjct: 622 IYKGM 626
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 134/278 (48%), Gaps = 15/278 (5%)
Query: 99 EMGRRRLVNDKTFKIALMT-LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRK 157
EM +R L D AL+ L ELK+ M D G + ++ C+
Sbjct: 380 EMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVG 439
Query: 158 LVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVD 216
+ EA + K+ + + PN + Y L G C GD+ A+++ + M +G E +I +
Sbjct: 440 KMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYN 499
Query: 217 KMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLE 272
+I K ++AM+ + MD+ GL TY +I +C+ ++ +A+++L+
Sbjct: 500 SLINGLCKAGNLEQAMRT-----MIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQ 554
Query: 273 EMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE-EIEK---PDISLYHGLIKGLLRLR 328
EM +GI+ +T + ++ G GR+ +++E +EK P+ + Y+ L+K +
Sbjct: 555 EMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEK 614
Query: 329 RAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK 366
+ T++++ M+ + P +TY +L++GH R K
Sbjct: 615 NMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMK 652
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 128/281 (45%), Gaps = 35/281 (12%)
Query: 139 CEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASK 198
C Y N ++K LC + +A L +++ P+ + YG ++ GYC + +L A K
Sbjct: 254 CSY-----NILLKALCTAGRIKDAHQLFDEMAS--PPDVVTYGIMVHGYCTLSELETAIK 306
Query: 199 IWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWM 258
+ + M G E + +I + +A++V + M V L + + V+
Sbjct: 307 LLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDM-VMHGVVLDAAVFTTVMSGF 365
Query: 259 CKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP----DI 314
C++G ++ A +EM KRG+ AD +T +++I GL G L+EA +V++E+E D
Sbjct: 366 CRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDA 425
Query: 315 SLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNF 374
Y LI G ++ + EA V +M+++ P + TY
Sbjct: 426 VTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTY---------------------- 463
Query: 375 DTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
T GL K G A + + + ++G+E+ F YN ++
Sbjct: 464 -TALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLIN 503
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 84/208 (40%), Gaps = 37/208 (17%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFF 131
N T+N +++ + K+ N++ T+ +M L D T+ + L + +EL + +
Sbjct: 494 NIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLL 553
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAK------------------------YLIL 167
M D G + ++ N ++ C V K Y I
Sbjct: 554 QEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIE 613
Query: 168 K------------LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVV 215
K LS+ + PNE Y LIKG+C ++ EA + M ++GF +
Sbjct: 614 KNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSY 673
Query: 216 DKMIETFFKINKDDEAMKVFQMMRVKRM 243
+ +I K K EA ++F+ MR R+
Sbjct: 674 NALIRLLNKKKKFTEARRLFEKMRKDRL 701
>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
gi|194700420|gb|ACF84294.1| unknown [Zea mays]
gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
Length = 598
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 153/340 (45%), Gaps = 40/340 (11%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T+ I L + R ++ + M GCE + N ++ +C+ V +A+ L+ L
Sbjct: 200 TYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSL 259
Query: 170 -SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
S KPN + Y ++KG+C + ++A +I + M E P+ ++ +I T +
Sbjct: 260 PSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLL 319
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
+ + M K + TY VI MC++G + A +L M G + D +T ++
Sbjct: 320 QKVTLYLEKMS-KHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNT 378
Query: 289 IIYGLLARGRLREAYKVVEEIEK----PDISLYHGLI-----KGLLRLRRAREATQVFRE 339
++ GL + R +A +++ ++ + PD S ++ +I KGL+ +A +VF++
Sbjct: 379 VLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLI-----LQAFEVFKQ 433
Query: 340 MIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVM 399
M ++GC P TY + +GGL KAGK A + + +
Sbjct: 434 MPEKGCNPNSTTY-----------------------STIIGGLTKAGKMEQALELLNEMA 470
Query: 400 NRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLA 439
N+G + Y + E+ + +V KL++ G++
Sbjct: 471 NKGFNTDKM-YRVLTESLNKEDKIEEVVQVVHKLQDSGIS 509
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 149/340 (43%), Gaps = 47/340 (13%)
Query: 60 FQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTL 118
F + +P N++T+N ++D + + ++D E L + R N + L
Sbjct: 223 FMRAEGCEP----NNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGF 278
Query: 119 AEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNE 177
+ M C + LN ++ TLC++ L+ + + K+S+ N
Sbjct: 279 CSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANV 338
Query: 178 IAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV-FQ 236
+ Y +I G C+ G++ A ++ + M G +P I + +++ ++ ++A ++ +
Sbjct: 339 VTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIK 398
Query: 237 MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR 296
M + R+ D ST+ +I + C++G I QA+ + ++M ++G ++ T S+II GL
Sbjct: 399 MSQNDRLPDN--STFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKA 456
Query: 297 GRLREAYKVVEEIE--------------------------------------KPDISLYH 318
G++ +A +++ E+ P LY+
Sbjct: 457 GKMEQALELLNEMANKGFNTDKMYRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYN 516
Query: 319 GLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
++ GL R + A V +M+ GC P TYI+L++G
Sbjct: 517 TVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILIEG 556
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 117/258 (45%), Gaps = 18/258 (6%)
Query: 143 LEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIA--YGWLIKGYCDVGDLIEASKIW 200
+ + N++V+ LC+R +A ++ E P A YG L+ GYC G L +A ++
Sbjct: 96 VPLANRLVRDLCRRGRPADAARVV----EACGPEATAATYGALVDGYCRAGLLEDARRVV 151
Query: 201 NLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCK 260
M S + +I + + +A+ V M + R + TY I++ CK
Sbjct: 152 GGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGM-LCRGCAPDVVTYNILLQAACK 210
Query: 261 RGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISL 316
QA +++ M G E +N+T + II + G + +A +++ + KP+
Sbjct: 211 GRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVN 270
Query: 317 YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDT 376
Y+ ++KG + R +A ++ EM++ C P T +++ RKG L+ T
Sbjct: 271 YNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLC----RKG---LLQKVT 323
Query: 377 IFVGGLVKAGKSLDAAKY 394
+++ + K G + + Y
Sbjct: 324 LYLEKMSKHGCTANVVTY 341
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 90/204 (44%), Gaps = 21/204 (10%)
Query: 242 RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
R D+ L+ R+V D +C+RG+ + A ++E G EA T +++ G G L +
Sbjct: 92 RPPDVPLAN-RLVRD-LCRRGRPADAARVVEAC---GPEATAATYGALVDGYCRAGLLED 146
Query: 302 AYKVV----EEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
A +VV ++ ++ LI L R +A V M+ RGC P + TY +LLQ
Sbjct: 147 ARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQ 206
Query: 358 GHLGKRGRKGPDPLVNFD------------TIFVGGLVKAGKSLDAAKYVERVMNRGVEV 405
RG + L++F + + + + G A + + + +RG +
Sbjct: 207 AACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKP 266
Query: 406 PRFDYNKFLHYYSNEEGVVMFEEV 429
+YN L + + E V +E+
Sbjct: 267 NTVNYNTVLKGFCSIERWVDADEI 290
>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
Length = 1013
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 162/360 (45%), Gaps = 25/360 (6%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKT-FKIALMTLAEVRELKKMVNFF 131
+ + + ++D + K+ ++ ++ QE+ R ++ D + + + L + + K+ +F
Sbjct: 518 DHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFL 577
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI--LKLSEWIKPNEIAYGWLIKGYCD 189
M + G + N ++ + C++ +A L+ +K+S IKPN I Y L+ G
Sbjct: 578 TEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSS-IKPNLITYNTLVAGLFG 636
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ-MMRVKRMDDLGL 248
G + +A + N M GF PS ++++ + + D + + + MM D+
Sbjct: 637 TGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADI-- 694
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY----K 304
+ Y ++ +C G +A +LEEM GI D +T +++I G L A+ +
Sbjct: 695 TVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQ 754
Query: 305 VVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
++ + P+I+ ++ L+ GL + R EA V EM K G EP TY +L GH GK+
Sbjct: 755 MLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGH-GKQS 813
Query: 365 R-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
KG P V+ + KAG A + + + RGV Y+
Sbjct: 814 NKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYD 873
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 111/232 (47%), Gaps = 6/232 (2%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEAS 197
G + +N ++ LC+ V A L + + I + LI GYC VGD A
Sbjct: 130 GVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHALDVIGWNTLIAGYCRVGDTPAAL 189
Query: 198 KIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDW 257
+ + MT +G + + ++ F + + D A V MM+ +D ++TY I +
Sbjct: 190 SVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDP-NVATYTPFIVY 248
Query: 258 MCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PD 313
C+ + +A+ + E M + G+ D +TLS+++ GL GR EAY + E++K P+
Sbjct: 249 YCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPN 308
Query: 314 ISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
Y LI L + R +E + EM+ RG + TY L+ LGK+G+
Sbjct: 309 HVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMD-WLGKQGK 359
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 161/357 (45%), Gaps = 48/357 (13%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALM----TLAEVRELKK 126
A N +T+ ++D + K+ L EM R +V D ALM + E+K
Sbjct: 306 APNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKD 365
Query: 127 MVNFF--HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWL 183
+ F ++ G Y++ ++ LC+ V EA+ ++L++ E I PN + + +
Sbjct: 366 TLRFALSDNLSPNGVTYTV-----LIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSV 420
Query: 184 IKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM 243
I G+ G L +A++ +M + G P++ +I+ FFK D A++V+ M +
Sbjct: 421 INGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCE-- 478
Query: 244 DDLGLSTYRIVIDWMC----KRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
G+ + ++D + + GKI +A + ++ G+ D++ +++I GL G +
Sbjct: 479 ---GVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDM 535
Query: 300 REAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
A+K +E+ PD +Y+ I L L + +EA EM G +P TY +
Sbjct: 536 PTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTM 595
Query: 356 LQGHLGKRGRKGPDP-----------------LVNFDTIFVGGLVKAGKSLDAAKYV 395
+ H RKG L+ ++T+ V GL G +++ AKY+
Sbjct: 596 IVSHC----RKGETAKALKLLHEMKMSSIKPNLITYNTL-VAGLFGTG-AVEKAKYL 646
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 130/310 (41%), Gaps = 48/310 (15%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
N +T+ ++D + K+ N+D + L EM +K+ ++T + V
Sbjct: 378 NGVTYTVLIDALCKAHNVDEAEQVLLEM------EEKSISPNVVTFSSV----------- 420
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDVG 191
+N VK R L+ +A +Y + I PN + YG LI G+
Sbjct: 421 -------------INGFVK----RGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQ 463
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS-- 249
A ++++ M EG + + +VD ++ + K +EAM +F K GLS
Sbjct: 464 GQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALF-----KDASGSGLSLD 518
Query: 250 --TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
Y +ID + K G + A+ +E+ R + D + + I L G+ +EA +
Sbjct: 519 HVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLT 578
Query: 308 EIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
E+ KPD S Y+ +I R +A ++ EM +P + TY L+ G G
Sbjct: 579 EMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTG 638
Query: 364 GRKGPDPLVN 373
+ L+N
Sbjct: 639 AVEKAKYLLN 648
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 122/288 (42%), Gaps = 20/288 (6%)
Query: 146 LNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
L+ +V LC+ EA L ++ + PN + Y LI G E + M
Sbjct: 277 LSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMV 336
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
G + +++ K K DE + + G+ TY ++ID +CK +
Sbjct: 337 SRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGV-TYTVLIDALCKAHNV 395
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA--YK--VVEEIEKPDISLYHGL 320
+A +L EM ++ I + +T SS+I G + RG L +A YK + E P++ Y L
Sbjct: 396 DEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTL 455
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG---------RKGPDPL 371
I G + + A +V+ +M+ G + L+ G L + G +
Sbjct: 456 IDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNG-LRQNGKIEEAMALFKDASGSG 514
Query: 372 VNFD----TIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
++ D T + GL KAG A K+ + +M+R + YN F++
Sbjct: 515 LSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFIN 562
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 128/313 (40%), Gaps = 29/313 (9%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAK-YL 165
N T+ + +LA+ K++++ M G L ++ L ++ E K L
Sbjct: 308 NHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTL 367
Query: 166 ILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI 225
LS+ + PN + Y LI C ++ EA ++ M ++ P++ +I F K
Sbjct: 368 RFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKR 427
Query: 226 NKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
D+A + +MM+ +R + + TY +ID K A + +M G++ +
Sbjct: 428 GLLDKATEYKRMMK-ERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFI 486
Query: 286 LSSIIYGLLARGRLREAYKVVEEIEKPDISL----YHGLIKGLLRLRRAREATQVFREMI 341
+ S++ GL G++ EA + ++ +SL Y LI GL + A + +E++
Sbjct: 487 VDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELM 546
Query: 342 KRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNR 401
R P Y +F+ L GK +A ++ + N
Sbjct: 547 DRNMLPDAVVY-----------------------NVFINCLCMLGKFKEAKSFLTEMRNM 583
Query: 402 GVEVPRFDYNKFL 414
G++ + YN +
Sbjct: 584 GLKPDQSTYNTMI 596
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 141/334 (42%), Gaps = 39/334 (11%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N +V C+ V A+ ++ + E + PN Y I YC + EA ++ M
Sbjct: 208 NTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVR 267
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKR 261
G + + ++ + + EA +F + MD +G + TY +ID + K
Sbjct: 268 NGVLLDVVTLSALVAGLCRDGRFSEAYALF-----REMDKVGAAPNHVTYCTLIDSLAKA 322
Query: 262 GKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK----VVEEIEKPDISLY 317
G+ + ++L EM RG+ D +T ++++ L +G+ E + + P+ Y
Sbjct: 323 GRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTY 382
Query: 318 HGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG------------- 364
LI L + EA QV EM ++ P + T+ ++ G + KRG
Sbjct: 383 TVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFV-KRGLLDKATEYKRMMK 441
Query: 365 RKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYV-ERVMNRGVEVPRFDYNKFLHYYSN--- 419
+G +P +V + T+ G G+ DAA V ++ GV+V +F + ++
Sbjct: 442 ERGINPNVVTYGTLIDGFFKFQGQ--DAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGK 499
Query: 420 -EEGVVMFEEV---GKKLREVGLADLADIFQRYG 449
EE + +F++ G L V L D + G
Sbjct: 500 IEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAG 533
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 28/163 (17%)
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE---IEKPDISLYHGLI 321
+ A +L EM KRG+ D +T+++++ GL G++ A + + I D+ ++ LI
Sbjct: 117 AHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHALDVIGWNTLI 176
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGG 381
G R+ A V M +G P +V ++T+ V G
Sbjct: 177 AGYCRVGDTPAALSVADRMTAQGL----------------------PMDVVGYNTL-VAG 213
Query: 382 LVKAGKSLDAAKYVERVMNR-GVEVPRFDYNKFLHYYSNEEGV 423
+AG+ +DAA+ V +M GV+ Y F+ YY +GV
Sbjct: 214 FCRAGQ-VDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGV 255
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 174/397 (43%), Gaps = 52/397 (13%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIM 134
T++ +++ K R D + L EM R +N T+ + + L +++ F M
Sbjct: 119 TYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDM 178
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDL 193
D G ++ LC+ + EAK L+ ++S +KPN + Y LI G+ G+
Sbjct: 179 EDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNA 238
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMR------------- 239
EA K+ M G +P+ D ++ K+ + D A + QM+R
Sbjct: 239 DEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLI 298
Query: 240 ----------------VKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGI 279
+ M++ G+S TY I+I +C+ G+ +A +LEEM +G+
Sbjct: 299 IEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGL 358
Query: 280 EADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQ 335
+ + + +I G G + A ++ +++ K PD+ Y+ LI GL ++ R E+T+
Sbjct: 359 KPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTK 418
Query: 336 VFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVN---------FDTIFVGGLVKAG 386
F +M +RG P TY L+ G+L + + LV D I++ L
Sbjct: 419 YFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYF 478
Query: 387 KSLDAAKY---VERVMNRGVEVPRFDYNKFLHYYSNE 420
KS D K + ++++GV + Y +H S+
Sbjct: 479 KSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSS 515
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 127/299 (42%), Gaps = 54/299 (18%)
Query: 198 KIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDW 257
K+ M G P + +IE + K+ + D A KV MR +R L TY ++I
Sbjct: 103 KVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMR-ERGCGLNTVTYNVLIAG 161
Query: 258 MCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPD 313
+C+ G + +A+ ++M G+ D T ++I GL R EA +++E+ KP+
Sbjct: 162 LCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPN 221
Query: 314 ISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT------------------------- 348
+ +Y LI G +R A EA ++ +EM+ G +P
Sbjct: 222 VVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLK 281
Query: 349 ----------MHTYIMLLQGHLGKRGRK------------GPDPLVNFDTIFVGGLVKAG 386
TY ++++GH +K G P V +I + GL ++G
Sbjct: 282 QMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSG 341
Query: 387 KSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLADIF 445
+ A+ +E + +G++ F Y + Y E V + E+ K+ +V + L D++
Sbjct: 342 EPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNV--LPDLY 398
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 128/297 (43%), Gaps = 17/297 (5%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRE--LKKMVNF 130
N T++ M+ + +S + + L+EM + L F A + RE +
Sbjct: 326 NVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGL-KPNAFVYAPLISGYCREGNVSLACEI 384
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCD 189
F M L N ++ L + V E+ KY + PNE Y LI GY
Sbjct: 385 FDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLK 444
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL- 248
GDL A ++ M D G +P+ + ++E++FK + ++ F K M D G+
Sbjct: 445 NGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTF-----KSMLDQGVM 499
Query: 249 ---STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
Y I+I + G + A+ +L E+ K G D SS+I GL +A+ +
Sbjct: 500 LDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGI 559
Query: 306 VEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
++E+ K P+I Y+ LI GL + A VF ++ +G P TY L+ G
Sbjct: 560 LDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDG 616
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 124/273 (45%), Gaps = 16/273 (5%)
Query: 77 FNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVNFFHIMN 135
+ ++ + S N++ + L E+ + V D +L++ L + + +K M+
Sbjct: 505 YGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMS 564
Query: 136 DCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGDLI 194
G + ++ N ++ LC+ + A+ + L++ + PN + Y LI G C VGD+
Sbjct: 565 KKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDIS 624
Query: 195 EASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIV 254
A ++N M G P V + ++AM + + M ++ +S++ +
Sbjct: 625 NAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLR--GHASISSFNNL 682
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDI 314
+D CKRGK+ + +L + RG+ + LT+ +II GL G+L E + + E+++
Sbjct: 683 VDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTS 742
Query: 315 SLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
AR + +F +MI +G P
Sbjct: 743 E------------SAARHFSSLFMDMINQGKIP 763
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 151/375 (40%), Gaps = 66/375 (17%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNF-- 130
N IT++ +V + K +D L++M R D T L+ R K F
Sbjct: 256 NKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPD-TITYNLIIEGHFRHHNKKDAFRL 314
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCD 189
M + G ++ + ++ LCQ +A L+ +++ + +KPN Y LI GYC
Sbjct: 315 LSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCR 374
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR---------- 239
G++ A +I++ MT P + + +I K+ + +E+ K F M+
Sbjct: 375 EGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFT 434
Query: 240 --------------------VKRMDDLGLSTYRIV-IDWM---CKRGKISQAYTMLEEMF 275
V+RM D GL ++ ID + K I + + + M
Sbjct: 435 YSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSML 494
Query: 276 KRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAR 331
+G+ DN +I+ L + G + A++V+ EIEK PD+ +Y LI GL +
Sbjct: 495 DQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADRE 554
Query: 332 EATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDA 391
+A + EM K KG DP + + GL K+G A
Sbjct: 555 KAFGILDEMSK-----------------------KGVDPNIVCYNALIDGLCKSGDISYA 591
Query: 392 AKYVERVMNRGVEVP 406
++ +G+ VP
Sbjct: 592 RNVFNSILAKGL-VP 605
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/413 (22%), Positives = 176/413 (42%), Gaps = 26/413 (6%)
Query: 43 LQICN--NFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEM 100
Q+C PL F++ AQ + H+ + ++D +G + + L +M
Sbjct: 72 FQLCKLLELPLDVETSMEIFKWA-GAQKGYCHSFSVYYLLIDKLGAAAGFKVIDRLLLQM 130
Query: 101 GRRRLVNDKTFKIALMTLAEVRELKKMVN--FFHIMNDCGCEYSLEMLNKVVKTLCQRKL 158
+V ++ I +M L + CE S N V+ L
Sbjct: 131 KEEGIVFRESLFILIMKYYGRAGLPGQATRLLLDMKGVYCCEPSFRSYNVVLDVLVVGNC 190
Query: 159 -VVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDK 217
V + LS+ + PN+ +G ++K C V ++ A + MT G P+ +
Sbjct: 191 PSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQT 250
Query: 218 MIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKR 277
+I+ K ++ DEA+K+ + M + ++T+ VI C+ ++ + +++ M +
Sbjct: 251 LIDALSKRDRVDEALKLLEEMFLMGCPP-DVNTFNTVIYGFCRLNRVLEGAKLVDRMILK 309
Query: 278 GIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQ-V 336
G +++T +++GL R+ EA ++ ++ P++ ++ L+ G +R R EAT V
Sbjct: 310 GFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFV 369
Query: 337 FREMIKRGCEPTMHTYIMLLQGHLGKRG-------------RKGPDPLVNFDTIFVGGLV 383
+ +MI G P + T+ L+ G L K+G KG P +N TI + G
Sbjct: 370 YDKMINNGYVPDVFTFSTLVNG-LCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFC 428
Query: 384 KAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN----EEGVVMFEEVGKK 432
K G+ +A + ++ +G + YN + E + MF E+ K
Sbjct: 429 KKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSK 481
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 168/371 (45%), Gaps = 26/371 (7%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
F N +T+ ++ + K+ ID L ++ +V+ T + + E V
Sbjct: 311 FTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFV- 369
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYC 188
+ M + G + + +V LC++ L A L+ + ++ KPN Y LI G+C
Sbjct: 370 -YDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFC 428
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
G L EA I M +GF + + +I K K EA+ +F M K +
Sbjct: 429 KKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKP-DI 487
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
T+ +I +C+ ++ A + +M G+ A+++T +++I+ L RG ++EA K+V +
Sbjct: 488 FTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVND 547
Query: 309 IEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL--GK 362
+ L Y+GLIK L + + +F EMI++G P++ T +L+ G GK
Sbjct: 548 MLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGK 607
Query: 363 -------------RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFD 409
RG PD +V ++++ + GL K G+ +A E++ G++
Sbjct: 608 VHNALEFMRDMIHRGFS-PD-IVTYNSL-INGLCKRGRIQEALNLFEKLQAEGIQPDSIT 664
Query: 410 YNKFLHYYSNE 420
YN + + E
Sbjct: 665 YNTLICWLCRE 675
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 133/290 (45%), Gaps = 7/290 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
N T+ ++D K ++ L+EM + +N + + L + ++ + ++ F
Sbjct: 416 NLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMF 475
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDV 190
M+ GC+ + N ++ LC+ + +A L + E + N + + LI +
Sbjct: 476 GEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRR 535
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G++ EA K+ N M G + +I+ K ++ + +F+ M K + + T
Sbjct: 536 GEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTP-SIIT 594
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
I+I+ C GK+ A + +M RG D +T +S+I GL RGR++EA + E+++
Sbjct: 595 CNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQ 654
Query: 311 ----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
+PD Y+ LI L R +A + ++ G P T+ +L+
Sbjct: 655 AEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILV 704
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 86/193 (44%), Gaps = 12/193 (6%)
Query: 105 LVNDKTFKI---ALMTLAEVRELKKMVN--FFHIMNDCGCEYSLEMLNKVVKTLCQRKLV 159
+ N TF A + E++E K+VN F GC N ++K LC+ V
Sbjct: 519 IANSVTFNTLIHAFLRRGEIQEALKLVNDMLFR-----GCPLDEITYNGLIKALCKTGAV 573
Query: 160 VEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKM 218
+ L ++ + + P+ I LI G+C G + A + M GF P I + +
Sbjct: 574 EKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSL 633
Query: 219 IETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRG 278
I K + EA+ +F+ ++ + + + TY +I W+C+ G A +L + G
Sbjct: 634 INGLCKRGRIQEALNLFEKLQAEGIQPDSI-TYNTLICWLCREGAFDDACFLLYRGVENG 692
Query: 279 IEADNLTLSSIIY 291
+++T + ++Y
Sbjct: 693 FVPNDVTWNILVY 705
>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
Length = 703
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 146/308 (47%), Gaps = 16/308 (5%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEV 121
Y++ + ++ +N +V ++ + W+ G L N +T+ I + L +
Sbjct: 322 YSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDS 381
Query: 122 RELKKMVNFFHIM-NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEI-A 179
+ + + + ++ D C ++ LCQ +A + + K ++ +
Sbjct: 382 GMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFS 441
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
Y +I G C+VG L++A K++ M +G +P+ + + +I F ++ + +A++++
Sbjct: 442 YSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYS--- 498
Query: 240 VKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
+M D G S TY +ID +CK K +A ++ EM + G D T S+I GL +
Sbjct: 499 --KMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFS 556
Query: 296 RGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMI-KRGCEPTMH 350
++ +A + ++I K D+ +++ LI GL + EA VF +M K+ C P +
Sbjct: 557 DKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLV 616
Query: 351 TYIMLLQG 358
TY L+ G
Sbjct: 617 TYNTLMDG 624
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 97/420 (23%), Positives = 189/420 (45%), Gaps = 59/420 (14%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLA-EVRELKKMVN 129
A + IT++ ++ + K +D + L EM R + D AL+ + E +K++
Sbjct: 190 APDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMR 249
Query: 130 FFH-IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGY 187
+ ++ D G +L N ++ LC+ E + ++ + ++P+ I YG LI G
Sbjct: 250 VWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGL 309
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV-----FQMMR--- 239
C GD+ A+++++ + G + + +++ F + + EA K F +R
Sbjct: 310 CRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLR 369
Query: 240 -----VKRMDDLGLS---------------------TYRIVIDWMCKRGKISQAYTMLEE 273
+K + D G+ T+ +I +C+ G ++A+T+ EE
Sbjct: 370 TYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEE 429
Query: 274 MFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRR 329
G + D + SS+I GL GRL +A KV E+++ KP+ +Y+ LI G ++ R
Sbjct: 430 ARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYR 489
Query: 330 AREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDT 376
+A +++ +M GC PT+ TY L+ G L K + G P +
Sbjct: 490 TSDAVRIYSKMADNGCSPTVITYNTLIDG-LCKAEKYQEASSVAREMVENGFTPDITTYG 548
Query: 377 IFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN----EEGVVMFEEVGKK 432
+ GL K DA ++++ +G++V +N +H + +E + +F ++ +K
Sbjct: 549 SLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEK 608
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 117/247 (47%), Gaps = 7/247 (2%)
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPN 176
L V L V + M+ GC+ + + N ++ CQ +A + K+++ P
Sbjct: 449 LCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPT 508
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
I Y LI G C EAS + M + GF P I +I F K D+A+ +++
Sbjct: 509 VITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWK 568
Query: 237 MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMF-KRGIEADNLTLSSIIYGLLA 295
+ K + + + + I+I +C GK+ +A + +M K+ + +T ++++ GL
Sbjct: 569 QILYKGLK-VDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYE 627
Query: 296 RGRLREAY----KVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
G + +A + E+ +PDI Y+ IKGL R E Q+ E++ RG PT+ T
Sbjct: 628 TGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVIT 687
Query: 352 YIMLLQG 358
+ +L++
Sbjct: 688 WNILVRA 694
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 106/225 (47%), Gaps = 5/225 (2%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
N + + +V V + M D GC ++ N ++ LC+ + EA +
Sbjct: 473 NSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVA 532
Query: 167 LKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI 225
++ E P+ YG LI+G + +A IW + +G + + + + +I
Sbjct: 533 REMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSA 592
Query: 226 NKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
K DEA+ VF M+ K+ L TY ++D + + G I +A T+ + + G+E D ++
Sbjct: 593 GKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIIS 652
Query: 286 LSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLR 326
++ I GL + R+ E ++++E+ P + ++ L++ +++
Sbjct: 653 YNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIK 697
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 114/259 (44%), Gaps = 25/259 (9%)
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR---VKRMDDLGLSTYRIVIDWMCKRGK 263
G P I + +++ F + + +A F + R L TY IV+ +C RG
Sbjct: 114 GCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGD 173
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHG 319
+ +A T+ + + +R + D +T S+++ GL + RL A +++E+ + PD+ Y+
Sbjct: 174 LDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNA 233
Query: 320 LIKGLLRLRRAREATQVFREMIKR-GCEPTMHTYIMLLQGHLGKRGR------------- 365
L+ G + + +V+ +++K G P + TY ++L G L K GR
Sbjct: 234 LLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDG-LCKFGRFKEVGEVWERMVA 292
Query: 366 KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVM 425
P V I + GL ++G AA+ ++ G+ + YN + + V
Sbjct: 293 NNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRV-- 350
Query: 426 FEEVGKKLREVGLADLADI 444
+E K G A L ++
Sbjct: 351 -QEAWKFWDSAGFAGLRNL 368
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 81/401 (20%), Positives = 153/401 (38%), Gaps = 68/401 (16%)
Query: 105 LVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKY 164
LV F A+M A + + + + GC + N ++ + + +A
Sbjct: 87 LVVLSAFSRAIMPDAALDAFRALPSIL------GCNPGIRSHNALLDAFVRARRFSDADA 140
Query: 165 LILKLSEW-----IKPNEIAYGWLIKGYCDVGDLIEASKIWNL----------------- 202
LS I PN Y +++ C GDL A +++
Sbjct: 141 FFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLM 200
Query: 203 ------------------MTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD 244
M G +P + + ++ FK + ++ M+V+ +
Sbjct: 201 CGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGA 260
Query: 245 DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK 304
L+TY +++D +CK G+ + + E M ++ D +T +I+GL G + A +
Sbjct: 261 RPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAAR 320
Query: 305 VVEEIEKP----DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG-- 358
V EI K D ++Y+ L+KG + R +EA + + G + TY ++++G
Sbjct: 321 VYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLF 379
Query: 359 -------------HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEV 405
L K PD V F T+ + GL + G + A E G ++
Sbjct: 380 DSGMVDEAIELWDLLEKDVACIPD-TVTFGTL-IHGLCQNGFANKAFTIFEEARVSGKQL 437
Query: 406 PRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLADIFQ 446
F Y+ ++ N +V +V +K+ + G + I+
Sbjct: 438 DVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYN 478
>gi|410109901|gb|AFV61030.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
microcephala]
Length = 431
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 139/288 (48%), Gaps = 41/288 (14%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T + L L +++ K + F+ + +CG SL N ++ C+ + A+ + +
Sbjct: 109 TCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAI 168
Query: 170 SEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++W ++P+ ++Y L+ GY +GDL E ++ + M G +P + +I K +K
Sbjct: 169 TKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKM 228
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
D+A ++F M VK + G+ T+ +ID CK G++ A + ++M + + D +T ++
Sbjct: 229 DDANELFDEMLVKGLVPNGV-TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 287
Query: 289 IIYGLLARGRLREAYKVVEEIE----KPD------------------------------- 313
+IYGL +G L++A+ +++E+ KPD
Sbjct: 288 LIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQEN 347
Query: 314 ISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
I L Y LI GL + R+ +A ++ REM+ G +P TY M++
Sbjct: 348 IRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIIN 395
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 101/215 (46%), Gaps = 6/215 (2%)
Query: 149 VVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEG 207
++ LC+ + +A L + L + + PN + + LI G+C G + A +I+ M +
Sbjct: 218 LINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 277
Query: 208 FEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQA 267
P + + +I K +A + M VK + + TY +ID CK G + A
Sbjct: 278 LSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKI-TYTTLIDGCCKEGDLDSA 336
Query: 268 YTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKG 323
+ + M + I D + +++I GL GR +A K++ E+ KPD Y +I
Sbjct: 337 FEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINE 396
Query: 324 LLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+ + +++ +EM + G P++ TY +L+ G
Sbjct: 397 FCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 93/227 (40%), Gaps = 43/227 (18%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
N +TF ++D K+ +DL E ++M + L D
Sbjct: 246 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPD------------------------ 281
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVG 191
L N ++ LC++ + +A +LI ++S + +KP++I Y LI G C G
Sbjct: 282 ----------LITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEG 331
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLST 250
DL A + M E +I + + +A K+ +M+ V D T
Sbjct: 332 DLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDA--RT 389
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
Y ++I+ CK+G + + +L+EM + D S + Y +L G
Sbjct: 390 YTMIINEFCKKGDVWKGSKLLKEM-----QRDGHVPSVVTYNVLMNG 431
>gi|41152692|dbj|BAD08216.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 401
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 140/288 (48%), Gaps = 7/288 (2%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMV 128
+ N +T+N ++ + K++ +D E L M + ++ D T+ + + K+ +
Sbjct: 112 ISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAI 171
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGY 187
F M G E + N ++ LC+ EA+ + +++ +KP+ YG L++GY
Sbjct: 172 VFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGY 231
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
G L+E + +LM G P+ V ++ + K K +EAM VF MR + ++
Sbjct: 232 ATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNA 291
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
+ TY VID +CK G++ A E+M G+ D++ +S+I+ L + +A ++
Sbjct: 292 V-TYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFL 350
Query: 308 EIEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
E+ I L ++ +I + R E+ ++F M++ G +P + T
Sbjct: 351 EMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIIT 398
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 133/284 (46%), Gaps = 37/284 (13%)
Query: 161 EAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVD--KM 218
+A+++ +L P+ +Y L+ G CD EA ++ ++M D+G + DVV +
Sbjct: 35 DARHVFDELLRRGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTV 94
Query: 219 IETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRG 278
I FFK D+ + R+ + TY +I +CK + +A +L M K G
Sbjct: 95 INGFFKEGDLDKMLD----QRISP----NVVTYNSIIAALCKAQTVDKAMEVLTTMVKSG 146
Query: 279 IEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREAT 334
+ D +T +SI++G + G+ +EA ++++ +PD+ Y+ L+ L + R EA
Sbjct: 147 VMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEAR 206
Query: 335 QVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKY 394
++F M KRG +P + TY LLQG+ K G LV+ LD
Sbjct: 207 KIFDSMTKRGLKPDITTYGTLLQGYATK-----------------GALVEMHGLLDL--- 246
Query: 395 VERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
++ G+ + ++ + Y+ +E V V K+R+ GL
Sbjct: 247 ---MVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGL 287
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 112/250 (44%), Gaps = 11/250 (4%)
Query: 44 QICNNFPLSWRP----VYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQE 99
I + F S +P V+L + +P + +T+N ++D + K+ +
Sbjct: 156 SIVHGFCSSGQPKEAIVFLKKMRSDGVEP----DVVTYNSLMDYLCKNGRCTEARKIFDS 211
Query: 100 MGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKL 158
M +R L D T+ L A L +M +M G + + + +V +++
Sbjct: 212 MTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEK 271
Query: 159 VVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDK 217
V EA + K+ + + PN + YG +I C G + +A + M DEG P V +
Sbjct: 272 VEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNS 331
Query: 218 MIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKR 277
+I + +K ++A ++F M + R L + +ID CK G++ ++ + + M +
Sbjct: 332 LIHSLCIFDKWEKAEELFLEM-LDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRI 390
Query: 278 GIEADNLTLS 287
G++ D +TL
Sbjct: 391 GVKPDIITLG 400
>gi|125575277|gb|EAZ16561.1| hypothetical protein OsJ_32034 [Oryza sativa Japonica Group]
Length = 526
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 139/285 (48%), Gaps = 7/285 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFF 131
N +T+N ++ + K++ +D E L M + ++ D T+ + + K+ + F
Sbjct: 115 NVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFL 174
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
M G E + N ++ LC+ EA+ + +++ +KP+ YG L++GY
Sbjct: 175 KKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATK 234
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G L+E + +LM G P+ V ++ + K K +EAM VF MR + ++ + T
Sbjct: 235 GALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAV-T 293
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y VID +CK G++ A E+M G+ D++ +S+I+ L + +A ++ E+
Sbjct: 294 YGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEML 353
Query: 311 KPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
I L ++ +I + R E+ ++F M++ G +P + T
Sbjct: 354 DRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIIT 398
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 127/295 (43%), Gaps = 63/295 (21%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVD--KMIETFFKINKDDEAM 232
P+ +Y L+ G CD EA ++ ++M D+G + DVV +I FFK D+ +
Sbjct: 49 PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKML 108
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
R+ + TY +I +CK + +A +L M K G+ D +T +SI++G
Sbjct: 109 D----QRISP----NVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHG 160
Query: 293 LLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
+ G+ +EA ++++ +PD+ Y+ L+ L + R EA ++F M KRG +P
Sbjct: 161 FCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPD 220
Query: 349 MHTYIMLLQGHLGKRG------------RKGPDP-------------------------- 370
+ TY LLQG+ K R G P
Sbjct: 221 ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFS 280
Query: 371 ----------LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
V + T+ + L K+G+ DA Y E++++ G+ YN +H
Sbjct: 281 KMRQQGLNPNAVTYGTV-IDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIH 334
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 142/336 (42%), Gaps = 30/336 (8%)
Query: 44 QICNNFPLSWRP----VYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQE 99
I + F S +P V+L + +P + +T+N ++D + K+ +
Sbjct: 156 SIVHGFCSSGQPKEAIVFLKKMRSDGVEP----DVVTYNSLMDYLCKNGRCTEARKIFDS 211
Query: 100 MGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKL 158
M +R L D T+ L A L +M +M G + + + +V +++
Sbjct: 212 MTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEK 271
Query: 159 VVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDK 217
V EA + K+ + + PN + YG +I C G + +A + M DEG P V +
Sbjct: 272 VEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNS 331
Query: 218 MIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKR 277
+I + +K ++A ++F M + R L + +ID CK G++ ++ + + M +
Sbjct: 332 LIHSLCIFDKWEKAEELFLEM-LDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRI 390
Query: 278 GIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREA 333
G++ D +TL GR EA + P+ Y + + ++ E
Sbjct: 391 GVKPDIITL----------GRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEEL 440
Query: 334 TQVFREMIKRGC--EPTMHTYI---MLLQGHLGKRG 364
Q+F M GC + M +I +L +G + + G
Sbjct: 441 DQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAG 476
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 159/365 (43%), Gaps = 30/365 (8%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHI 133
+T+ MV ++ + L EM R L +N + + L + ++ V
Sbjct: 286 VTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVED 345
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M G + V+ C++ + A+ ++ + + + + Y LI G C G+
Sbjct: 346 MVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGE 405
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
L EA ++ M D+G + +I+ + K+ K EA V M KR+ + TY
Sbjct: 406 LKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTP-NVVTYT 464
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
+ D +CK+G + A +L EM +G+E + T +S+I GL G L +A + + +++
Sbjct: 465 ALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEA 524
Query: 311 --KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGP 368
KPD+ Y +I L + + A + +EM+ +G +PT+ TY +L+ G
Sbjct: 525 GLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNG---------- 574
Query: 369 DPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEE 428
+ G V+ GK L +E ++ + + YN + Y E+ + E
Sbjct: 575 --------FCMSGRVEGGKRL-----LEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTE 621
Query: 429 VGKKL 433
+ K +
Sbjct: 622 IYKGM 626
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 134/278 (48%), Gaps = 15/278 (5%)
Query: 99 EMGRRRLVNDKTFKIALMT-LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRK 157
EM +R L D AL+ L ELK+ M D G + ++ C+
Sbjct: 380 EMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVG 439
Query: 158 LVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVD 216
+ EA + K+ + + PN + Y L G C GD+ A+++ + M +G E +I +
Sbjct: 440 KMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYN 499
Query: 217 KMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLE 272
+I K ++AM+ + MD+ GL TY +I +C+ ++ +A+++L+
Sbjct: 500 SLINGLCKAGNLEQAMRT-----MIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQ 554
Query: 273 EMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE-EIEK---PDISLYHGLIKGLLRLR 328
EM +GI+ +T + ++ G GR+ +++E +EK P+ + Y+ L+K +
Sbjct: 555 EMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEK 614
Query: 329 RAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK 366
+ T++++ M+ + P +TY +L++GH R K
Sbjct: 615 NMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMK 652
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 128/281 (45%), Gaps = 35/281 (12%)
Query: 139 CEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASK 198
C Y N ++K LC + +A L +++ P+ + YG ++ GYC + +L A K
Sbjct: 254 CSY-----NILLKALCTAGRIKDAHQLFDEMAS--PPDVVTYGIMVHGYCTLSELETAIK 306
Query: 199 IWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWM 258
+ + M G E + +I + +A++V + M V L + + V+
Sbjct: 307 LLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDM-VMHGVVLDAAVFTTVMSGF 365
Query: 259 CKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP----DI 314
C++G ++ A +EM KRG+ AD +T +++I GL G L+EA +V++E+E D
Sbjct: 366 CRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDA 425
Query: 315 SLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNF 374
Y LI G ++ + EA V +M+++ P + TY
Sbjct: 426 VTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTY---------------------- 463
Query: 375 DTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
T GL K G A + + + ++G+E+ F YN ++
Sbjct: 464 -TALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLIN 503
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 85/208 (40%), Gaps = 37/208 (17%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFF 131
N T+N +++ + K+ N++ T+ +M L D T+ + L + +EL + +
Sbjct: 494 NIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLL 553
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAK------------------------YLIL 167
M D G + ++ N ++ C V K Y I
Sbjct: 554 QEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIE 613
Query: 168 K------------LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVV 215
K LS+ + PNE Y LIKG+C ++ EA + M ++GF +
Sbjct: 614 KNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSY 673
Query: 216 DKMIETFFKINKDDEAMKVFQMMRVKRM 243
+ +I K K EA ++F+ MR +R+
Sbjct: 674 NALIRLLNKKKKFTEARRLFEKMRKERL 701
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 165/381 (43%), Gaps = 29/381 (7%)
Query: 72 HNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNF 130
HN T++ +++ + + L L +M + N T L + + + V
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCD 189
M G + + N ++ L EA LI ++ ++ +P+ + YG ++ G C
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCK 233
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
GD A + N M EP + + +I+ K D+A+ +F+ M K + +
Sbjct: 234 RGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRP-NVV 292
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
TY +I +C G+ S A +L +M +R I D T S++I + G+L EA K+ +E+
Sbjct: 293 TYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 310 EK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG------- 358
K P I Y LI G R EA Q+F M+ + C P + +Y L++G
Sbjct: 353 VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRV 412
Query: 359 --------HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY 410
+ +RG G V + T+ + GL +AG A + + +++ GV Y
Sbjct: 413 DEGMELFREMSQRGLVGNT--VTYTTL-IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTY 469
Query: 411 NKFLHYYSN----EEGVVMFE 427
N L E+ +V+FE
Sbjct: 470 NTLLDGLCKNGKLEKAMVVFE 490
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 169/384 (44%), Gaps = 21/384 (5%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVNFFHI 133
+T+ +V+ + K + DL + L +M + +L ++ L + + + +N F
Sbjct: 222 VTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKE 281
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGD 192
M G ++ + ++ LC +A L+ + E I P+ + LI + G
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
L+EA K+++ M +PSI +I F ++ DEA ++F+ M V + + +Y
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM-VSKHCFPDVVSYS 400
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK- 311
+I CK ++ + + EM +RG+ + +T +++I GL G A ++ +E+
Sbjct: 401 TLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSD 460
Query: 312 ---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR--- 365
P+I Y+ L+ GL + + +A VF + + EPT++TY ++++G + K G+
Sbjct: 461 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEG-MCKAGKVED 519
Query: 366 ----------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
KG P V + G + G +A + + G YN +
Sbjct: 520 GWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIR 579
Query: 416 YYSNEEGVVMFEEVGKKLREVGLA 439
+ E+ K++R G A
Sbjct: 580 ARLRDGDREASAELIKEMRSCGFA 603
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 110/231 (47%), Gaps = 27/231 (11%)
Query: 210 PSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKIS 265
PSI K++ K+NK D + + + +M +LG+ TY I+I+ C+R ++
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGE-----QMQNLGMPHNHYTYSILINCFCRRSQLP 133
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLI 321
A +L +M K G E + +TLSS++ G R+ EA +V+++ +P+ ++ LI
Sbjct: 134 LALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLI 193
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG------------RKGP- 368
GL +A EA + M+ +GC+P + TY +++ G L KRG +G
Sbjct: 194 HGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNG-LCKRGDTDLAFILLNKMEQGKL 252
Query: 369 DPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN 419
+P V T + GL K DA + + +G+ Y+ + N
Sbjct: 253 EPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCN 303
>gi|18071401|gb|AAL58260.1|AC068923_2 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 627
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 142/294 (48%), Gaps = 11/294 (3%)
Query: 64 QKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVR 122
Q+ P N +T+N ++ + K++ +D E L M + ++ D T+ +
Sbjct: 110 QRISP----NVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSG 165
Query: 123 ELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYG 181
+ K+ + F M G E + N ++ LC+ EA+ + +++ +KP+ YG
Sbjct: 166 QPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYG 225
Query: 182 WLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK 241
L++GY G L+E + +LM G P+ V ++ + K K +EAM VF MR +
Sbjct: 226 TLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQ 285
Query: 242 RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
++ + TY VID +CK G++ A E+M G+ D++ +S+I+ L + +
Sbjct: 286 GLNPNAV-TYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEK 344
Query: 302 AYKVVEEIEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
A ++ E+ I L ++ +I + R E+ ++F M++ G +P + T
Sbjct: 345 AEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIIT 398
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 100/194 (51%), Gaps = 14/194 (7%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVD--KMIETFFKINKDDEAM 232
P+ +Y L+ G CD EA ++ ++M D+G + DVV +I FFK D+ +
Sbjct: 49 PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKML 108
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
R+ + TY +I +CK + +A +L M K G+ D +T +SI++G
Sbjct: 109 D----QRISP----NVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHG 160
Query: 293 LLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
+ G+ +EA ++++ +PD+ Y+ L+ L + R EA ++F M KRG +P
Sbjct: 161 FCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPD 220
Query: 349 MHTYIMLLQGHLGK 362
+ TY LLQG+ K
Sbjct: 221 ITTYGTLLQGYATK 234
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 127/317 (40%), Gaps = 32/317 (10%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNID---LFWETLQEMGRRRLVNDKTFKIALMTL 118
+++ Q N++T+ ++D++ KS ++ L++E + + G R + + + +L
Sbjct: 279 FSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRP--DSIVYNSLIHSL 336
Query: 119 AEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNE 177
+ +K F M D G S N ++ + C+ V+E+ K L + +KP+
Sbjct: 337 CIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDI 396
Query: 178 IAYG-WLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
I G +L D + I+ M++ G DK ET N + A
Sbjct: 397 ITLGRFLGSARRDYSLFVNIYFIFTNMSNTG--------DKEKETPVNTNGGNTA----- 443
Query: 237 MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR 296
L TY I++ +CK A M + + ++ + T + +I LL
Sbjct: 444 ---SNSSGGPFLGTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKV 500
Query: 297 GRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGC--EPTMH 350
GR EA + P+ Y + + ++ E Q+F M GC + M
Sbjct: 501 GRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGML 560
Query: 351 TYI---MLLQGHLGKRG 364
+I +L +G + + G
Sbjct: 561 NFIVRELLQRGEITRAG 577
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 159/365 (43%), Gaps = 30/365 (8%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHI 133
+T+ MV ++ + L EM R L +N + + L + ++ V
Sbjct: 286 VTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVED 345
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M G + V+ C++ + A+ ++ + + + + Y LI G C G+
Sbjct: 346 MVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGE 405
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
L EA ++ M D+G + +I+ + K+ K EA V M KR+ + TY
Sbjct: 406 LKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTP-NVVTYT 464
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
+ D +CK+G + A +L EM +G+E + T +S+I GL G L +A + + +++
Sbjct: 465 ALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEA 524
Query: 311 --KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGP 368
KPD+ Y +I L + + A + +EM+ +G +PT+ TY +L+ G
Sbjct: 525 GLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNG---------- 574
Query: 369 DPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEE 428
+ G V+ GK L +E ++ + + YN + Y E+ + E
Sbjct: 575 --------FCMSGRVEGGKRL-----LEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTE 621
Query: 429 VGKKL 433
+ K +
Sbjct: 622 IYKGM 626
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 134/278 (48%), Gaps = 15/278 (5%)
Query: 99 EMGRRRLVNDKTFKIALMT-LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRK 157
EM +R L D AL+ L ELK+ M D G + ++ C+
Sbjct: 380 EMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVG 439
Query: 158 LVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVD 216
+ EA + K+ + + PN + Y L G C GD+ A+++ + M +G E +I +
Sbjct: 440 KMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYN 499
Query: 217 KMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLE 272
+I K ++AM+ + MD+ GL TY +I +C+ ++ +A+++L+
Sbjct: 500 SLINGLCKAGNLEQAMRT-----MIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQ 554
Query: 273 EMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE-EIEK---PDISLYHGLIKGLLRLR 328
EM +GI+ +T + ++ G GR+ +++E +EK P+ + Y+ L+K +
Sbjct: 555 EMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEK 614
Query: 329 RAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK 366
+ T++++ M+ + P +TY +L++GH R K
Sbjct: 615 NMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMK 652
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 128/281 (45%), Gaps = 35/281 (12%)
Query: 139 CEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASK 198
C Y N ++K LC + +A L +++ P+ + YG ++ GYC + +L A K
Sbjct: 254 CSY-----NILLKALCTAGRIKDAHQLFDEMAS--PPDVVTYGIMVHGYCTLSELETAIK 306
Query: 199 IWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWM 258
+ + M G E + +I + +A++V + M V L + + V+
Sbjct: 307 LLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDM-VMHGVVLDAAVFTTVMSGF 365
Query: 259 CKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP----DI 314
C++G ++ A +EM KRG+ AD +T +++I GL G L+EA +V++E+E D
Sbjct: 366 CRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDA 425
Query: 315 SLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNF 374
Y LI G ++ + EA V +M+++ P + TY
Sbjct: 426 VTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTY---------------------- 463
Query: 375 DTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
T GL K G A + + + ++G+E+ F YN ++
Sbjct: 464 -TALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLIN 503
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 85/208 (40%), Gaps = 37/208 (17%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFF 131
N T+N +++ + K+ N++ T+ +M L D T+ + L + +EL + +
Sbjct: 494 NIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLL 553
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAK------------------------YLIL 167
M D G + ++ N ++ C V K Y I
Sbjct: 554 QEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIE 613
Query: 168 K------------LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVV 215
K LS+ + PNE Y LIKG+C ++ EA + M ++GF +
Sbjct: 614 KNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSY 673
Query: 216 DKMIETFFKINKDDEAMKVFQMMRVKRM 243
+ +I K K EA ++F+ MR +R+
Sbjct: 674 NALIRLLNKKKKFTEARRLFEKMRKERL 701
>gi|356576704|ref|XP_003556470.1| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
mitochondrial-like isoform 1 [Glycine max]
gi|356576706|ref|XP_003556471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
mitochondrial-like isoform 2 [Glycine max]
Length = 509
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 148/359 (41%), Gaps = 21/359 (5%)
Query: 21 SPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRM 80
S RLH S S + T LQ N S R V F Q+ + P F+H T +
Sbjct: 85 SVSQRLHLSFS--HITPTPNLILQTLNLSHESGRTVLGFHQWLS-SNPQFSHTDDTLSYF 141
Query: 81 VDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMN-DCGC 139
VD G+ ++ + L KT A+ L + V FF M D G
Sbjct: 142 VDYFGRRKDFKATHDVLSAASP--AAGPKTLASAIDRLVRAGRPSQAVQFFERMERDYGL 199
Query: 140 EYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKI 199
+ L VV+ LC + A+ ++ L++ P+E LIKG+C G L EA ++
Sbjct: 200 KRDRASLKVVVEKLCSKGFASYAEKMVKDLAKVFFPDEATCDMLIKGWCVDGKLDEAQRL 259
Query: 200 WNLMTDEGFEPSIDVVDKMIETFFKI--NKD-----DEAMKVFQMMRVKRMDDLGLSTYR 252
M GFE + + M++ K+ KD EA KV M R + T+
Sbjct: 260 AGEMYRGGFELGVGSYNAMLDCVCKLCRQKDPFQLHSEAEKVLVEME-HRGVPRNVETFN 318
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP 312
++I +CK K A + M + G + T +I L RL E ++++ +
Sbjct: 319 VLITNLCKIRKTEDALGLFRSMGEWGCYPNETTFLVLIRSLYQAARLEEGDEMIDRMRSA 378
Query: 313 ------DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
D Y+ L+K L + R A VF M GCEP + TY +L+ G LG R
Sbjct: 379 GFGEFLDKKAYYQLLKILCGIERVDHALSVFAMMKDGGCEPGLITYDLLM-GKLGAHNR 436
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 81/173 (46%), Gaps = 15/173 (8%)
Query: 76 TFNRMVDIIGK-SRNIDLFW------ETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKM 127
++N M+D + K R D F + L EM R + N +TF + + L ++R+ +
Sbjct: 274 SYNAMLDCVCKLCRQKDPFQLHSEAEKVLVEMEHRGVPRNVETFNVLITNLCKIRKTEDA 333
Query: 128 VNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-----SEWIKPNEIAYGW 182
+ F M + GC + ++++L Q + E +I ++ E++ ++ AY
Sbjct: 334 LGLFRSMGEWGCYPNETTFLVLIRSLYQAARLEEGDEMIDRMRSAGFGEFL--DKKAYYQ 391
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
L+K C + + A ++ +M D G EP + D ++ N+ D+A +F
Sbjct: 392 LLKILCGIERVDHALSVFAMMKDGGCEPGLITYDLLMGKLGAHNRIDKANALF 444
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 136/292 (46%), Gaps = 7/292 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N T+N ++D K +D+ EM RR T+ I L L + F
Sbjct: 169 NIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLF 228
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
H M GC + +V L + V EA + ++ + + + + Y L+
Sbjct: 229 HKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKA 288
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G++ K+ M+ +GF P + +++ K NK D A +VF M V+ L +
Sbjct: 289 GNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARM-VESGCKPDLIS 347
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y I+ID + G +QA MLEEM + G + T +S+I+ L G++ EA+ V+EE+E
Sbjct: 348 YNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEME 407
Query: 311 ----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+PD+ Y+ L+ L + + A ++F++M +G EP +Y + + G
Sbjct: 408 TAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDG 459
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 151/320 (47%), Gaps = 31/320 (9%)
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
+P+E YG+L+ G + EA ++ M + G P+I + +++ F K+ + D A+
Sbjct: 132 EPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALG 191
Query: 234 VFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
+F M+ +R + TY I++D +C G++ A + +M G D+ T S+++ GL
Sbjct: 192 LFAEMK-RRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGL 250
Query: 294 LARGRLREAYKVVEEIEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
GR+ EA+KV E+ +++ Y+ L+ L + ++ +EM ++G P
Sbjct: 251 GKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDA 310
Query: 350 HTYIMLLQGHLGKRGR-------------KGPDP-LVNFDTIFVGGLVKAGKSLDAAKYV 395
++ ++ LGK + G P L++++ I + + G + A + +
Sbjct: 311 FSFNTIMDA-LGKANKPDAAREVFARMVESGCKPDLISYN-ILIDSYARFGDAAQARQML 368
Query: 396 ERVMNRGVEVPRFDYNKFLHYYSN----EEGVVMFEEV---GKKLREVGLADLADIFQRY 448
E ++ G YN +H+ + +E + EE+ G + V L D+ +
Sbjct: 369 EEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKR 428
Query: 449 GK-KMATR--ERRRNRAIEP 465
G+ + A R ++ +++ +EP
Sbjct: 429 GENQRAARLFQQMKDKGVEP 448
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 122/262 (46%), Gaps = 11/262 (4%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFF 131
+S T++ +V+ +GKS ++ + +EM R + D + L TLA+ + ++
Sbjct: 239 DSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLM 298
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
M+ G N ++ L + A+ + ++ E KP+ I+Y LI Y
Sbjct: 299 KEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARF 358
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK--RMDDLGL 248
GD +A ++ M + GF P + +I + DEA V + M R D +
Sbjct: 359 GDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPD---V 415
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA---YKV 305
TY ++D + KRG+ +A + ++M +G+E D L+ + I GL RL EA +K
Sbjct: 416 VTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKD 475
Query: 306 VEEIEKP-DISLYHGLIKGLLR 326
++ + P D ++Y LI+ R
Sbjct: 476 MKAVGCPVDKAMYRILIRAAHR 497
>gi|297828902|ref|XP_002882333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328173|gb|EFH58592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 506
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 170/382 (44%), Gaps = 39/382 (10%)
Query: 33 CN-FNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNID 91
CN NL+ ++ + F W+ + + + H++ ++ VDI+GK++ D
Sbjct: 78 CNRVNLSDGLVYKLLHRFRDDWKSALGVLNWAESCKG-HKHSNDAYDMAVDILGKAKKWD 136
Query: 92 LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVK 151
++ M +LV T + A E ++ V F + + G E + E +N ++
Sbjct: 137 RLKVFVERMRGDKLVTLNTIAKIMRRFAGAGEWEEAVGIFDKLGEFGLEKNTESMNLLLD 196
Query: 152 TLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNL--MTDEGFE 209
TLC+ K V +A+ ++L+L I PN + I G+C + EA +W + M GF
Sbjct: 197 TLCKEKRVEQARVVLLELKSHITPNAHTFNIFIHGWCKANRVEEA--LWTIQEMKGHGFR 254
Query: 210 PSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKIS 265
P + +I + + E +KV++M+ M+ G TY ++ + + +
Sbjct: 255 PCVISYTTIIRCYC---QQSEFVKVYEML--SEMEANGSPPNSITYTTIMSSLNAQKEFE 309
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDI------SLYHG 319
+A + M + G + D+L + +I+ L GRL EA +V +E P++ S Y+
Sbjct: 310 EALRVATRMKRSGCQPDSLFYNCLIHTLARSGRLEEAERVF-RVEMPELGVSINTSTYNS 368
Query: 320 LIKGLLRLRRAREATQVFREMIKRG-CEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIF 378
+I +A ++ +EM C P +HTY LL+ KRG D +
Sbjct: 369 MIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCF-KRG----------DVVE 417
Query: 379 VGGLVKA-----GKSLDAAKYV 395
VG L+K SLD + Y
Sbjct: 418 VGKLLKEMVTKHHLSLDESTYT 439
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 87/217 (40%), Gaps = 8/217 (3%)
Query: 67 QPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALMTLAEVRELK 125
+PC I++ ++ + +E L EM N T+ + +L +E +
Sbjct: 254 RPCV----ISYTTIIRCYCQQSEFVKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFE 309
Query: 126 KMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEW-IKPNEIAYGWL 183
+ + M GC+ N ++ TL + + EA+ + +++ E + N Y +
Sbjct: 310 EALRVATRMKRSGCQPDSLFYNCLIHTLARSGRLEEAERVFRVEMPELGVSINTSTYNSM 369
Query: 184 IKGYCDVGDLIEASKIWNLMTDEGF-EPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
I YC + +A ++ M P + ++ + FK E K+ + M K
Sbjct: 370 IAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKH 429
Query: 243 MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGI 279
L STY +I +C+ AY + EEM + I
Sbjct: 430 HLSLDESTYTFLIQRLCRANICEWAYCLFEEMISQDI 466
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 131/292 (44%), Gaps = 34/292 (11%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+TF+ ++D+ K + E EM R + D T+ + + L + F +
Sbjct: 316 VTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDL 375
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGD 192
M GCE + + ++ + C+ K V + L ++S + + PN I Y L+ G+C G
Sbjct: 376 MVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK 435
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
L A +++ M G PS+ +++ + ++A+++F+ M+ RM LG+ Y
Sbjct: 436 LNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT-LGIGIYN 494
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP 312
I+I MC K+ A+++ + +G+ KP
Sbjct: 495 IIIHGMCNASKVDDAWSLFCSLSDKGV-------------------------------KP 523
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
D+ Y+ +I GL + EA +FR+M + GC P TY +L++ HLG G
Sbjct: 524 DVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSG 575
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 164/376 (43%), Gaps = 25/376 (6%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTL 118
F+ +++P I FNR+ + +++ DL + M + +D + + +M
Sbjct: 57 LFESMIQSRP--LPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHD-MYTMTIMIN 113
Query: 119 AEVRELKKMVNFFHIMNDC---GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IK 174
R+ KK++ F ++ G E + +V C V EA L+ ++ E +
Sbjct: 114 CYCRK-KKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR 172
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+ + LI G C G + EA + + M + GF+P ++ K A+ +
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 232
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
F+ M +R + Y IVID +CK G A ++ EM +GI+AD +T SS+I GL
Sbjct: 233 FRKME-ERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLC 291
Query: 295 ARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
G+ + K++ E+ PD+ + LI ++ + EA +++ EMI RG P
Sbjct: 292 NDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTI 351
Query: 351 TYIMLLQGHLGKRG------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERV 398
TY L+ G + KG +P + +I + KA + D + +
Sbjct: 352 TYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREI 411
Query: 399 MNRGVEVPRFDYNKFL 414
++G+ YN +
Sbjct: 412 SSKGLIPNTITYNTLV 427
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 135/286 (47%), Gaps = 29/286 (10%)
Query: 159 VVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDK 217
++EAK L ++ + I P+ I Y LI G+C L EA+++++LM +G EP I
Sbjct: 331 LLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSI 390
Query: 218 MIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKR 277
+I ++ K + D+ M++F+ + K + + TY ++ C+ GK++ A + +EM R
Sbjct: 391 LINSYCKAKRVDDGMRLFREISSKGLIPNTI-TYNTLVLGFCQSGKLNAAKELFQEMVSR 449
Query: 278 GIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP----DISLYHGLIKGLLRLRRAREA 333
G+ +T ++ GL G L +A ++ E+++K I +Y+ +I G+ + +A
Sbjct: 450 GVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDA 509
Query: 334 TQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAK 393
+F + +G +P + TY + +GGL K G +A
Sbjct: 510 WSLFCSLSDKGVKPDVVTY-----------------------NVMIGGLCKKGSLSEADM 546
Query: 394 YVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLA 439
++ G F YN + + G++ E+ ++++ G +
Sbjct: 547 LFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFS 592
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/393 (23%), Positives = 161/393 (40%), Gaps = 56/393 (14%)
Query: 49 FPLSWRPVYLFFQYTQKAQPCFAHNSIT----------FNRMVDIIGKSRNIDLFWETLQ 98
PL+ R F Q +K ++SIT N +VDI + IDLF +Q
Sbjct: 6 IPLN-RKASNFTQILEKGTSLLHYSSITEAKLSYKERLRNGIVDI-KVNDAIDLFESMIQ 63
Query: 99 EMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKL 158
R L F +A ++ ++ F M G E+ + + ++ C++K
Sbjct: 64 S---RPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKK 120
Query: 159 VVEAKYLILKLSEW---IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVV 215
++ A ++ + W +P+ I + L+ G+C G + EA + + M + P + V
Sbjct: 121 LLFAFSVLGR--AWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTV 178
Query: 216 DKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTML 271
+I + EA+ + + RM + G TY V++ +CK G + A +
Sbjct: 179 STLINGLCLKGRVSEAL-----VLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF 233
Query: 272 EEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRL 327
+M +R I+A + S +I L G +A + E+E K D+ Y LI GL
Sbjct: 234 RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCND 293
Query: 328 RRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGK 387
+ + ++ REMI R P + T+ L+ +FV K GK
Sbjct: 294 GKWDDGAKMLREMIGRNIIPDVVTFSALID-------------------VFV----KEGK 330
Query: 388 SLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE 420
L+A + ++ RG+ YN + + E
Sbjct: 331 LLEAKELYNEMITRGIAPDTITYNSLIDGFCKE 363
>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
Length = 703
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 146/308 (47%), Gaps = 16/308 (5%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEV 121
Y++ + ++ +N +V ++ + W+ G L N +T+ I + L +
Sbjct: 322 YSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDS 381
Query: 122 RELKKMVNFFHIM-NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEI-A 179
+ + + + ++ D C ++ LCQ +A + + K ++ +
Sbjct: 382 GMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFS 441
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
Y +I G C+VG L++A K++ M +G +P+ + + +I F ++ + +A++++
Sbjct: 442 YSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYS--- 498
Query: 240 VKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
+M D G S TY +ID +CK K +A ++ EM + G D T S+I GL +
Sbjct: 499 --KMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFS 556
Query: 296 RGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMI-KRGCEPTMH 350
++ +A + ++I K D+ +++ LI GL + EA VF +M K+ C P +
Sbjct: 557 DKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLV 616
Query: 351 TYIMLLQG 358
TY L+ G
Sbjct: 617 TYNTLMDG 624
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/419 (23%), Positives = 189/419 (45%), Gaps = 57/419 (13%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLA-EVRELKKMVN 129
A + IT++ ++ + K +D + L EM R R+ D AL+ + E +K++
Sbjct: 190 APDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMR 249
Query: 130 FFH-IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGY 187
+ ++ D G +L N ++ LC+ E + ++ + ++P+ I YG LI G
Sbjct: 250 VWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGL 309
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV-----FQMMR--- 239
C GD+ A+++++ + G + + +++ F + + EA K F +R
Sbjct: 310 CRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLR 369
Query: 240 -----VKRMDDLGL---------------------STYRIVIDWMCKRGKISQAYTMLEE 273
+K + D G+ T+ +I +C+ G ++A+T+ EE
Sbjct: 370 TYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEE 429
Query: 274 MFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRR 329
G + D + SS+I GL GRL +A KV E+++ KP+ +Y+ LI G ++ R
Sbjct: 430 ARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYR 489
Query: 330 AREATQVFREMIKRGCEPTMHTYIMLLQG--------HLGKRGRK----GPDPLVNFDTI 377
+A +++ +M GC PT+ TY L+ G R+ G P +
Sbjct: 490 TSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGS 549
Query: 378 FVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN----EEGVVMFEEVGKK 432
+ GL K DA ++++ +G++V +N +H + +E + +F ++ +K
Sbjct: 550 LIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEK 608
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 117/247 (47%), Gaps = 7/247 (2%)
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPN 176
L V L V + M+ GC+ + + N ++ CQ +A + K+++ P
Sbjct: 449 LCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPT 508
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
I Y LI G C EAS + M + GF P I +I F K D+A+ +++
Sbjct: 509 VITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWK 568
Query: 237 MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMF-KRGIEADNLTLSSIIYGLLA 295
+ K + + + + I+I +C GK+ +A + +M K+ + +T ++++ GL
Sbjct: 569 QILYKGLK-VDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYE 627
Query: 296 RGRLREAY----KVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
G + +A + E+ +PDI Y+ IKGL R E Q+ E++ RG PT+ T
Sbjct: 628 TGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVIT 687
Query: 352 YIMLLQG 358
+ +L++
Sbjct: 688 WNILVRA 694
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 106/225 (47%), Gaps = 5/225 (2%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
N + + +V V + M D GC ++ N ++ LC+ + EA +
Sbjct: 473 NSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVA 532
Query: 167 LKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI 225
++ E P+ YG LI+G + +A IW + +G + + + + +I
Sbjct: 533 REMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSA 592
Query: 226 NKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
K DEA+ VF M+ K+ L TY ++D + + G I +A T+ + + G+E D ++
Sbjct: 593 GKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIIS 652
Query: 286 LSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLR 326
++ I GL + R+ E ++++E+ P + ++ L++ +++
Sbjct: 653 YNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIK 697
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 114/259 (44%), Gaps = 25/259 (9%)
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR---VKRMDDLGLSTYRIVIDWMCKRGK 263
G P I + +++ F + + +A F + R L TY IV+ +C RG
Sbjct: 114 GCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGD 173
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHG 319
+ +A T+ + + +R + D +T S+++ GL + RL A +++E+ + PD+ Y+
Sbjct: 174 LDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNA 233
Query: 320 LIKGLLRLRRAREATQVFREMIKR-GCEPTMHTYIMLLQGHLGKRGR------------- 365
L+ G + + +V+ +++K G P + TY ++L G L K GR
Sbjct: 234 LLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDG-LCKFGRFKEVGEVWERMVA 292
Query: 366 KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVM 425
P V I + GL ++G AA+ ++ G+ + YN + + V
Sbjct: 293 NNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRV-- 350
Query: 426 FEEVGKKLREVGLADLADI 444
+E K G A L ++
Sbjct: 351 -QEAWKFWDSAGFAGLRNL 368
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/298 (20%), Positives = 120/298 (40%), Gaps = 51/298 (17%)
Query: 105 LVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKY 164
LV F A+M A + + + + GC + N ++ + + +A
Sbjct: 87 LVVLSAFSRAIMPDAALDAFRALPSIL------GCNPGIRSHNALLDAFVRARRFSDADA 140
Query: 165 LILKLSEW-----IKPNEIAYGWLIKGYCDVGDLIEASKIWN------------------ 201
LS I PN Y +++ C GDL A +++
Sbjct: 141 FFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLM 200
Query: 202 --LMTDEGFEPSIDVVDKMIET---------------FFKINKDDEAMKVFQMMRVKRMD 244
L + + ++D++D+M + FK + ++ M+V+ +
Sbjct: 201 CGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGA 260
Query: 245 DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK 304
L+TY +++D +CK G+ + + E M ++ D +T +I+GL G + A +
Sbjct: 261 RPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAAR 320
Query: 305 VVEEIEKP----DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
V EI K D ++Y+ L+KG + R +EA + + G + TY ++++G
Sbjct: 321 VYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKG 377
>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74580
gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 176/390 (45%), Gaps = 24/390 (6%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVN---DKTFKIALMTLAEVRELKK 126
F H T+ +++ +G + E L +M R + N + + A+ ++++
Sbjct: 36 FKHTLSTYRSVIEKLGYYGKFEAMEEVLVDM-RENVGNHMLEGVYVGAMKNYGRKGKVQE 94
Query: 127 MVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIK 185
VN F M+ CE ++ N ++ L +A + +++ + I P+ ++ +K
Sbjct: 95 AVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMK 154
Query: 186 GYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD 245
+C A ++ N M+ +G E ++ ++ F++ N E ++F M +
Sbjct: 155 SFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVS- 213
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
L LST+ ++ +CK+G + + +L+++ KRG+ + T + I GL RG L A ++
Sbjct: 214 LCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRM 273
Query: 306 V----EEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG 361
V E+ KPD+ Y+ LI GL + + +EA +M+ G EP +TY L+ G+
Sbjct: 274 VGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYC- 332
Query: 362 KRGRKGPDPLVNFDTIFVG-------------GLVKAGKSLDAAKYVERVMNRGVEVPRF 408
K G + D +F G GL G++ A + +G++
Sbjct: 333 KGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVI 392
Query: 409 DYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
YN + SN+ ++ ++ ++ E GL
Sbjct: 393 LYNTLIKGLSNQGMILEAAQLANEMSEKGL 422
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 152/363 (41%), Gaps = 28/363 (7%)
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYC 188
F M G L NK+++ LC++ V E + L+ K + + PN Y I+G C
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLC 262
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
G+L A ++ + ++G +P + + +I K +K EA +V+ V +
Sbjct: 263 QRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEA-EVYLGKMVNEGLEPDS 321
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY +I CK G + A ++ + G D T S+I GL G A + E
Sbjct: 322 YTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNE 381
Query: 309 IE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
KP++ LY+ LIKGL EA Q+ EM ++G P + T+ +L+ G
Sbjct: 382 ALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGC 441
Query: 365 RKGPDPLVN-------FDTIFVGGLVKAGKSL-----DAAKYVERVMNRGVEVPRFDYNK 412
D LV F IF ++ G S +A + ++ +++ GV+ + YN
Sbjct: 442 VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNS 501
Query: 413 FLHYYSNEEGVVMFEEVGKKLREVGLAD-------LADIFQRYGK---KMATRERRRNRA 462
L+ E K + E G A L + RY K + E +N++
Sbjct: 502 LLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKS 561
Query: 463 IEP 465
+ P
Sbjct: 562 VNP 564
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 140/299 (46%), Gaps = 14/299 (4%)
Query: 70 FAHNSITFNRMVDIIG----KSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELK 125
F + T+ ++D + +R + LF E L + + ++ T L + E
Sbjct: 352 FVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAA 411
Query: 126 KMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLI 184
++ N M++ G ++ N +V LC+ V +A L+ + +S+ P+ + LI
Sbjct: 412 QLAN---EMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 468
Query: 185 KGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD 244
GY + A +I ++M D G +P + + ++ K +K ++ M+ ++ M V++
Sbjct: 469 HGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTM-VEKGC 527
Query: 245 DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK 304
L T+ I+++ +C+ K+ +A +LEEM + + D +T ++I G G L AY
Sbjct: 528 APNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYT 587
Query: 305 VVEEIEKP-----DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+ ++E+ Y+ +I A ++F+EM+ R P +TY +++ G
Sbjct: 588 LFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDG 646
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 102/243 (41%), Gaps = 40/243 (16%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T+ L L + + + ++ + M + GC +L N ++++LC+ + + EA L+ ++
Sbjct: 498 TYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEM 557
Query: 170 -SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++ + P+ + +G LI G+C GDL A ++ M
Sbjct: 558 KNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM------------------------- 592
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
+EA KV TY I+I ++ ++ A + +EM R + D T
Sbjct: 593 EEAYKVSS----------STPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRL 642
Query: 289 IIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
++ G G + YK + E+ + P ++ +I L R EA + M+++G
Sbjct: 643 MVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKG 702
Query: 345 CEP 347
P
Sbjct: 703 LVP 705
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 163/385 (42%), Gaps = 21/385 (5%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
+ + + N ++ + +R+ +M VN T+ + L + R L + +
Sbjct: 42 LSPDPVELNTILAELCDARDTTTAMALFDKMAELGAVNHTTYYNLIHPLCKARLLDEAMG 101
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCD 189
M G + N V+ LC+ + A + ++++ P+ + Y L+ G
Sbjct: 102 LLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHPPDFLTYTKLVHGLSK 161
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
G L +A ++ M P + ++++ ++ D+A ++ + M + M +
Sbjct: 162 AGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAI- 220
Query: 250 TYRIVIDWMCKRGKISQAYTML-EEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY ++D +CK ++ +A +L E+ +RG D +T S++I GL GRLR+A + EE
Sbjct: 221 TYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEE 280
Query: 309 IE-KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK- 366
+ P Y+ LI G R EA ++ +M+ C P + TY L+ K GR
Sbjct: 281 MSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFC-KMGRLD 339
Query: 367 --------------GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNK 412
PD +V F T V GL G+ DA + +E + RG + YN
Sbjct: 340 DAYELFQQMVANKLSPD-VVTF-TSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNC 397
Query: 413 FLHYYSNEEGVVMFEEVGKKLREVG 437
+ Y V EE+ R G
Sbjct: 398 VVDGYCKSNQVRKAEELVADFRSRG 422
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 137/340 (40%), Gaps = 67/340 (19%)
Query: 70 FAHNSITFNRMVDIIGKSRNID-LFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKM 127
A N+IT++ +VD + K +D L E+ RR D T+ + L + L+
Sbjct: 215 MAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDA 274
Query: 128 VNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGY 187
V+ F M+ P I Y LI GY
Sbjct: 275 VDIFEEMS-------------------------------------CAPTAITYNSLIGGY 297
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C GD+ EA ++ M D+ P + ++ F K+ + D+A ++FQ M ++
Sbjct: 298 CRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSP-D 356
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
+ T+ ++D +C G++ A +LEE+ +RG T + ++ G ++R+A ++V
Sbjct: 357 VVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVA 416
Query: 308 EIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
+ P+ Y+ L+ G R R +A Q ++ G
Sbjct: 417 DFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEG------------------- 457
Query: 364 GRKGPDPL-VNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
GP P V I + L + G++ DA ++ E ++ RG
Sbjct: 458 ---GPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRG 494
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 109/243 (44%), Gaps = 5/243 (2%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVN 129
A + IT+ ++ K +D +E Q+M +L D TF + L ++ +
Sbjct: 319 APDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALE 378
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYC 188
+ GC ++ N VV C+ V +A+ L+ S PN + Y L+ G C
Sbjct: 379 LLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCC 438
Query: 189 DVGDLIEASKIWNLMTDEG--FEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
G +A + + + EG S+ + +++ + + D+A++ ++ M ++R
Sbjct: 439 RAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEM-IQRGYVP 497
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
+T+ V+ +CK + QA+ +LEEM K G T +++ G +++A ++
Sbjct: 498 AAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELA 557
Query: 307 EEI 309
E+
Sbjct: 558 SEL 560
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 130/290 (44%), Gaps = 25/290 (8%)
Query: 146 LNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
N V+ LCQ+ V+E+ L+ K L + N+ I+G C+ G L EA + M
Sbjct: 214 FNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERM- 272
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM--DDLGLSTYRIVIDWMCKRG 262
P + + ++ K +K EA + M + DD TY +ID CK G
Sbjct: 273 GAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDF---TYNTIIDGYCKSG 329
Query: 263 KISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYH 318
+ +A +L++ +G D +T S+I GL A G + A ++ E + KPD+ +Y+
Sbjct: 330 MLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYN 389
Query: 319 GLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIF 378
L+KGL R A QV EM++ GC P + TY +++ G L K G +V D I
Sbjct: 390 SLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIING-LCKMGNISDAAVVMNDAIV 448
Query: 379 VG-------------GLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
G G K K A + VER+ G+ YN L+
Sbjct: 449 KGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLN 498
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 96/191 (50%), Gaps = 7/191 (3%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
+KP+ + Y L+KG C G ++ A ++ N M +EG P I + +I K+ +A
Sbjct: 381 LKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAA 440
Query: 233 KVFQMMRVKR-MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
V VK + D+ T+ +ID CKR K+ A ++E M+ GI D +T +S++
Sbjct: 441 VVMNDAIVKGYLPDV--FTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLN 498
Query: 292 GLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
GL G+ +E + EE+ +P+ Y+ LI+ ++ + EA+ V M + G P
Sbjct: 499 GLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVP 558
Query: 348 TMHTYIMLLQG 358
++ L+ G
Sbjct: 559 DAVSFNTLIHG 569
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 115/253 (45%), Gaps = 5/253 (1%)
Query: 111 FKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKL 169
+ ++ A L+ V+ F M+ C + N ++ L +A K + L
Sbjct: 74 YVASIQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRML 133
Query: 170 SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD 229
+ + P+ + +K +C G A ++ +++ G + ++ +
Sbjct: 134 AAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGY 193
Query: 230 EAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSI 289
A +F M + R ++T+ V+ +C++G + ++ +L ++ KRG+ A+ T +
Sbjct: 194 NARHLFDEM-LGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIW 252
Query: 290 IYGLLARGRLREAYKVVEEIE---KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
I GL GRL EA +VE + PD+ Y+ L++GL + + +EA Q M+ +GC
Sbjct: 253 IRGLCEDGRLEEAVALVERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCI 312
Query: 347 PTMHTYIMLLQGH 359
P TY ++ G+
Sbjct: 313 PDDFTYNTIIDGY 325
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/354 (20%), Positives = 159/354 (44%), Gaps = 44/354 (12%)
Query: 45 ICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRR 104
+C + + YL Q P + T+N ++D KS + E L++ +
Sbjct: 290 LCKDSKVQEAAQYLGRMMNQGCIP----DDFTYNTIIDGYCKSGMLQEATELLKDAVFKG 345
Query: 105 LVNDKTFKIALMT-LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAK 163
V D+ +L+ L ++++ + F+ + L + N +VK LC++ L++ A
Sbjct: 346 FVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHAL 405
Query: 164 YLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETF 222
++ ++ E P+ Y +I G C +G++ +A+ + N +G+ P + + +I+ +
Sbjct: 406 QVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGY 465
Query: 223 FKINKDDEAMKVFQMM-----------------------RVKRMDDL-----------GL 248
K K D A+++ + M + K +++
Sbjct: 466 CKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNA 525
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY I+I+ CK ++ +A ++ M + G+ D ++ +++I+G G L AY + ++
Sbjct: 526 ITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQK 585
Query: 309 IEKPDIS----LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+++ S ++ LI + A ++F EMI +G +P ++TY +L+ G
Sbjct: 586 LDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDG 639
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 109/234 (46%), Gaps = 3/234 (1%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIM 134
TFN ++D K +D + ++ M + D T+ L L + + K++ F M
Sbjct: 457 TFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEM 516
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDL 193
GC + N +++ C+ + EA +I+++ + + P+ +++ LI G+C GDL
Sbjct: 517 ILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDL 576
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
A ++ + ++G+ + D + +I + A K+F M + + L TYRI
Sbjct: 577 DGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEM-ISKGYKPDLYTYRI 635
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
++D +CK + +AY L EM +G T ++ L R+ EA ++
Sbjct: 636 LVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIH 689
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 104/221 (47%), Gaps = 14/221 (6%)
Query: 146 LNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
N ++ C+R + A L+ ++ + I P+ I Y ++ G C G E ++ + M
Sbjct: 458 FNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMI 517
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCK 260
+G P+ + +IE F KIN+ +EA V + RM GL ++ +I C+
Sbjct: 518 LKGCRPNAITYNILIENFCKINQLEEASGV-----IVRMCQDGLVPDAVSFNTLIHGFCR 572
Query: 261 RGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISL 316
G + AY + +++ ++G A T + +I ++ ++ A K+ E+ KPD+
Sbjct: 573 NGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYT 632
Query: 317 YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
Y L+ GL + A EMI +G P+M T+ +L
Sbjct: 633 YRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLN 673
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 118/276 (42%), Gaps = 27/276 (9%)
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMM 238
Y I+ Y G L A + M P+ + +++ D+A KV+ +M+
Sbjct: 74 YVASIQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRML 133
Query: 239 RVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR 298
D T+ + + C G+ A +L + +RG +A +++ GL A G
Sbjct: 134 AAGVAPDA--RTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGH 191
Query: 299 LREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIM 354
A + +E+ PD++ ++ ++ L + E+ + +++KRG T +
Sbjct: 192 GYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNI 251
Query: 355 LLQGHLGKRGR--------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMN 400
++G L + GR PD +V ++T+ + GL K K +AA+Y+ R+MN
Sbjct: 252 WIRG-LCEDGRLEEAVALVERMGAYVAPD-VVTYNTL-MRGLCKDSKVQEAAQYLGRMMN 308
Query: 401 RGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREV 436
+G F YN + Y M +E + L++
Sbjct: 309 QGCIPDDFTYNTIIDGYCKSG---MLQEATELLKDA 341
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 97/227 (42%), Gaps = 18/227 (7%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N+IT+N +++ K ++ + M + LV D +F + +L F
Sbjct: 524 NAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLF 583
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQR-KLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDV 190
+++ G + + N ++ + + + K +S+ KP+ Y L+ G C
Sbjct: 584 QKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKA 643
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM----RVKRMDDL 246
++ A M +GF PS+ +M+ ++ EA+ + +M V + D
Sbjct: 644 ANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVPEVVDT 703
Query: 247 GLST-------YRIVIDWMCKRGKIS-QAYTMLEEMFKRGIEADNLT 285
LST +I+++ + K+G IS +AY +L E G+ + LT
Sbjct: 704 ILSTDKKEIAAPKILVEELMKKGHISYRAYEVLHE----GVRDNKLT 746
>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 707
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 152/332 (45%), Gaps = 49/332 (14%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDL--FWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKK 126
FA N +N ++ G RN++ L+EM + L+ D ++ + E +EL+K
Sbjct: 138 FAFNVYNYNILLK--GLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEK 195
Query: 127 MVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK------------------ 168
+ + M GC +SL ++ C+ + EA L+ +
Sbjct: 196 ALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIR 255
Query: 169 ------------------LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEP 210
L P I Y LI+G+C +G L EAS+I+ M + G P
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRP 315
Query: 211 SIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTM 270
++ +I+ + K EA+++ +M +++ ++ + TY I+I+ +CK ++ A +
Sbjct: 316 NVYTYTGLIDGLCGVGKTKEALQLLNLM-LQKDEEPNVVTYNIIINKLCKDSLVADALEI 374
Query: 271 LEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV------EEIEKPDISLYHGLIKGL 324
+E M KR DN+T +S++ GL A+G L EA K++ PD+ ++ LI GL
Sbjct: 375 VELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGL 434
Query: 325 LRLRRAREATQVFREMIKR-GCEPTMHTYIML 355
+ R +A ++ ++++ G + T I+L
Sbjct: 435 CKGNRLHQALDIYDLLVEKLGAGDIVTTNILL 466
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 121/275 (44%), Gaps = 17/275 (6%)
Query: 156 RKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVV 215
RK L L L N Y L+KG C + +A + M P +
Sbjct: 121 RKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSY 180
Query: 216 DKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMF 275
+ +I F + + ++A+++ M+ L T+ I+ID CK GK+ +A +L+EM
Sbjct: 181 NTVIRGFCEGKELEKALQLANEMQGSGCS-WSLVTWGILIDAFCKAGKMDEAMGLLKEMK 239
Query: 276 KRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAR 331
+G+EAD + +S+I G G L + +E+ + P Y+ LI+G +L R +
Sbjct: 240 HKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLK 299
Query: 332 EATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG------------RKGPDPLVNFDTIFV 379
EA+++F M++RG P ++TY L+ G G +K +P V I +
Sbjct: 300 EASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIII 359
Query: 380 GGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
L K DA + VE + R YN L
Sbjct: 360 NKLCKDSLVADALEIVELMKKRRTRPDNITYNSLL 394
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 105/246 (42%), Gaps = 43/246 (17%)
Query: 147 NKVVKTLCQRKLVVEAK---YLILKLSEWIKPNEIAYGWLIKGYC--------------- 188
N ++ LC + + EA YL+LK S + P+ I++ LI G C
Sbjct: 391 NSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLL 450
Query: 189 -------DV-------------GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
D+ GD+ +A ++W +++ P+ D MI+ F K
Sbjct: 451 VEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGML 510
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
+ A + MR+ + + Y ++ +CK+G + QA+ + EEM + D ++ +
Sbjct: 511 NVAKGLLCKMRLSELPP-SVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNI 569
Query: 289 IIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+I G L G ++ A ++ + PD+ Y LI L+L EA F +MI G
Sbjct: 570 MIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSG 629
Query: 345 CEPTMH 350
EP H
Sbjct: 630 FEPDAH 635
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 121/273 (44%), Gaps = 27/273 (9%)
Query: 56 VYLFFQYTQKAQPCFAHNSITFNRMVDIIGKS----RNIDLFWETLQEMGRRRLVNDKTF 111
+YL + + P + I+FN ++ + K + +D++ ++++G +V T
Sbjct: 410 LYLMLKDSSYTDP----DVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIV---TT 462
Query: 112 KIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK--L 169
I L + + ++ K + + +++ + + ++ C+ ++ AK L+ K L
Sbjct: 463 NILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRL 522
Query: 170 SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKIN--K 227
SE + P+ Y L+ C G L +A +++ M + P + + MI+ K K
Sbjct: 523 SE-LPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIK 581
Query: 228 DDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADN 283
E++ V M GLS TY +I+ K G + +A + ++M G E D
Sbjct: 582 SAESLLV-------GMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDA 634
Query: 284 LTLSSIIYGLLARGRLREAYKVVEEIEKPDISL 316
S++ +++G + + V+++ D+ L
Sbjct: 635 HICDSVLKYCISQGETDKLTEFVKKLVDKDVVL 667
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 156/347 (44%), Gaps = 22/347 (6%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
N T+ + L +V + M C+ ++ + + ++ +LC+ + V EA +
Sbjct: 174 NVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIF 233
Query: 167 LKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI 225
++ ++ I PN + Y LI G C + + + + N M D P + ++ +++ K
Sbjct: 234 SEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKE 293
Query: 226 NKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
EA V MM + R + + TY ++D C R ++ A + + M + A+ ++
Sbjct: 294 GMVAEAHDVVDMM-IHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVIS 352
Query: 286 LSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMI 341
+++I G + +A + EE+ + P+ Y+ LI GL + R ++A +F EM+
Sbjct: 353 YNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMV 412
Query: 342 KRGCEPTMHTYIMLL-----QGHLGK-----RGRKGP--DPLVNFDTIFVGGLVKAGKSL 389
RG P + TY L HL K + +G DP + T + G+ +AG+
Sbjct: 413 ARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELE 472
Query: 390 DAAKYVERVMNRGVEVPRFDYNKFLHYYSNE----EGVVMFEEVGKK 432
DA + ++G++ + YN +H + E +F E+ K
Sbjct: 473 DARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKN 519
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 156/353 (44%), Gaps = 22/353 (6%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
+++ FNR++ I K+++ ++M + D T I + +L + + +
Sbjct: 69 STVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSAL 128
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
+ G + +++ LC + EA +L K+ E +PN + YG LI G C V
Sbjct: 129 AKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKV 188
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G+ A ++ M +P++ V +I++ K + EA +F M K + + T
Sbjct: 189 GNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISP-NIVT 247
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI- 309
Y +I +CK + T++ EM I D TL++++ L G + EA+ VV+ +
Sbjct: 248 YNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMI 307
Query: 310 ---EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------- 359
+P++ Y+ L+ G A +VF M+ + C + +Y L+ G+
Sbjct: 308 HRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVD 367
Query: 360 -----LGKRGRKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
+ R+ P V ++T+ + GL G+ DA ++ RG ++P
Sbjct: 368 KAMYLFEEMSRQELTPNTVTYNTL-IHGLCHVGRLQDAISLFHEMVARG-QIP 418
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 146/328 (44%), Gaps = 40/328 (12%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
N + F+ ++D + K R + + EM + + N T+ + L ++ E K +
Sbjct: 209 NVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLM 268
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDV 190
+ M D + LN VV LC+ +V EA ++ + + ++PN + Y L+ G+C
Sbjct: 269 NEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLR 328
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM------------ 238
++ A K+++ M + ++ + +I + KI D+AM +F+ M
Sbjct: 329 NEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTY 388
Query: 239 --------RVKRMDDL--------------GLSTYRIVIDWMCKRGKISQAYTMLEEMFK 276
V R+ D L TYR + D++CK + +A +L+ +
Sbjct: 389 NTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEG 448
Query: 277 RGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRARE 332
+ D ++I+ G+ G L +A + + +P++ Y+ +I GL + E
Sbjct: 449 SNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAE 508
Query: 333 ATQVFREMIKRGCEPTMHTYIMLLQGHL 360
A+++F EM K GC P TY ++ +G L
Sbjct: 509 ASKLFSEMNKNGCSPNDCTYNLITRGFL 536
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 135/295 (45%), Gaps = 8/295 (2%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVR-ELKKMVNFFHIM 134
T N +VD + K + + + M R + + ALM +R E+ V F M
Sbjct: 282 TLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTM 341
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDL 193
C ++ N ++ C+ + V +A YL ++S + + PN + Y LI G C VG L
Sbjct: 342 VHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRL 401
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
+A +++ M G P + + + K D+AM + + + D + Y
Sbjct: 402 QDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDP-DIQIYTT 460
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK-- 311
++D MC+ G++ A + + +G++ + T + +I+GL +G L EA K+ E+ K
Sbjct: 461 ILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNG 520
Query: 312 --PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
P+ Y+ + +G LR A ++ EM+ RG + T +L+ G L G
Sbjct: 521 CSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLV-GMLSDDG 574
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 156/347 (44%), Gaps = 22/347 (6%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
N T+ + L +V + M C+ ++ + + ++ +LC+ + V EA +
Sbjct: 174 NVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIF 233
Query: 167 LKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI 225
++ ++ I PN + Y LI G C + + + + N M D P + ++ +++ K
Sbjct: 234 SEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKE 293
Query: 226 NKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
EA V MM + R + + TY ++D C R ++ A + + M + A+ ++
Sbjct: 294 GMVAEAHDVVDMM-IHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVIS 352
Query: 286 LSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMI 341
+++I G + +A + EE+ + P+ Y+ LI GL + R ++A +F EM+
Sbjct: 353 YNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMV 412
Query: 342 KRGCEPTMHTYIMLL-----QGHLGK-----RGRKGP--DPLVNFDTIFVGGLVKAGKSL 389
RG P + TY L HL K + +G DP + T + G+ +AG+
Sbjct: 413 ARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELE 472
Query: 390 DAAKYVERVMNRGVEVPRFDYNKFLHYYSNE----EGVVMFEEVGKK 432
DA + ++G++ + YN +H + E +F E+ K
Sbjct: 473 DARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKN 519
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 156/353 (44%), Gaps = 22/353 (6%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
+++ FNR++ I K+++ ++M + D T I + +L + + +
Sbjct: 69 STVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSAL 128
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
+ G + +++ LC + EA +L K+ E +PN + YG LI G C V
Sbjct: 129 AKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKV 188
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G+ A ++ M +P++ V +I++ K + EA +F M K + + T
Sbjct: 189 GNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISP-NIVT 247
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI- 309
Y +I +CK + T++ EM I D TL++++ L G + EA+ VV+ +
Sbjct: 248 YNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMI 307
Query: 310 ---EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------- 359
+P++ Y+ L+ G A +VF M+ + C + +Y L+ G+
Sbjct: 308 HRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVD 367
Query: 360 -----LGKRGRKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
+ R+ P V ++T+ + GL G+ DA ++ RG ++P
Sbjct: 368 KAMYLFEEMSRQELTPNTVTYNTL-IHGLCHVGRLQDAISLFHEMVARG-QIP 418
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 146/328 (44%), Gaps = 40/328 (12%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
N + F+ ++D + K R + + EM + + N T+ + L ++ E K +
Sbjct: 209 NVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLM 268
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDV 190
+ M D + LN VV LC+ +V EA ++ + + ++PN + Y L+ G+C
Sbjct: 269 NEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLR 328
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM------------ 238
++ A K+++ M + ++ + +I + KI D+AM +F+ M
Sbjct: 329 NEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTY 388
Query: 239 --------RVKRMDDL--------------GLSTYRIVIDWMCKRGKISQAYTMLEEMFK 276
V R+ D L TYR + D++CK + +A +L+ +
Sbjct: 389 NTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEG 448
Query: 277 RGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRARE 332
+ D ++I+ G+ G L +A + + +P++ Y+ +I GL + E
Sbjct: 449 SNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAE 508
Query: 333 ATQVFREMIKRGCEPTMHTYIMLLQGHL 360
A+++F EM K GC P TY ++ +G L
Sbjct: 509 ASKLFSEMNKNGCSPNDCTYNLITRGFL 536
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 135/295 (45%), Gaps = 8/295 (2%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVR-ELKKMVNFFHIM 134
T N +VD + K + + + M R + + ALM +R E+ V F M
Sbjct: 282 TLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTM 341
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDL 193
C ++ N ++ C+ + V +A YL ++S + + PN + Y LI G C VG L
Sbjct: 342 VHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRL 401
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
+A +++ M G P + + + K D+AM + + + D + Y
Sbjct: 402 QDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDP-DIQIYTT 460
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK-- 311
++D MC+ G++ A + + +G++ + T + +I+GL +G L EA K+ E+ K
Sbjct: 461 ILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNG 520
Query: 312 --PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
P+ Y+ + +G LR A ++ EM+ RG + T +L+ G L G
Sbjct: 521 CSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLV-GMLSDDG 574
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 136/301 (45%), Gaps = 20/301 (6%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
+++TF+ ++D + K ID +M V N T+ + L + ++++
Sbjct: 180 DTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMI 239
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE------WIKPNEIAYGWLIK 185
M D G + + +V C+ V EA L+ ++ + P+++ + LI
Sbjct: 240 ESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIA 299
Query: 186 GYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD 245
G C G+ +AS ++ M + +P + +I+ K + + A + +M +
Sbjct: 300 GACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLM-----GN 354
Query: 246 LGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
LG+ TY ++ +CK G+I +A LEEM G D++T S++Y L R +
Sbjct: 355 LGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDD 414
Query: 302 AYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
A ++V E++ PD Y+ L+ GL + + +A V EM+ +G +P T+
Sbjct: 415 ALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFS 474
Query: 358 G 358
G
Sbjct: 475 G 475
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 167/379 (44%), Gaps = 28/379 (7%)
Query: 64 QKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVR 122
+ A+ A +T+N +++ + KS ++ E +E+ R D T+ + +L +
Sbjct: 27 EMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAG 86
Query: 123 ELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW---IKPNEIA 179
+L++ M+ GC ++ + ++ LC+ + EA+ LI +++ + PN I
Sbjct: 87 DLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIIT 146
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVV--DKMIETFFKINKDDEAMKVFQM 237
Y + G C EA ++ + D S D V +I+ K + DEA VF
Sbjct: 147 YNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDD 206
Query: 238 MRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
M + + TY +++ +CK K+ +A+ M+E M +G+ D +T S ++
Sbjct: 207 M-IAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKAS 265
Query: 298 RLREAYKVVEEIEK---------PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
R+ EA +++ + PD ++ LI G + +A+ +F EM+ + +P
Sbjct: 266 RVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPD 325
Query: 349 MHTYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVE 396
+ T+ L+ G L G G P V V GL K+G+ +A +++E
Sbjct: 326 VMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLE 385
Query: 397 RVMNRGVEVPRFDYNKFLH 415
+++ G Y ++
Sbjct: 386 EMVSSGCVPDSITYGSLVY 404
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 141/323 (43%), Gaps = 32/323 (9%)
Query: 111 FKIALMTLAEVRELKKMVNFF--HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK 168
+ I L +L + + + F + D G ++ N ++ LC+ + L +
Sbjct: 4 YNIVLQSLCRAGDTARALEIFRGEMARD-GVAPTIVTYNTIINGLCKSNDLGAGMELFEE 62
Query: 169 LSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINK 227
L E P+ + Y LI C GDL EA ++ M+ G P++ +I K+ +
Sbjct: 63 LVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGR 122
Query: 228 DDEAMKVFQMMRVKRMDDL-GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRG--IEADNL 284
DEA ++ Q M K D L + TY +D +CK+ ++A ++ + + D +
Sbjct: 123 IDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTV 182
Query: 285 TLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREM 340
T S++I GL G++ EA V +++ P++ Y+ L+ GL + + A + M
Sbjct: 183 TFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESM 242
Query: 341 IKRGCEPTMHTYIMLLQG---------------HLGKRGRKGPDPL----VNFDTIFVGG 381
+ +G P + TY +L+ + RG P+ L V F+ I + G
Sbjct: 243 VDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCT-PNVLVPDKVTFN-ILIAG 300
Query: 382 LVKAGKSLDAAKYVERVMNRGVE 404
KAG A+ E ++ + ++
Sbjct: 301 ACKAGNFEQASALFEEMVAKNLQ 323
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 104/233 (44%), Gaps = 10/233 (4%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRR-----LVNDK-TFKIALMTLAEVRELKKMV 128
IT++ +VD K+ +D E L M R LV DK TF I + + ++
Sbjct: 252 ITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQAS 311
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL--SEWIKPNEIAYGWLIKG 186
F M + + ++ LC+ V EA IL L + + PN + Y L+ G
Sbjct: 312 ALFEEMVAKNLQPDVMTFGALIDGLCKAGQV-EAARDILDLMGNLGVPPNVVTYNALVHG 370
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
C G + EA + M G P ++ + ++ D+A+++ ++ D
Sbjct: 371 LCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPD 430
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
+ TY I++D + K GK QA T+LEEM +G + D+ T ++ GL G L
Sbjct: 431 TV-TYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNL 482
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/237 (19%), Positives = 98/237 (41%), Gaps = 36/237 (15%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFF 131
+ +TFN ++ K+ N + +EM + L D TF + L + +++ +
Sbjct: 290 DKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDIL 349
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDV 190
+M + G ++ N +V LC+ + EA ++L +S P+ I YG L+ C
Sbjct: 350 DLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRA 409
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK--------- 241
+A ++ + + G++P + +++ +K K ++A+ V + M K
Sbjct: 410 SRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTF 469
Query: 242 --------RMDDLG-----------------LSTYRIVIDWMCKRGKISQAYTMLEE 273
R +L +T ++DW+C+ GK+ M++E
Sbjct: 470 AACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKE 526
>gi|410109873|gb|AFV61016.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
citrodora]
Length = 380
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 148/313 (47%), Gaps = 36/313 (11%)
Query: 104 RLVNDKTFKIALMTLAEVRE-------LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQR 156
RL + F + L T +V E K + F+ + +CG SL N +++ C+
Sbjct: 88 RLTREHKFWVPLDTCRKVLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMQRFCKE 147
Query: 157 KLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVV 215
+ A+ ++ +++W ++P+ +++ LI GY +GDL E ++ + M G +P +
Sbjct: 148 GDIRVAQLVLNAITKWGLRPSVVSFNTLINGYIRLGDLDEGFRLKSAMHASGVQPDVYTY 207
Query: 216 DKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMF 275
+I K +K D+A ++F M K M G+ T+ +ID CK G++ A + ++M
Sbjct: 208 SVLINGLCKESKMDDANELFDEMLDKGMVPNGV-TFTTLIDGHCKNGRVDLAMEIYKQML 266
Query: 276 KRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAR 331
+ + D +T +++IYGL +G L++A+ +++E+ KPD Y LI G +
Sbjct: 267 SQSLSPDLITYNTLIYGLCKKGELKQAHDLIDEMSMEGLKPDKITYTTLIDGCCKEGDME 326
Query: 332 EATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDA 391
A + + MI+ Y T + GL + G+S+DA
Sbjct: 327 TAFEHQKRMIQENIRLDDVVY-----------------------TALISGLCQEGRSVDA 363
Query: 392 AKYVERVMNRGVE 404
K + +++ G++
Sbjct: 364 EKMLREMLSVGLK 376
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 79/212 (37%), Gaps = 71/212 (33%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
N +TF ++D K+ +DL E ++M + L D
Sbjct: 238 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPD------------------------ 273
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVG 191
L N ++ LC++ + +A LI ++S E +KP++I Y LI G C G
Sbjct: 274 ----------LITYNTLIYGLCKKGELKQAHDLIDEMSMEGLKPDKITYTTLIDGCCKEG 323
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTY 251
D+ + FE ++ + I R+DD+ Y
Sbjct: 324 DM-----------ETAFEHQKRMIQENI----------------------RLDDV---VY 347
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADN 283
+I +C+ G+ A ML EM G++ +
Sbjct: 348 TALISGLCQEGRSVDAEKMLREMLSVGLKPNT 379
>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 687
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 134/298 (44%), Gaps = 55/298 (18%)
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCD 189
+++M +CG ++ N ++ + C++ +V EA L+ ++ PN++ Y L+ G
Sbjct: 190 YNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSH 249
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
G++ +A ++ M G E S+ D +I +
Sbjct: 250 SGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGY--------------------------- 282
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
C++G+I +A + EEM RG +T ++I+YGL GR+ +A K+++ +
Sbjct: 283 ---------CEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVM 333
Query: 310 EK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG- 364
PD+ Y+ LI G RL EA +F E+ R P++ TY L+ G L + G
Sbjct: 334 VNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDG-LCRLGD 392
Query: 365 ------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY 410
+ GPDP V T FV G K G A + + ++NRG++ RF Y
Sbjct: 393 LDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAY 450
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 151/309 (48%), Gaps = 10/309 (3%)
Query: 58 LFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALM 116
L FQ +A C + N +T+N +V+ + S ++ E +Q+M R L V+ T+ +
Sbjct: 224 LLFQ--MQAMGC-SPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIR 280
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKP 175
E ++++ M G ++ N ++ LC+ V +A+ L+ + +++ + P
Sbjct: 281 GYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMP 340
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
+ ++Y LI GY +G++ EA ++ + PS+ + +I+ ++ D AM++
Sbjct: 341 DLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLK 400
Query: 236 QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
M +K D + T+ + CK G + A + +EM RG++ D + I G L
Sbjct: 401 DEM-IKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELK 459
Query: 296 RGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
G +A+ + EE+ PD+ Y+ I GL +L +EA+++ ++M+ G P T
Sbjct: 460 LGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVT 519
Query: 352 YIMLLQGHL 360
Y ++ HL
Sbjct: 520 YTSIIHAHL 528
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 94/197 (47%), Gaps = 13/197 (6%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
L+ ++P+ AY I G +GD +A + M GF P + + I+ K+
Sbjct: 439 LNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNL 498
Query: 229 DEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNL 284
EA ++ VK+M GL TY +I G + +A + EM +GI +
Sbjct: 499 KEASEL-----VKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVV 553
Query: 285 TLSSIIYGLLARGRLREA----YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREM 340
T + +I+ RGRL+ A +++ E+ P++ Y+ LI GL ++R+ +A F EM
Sbjct: 554 TYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEM 613
Query: 341 IKRGCEPTMHTYIMLLQ 357
+G P +TY +L+
Sbjct: 614 QAKGISPNKYTYTILIN 630
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 6/169 (3%)
Query: 161 EAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMI 219
EA L+ K L + P+ + Y +I + G L +A ++ M +G PS+ +I
Sbjct: 500 EASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLI 559
Query: 220 ETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGI 279
++ + A+ F M K + + TY +I+ +CK K+ QAY EM +GI
Sbjct: 560 HSYAVRGRLKLAILHFFEMHEKGVHP-NVITYNALINGLCKVRKMDQAYNFFAEMQAKGI 618
Query: 280 EADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGL 324
+ T + +I G +EA ++ +++ +PD + L+K L
Sbjct: 619 SPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHL 667
>gi|302780731|ref|XP_002972140.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
gi|300160439|gb|EFJ27057.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
Length = 482
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 166/398 (41%), Gaps = 53/398 (13%)
Query: 78 NRMVDIIGKSRNIDLFWETLQEMGR-RRLVNDKTFKIALMTLAEVRELKKMVNFFHIMND 136
N +D + KS ID QE+ R LVN ++ I + + + + + + F M
Sbjct: 70 NITIDSLCKSDMIDKAESWFQELKDFRGLVNTVSYNILINAFCKTKRIDEAIQLFGEMKA 129
Query: 137 CGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGDLIE 195
GC S N ++ LC+ + + EA+ + LS + I Y L+ G+C + E
Sbjct: 130 PGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKADRVPE 189
Query: 196 ASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM----------------- 238
A ++ N + G + + +I+T FK K EA F M
Sbjct: 190 AVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTVLID 249
Query: 239 ------RVKRMDDLGLS------TYRIVI-----DWMCKRGKISQAYTMLEEMFKRGIEA 281
RV R ++ S + +VI D CK G + +A+ + E M RG
Sbjct: 250 GLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRGCTP 309
Query: 282 DNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVF 337
++++ + +I GL RL +A +V EE+ KPD+ Y + GL R R +A QV
Sbjct: 310 NDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQARQVL 369
Query: 338 REMIKRGCEPTMHTYIMLLQG--HLGK--RGRK---------GPDPLVNFDTIFVGGLVK 384
++ +G P + Y L+ G LG+ RK G P + V G
Sbjct: 370 CMLVDKGGTPDVVMYTALISGLCSLGRLDEARKVFEVDMRAAGCAPNNFTCNVLVNGFGL 429
Query: 385 AGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEG 422
AG+ +A + +R + RGV+ ++ + + EG
Sbjct: 430 AGRLDEARELFQRFVERGVQPDCRTFSAMANNTAKTEG 467
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 146/335 (43%), Gaps = 44/335 (13%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
N++++N +++ K++ ID + EM + T+ + L V L + F+
Sbjct: 100 NTVSYNILINAFCKTKRIDEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFY 159
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL---------------------- 169
+ G S N +V C+ V EA L+ +L
Sbjct: 160 ERLLSSGAGASFITYNILVDGFCKADRVPEAVELLNELVARGGVVTSAPYNCIIDTLFKK 219
Query: 170 --------------SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVV 215
+ ++P E+ + LI G C + A +I+ + G PS+ +
Sbjct: 220 GKIHEAELFFNRMEKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVIC 279
Query: 216 DKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMF 275
+++ F K DEA ++F++M + +S I+I+ +CK ++SQA + EE+
Sbjct: 280 SCLMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSC-NILINGLCKAKRLSQAREVFEEVV 338
Query: 276 KRGIEADNLTLSSIIYGLLARGRLREAYKV----VEEIEKPDISLYHGLIKGLLRLRRAR 331
KR + D +T S+ + GL R+ +A +V V++ PD+ +Y LI GL L R
Sbjct: 339 KRQAKPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSLGRLD 398
Query: 332 EATQVFR-EMIKRGCEPTMHTYIMLLQGHLGKRGR 365
EA +VF +M GC P T +L+ G G GR
Sbjct: 399 EARKVFEVDMRAAGCAPNNFTCNVLVNG-FGLAGR 432
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 90/236 (38%), Gaps = 58/236 (24%)
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C VG L EA ++++ + +G D+ ++ K + +E +KV ++M + R
Sbjct: 10 CHVGKLDEALELFHSLVSDGCGLPADL---LVRELSKAGRAEECLKVVKLM-LDRQQLRE 65
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
I ID +CK I +A + +E L++ +V
Sbjct: 66 RHLVNITIDSLCKSDMIDKAESWFQE-------------------------LKDFRGLVN 100
Query: 308 EIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKG 367
+ Y+ LI + +R EA Q+F EM GC P+ TY L
Sbjct: 101 TVS------YNILINAFCKTKRIDEAIQLFGEMKAPGCAPSTSTYNTL------------ 142
Query: 368 PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGV 423
+GGL + + +A ++ ER+++ G YN + + + V
Sbjct: 143 -----------IGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKADRV 187
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 100/445 (22%), Positives = 179/445 (40%), Gaps = 68/445 (15%)
Query: 39 HEFFLQICNNFPLSWRPVYLFFQYT----QKAQPCFA--HNSITFNRMVDIIGKSRNIDL 92
H+ L + ++F S+ LF + QP F +++ +N +++++ + + L
Sbjct: 105 HQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKL 164
Query: 93 FWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIMNDCGCE-----YSLEML 146
EMG R + D TF + L +++ V M+ G ++ M
Sbjct: 165 LESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQ 224
Query: 147 NKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDE 206
V + + L V+A+ L + S ++ LI GYC +G + +A +
Sbjct: 225 GFVEEGSIEAALRVKARMLEMGCS----ATKVTVNVLINGYCKLGRVEDALGYIQQEIAD 280
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQ 266
GFEP + + + + A+KV +M V+ D + TY IV++ +CK G++ +
Sbjct: 281 GFEPDQITYNTFVNGLCQNDHVGHALKVMDVM-VQEGHDPDVFTYNIVVNCLCKNGQLEE 339
Query: 267 AYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIK 322
A +L +M RG D T +++I L RL EA + ++ PD+ ++ LI
Sbjct: 340 AKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILIN 399
Query: 323 GLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG--HLGKRGRK-----------GPD 369
L ++ A ++F EM GC P TY L+ LGK G+ P
Sbjct: 400 ALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPR 459
Query: 370 PLVNFDTIFVG----------------------------------GLVKAGKSLDAAKYV 395
+ ++TI G GL K K DA +
Sbjct: 460 STITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLI 519
Query: 396 ERVMNRGVEVPRFDYNKFLHYYSNE 420
++++ G++ YN L +Y +
Sbjct: 520 NQMISEGLQPNNITYNSILTHYCKQ 544
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 157/359 (43%), Gaps = 22/359 (6%)
Query: 6 GHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQK 65
GH ++V ++ Q+ + P+ ++ + +C +C N L L +
Sbjct: 303 GHALKVMDVMVQEGHDPDVFTYNIVVNC-----------LCKNGQLEEAKGILNQMVDRG 351
Query: 66 AQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVREL 124
P + TFN ++ + ++ + +++ + + D TF I + L +V +
Sbjct: 352 CLP----DITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDP 407
Query: 125 KKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKP-NEIAYGWL 183
+ F M + GC N ++ LC + +A L+ + P + I Y +
Sbjct: 408 HLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTI 467
Query: 184 IKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM 243
I G C + EA ++++ M +G + + +I+ K K D+A + M + +
Sbjct: 468 IDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGL 527
Query: 244 DDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
+ TY ++ CK+G I +A +LE M G E D +T ++I GL GR + A
Sbjct: 528 QPNNI-TYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVAL 586
Query: 304 KVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
KV+ + +P Y+ +++ L R R+A +FREM + G P TY ++ +G
Sbjct: 587 KVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRG 645
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 99/443 (22%), Positives = 180/443 (40%), Gaps = 91/443 (20%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKT-FKIALMTLAE 120
Y++ + +TFN ++ + ++ + L+EM R + D+T F + E
Sbjct: 169 YSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVE 228
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIA 179
++ + M + GC + +N ++ C+ V +A Y+ ++++ +P++I
Sbjct: 229 EGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQIT 288
Query: 180 YGWLIKGYC----------------------DV-------------GDLIEASKIWNLMT 204
Y + G C DV G L EA I N M
Sbjct: 289 YNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMV 348
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK----------------------- 241
D G P I + +I N+ +EA+ + + + VK
Sbjct: 349 DRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPH 408
Query: 242 -------RMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
M + G + TY +ID +C GK+ +A +L++M G +T ++II
Sbjct: 409 LALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTII 468
Query: 291 YGLLARGRLREAYKVVEEIEKPDIS----LYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
GL + R+ EA +V ++++ IS ++ LI GL + ++ +A + +MI G +
Sbjct: 469 DGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQ 528
Query: 347 PTMHTYIMLLQGHLGKRG--RKGPDPL------------VNFDTIFVGGLVKAGKSLDAA 392
P TY +L H K+G +K D L V + T+ + GL KAG++ A
Sbjct: 529 PNNITYNSILT-HYCKQGDIKKAADILETMTANGFEVDVVTYGTL-INGLCKAGRTQVAL 586
Query: 393 KYVERVMNRGVEVPRFDYNKFLH 415
K + + +G+ YN L
Sbjct: 587 KVLRGMRIKGMRPTPKAYNPVLQ 609
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 130/292 (44%), Gaps = 8/292 (2%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIM 134
TFN +++ + K + L +EM D+ T+ + L + +L K ++ M
Sbjct: 393 TFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM 452
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDL 193
GC S N ++ LC++ + EA+ + ++ + I N I + LI G C +
Sbjct: 453 ESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKI 512
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
+A + N M EG +P+ + ++ + K +A + + M + + + TY
Sbjct: 513 DDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFE-VDVVTYGT 571
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI---- 309
+I+ +CK G+ A +L M +G+ + ++ L R +R+A + E+
Sbjct: 572 LINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVG 631
Query: 310 EKPDISLYHGLIKGLLRLRRA-REATQVFREMIKRGCEPTMHTYIMLLQGHL 360
E PD Y + +GL R +EA EM+ +G P ++ ML +G L
Sbjct: 632 EPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLL 683
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 80/183 (43%), Gaps = 30/183 (16%)
Query: 271 LEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLR 326
L+ +F GI+AD + + ++ L+ +++ V E+ KPD+ ++ L+K L R
Sbjct: 136 LQPLF--GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCR 193
Query: 327 LRRAREATQVFREMIKRGCEPTMHTYIMLLQG---------------HLGKRGRKGPDPL 371
+ R A + EM RG P T+ L+QG + + G
Sbjct: 194 AHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVT 253
Query: 372 VNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGK 431
VN + + G K G+ DA Y+++ + G E + YN F++ G+ + VG
Sbjct: 254 VN---VLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVN------GLCQNDHVGH 304
Query: 432 KLR 434
L+
Sbjct: 305 ALK 307
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 103/425 (24%), Positives = 171/425 (40%), Gaps = 81/425 (19%)
Query: 41 FFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEM 100
FFL+ C ++ FF ++ P + +S FN ++ + K ++ + +M
Sbjct: 38 FFLRHCKTGNVTATHALHFFHLMMRSTPTPSLSS--FNHLLSGLAKIKHYSQVFSLYNQM 95
Query: 101 GRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLV 159
L +D+ T I L L V L++ F + G ++ N ++K LC +
Sbjct: 96 RLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRI 155
Query: 160 VEAKYLILKLSEW------------------------------------------IKPNE 177
EA L L++ + KPN
Sbjct: 156 SEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNV 215
Query: 178 IAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQM 237
I Y ++ G C VG EA +++ M +G PSI + +I F K +E+ ++
Sbjct: 216 ITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLD- 274
Query: 238 MRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
M D GL T+ ++ID +CK GK+ +A +L M + GI D +T +S+I G
Sbjct: 275 ----EMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGF 330
Query: 294 LARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
G L A ++ + +PD+ Y+ LI G + + EA +++ EM+ G P +
Sbjct: 331 CMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNV 390
Query: 350 HTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFD 409
TY LL+G IF+ AGK DA K + G+ +
Sbjct: 391 ITYDSLLKG------------------IFL-----AGKVDDAKKLFSVMKAHGIAENSYT 427
Query: 410 YNKFL 414
Y FL
Sbjct: 428 YGIFL 432
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 153/329 (46%), Gaps = 46/329 (13%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRR----RLVNDKTFKIALMTLAEVRELKKMV 128
N IT+N +VD + K D + +EM + +++ + + E K+++
Sbjct: 214 NVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLL 273
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGY 187
+ M D G + + N ++ TLC+ V+EAK L+ + + I P+ + Y LI+G+
Sbjct: 274 DE---MLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGF 330
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV------- 240
C VGDL A +++ M +G EP + + +I + K K +EAMK++ M +
Sbjct: 331 CMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNV 390
Query: 241 -------------KRMDDL----------GLS----TYRIVIDWMCKRGKISQAYTMLEE 273
++DD G++ TY I +D +CK + +A + E
Sbjct: 391 ITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTE 450
Query: 274 MFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRR 329
+ + + L+ +I GL G+L A+++ E++ +P++ Y +I G R +
Sbjct: 451 LKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQ 510
Query: 330 AREATQVFREMIKRGCEPTMHTYIMLLQG 358
+A + ++M GC P + TY L++G
Sbjct: 511 VDKANVLIQKMEANGCTPDIITYNTLMRG 539
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 92/210 (43%), Gaps = 23/210 (10%)
Query: 230 EAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSI 289
A+ F +M ++ LS++ ++ + K SQ +++ +M G+ +D TL+ +
Sbjct: 52 HALHFFHLM-MRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNIL 110
Query: 290 IYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGC 345
+ L RLRE + I + P+I Y+ LIKGL R EAT++F M K GC
Sbjct: 111 LNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGC 170
Query: 346 EPTMHTYIMLLQGHLG------------------KRGRKGPDPLVNFDTIFVGGLVKAGK 387
P + TY L++G G R P V I V GL K G+
Sbjct: 171 TPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGR 230
Query: 388 SLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
+A + E + +G+ YN +H +
Sbjct: 231 EDEAKQLFEEMKTQGMIPSIISYNSLIHGF 260
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 72/146 (49%), Gaps = 1/146 (0%)
Query: 170 SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD 229
+ I N YG + G C L EA K++ + F+ I+ ++ +I+ K K +
Sbjct: 418 AHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLE 477
Query: 230 EAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSI 289
A ++F+ + + + TY I+I C+ G++ +A ++++M G D +T +++
Sbjct: 478 TAWELFEKLS-NEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTL 536
Query: 290 IYGLLARGRLREAYKVVEEIEKPDIS 315
+ G +L E +++ + + D+S
Sbjct: 537 MRGFYESNKLEEVVQLLHRMAQKDVS 562
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 97/213 (45%), Gaps = 8/213 (3%)
Query: 73 NSITFNRMVDII---GKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
N IT++ ++ I GK + + ++ G N T+ I L L + L + +
Sbjct: 389 NVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAE--NSYTYGIFLDGLCKNDCLFEAMK 446
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYC 188
F + + +E LN ++ LC+ + A L KLS E +PN + Y +I G+C
Sbjct: 447 LFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFC 506
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
G + +A+ + M G P I + ++ F++ NK +E +++ M K + +
Sbjct: 507 REGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAI 566
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEM-FKRGIE 280
T IV+D + K K + +L ++G++
Sbjct: 567 -TCSIVVDMLSKDEKYQECLHLLPRFPIQKGVD 598
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 156/327 (47%), Gaps = 14/327 (4%)
Query: 35 FNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFW 94
+NL + FL++ +N ++W LF + K+ C A ++ T+N ++D GKS I+ +
Sbjct: 793 YNLLIDGFLEV-HNVEVAWN---LFEE--MKSAGC-APDTFTYNSLIDAHGKSGKINELF 845
Query: 95 ETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTL 153
+ EM R N T+ + + L + L K ++ ++ + + ++ L
Sbjct: 846 DLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGL 905
Query: 154 CQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSI 212
+ + +A + + + +PN Y L+ GY +G + A + + M EG P +
Sbjct: 906 LKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDL 965
Query: 213 DVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLE 272
+++ + D+A+ F+ ++ +D L Y ++I+ + + + +A ++
Sbjct: 966 KSYTILVDILCIAGRVDDALHYFEKLKQAGLDP-DLVAYNLMINGLGRSQRTEEALSLFH 1024
Query: 273 EMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLR 328
EM RGI D T +S+I L G + EA K+ EE++ KP++ Y+ LI+G
Sbjct: 1025 EMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSG 1084
Query: 329 RAREATQVFREMIKRGCEPTMHTYIML 355
+ A ++++M+ GC+P T+ L
Sbjct: 1085 NSELAYGIYKKMMVGGCDPNTGTFAQL 1111
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 158/392 (40%), Gaps = 54/392 (13%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIM 134
TF+ ++ GK RNI L+EM L N T+ I + L ++ + M
Sbjct: 231 TFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRM 290
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDL 193
+D GC + ++ LC + + +A L K+ S KP+++ Y L+ + D G L
Sbjct: 291 DDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHL 350
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM--------------- 238
+ KIW M +G+ P + ++ K + +EA + M
Sbjct: 351 DKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTL 410
Query: 239 -----RVKRMDD----------LGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGI 279
R R+DD LG+ TY ++ID+ K G +A E+M RGI
Sbjct: 411 ISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGI 470
Query: 280 EADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQ 335
+ + ++ +Y L GRL EA + E++ PD Y+ ++K ++ + EA +
Sbjct: 471 APNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIK 530
Query: 336 VFREMIKRGCEPTMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGL 382
+ EM K CEP + I L L K GR P V I + GL
Sbjct: 531 LLSEMSKVQCEPDV-IVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGL 589
Query: 383 VKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
K G+ A + E + G +N L
Sbjct: 590 GKEGQIQKAVQLFESMNGHGCSPNTITFNTLL 621
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 104/439 (23%), Positives = 181/439 (41%), Gaps = 67/439 (15%)
Query: 55 PVYLFFQYTQKAQ-PCFAHNSITFNRMVDIIGKSRNID---LFWETLQEMGRRRLVND-- 108
P++ F + + P H + T N M++I+ R ++ ++ +Q RR V+
Sbjct: 104 PIHALFYFKSVGELPNVVHTTETCNHMLEILRVHRRVEDMAFVFDLMQRQIIRRNVDTYL 163
Query: 109 ---------KTFKIALMTLAEVRELKKMVNFF------HIMNDCG-CEYSLEMLNKVVKT 152
+ A L ++RE ++N + H + G C+ +LE+ ++V
Sbjct: 164 IIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSE 223
Query: 153 LCQRKL-------VVEAKYLILKL---------SEWIKPNEIAYGWLIKGYCDVGDLIEA 196
+ L V K +K S ++PN Y I+ G + EA
Sbjct: 224 GLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEA 283
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK--RMDDLGLSTYRIV 254
+I M D+G P + +I+ K D+AM +F M+ + D + TY +
Sbjct: 284 YRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKV---TYVTL 340
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK--- 311
+D G + + + EM G D +T + ++ L GR+ EA+ +++ + K
Sbjct: 341 LDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGV 400
Query: 312 -PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDP 370
P++ Y+ LI GLLR R +A +F M G EPT +TYI+L+ H GK G G
Sbjct: 401 LPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYH-GKSGHPG-KA 458
Query: 371 LVNFDTIFVGGLVKAGKSLDAAKYVERVMNR--------------GVEVPRFDYNKFLHY 416
L F+ + G+ + +A+ Y M R G+ YN +
Sbjct: 459 LETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKC 518
Query: 417 YSN----EEGVVMFEEVGK 431
YS +E + + E+ K
Sbjct: 519 YSKVGQVDEAIKLLSEMSK 537
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 99/424 (23%), Positives = 172/424 (40%), Gaps = 77/424 (18%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N+ITFN ++D + K+ +DL + +M D TF + + ++K + F
Sbjct: 613 NTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLF 672
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQ------RKLVVEAKYLILK----------------- 168
H M ++L TLC + +E + I +
Sbjct: 673 HQMK--------KLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWED 724
Query: 169 -----LSEWIKPNEIAYGW----------------LIKGYCDVGDLIEASKIWNLMTDE- 206
L+E I +G +IK C A ++ T E
Sbjct: 725 VMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKEL 784
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQ 266
G +P++ V + +I+ F +++ + A +F+ M+ TY +ID K GKI++
Sbjct: 785 GVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTF-TYNSLIDAHGKSGKINE 843
Query: 267 AYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA----YKVVEEIEKPDISLYHGLIK 322
+ + +EM RG + + +T + +I L+ RL +A Y +V P + LI
Sbjct: 844 LFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLID 903
Query: 323 GLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG-------------RKGPD 369
GLL+ R +A ++F M+ GC P Y +L+ G+ GK G ++G
Sbjct: 904 GLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGY-GKLGHVDTACEFFKRMVKEGIR 962
Query: 370 PLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYS----NEEGVVM 425
P + TI V L AG+ DA Y E++ G++ YN ++ EE + +
Sbjct: 963 PDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSL 1022
Query: 426 FEEV 429
F E+
Sbjct: 1023 FHEM 1026
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 152/342 (44%), Gaps = 51/342 (14%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRR-LVNDKTFKIALMTLAE 120
+T+ +A + +TF +V+ + K+ I+ ++ L M ++ L N T+ + L
Sbjct: 357 WTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLR 416
Query: 121 VRELKKMVNFFHIMNDCGCE---YSLEML------------------------------- 146
L ++ F M G E Y+ +L
Sbjct: 417 ANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVA 476
Query: 147 -NKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
N + +L + + EAK + +L S + P+ + Y ++K Y VG + EA K+ + M+
Sbjct: 477 CNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMS 536
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCK 260
EP + V++ +I+T +K + +EA ++F RM+++ L+ TY I++ + K
Sbjct: 537 KVQCEPDVIVINSLIDTLYKAGRVEEAWQMFC-----RMEEMNLAPTVVTYNILLAGLGK 591
Query: 261 RGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR----LREAYKVVEEIEKPDISL 316
G+I +A + E M G + +T ++++ L L+ YK+ +PD+
Sbjct: 592 EGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLT 651
Query: 317 YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
++ +I G ++ + + A +F +M K+ P T LL G
Sbjct: 652 FNTIIHGFIKQNQIKNAIWLFHQM-KKLLRPDHVTLCTLLPG 692
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 151/367 (41%), Gaps = 61/367 (16%)
Query: 54 RPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFK 112
R V++ F +P +N ++D + N+++ W +EM D T+
Sbjct: 774 RNVFVKFTKELGVKPTLK----VYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYN 829
Query: 113 IALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SE 171
+ + ++ ++ + + M GC+ + N V+ L + + +A L L S
Sbjct: 830 SLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSG 889
Query: 172 WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEA 231
P +G LI G G L +A ++++ M G P+ + + ++ + K+ D A
Sbjct: 890 DFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTA 949
Query: 232 MKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
+ F+ M VK L +Y I++D +C G++ A E++ + G++
Sbjct: 950 CEFFKRM-VKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLD----------- 997
Query: 292 GLLARGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
PD+ Y+ +I GL R +R EA +F EM RG P ++T
Sbjct: 998 --------------------PDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYT 1037
Query: 352 YIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
Y L+ +LG VG + +AGK + +++ G++ F YN
Sbjct: 1038 YNSLIL-NLG----------------IVGMIEEAGKIYEELQFI------GLKPNVFTYN 1074
Query: 412 KFLHYYS 418
+ Y+
Sbjct: 1075 ALIRGYT 1081
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/394 (20%), Positives = 153/394 (38%), Gaps = 72/394 (18%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALMTLAEVRELKKMV 128
A +T+N ++ +GK I + + M G N TF L L + E+ +
Sbjct: 575 LAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLAL 634
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYC 188
F+ M C + N ++ ++ + A +L ++ + ++P+ + L+ G
Sbjct: 635 KMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKLLRPDHVTLCTLLPGVI 694
Query: 189 DVGDLIEASKI----------------W-----NLMTDEGFEPSI--------------- 212
G + +A +I W ++T+ G E +I
Sbjct: 695 KSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAILFGERLVCRAICKDD 754
Query: 213 DVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG----LSTYRIVIDWMCKRGKISQAY 268
V+ +I+ K K A VF VK +LG L Y ++ID + + A+
Sbjct: 755 SVLIPIIKVLCKHKKTSVARNVF----VKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAW 810
Query: 269 TMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGL 324
+ EEM G D T +S+I G++ E + + +E+ KP+ Y+ +I L
Sbjct: 811 NLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNL 870
Query: 325 LRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVK 384
++ R +A ++ ++ PT T+ GP + GL+K
Sbjct: 871 VKSNRLDKAMDLYYNLVSGDFSPTPCTF--------------GP---------LIDGLLK 907
Query: 385 AGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYS 418
+G+ DA + + +++ G YN ++ Y
Sbjct: 908 SGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYG 941
>gi|225437663|ref|XP_002279193.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Vitis vinifera]
Length = 526
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 140/305 (45%), Gaps = 46/305 (15%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRR--RLVNDKTFKIALM 116
FF YT K + F H + + M+ I+G+SR D WE L +M R+ L++ ++ ++ L
Sbjct: 112 FFNYTNKRKG-FYHTPFSLDTMLYILGRSRRFDQIWELLVDMRRKDQSLISPRSVQVVLG 170
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPN 176
+A+V +K+ V F E+ N +++TLCQ K + +A+ + L +P+
Sbjct: 171 RIAKVCSVKQTVESFRKFKKLVPEFDTACFNALLRTLCQEKSMRDARNVYHSLKHDFRPD 230
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
+ L+ G+ EA ++ M + G EP DVV
Sbjct: 231 LRTFNILLSGWKSAE---EAEGFFDEMREMGVEP--DVV--------------------- 264
Query: 237 MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR 296
+Y +ID CK +I +AY ++++M I D ++ +SII GL
Sbjct: 265 -------------SYNCLIDVYCKGREIERAYKVIDKMRDEQISPDVISYTSIIGGLGLV 311
Query: 297 GRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
G+ +A V++E+++ PD++ Y+ I+ R +A + EM+ +G P TY
Sbjct: 312 GQPDKARDVLKEMKEYGCYPDVAAYNAAIRNFCIANRLGDADGLMDEMVGKGLSPNATTY 371
Query: 353 IMLLQ 357
+ +
Sbjct: 372 NLFFR 376
>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
Length = 716
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 160/365 (43%), Gaps = 41/365 (11%)
Query: 96 TLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIMNDCG-----CEYSLEMLNKV 149
+EM R ++ D T + + +L + ++K+ + F M G Y + MLN
Sbjct: 315 VFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKI-MLNGY 373
Query: 150 VKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFE 209
C LV L L + I P+ + LIK Y + G L +A I+N M D G +
Sbjct: 374 ATKGC---LVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVK 430
Query: 210 PSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKIS 265
P + +I +I K D+AM+ F +M D G++ Y +I C G +
Sbjct: 431 PDVVTYTTVIAALCRIGKMDDAMEKFN-----QMIDQGVAPDKYAYHCLIQGFCTHGSLL 485
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV----VEEIEKPDISLYHGLI 321
+A ++ E+ G+ D + SSII L GR+ +A + V + PD +Y L+
Sbjct: 486 KAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLM 545
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR-------------KGP 368
G + + +A +VF M+ G EP + Y L+ G+ K GR KG
Sbjct: 546 DGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYC-KIGRIDEGLSLFREMLQKGI 604
Query: 369 DPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH-YYSN---EEGVV 424
P I + GL AG+++ A + G+ + + YN L ++ N +E +
Sbjct: 605 KPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIF 664
Query: 425 MFEEV 429
+F+E+
Sbjct: 665 LFKEL 669
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 128/261 (49%), Gaps = 9/261 (3%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T+ I + + + FF + G + + N ++K C+ K EA ++L
Sbjct: 117 TYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHR 176
Query: 170 SEWIK--PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVV--DKMIETFFKI 225
+ + P+ +Y L+K CD G +A + +M + G S DVV +I+ FFK
Sbjct: 177 TPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKE 236
Query: 226 NKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
++A +F+ M V+R L TY V+ +CK + +A L +M +G+ DN T
Sbjct: 237 GDVNKACDLFKEM-VQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWT 295
Query: 286 LSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMI 341
+++IYG + G+ +EA +V +E+ + PD+ + L+ L + + +EA VF M
Sbjct: 296 YNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMA 355
Query: 342 KRGCEPTMHTYIMLLQGHLGK 362
+G P + +Y ++L G+ K
Sbjct: 356 MKGQNPDVFSYKIMLNGYATK 376
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 134/286 (46%), Gaps = 13/286 (4%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALM----TLAEVRELKKMVNF 130
+T+ ++ + + +D E +M + + DK L+ T + + K+++
Sbjct: 434 VTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELI-- 491
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCD 189
IMN+ G + + ++ LC+ +++A+ + L ++ P+ + Y L+ GYC
Sbjct: 492 LEIMNN-GMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCL 550
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
VG + +A ++++ M G EP++ V ++ + KI + DE + +F+ M K + +
Sbjct: 551 VGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTI- 609
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
Y I+ID + G+ A EM + GI + T + ++ G EA + +E+
Sbjct: 610 LYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKEL 669
Query: 310 E----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
K DI + +I G+ + RR EA +F + + G P + T
Sbjct: 670 RAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVT 715
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 92/231 (39%), Gaps = 64/231 (27%)
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG----LSTYRIVIDWMCKRG 262
G I + + +++ F + + DEA+ + + R +LG + +Y I++ +C +G
Sbjct: 145 GLRVDIIIANHLLKGFCEAKRTDEALDIL----LHRTPELGCVPDVFSYSILLKSLCDQG 200
Query: 263 KISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISLYHGLIK 322
K QA +L M + G + PD+ Y +I
Sbjct: 201 KSGQADDLLRMMAEGG-----------------------------AVCSPDVVAYTTVID 231
Query: 323 GLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGL 382
+ +A +F+EM++RG P + TY + V L
Sbjct: 232 CFFKEGDVNKACDLFKEMVQRGIPPDLVTY-----------------------SSVVHAL 268
Query: 383 VKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN----EEGVVMFEEV 429
KA A ++ +++N+GV + YN ++ YS+ +E V +F+E+
Sbjct: 269 CKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEM 319
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 162/346 (46%), Gaps = 19/346 (5%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKT-FKIALMTLAEVRELKKMVNFFHI 133
++F+ ++ + + +D L+EM LV D + + + + +
Sbjct: 297 VSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDE 356
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M CGC + N ++ LC+ + +++A+ L+ ++ E + P+ + LI GYC G
Sbjct: 357 MVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGK 416
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
L +A ++++ M ++ P I + +I+ + D+A ++ M + + + TY
Sbjct: 417 LDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHV-TYS 475
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
I+ID C++G++ A+ L+EM +GI + +T +SII G G + + K ++++
Sbjct: 476 ILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVN 535
Query: 311 --KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH--------- 359
PD+ Y+ LI G ++ + +A ++ M K +P + TY ML+ G
Sbjct: 536 KVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEA 595
Query: 360 ---LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
K KG +P + G V AG S +A + + ++ RG
Sbjct: 596 GWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 641
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 90/401 (22%), Positives = 169/401 (42%), Gaps = 52/401 (12%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N+ T N MV K+ D + EM +R + D T + + + + +
Sbjct: 155 NTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALV 214
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDV 190
M G + + N V+K LC+ + +A + ++ ++ + P+ ++ LI G+C V
Sbjct: 215 DSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRV 274
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR----------- 239
G++ EA KI+ M G +P + +I F + K D AM + MR
Sbjct: 275 GEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIY 334
Query: 240 ----------------VKRMDDL-------GLSTYRIVIDWMCKRGKISQAYTMLEEMFK 276
++ D++ + TY +++ +CK ++ A +L EM +
Sbjct: 335 TMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRE 394
Query: 277 RGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRARE 332
RG+ D T +++I+G G+L +A ++ + + +PDI Y+ LI G+ R +
Sbjct: 395 RGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDK 454
Query: 333 ATQVFREMIKRGCEPTMHTYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVG 380
A ++ +M R P TY +L+ H L + KG P + +
Sbjct: 455 ANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIK 514
Query: 381 GLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEE 421
G ++G K+++++M V YN +H Y E+
Sbjct: 515 GYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKED 555
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 129/279 (46%), Gaps = 7/279 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+T+N +++ + K R + L EM R + D TF + +L K + F
Sbjct: 367 VTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDT 426
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGD 192
M + + N ++ +C++ + +A L + S I PN + Y LI +C+ G
Sbjct: 427 MLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQ 486
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ +A + M ++G P+I + +I+ + + + K Q M V ++ L TY
Sbjct: 487 VEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSP-DLITYN 545
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
+I K K+ A+ +L M K ++ D +T + +I G G ++EA + E++
Sbjct: 546 TLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAK 605
Query: 311 --KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
+PD Y +I G + ++EA Q+ EM++RG P
Sbjct: 606 GIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAP 644
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 121/262 (46%), Gaps = 23/262 (8%)
Query: 196 ASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVI 255
A+ + L+ E + ++ M+ + K + D+ V M KR + T+ +++
Sbjct: 140 AADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEME-KRCVFPDVVTHNVMV 198
Query: 256 DWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----K 311
D + G A +++ M +G++ +T +S++ GL G +A++V +E++
Sbjct: 199 DARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVA 258
Query: 312 PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKG---- 367
PD+ + LI G R+ EA ++++EM RG +P + ++ L+ G +RG+
Sbjct: 259 PDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLI-GLFARRGKMDHAMA 317
Query: 368 -----------PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHY 416
PD ++ T+ +GG +AG DA + + ++ G YN L+
Sbjct: 318 YLREMRCFGLVPDGVIY--TMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNG 375
Query: 417 YSNEEGVVMFEEVGKKLREVGL 438
E ++ E + ++RE G+
Sbjct: 376 LCKERRLLDAEGLLNEMRERGV 397
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 97/211 (45%), Gaps = 3/211 (1%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHI 133
+T+N ++D + + ++D + +M R + N T+ I + + E +++ F
Sbjct: 437 VTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDE 496
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDVGD 192
M + G ++ N ++K C+ V + K+L + + P+ I Y LI GY
Sbjct: 497 MINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDK 556
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ +A K+ N+M E +P + + +I F EA +F+ M K ++ TY
Sbjct: 557 MHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEP-DRYTYM 615
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADN 283
+I+ G +A+ + +EM +RG D+
Sbjct: 616 SMINGHVTAGNSKEAFQLHDEMLQRGFAPDD 646
>gi|326522248|dbj|BAK07586.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 548
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 132/277 (47%), Gaps = 8/277 (2%)
Query: 88 RNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEML 146
R++D + L EM +V D T+ L +LK F + G + M
Sbjct: 219 RDLDAALKVLDEMPGWGIVPDVVTYTTVLSAYCAKEDLKGAQKLFDDIIAGGRVPDVTMY 278
Query: 147 NKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
++ C+ + +A ++ ++ + ++PNE+ Y +I+ C G EA + M
Sbjct: 279 TVLIDGYCRTGKIQDAARIMDEMEAAGVQPNEVTYSVVIEACCKEGKSAEACNLMREMLG 338
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKIS 265
G P + K+++ + K +EA ++++ M VK+ + +I W+CK G +
Sbjct: 339 AGHTPDTPLAAKVVDVMCQDGKAEEAHQMWRWM-VKKNVPPDNTITNTLIYWLCKSGMVR 397
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV----VEEIEKPDISLYHGLI 321
+A + +E+ ++G + LT +S+I GL G L+EA KV VE +P+ Y LI
Sbjct: 398 EARKLFDEL-EKGYKPSLLTYNSLISGLCENGELQEAGKVWDDMVERRYEPNAMTYEALI 456
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
KG ++ + E VF EM+ +GC P+ Y +L+
Sbjct: 457 KGFCKIGKPDEGAAVFTEMVTKGCAPSKVLYQVLVDS 493
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 120/251 (47%), Gaps = 7/251 (2%)
Query: 113 IALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW 172
I L L VR+L + M G + V+ C ++ + A+ L +
Sbjct: 210 ILLKGLVGVRDLDAALKVLDEMPGWGIVPDVVTYTTVLSAYCAKEDLKGAQKLFDDIIAG 269
Query: 173 IK-PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEA 231
+ P+ Y LI GYC G + +A++I + M G +P+ +IE K K EA
Sbjct: 270 GRVPDVTMYTVLIDGYCRTGKIQDAARIMDEMEAAGVQPNEVTYSVVIEACCKEGKSAEA 329
Query: 232 MKVF-QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
+ +M+ D L+ V+D MC+ GK +A+ M M K+ + DN +++I
Sbjct: 330 CNLMREMLGAGHTPDTPLAAK--VVDVMCQDGKAEEAHQMWRWMVKKNVPPDNTITNTLI 387
Query: 291 YGLLARGRLREAYKVVEEIE---KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
Y L G +REA K+ +E+E KP + Y+ LI GL +EA +V+ +M++R EP
Sbjct: 388 YWLCKSGMVREARKLFDELEKGYKPSLLTYNSLISGLCENGELQEAGKVWDDMVERRYEP 447
Query: 348 TMHTYIMLLQG 358
TY L++G
Sbjct: 448 NAMTYEALIKG 458
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 82/185 (44%), Gaps = 15/185 (8%)
Query: 79 RMVDII---GKSRNIDLFWETLQEMGRRRLVNDKTFKIALM----TLAEVRELKKMVNFF 131
++VD++ GK+ W + M ++ + D T L+ VRE +K+ +
Sbjct: 350 KVVDVMCQDGKAEEAHQMW---RWMVKKNVPPDNTITNTLIYWLCKSGMVREARKLFDEL 406
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDV 190
+ G + SL N ++ LC+ + EA + + E +PN + Y LIKG+C +
Sbjct: 407 ----EKGYKPSLLTYNSLISGLCENGELQEAGKVWDDMVERRYEPNAMTYEALIKGFCKI 462
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G E + ++ M +G PS + ++++ + DD + Q + D L +
Sbjct: 463 GKPDEGAAVFTEMVTKGCAPSKVLYQVLVDSLSEPIHDDIVDNIVQTAALSGRDFLDGDS 522
Query: 251 YRIVI 255
+ I I
Sbjct: 523 WEIFI 527
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 12/121 (9%)
Query: 312 PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPD-- 369
PD+ + L+KGL+ +R A +V EM G P + TY +L + K KG
Sbjct: 203 PDLVSCNILLKGLVGVRDLDAALKVLDEMPGWGIVPDVVTYTTVLSAYCAKEDLKGAQKL 262
Query: 370 ----------PLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN 419
P V T+ + G + GK DAA+ ++ + GV+ Y+ +
Sbjct: 263 FDDIIAGGRVPDVTMYTVLIDGYCRTGKIQDAARIMDEMEAAGVQPNEVTYSVVIEACCK 322
Query: 420 E 420
E
Sbjct: 323 E 323
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 125/292 (42%), Gaps = 9/292 (3%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFF 131
+ +TFN +V + + +D +++M D T+ + L + +
Sbjct: 495 DEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELL 554
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
+ CGC+ + N ++K LC +A+ L+ + P+E+ + +I C
Sbjct: 555 SDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQK 614
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G L +A + +M + G P+ +++ K K A+++ M D L T
Sbjct: 615 GLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNGTPD---LIT 671
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y VI + K GK+ +A +L M G+ D T S+ YG+ A +++ ++
Sbjct: 672 YNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQ 731
Query: 311 ----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
PD + Y+ ++ G R RR A F M+ GC P TY++LL+
Sbjct: 732 DTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEA 783
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/414 (20%), Positives = 178/414 (42%), Gaps = 30/414 (7%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
+++T+ ++ + S E L EM D+ TF + +L + + + +
Sbjct: 355 DAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVV 414
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDV 190
M++ GC + + ++ LC V +A L+ +L + KP+ IAY ++KG C
Sbjct: 415 DHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCST 474
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS- 249
A ++ M P + ++ + + D A++V V++M + G S
Sbjct: 475 EQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRV-----VEQMSENGCSP 529
Query: 250 ---TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
TY +ID +C I A +L ++ G + D +T ++++ GL R +A +++
Sbjct: 530 DIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLM 589
Query: 307 EEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
+ + PD ++ +I L + +A + + M + GC P TY +++ L K
Sbjct: 590 ANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALL-K 648
Query: 363 RGR------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY 410
G+ G L+ ++T+ + L KAGK +A + +++ G+ Y
Sbjct: 649 AGKAQAALELLSGMTNGTPDLITYNTV-ISNLTKAGKMEEALDLLRVMVSNGLCPDTTTY 707
Query: 411 NKFLHYYSNEEGVVMFEEVGKKLREVGLADLADIFQRYGKKMATRERRRNRAIE 464
+ E+G + +++++ GL+ + R+RR + AI+
Sbjct: 708 RSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFC-RDRRTDLAID 760
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/295 (20%), Positives = 134/295 (45%), Gaps = 11/295 (3%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHI 133
+T++ ++D K L EM + D T+ + + + ++ + +N
Sbjct: 287 VTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSN 346
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGD 192
+ GC+ V+K+LC + E + L+ ++ S P+E+ + ++ C G
Sbjct: 347 LPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGL 406
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV--KRMDDLGLST 250
+ A ++ + M++ G I +++ + + D+A+++ ++ + D +
Sbjct: 407 VDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIA--- 463
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y V+ +C + +A ++ EM D +T ++++ L +G + A +VVE++
Sbjct: 464 YTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMS 523
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG 361
+ PDI Y+ +I GL +A ++ ++ GC+P + T+ LL+G G
Sbjct: 524 ENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCG 578
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/377 (21%), Positives = 159/377 (42%), Gaps = 49/377 (12%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAE-VREL---KKMVNF 130
+T+N MV+ ++ I+ RRL+N F T +R L ++ +
Sbjct: 220 VTYNTMVNGYCRAGRIE---------DARRLINGMPFPPDTFTFNPLIRALCVRGRIPDA 270
Query: 131 FHIMNDC---GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKG 186
+ +D GC S+ + ++ C+ +A L+ ++ ++ +P+ + Y LI
Sbjct: 271 LAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINA 330
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM--D 244
C+ GD+ EA I + + G +P ++++ + E ++ M D
Sbjct: 331 MCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPD 390
Query: 245 DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK 304
++ T+ ++ +C++G + +A +++ M + G AD +T SSI+ GL GR+ +A +
Sbjct: 391 EV---TFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVE 447
Query: 305 VVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL 360
++ ++ KPD Y ++KGL + A ++ EM+ C P
Sbjct: 448 LLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDE----------- 496
Query: 361 GKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE 420
V F+T+ V L + G A + VE++ G YN + NE
Sbjct: 497 -----------VTFNTV-VASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNE 544
Query: 421 EGVVMFEEVGKKLREVG 437
+ E+ L+ G
Sbjct: 545 SCIDDAMELLSDLQSCG 561
>gi|242069901|ref|XP_002450227.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
gi|241936070|gb|EES09215.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
Length = 894
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 138/295 (46%), Gaps = 9/295 (3%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHI 133
+T+ ++ +G+ ++ L EM R L N + + + L + R + + +
Sbjct: 347 VTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQ 406
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDVGD 192
M + + N ++ C+ V EA K L + ++PN+++Y LI G+C G+
Sbjct: 407 MVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGE 466
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR-MDDLGLSTY 251
++ AS + M G P + + +I + DEA+ V + M ++ M D + Y
Sbjct: 467 VMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANI--Y 524
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK 311
++I +CK+ +S A +L EM ++ ++ D +++I G + +L +A K+ E +E+
Sbjct: 525 NVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEE 584
Query: 312 P----DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
DI Y+ +IKG + EA M K GC P TY L+ G+ K
Sbjct: 585 KGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKK 639
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 124/299 (41%), Gaps = 22/299 (7%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLIEA 196
GC N ++ C+R V L+ ++ + I P + YG +I DL +
Sbjct: 306 GCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKI 365
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVID 256
+ M + G P++ + + +I K +A+ V M R D + T+ +I
Sbjct: 366 ESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDP-DVVTFNTLIA 424
Query: 257 WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKP 312
C+ G + +A +L E +R +E + L+ + +I+G RG + A ++ E+ P
Sbjct: 425 AFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTP 484
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR--------- 363
D+ LI GL+ + EA V +M +R P + Y +L+ G KR
Sbjct: 485 DVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLL 544
Query: 364 -----GRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
+ PD V T + G +++ K DA K E + +G YN + Y
Sbjct: 545 VEMLEQKVQPDKFVY--TTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGY 601
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 91/206 (44%), Gaps = 21/206 (10%)
Query: 163 KYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETF 222
++L + KPN + Y LI GYC++G+ A ++ M EG P++ +I +
Sbjct: 647 RFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSL 706
Query: 223 FKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWM-CKRGKISQAYTMLEEMFKRGIEA 281
FK +K +A F+ M + + + +V C+ G I+ + ++ K+
Sbjct: 707 FKKDKAIQAAAYFEHMLLNHCSPNDATMHYLVNGLTNCRYGMINSNCSDTDQAHKKS--- 763
Query: 282 DNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMI 341
L + GL++ G P IS Y+ +I L R +A ++ +M
Sbjct: 764 ---ALLDVFKGLISDGL------------DPRISAYNAIIFSLCRHNMLGKAMELKEKMS 808
Query: 342 KRGCEPTMHTYIMLLQG--HLGKRGR 365
+GC P T++ LL G +GK G+
Sbjct: 809 NKGCLPDPVTFLSLLYGFSSVGKSGK 834
>gi|225459754|ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Vitis vinifera]
Length = 531
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 133/292 (45%), Gaps = 43/292 (14%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMT 117
FF + + F H+ + M+D+ GK R DL W+ + M R + + +TF I +
Sbjct: 132 FFNWATNLEE-FGHSPEPYMEMIDLAGKVRQFDLAWQLIDLMKTRNVEIPVETFTILVRR 190
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNE 177
+ + V+ F+ M D GC+ + V+ +L +++ +EA+ L + +P+
Sbjct: 191 YVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKDRFEPDV 250
Query: 178 IAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQM 237
+ Y L+ G+C G++ EA +++ M G +P++
Sbjct: 251 VVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNV------------------------- 285
Query: 238 MRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
TY IVID +C+ G+I++A+ + EM G + + +T ++++ + G
Sbjct: 286 -----------YTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAG 334
Query: 298 RLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGC 345
R + +V ++++ PD Y+ LI+ R EA ++ +K+GC
Sbjct: 335 RTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNS-VKKGC 385
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 88/208 (42%), Gaps = 3/208 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N+ITFN ++ + K+ + + +M R D T+ + + L++ V
Sbjct: 319 NAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKIL 378
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDV 190
+ + GC + N + + + V A + K+ + +PN + Y L++ + D
Sbjct: 379 NSVKK-GCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADK 437
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
K+ M + EP+ + +I TF I + A F+ M ++ L
Sbjct: 438 KSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPV 497
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRG 278
Y +V+ + K G++ + ++E+M RG
Sbjct: 498 YEMVLQQLRKAGQLKKHEELVEKMVNRG 525
>gi|334187687|ref|NP_197005.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635761|sp|Q9LFQ4.2|PP383_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g15010, mitochondrial; Flags: Precursor
gi|332004721|gb|AED92104.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 572
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 95/433 (21%), Positives = 171/433 (39%), Gaps = 85/433 (19%)
Query: 21 SPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRM 80
S L + L C+ ++E ++I + W + FF + K Q + + ++ M
Sbjct: 109 SDRKELRNKLEECDVKPSNELVVEILSRVRNDWETAFTFFVWAGKQQG-YVRSVREYHSM 167
Query: 81 VDIIGKSRNIDLFWETLQEMGR--RRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCG 138
+ I+GK R D W + EM + LVN +T I + V ++ K +N FH
Sbjct: 168 ISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFK 227
Query: 139 CEYSLEMLNKVVKTLCQRKLVVEAKYLI---------------LKLSEW----------- 172
E ++ ++ LC+ K V +A +LI + L+ W
Sbjct: 228 LEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPREAE 287
Query: 173 ----------IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETF 222
+K + ++Y +I Y G L + K+++ M E EP V + ++
Sbjct: 288 RVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHAL 347
Query: 223 FKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEAD 282
K + EA + + M ++ + + TY +I +CK K +A + +EM ++G+
Sbjct: 348 AKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGL--- 404
Query: 283 NLTLSSIIYGLLARGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIK 342
P I YH ++ LR E ++ +M K
Sbjct: 405 ----------------------------FPTIRTYHAFMR---ILRTGEEVFELLAKMRK 433
Query: 343 RGCEPTMHTYIMLLQGHLGKRG------------RKGPDPLVNFDTIFVGGLVKAGKSLD 390
GCEPT+ TYIML++ R K P ++ + + GL GK +
Sbjct: 434 MGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEE 493
Query: 391 AAKYVERVMNRGV 403
A Y + + ++G+
Sbjct: 494 AYGYYKEMKDKGM 506
>gi|356535173|ref|XP_003536123.1| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
mitochondrial-like [Glycine max]
Length = 509
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 145/351 (41%), Gaps = 19/351 (5%)
Query: 29 SLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSR 88
+LS + T LQ N P + R V F Q+ + P F+H T + VD G+ +
Sbjct: 90 NLSFSHITPTPNLILQTLNLSPQAGRTVLGFHQWLS-SNPQFSHTDDTLSYFVDYFGRRK 148
Query: 89 NIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMN-DCGCEYSLEMLN 147
+ + L KT A+ L + V FF M D G + + L
Sbjct: 149 DFKATHDVLAAASP--AAGPKTLASAIDRLVRAGRSSQAVQFFERMERDYGLKRDRDSLK 206
Query: 148 KVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEG 207
VV+ LC A+ ++ L+ P+E LI+G+C G L EA ++ M G
Sbjct: 207 VVVEKLCSEGFASYAEKMVKDLAREFFPDEATCDMLIRGWCIDGKLDEAQRLAGEMYRGG 266
Query: 208 FEPSIDVVDKMIETFFKINKD-------DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCK 260
F+ + + M++ K+ ++ EA KV M + + T+ ++I +CK
Sbjct: 267 FDLGVGAYNAMLDCVCKLCREKDPFQLHSEAEKVLVEMEYRGVPR-NTETFNVLITNLCK 325
Query: 261 RGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP------DI 314
K A +L M + G + T +I L RL E ++++ + D
Sbjct: 326 IRKTEDALGLLHSMGEWGCYPNETTFLVLIRSLYQAARLEEGDEMIDRMRSAGFGEFLDK 385
Query: 315 SLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
Y+ +K L + R A VF M GCEP + TY +L+ G LG R
Sbjct: 386 KAYYQFLKILCGIERVDHALSVFAMMKDDGCEPGVITYDLLM-GKLGAHNR 435
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 79/174 (45%), Gaps = 15/174 (8%)
Query: 76 TFNRMVDIIGK-SRNIDLFW------ETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKM 127
+N M+D + K R D F + L EM R + N +TF + + L ++R+ +
Sbjct: 273 AYNAMLDCVCKLCREKDPFQLHSEAEKVLVEMEYRGVPRNTETFNVLITNLCKIRKTEDA 332
Query: 128 VNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-----SEWIKPNEIAYGW 182
+ H M + GC + ++++L Q + E +I ++ E++ ++ AY
Sbjct: 333 LGLLHSMGEWGCYPNETTFLVLIRSLYQAARLEEGDEMIDRMRSAGFGEFL--DKKAYYQ 390
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
+K C + + A ++ +M D+G EP + D ++ N+ D+ +F
Sbjct: 391 FLKILCGIERVDHALSVFAMMKDDGCEPGVITYDLLMGKLGAHNRIDKVNALFN 444
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 139/279 (49%), Gaps = 7/279 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHI 133
+T+N +++ + K + + E EM R + D TF + ++ + K V F +
Sbjct: 308 VTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEM 367
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGD 192
M + + N ++ C+ + + L + S I PN I+YG LI GYC++G
Sbjct: 368 MIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGC 427
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ EA ++W+ M ++GFE +I + +++ + + +A + M +K + G+ TY
Sbjct: 428 VSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGI-TYN 486
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA----YKVVEE 308
+I+ K + +A+ ++ +M G+ D +T + I+ G +GR++EA K++E
Sbjct: 487 TLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIER 546
Query: 309 IEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
PD S Y LI G + +EA +V EM++RG P
Sbjct: 547 GVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVP 585
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 87/419 (20%), Positives = 170/419 (40%), Gaps = 87/419 (20%)
Query: 90 IDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNK 148
+DL WE QE+ R + VN T I + L + ++++ +F M + G + N
Sbjct: 78 VDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNT 137
Query: 149 VVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVG---------------- 191
++ C++ L+ EA L+ +S + +KP Y +I G C G
Sbjct: 138 LINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIG 197
Query: 192 -------------------DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
++++A +I++ M +G P + +I K D+A+
Sbjct: 198 MSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQAL 257
Query: 233 KVFQMMR---------------------------VKRMDD-------LGLSTYRIVIDWM 258
K F+ M+ +K D+ L + TY +++ +
Sbjct: 258 KYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGL 317
Query: 259 CKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDI 314
CK +S+A + EM +RG+ D T +++I G G + +A + E + KPD+
Sbjct: 318 CKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDV 377
Query: 315 SLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG------------K 362
Y+ LI G + + +++ +MI R P +Y +L+ G+ +
Sbjct: 378 VTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDE 437
Query: 363 RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEE 421
KG + + V G +AG ++ A +++ ++ +G+ YN ++ + EE
Sbjct: 438 MVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEE 496
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 140/306 (45%), Gaps = 35/306 (11%)
Query: 154 CQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSID 213
C+ V+++K L + ++ A L+ G VG + A +I+ + G + ++
Sbjct: 47 CEAFRVLKSKGLCVSIN--------ACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVY 98
Query: 214 VVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL----STYRIVIDWMCKRGKISQAYT 269
++ MI K N+ E K F + M++ G+ TY +I+ C++G + +A+
Sbjct: 99 TLNIMINALCK-NQKIENTKSF----LSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFE 153
Query: 270 MLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLL 325
+++ M +G++ T ++II GL G+ A V++E+ K PD + Y+ L+
Sbjct: 154 LMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECC 213
Query: 326 RLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG-------------RKGPDPLV 372
R +A ++F EM +G P + ++ L+ G L K G G P
Sbjct: 214 RNDNMMDAERIFDEMPSQGVVPDLVSFSALI-GLLSKNGCLDQALKYFRDMKNAGLAPDN 272
Query: 373 NFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKK 432
TI +GG + G +A K + ++ +G + YN L+ E+ + +E+ +
Sbjct: 273 VIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTE 332
Query: 433 LREVGL 438
+ E G+
Sbjct: 333 MTERGV 338
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 99/211 (46%), Gaps = 3/211 (1%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHI 133
+T+N ++D K ++ E +M RR+ N ++ I + + + + +
Sbjct: 378 VTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDE 437
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDVGD 192
M + G E ++ N +VK C+ V+A ++L L + I P+ I Y LI G+ +
Sbjct: 438 MVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEEN 497
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ A + N M + G P + + ++ F + + EA ++ + ++R + STY
Sbjct: 498 MDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEA-ELIMLKMIERGVNPDRSTYT 556
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADN 283
+I+ + + +A+ + +EM +RG D+
Sbjct: 557 SLINGHVTQNNLKEAFRVHDEMLQRGFVPDD 587
>gi|225464138|ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
[Vitis vinifera]
gi|296087974|emb|CBI35257.3| unnamed protein product [Vitis vinifera]
Length = 503
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 145/320 (45%), Gaps = 24/320 (7%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
+ K++ L +LK + F+ M + G S+ LN ++K LC+ ++A I
Sbjct: 119 SQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAALRI 178
Query: 167 LK--LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFK 224
+ + P+ YG LI G C +G + EA +++ M + P++ +I +
Sbjct: 179 FREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKELFKEMETKACSPTVVTYTSLIHGLCQ 238
Query: 225 INKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNL 284
D A+++ + M K + + TY ++D CK G S+A +L+ M R + +
Sbjct: 239 SKDLDSAIRLLEEMASKGIKP-NVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMI 297
Query: 285 TLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREM 340
T S++++GL G+L+EA ++++ ++ +PD LY +I G + + EA EM
Sbjct: 298 TYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEM 357
Query: 341 IKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMN 400
+ G P T+ + ++ H I V GL + Y+ +
Sbjct: 358 VLGGISPNRLTWSLHVRIH----------------NIVVQGLCTEHPNRAFQLYLS-MRT 400
Query: 401 RGVEVPRFDYNKFLHYYSNE 420
RG+ + ++ ++Y+ N+
Sbjct: 401 RGISIDAKTFDSLVNYFCNK 420
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 102/240 (42%), Gaps = 12/240 (5%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LK 168
T+ + L + ++L + M G + ++ + ++ C+ A L+ +
Sbjct: 228 TYTSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMM 287
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
+S PN I Y L+ G C G L EA +I + M +G P + K+I F I K
Sbjct: 288 VSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKF 347
Query: 229 DEAMKVFQMMRVKRMD------DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEAD 282
EA M + + L + + IV+ +C ++A+ + M RGI D
Sbjct: 348 HEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLCTEHP-NRAFQLYLSMRTRGISID 406
Query: 283 NLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFR 338
T S++ +G L +A +V+E+ PD ++ ++ R+ RE+ ++ +
Sbjct: 407 AKTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEVTWNAVVCAFWDRRKVRESAELVQ 466
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 116/272 (42%), Gaps = 21/272 (7%)
Query: 196 ASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVI 255
A ++ M +E + D+ + + +++K +A++VF+ M+ + +Y V
Sbjct: 69 AEELLCRMKEEKCNITEDIFLSICRAYGRVHKPLDAVRVFRKMKEYECEP-SQKSYITVF 127
Query: 256 DWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR-GRLREAYKVVEEIEK--- 311
+ ++ A M + GI +L+ +I L G + A ++ E+
Sbjct: 128 AILVGENQLKLALRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNRGC 187
Query: 312 -PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG------------ 358
PD Y LI GL RL + EA ++F+EM + C PT+ TY L+ G
Sbjct: 188 PPDSYTYGTLINGLCRLGKIGEAKELFKEMETKACSPTVVTYTSLIHGLCQSKDLDSAIR 247
Query: 359 HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYS 418
L + KG P V + + G K+G S A + ++ +++R Y+ +H
Sbjct: 248 LLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLC 307
Query: 419 NEEGVVMFEEVGKKLREVGLADLADIFQRYGK 450
E + E+ +++ GL A + YGK
Sbjct: 308 KEGKLQEAVEILDRMKLQGLRPDAGL---YGK 336
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/248 (19%), Positives = 117/248 (47%), Gaps = 23/248 (9%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALM--------TLAEVRELKK 126
+T+ ++ + +S+++D L+EM + + + +LM + + L
Sbjct: 227 VTYTSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDM 286
Query: 127 MVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIK 185
MV+ H+ N + + +V LC+ + EA ++ ++ + ++P+ YG +I
Sbjct: 287 MVSRRHLPN-------MITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIIS 339
Query: 186 GYCDVGDLIEASKIWNLMTDEGFEP-----SIDV-VDKMIETFFKINKDDEAMKVFQMMR 239
G+CD+ EA+ + M G P S+ V + ++ + A +++ MR
Sbjct: 340 GFCDICKFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLCTEHPNRAFQLYLSMR 399
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
+ + + T+ ++++ C +G + +A +++EM G D +T ++++ R ++
Sbjct: 400 TRGIS-IDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEVTWNAVVCAFWDRRKV 458
Query: 300 REAYKVVE 307
RE+ ++V+
Sbjct: 459 RESAELVQ 466
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 141/318 (44%), Gaps = 31/318 (9%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMV 128
A N ITFN +++ + K + E L M R D T++ ++ +L
Sbjct: 495 LAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTAT 554
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGY 187
+ + M G S+EM N + K + + ++S + PN + YG LI G+
Sbjct: 555 HLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGW 614
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ-MMRVKRMDDL 246
C G+L EA ++ M + G P++ + ++ F+K K DEA V Q ++ + +
Sbjct: 615 CKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGC 674
Query: 247 GLST------------------------YRIVIDWMCKRGKISQAYTMLEEMFKRGIEAD 282
+ST + ++I +CK G+I+ A ++ E + + D
Sbjct: 675 SISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPD 734
Query: 283 NLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFR 338
N T SS+I+G A G + EA+ + + + P+I Y+ LI GL + + A +F
Sbjct: 735 NFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFN 794
Query: 339 EMIKRGCEPTMHTYIMLL 356
++ +G P TY L+
Sbjct: 795 KLQSKGISPNGITYNTLI 812
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 168/394 (42%), Gaps = 56/394 (14%)
Query: 97 LQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSL----EMLNKVV-- 150
L E+ R + +F + L A+ +L +N F M GC SL +LNK+V
Sbjct: 137 LAEVYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQS 196
Query: 151 -----------------------------KTLCQRKLVVEAKYLILKLSEW-IKPNEIAY 180
K C+ V +A + ++ ++ N +AY
Sbjct: 197 GDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAY 256
Query: 181 GWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
++ YC +G +A +I + +G P++ +++ + K + +EA +V + M
Sbjct: 257 HAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEM-- 314
Query: 241 KRMDDLGLS--TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR 298
K D+ + Y ++I+ C+RG++ A + EM GI + +++I GL GR
Sbjct: 315 KETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGR 374
Query: 299 LREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIM 354
+ E KV++E+E +PD Y+ LI G R R+A ++ R M++ G T TY
Sbjct: 375 MEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNT 434
Query: 355 LLQGHLGKRG------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
LL+G ++G P + + GL KAGK+ A + + RG
Sbjct: 435 LLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARG 494
Query: 403 VEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREV 436
+ +N ++ + EE+ +++E+
Sbjct: 495 LAKNVITFNTVINGLCKIGRMAEAEELLDRMKEL 528
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 162/361 (44%), Gaps = 27/361 (7%)
Query: 111 FKIALMTLAEVRE--LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK 168
F +A+M A R+ + + V F M G E +L + V+ C +A+ ++
Sbjct: 219 FTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILES 278
Query: 169 LS-EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVV--DKMIETFFKI 225
L + + PN + Y L+KGYC G + EA ++ M + G + +D V MI + +
Sbjct: 279 LQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETG-DIVVDEVAYGMMINGYCQR 337
Query: 226 NKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
+ D+A +V MR + + L Y +I+ +CK G++ + +L+EM G+ D +
Sbjct: 338 GRMDDATRVRNEMRDAGI-HVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYS 396
Query: 286 LSSIIYGLLARGRLREAYKVVEEIEKPDIS----LYHGLIKGLLRLRRAREATQVFREMI 341
+++I G G +R+A+++ + + ++ Y+ L+KG L +A +++ M+
Sbjct: 397 YNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLML 456
Query: 342 KRGCEPTMHTYIMLLQGHLGKRG--------------RKGPDPLVNFDTIFVGGLVKAGK 387
KRG P + LL G L K G R ++ F+T+ + GL K G+
Sbjct: 457 KRGVAPNEISCSTLLDG-LFKAGKTEQALNLWKETLARGLAKNVITFNTV-INGLCKIGR 514
Query: 388 SLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLADIFQR 447
+A + ++R+ Y Y + + K+ +G A ++F
Sbjct: 515 MAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNS 574
Query: 448 Y 448
+
Sbjct: 575 F 575
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 146/310 (47%), Gaps = 24/310 (7%)
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M D G +L + N ++ LC+ + E + ++ ++ + ++P++ +Y LI GYC G
Sbjct: 350 MRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGS 409
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM--RVKRMDDLGLST 250
+ +A ++ +M G + + +++ F ++ D+A++++ +M R +++ ST
Sbjct: 410 MRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCST 469
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
++D + K GK QA + +E RG+ + +T +++I GL GR+ EA ++++ ++
Sbjct: 470 ---LLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMK 526
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL------ 360
+ PD Y L G +L + AT + +M G P++ + + GH
Sbjct: 527 ELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWH 586
Query: 361 ------GKRGRKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
+ +G P LV + + + G K G +A ++N G+ F +
Sbjct: 587 KVNDIHSEMSARGLSPNLVTYGAL-IAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSAL 645
Query: 414 LHYYSNEEGV 423
+ + E V
Sbjct: 646 MSCFYKEGKV 655
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 127/284 (44%), Gaps = 24/284 (8%)
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
+ +++ L++ + D G L A +++ M G PS+ ++++ + A V+
Sbjct: 147 SAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVY 206
Query: 236 QMMRVKRM--DDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
MR+ + D+ T I+ C+ G+++QA +EEM G+E + + +++
Sbjct: 207 GQMRIAGVLPDEF---TVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCY 263
Query: 294 LARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
G +A +++E +++ P++ Y L+KG + R EA +V +EM + G
Sbjct: 264 CGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVD 323
Query: 350 H-TYIMLLQGHLGKRGRKGPDPLVNFD-------------TIFVGGLVKAGKSLDAAKYV 395
Y M++ G+ +RGR V + + GL K G+ + K +
Sbjct: 324 EVAYGMMINGYC-QRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVL 382
Query: 396 ERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLA 439
+ + + G+ ++ YN + Y E + E+ + + GLA
Sbjct: 383 QEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLA 426
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 86/201 (42%), Gaps = 25/201 (12%)
Query: 85 GKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLE 144
G+ + +E+L+ +R L ++ T+ + A + + + +M G ++
Sbjct: 714 GRIADAKSLFESLRN--KRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNII 771
Query: 145 MLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLM 203
N ++ LC+ + A L KL S+ I PN I Y LI YC G EA K+ M
Sbjct: 772 TYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKM 831
Query: 204 TDEGF-EPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRG 262
+EG+ E +I ++D+MIE N D + TY +I K G
Sbjct: 832 VEEGYMEEAIKLLDQMIEN----NVDPNYI-----------------TYCTLIHGYIKSG 870
Query: 263 KISQAYTMLEEMFKRGIEADN 283
+ + + +EM RG+ N
Sbjct: 871 NMEEISKLYDEMHIRGLLPTN 891
>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
Length = 698
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 139/294 (47%), Gaps = 8/294 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHI 133
+T+ ++ +G+ ++ L EM R L N + + + L + R + + +
Sbjct: 152 VTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQ 211
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDVGD 192
M + N ++ C+ V EA K L + ++PN+++Y LI G+C G+
Sbjct: 212 MVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGE 271
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR-MDDLGLSTY 251
+ AS + M G P + + +I + ++A+ V + M ++ M D + Y
Sbjct: 272 AMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDANI--Y 329
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK 311
++I +CK+ +S A +LEEM ++ ++ D +++I G + +L +A K+ E +E+
Sbjct: 330 NVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEE 389
Query: 312 ---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
PDI Y+ +IKG + +EA M K GC P TY L+ G+ K
Sbjct: 390 KACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKK 443
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 118/278 (42%), Gaps = 22/278 (7%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEA 196
GC N ++ C+R + L+ ++ ++ I P + YG +I GDL +
Sbjct: 111 GCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKV 170
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVID 256
+ M G P++ + + +I K +A + M VK + + T+ +I
Sbjct: 171 ESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQM-VKSRFNPDVVTFNTMIA 229
Query: 257 WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKP 312
C+ G + +A +L E +RG+E + L+ + +I+G RG A ++ E+ P
Sbjct: 230 GFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTP 289
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR--------- 363
D+ LI GL+ + +A V +M +R P + Y +L+ G KR
Sbjct: 290 DMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLL 349
Query: 364 -----GRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVE 396
+ PD + T + G V++ K DA K E
Sbjct: 350 EEMLEQKVQPDKFIY--TTLIDGFVRSDKLSDARKIFE 385
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 81/175 (46%), Gaps = 27/175 (15%)
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
G Y ++ID C+RG I + +L EM +GI +T +II+ L +G L + ++
Sbjct: 115 GAVFYNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLL 174
Query: 307 EEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
E+ P++ +Y+ +I L + R A +A+ + +M+K
Sbjct: 175 GEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKS------------------- 215
Query: 363 RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
R PD +V F+T+ + G + G +A K + + RG+E + Y +H +
Sbjct: 216 --RFNPD-VVTFNTM-IAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGF 266
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 81/186 (43%), Gaps = 19/186 (10%)
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
KPN Y LI GYC++GD A ++ M EG P++ +I + FK +K +A
Sbjct: 462 KPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAA 521
Query: 234 VFQMMRVKRMDDLGLSTYRIVIDWM-CKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
F+ M + + + +V + C+ G ++ + ++ ++ L + G
Sbjct: 522 YFEHMLLNHCPPNDATVHYLVNGLVNCRHGMVNSNRSDTKQAHEKS------ALLDVFRG 575
Query: 293 LLARGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
L++ G P IS Y+ +I L R +A + +M +GC P T+
Sbjct: 576 LISDGL------------DPRISAYNAIIFSLCRHNMLGKAMDLKDKMSNKGCLPDPITF 623
Query: 353 IMLLQG 358
+ LL G
Sbjct: 624 LSLLYG 629
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 139/302 (46%), Gaps = 40/302 (13%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAE 120
+ +Q FA ++ +N +VD + KS +D +E L+EM + + T+ + LA+
Sbjct: 583 FQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAK 642
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAY 180
+ L + F EAK S+ I+ N I Y
Sbjct: 643 IDRLDEAYMLFE----------------------------EAK------SKGIELNVILY 668
Query: 181 GWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
LI G+ VG + EA I M +G P++ + +++ K + DEA+ FQ M+
Sbjct: 669 SSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKE 728
Query: 241 KRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
+ TY I+I+ +C+ K ++A+ +EM K+G+ + +T +++I GL G +
Sbjct: 729 MKCSP-NTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNIT 787
Query: 301 EAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
+AY + E + PD + ++ LI+G+ R EA QVF E RGC + T I LL
Sbjct: 788 DAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLL 847
Query: 357 QG 358
Sbjct: 848 DA 849
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 100/439 (22%), Positives = 185/439 (42%), Gaps = 59/439 (13%)
Query: 69 CFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKM 127
C + + +N +D GK+ ++D+ W+ E+ L +D ++ + L + L +
Sbjct: 241 CLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEA 300
Query: 128 VNFFHIMN---DCGCEYS--------------------LEML------------NKVVKT 152
F M D C Y+ LE L N ++
Sbjct: 301 EELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTC 360
Query: 153 LCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSI 212
L +++ V EA L + + KPN Y +I C G + EA KI + M G P++
Sbjct: 361 LGKKRKVDEALTLFDVMKKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNL 420
Query: 213 DVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLE 272
V+ M++ K N+ +EA ++F+ +R + TY +ID + K+GKI AY + E
Sbjct: 421 LSVNIMVDRLCKANQLEEAHRIFESAS-ERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFE 479
Query: 273 EMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLR 328
+M G +A+ + +S+I GR + +K+ +E+ +PD++L + + + +
Sbjct: 480 KMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAG 539
Query: 329 RAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG-------------RKGPDPLVNFD 375
+ +F +M G P + +Y +L+ G L K G ++G
Sbjct: 540 EVEKGRAIFEDMKSFGFLPDVRSYSILIHG-LTKAGQARETSNIFQAMSQQGFALDARAY 598
Query: 376 TIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN----EEGVVMFEEVGK 431
V GL K+GK A + +E + + V Y + + +E ++FEE
Sbjct: 599 NAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKS 658
Query: 432 KLREVGLADLADIFQRYGK 450
K E+ + + + +GK
Sbjct: 659 KGIELNVILYSSLIDGFGK 677
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 119/298 (39%), Gaps = 67/298 (22%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+ +Y LI G G E S I+ M+ +GF + +++ K K D+A +V
Sbjct: 558 PDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEV 617
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
+ M+VK + ++TY ++D + K ++ +AY + EE +GIE + + SS+I G
Sbjct: 618 LEEMKVKHVHPT-VATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFG 676
Query: 295 ARGRLREAYKVVEEIEK---------------------------------------PDIS 315
GR+ EAY ++EE+ K P+
Sbjct: 677 KVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTY 736
Query: 316 LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFD 375
Y LI GL R+++ +A ++EM K+G P + TY
Sbjct: 737 TYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTY----------------------- 773
Query: 376 TIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE----EGVVMFEEV 429
T + GL K G DA ER G +N + SN E +FEE
Sbjct: 774 TTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEET 831
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 133/297 (44%), Gaps = 43/297 (14%)
Query: 109 KTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQR-------KLVVE 161
+ + + LAE R+ ++ + M D G E S+ + +V+ L + LV E
Sbjct: 177 SAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDE 236
Query: 162 AKYLILKL-----------------------------SEWIKPNEIAYGWLIKGYCDVGD 192
K L+ + ++P++++Y ++ C G
Sbjct: 237 VKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGR 296
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
L EA +++ M E P + MI + + D+A K+ + +R +R + ++
Sbjct: 297 LGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLR-ERGCIPSVVSFN 355
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK- 311
++ + K+ K+ +A T+ + M K+ + + T + II L GR+ EAYK+ +E+E
Sbjct: 356 SILTCLGKKRKVDEALTLFDVM-KKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELA 414
Query: 312 ---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
P++ + ++ L + + EA ++F +RGC P TY L+ G LGK+G+
Sbjct: 415 GLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDG-LGKKGK 470
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 159/334 (47%), Gaps = 50/334 (14%)
Query: 75 ITFNRMVDIIGKSRNID---LFWETLQEMGRRRLVNDKT-FKIALMTLAEVRELKKMVNF 130
+ F+ M+ + +S N+D +++ +++E G L+ D + I + + + +N
Sbjct: 366 VCFSSMMSLFTRSGNLDKALMYFNSVKEAG---LIPDNVIYTILIQGYCRKGMISEAMNL 422
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCD 189
+ M GC + N ++ LC+RK++ EA L +++E + P+ LI G+C
Sbjct: 423 RNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCK 482
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
+G+L A +++ M ++ + + + +++ F K+ D A +++ M K + +S
Sbjct: 483 LGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPIS 542
Query: 250 TYRIVIDWMCKRGKISQAYTM-----------------------------------LEEM 274
+ I+++ +C +G +S+A+ + LE+M
Sbjct: 543 -FSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKM 601
Query: 275 FKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK------PDISLYHGLIKGLLRLR 328
G D ++ +++IYG + + +A+ +V+++E+ PD+ Y+ ++ G R
Sbjct: 602 ISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCREN 661
Query: 329 RAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
+ +EA V R+MI+RG P TY L+ G + +
Sbjct: 662 QMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQ 695
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 95/452 (21%), Positives = 180/452 (39%), Gaps = 68/452 (15%)
Query: 51 LSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDII---GKSRNIDLFWETLQEMGRRRLVN 107
L+WR Y + ++ N T N MV+ + GK + F +QE G +
Sbjct: 208 LAWRI------YQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDI- 260
Query: 108 DKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLIL 167
T+ + + +++ H M G + N V+ LC+ AK +
Sbjct: 261 -VTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFA 319
Query: 168 K-LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKIN 226
+ L + P+ Y L+ C GD +E I++ M P + M+ F +
Sbjct: 320 EMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSG 379
Query: 227 KDDEAMKVFQMMRVKRM--DDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNL 284
D+A+ F ++ + D++ Y I+I C++G IS+A + EM ++G D +
Sbjct: 380 NLDKALMYFNSVKEAGLIPDNV---IYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVV 436
Query: 285 TLSSIIYGLLARGRLREAYKVVEEIE---------------------------------- 310
T ++I++GL R L EA K+ E+
Sbjct: 437 TYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKM 496
Query: 311 -----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL-----QGHL 360
K D+ Y+ L+ G ++ A +++ +M+ + PT ++ +L+ +GHL
Sbjct: 497 KEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHL 556
Query: 361 GKRGR-------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
+ R K P V + G ++G + D ++E++++ G YN
Sbjct: 557 SEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTL 616
Query: 414 LHYYSNEEGVVMFEEVGKKLREVGLADLADIF 445
++ + EE + + KK+ E + D+F
Sbjct: 617 IYGFVKEENMSKAFGLVKKMEEKQGGLVPDVF 648
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 158/349 (45%), Gaps = 30/349 (8%)
Query: 97 LQEMGRRRLVNDKTFKIALMTL-AEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQ 155
+M R +V D ++M+L L K + +F+ + + G + +++ C+
Sbjct: 353 FSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCR 412
Query: 156 RKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDV 214
+ ++ EA L + L + + + Y ++ G C L EA K++N MT+ G P
Sbjct: 413 KGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYT 472
Query: 215 VDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEM 274
+ +I+ K+ AM++F+ M+ KR+ L + TY ++D K G I A + +M
Sbjct: 473 LTILIDGHCKLGNLQNAMELFKKMKEKRIK-LDVVTYNTLLDGFGKVGDIDTAKEIWADM 531
Query: 275 FKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRA 330
+ I ++ S ++ L ++G L EA++V +E+ KP + + + +IKG R A
Sbjct: 532 VSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNA 591
Query: 331 REATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLD 390
+ +MI G P +Y L+ G + + N F GLVK
Sbjct: 592 SDGEIFLEKMISEGFVPDCISYNTLIYGFVKEE---------NMSKAF--GLVK------ 634
Query: 391 AAKYVERVMNRGVEVPR-FDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
K E+ +G VP F YN LH + E + E V +K+ E G+
Sbjct: 635 --KMEEK---QGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGV 678
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 100/187 (53%), Gaps = 9/187 (4%)
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
N+ + LI+ + L EA + + L+ +G+ SID + +I + +I + A +++
Sbjct: 154 NDSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIY 213
Query: 236 QMMRVKRMDDLGLSTY--RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
Q + R +G++ Y I+++ +CK GK+ + T L E+ ++G+ D +T +++I
Sbjct: 214 Q--EISR-SGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAY 270
Query: 294 LARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
++G + EA++++ + P + Y+ +I GL + + A +VF EM++ G P
Sbjct: 271 SSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDS 330
Query: 350 HTYIMLL 356
TY LL
Sbjct: 331 TTYRSLL 337
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 136/290 (46%), Gaps = 12/290 (4%)
Query: 67 QPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELK 125
Q C A + +T+N ++ + K + + + EM R L D T I + ++ L+
Sbjct: 429 QGC-AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQ 487
Query: 126 KMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLI 184
+ F M + + + N ++ + + AK + + S+ I P I++ L+
Sbjct: 488 NAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILV 547
Query: 185 KGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI-NKDDEAMKVFQMMRVKRM 243
C G L EA ++W+ M + +P++ + + MI+ + + N D + + +M+ +
Sbjct: 548 NALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFV 607
Query: 244 DDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKR--GIEADNLTLSSIIYGLLARGRLRE 301
D +Y +I K +S+A+ ++++M ++ G+ D T +SI++G +++E
Sbjct: 608 PDC--ISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKE 665
Query: 302 A----YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
A K++E PD S Y LI G + EA + EM++RG P
Sbjct: 666 AEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSP 715
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 100/213 (46%), Gaps = 5/213 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+T+N ++D GK +ID E +M + ++ +F I + L L + +
Sbjct: 506 VTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDE 565
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGD 192
M + ++ + N ++K C+ + + + K+ SE P+ I+Y LI G+ +
Sbjct: 566 MISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEEN 625
Query: 193 LIEASKIWNLMTDE--GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
+ +A + M ++ G P + + ++ F + N+ EA V + M ++R + ST
Sbjct: 626 MSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKM-IERGVNPDRST 684
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADN 283
Y +I+ + +++A+ +EM +RG D+
Sbjct: 685 YTSLINGFVSQDNLTEAFRFHDEMLQRGFSPDD 717
>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 100/419 (23%), Positives = 179/419 (42%), Gaps = 72/419 (17%)
Query: 52 SWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTF 111
S P+ L F + F H +TF M+ + +D LQ+M + +
Sbjct: 54 SCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDL 113
Query: 112 KIALMTL-AEVRELKKMVNFFHIMNDCGCEYSLEMLNKV--------------------- 149
I+++++ +V ++ V F+ + + GC+ S+++ N V
Sbjct: 114 FISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMK 173
Query: 150 --------------VKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLI 194
+K LC+ V AK L++++S + P+ ++Y +I C+VG +
Sbjct: 174 RDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVK 233
Query: 195 EASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----T 250
E ++ E FEP + V + +I + K+ + F++MR M + G+S +
Sbjct: 234 EGREL-----AERFEPVVSVYNALIN---GLCKEHDYKGAFELMR--EMVEKGISPNVIS 283
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y +I+ +C G+I A++ L +M KRG + TLSS++ G RG +A + ++
Sbjct: 284 YSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMI 343
Query: 311 K-----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
+ P++ Y+ L++G +A VF M + GC P + TY L+ G KRG
Sbjct: 344 RGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLING-FAKRGS 402
Query: 366 -------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVM--NRGVEVPRFD 409
G P V T V L + K +A +E + N VP F+
Sbjct: 403 LDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFN 461
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 156/343 (45%), Gaps = 21/343 (6%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHIM 134
+N +++ + K + +E ++EM + + N ++ + L +++ +F M
Sbjct: 248 VYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQM 307
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW--IKPNEIAYGWLIKGYCDVGD 192
GC ++ L+ +VK R +A L ++ ++PN +AY L++G+C G+
Sbjct: 308 LKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGN 367
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+++A +++ M + G P+I +I F K D A+ ++ M + Y
Sbjct: 368 IVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCP-NVVVYT 426
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK- 311
+++ +C+ K +A +++E M K T ++ I GL GRL A KV ++E+
Sbjct: 427 NMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQ 486
Query: 312 ----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH-------- 359
P+I Y+ L+ GL + R EA + RE+ RG E + TY LL G
Sbjct: 487 HRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGI 546
Query: 360 ----LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERV 398
+GK G P + + K GK+ AA+ ++ V
Sbjct: 547 ALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLV 589
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 164/387 (42%), Gaps = 36/387 (9%)
Query: 58 LFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALM 116
++ Y + F N T+N ++ + K+ +D + L EM + D ++ +
Sbjct: 165 IYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVIS 224
Query: 117 TLAEV---RELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-W 172
++ EV +E +++ F E + + N ++ LC+ A L+ ++ E
Sbjct: 225 SMCEVGLVKEGRELAERF--------EPVVSVYNALINGLCKEHDYKGAFELMREMVEKG 276
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
I PN I+Y LI C+ G + A M G P+I + +++ F +A+
Sbjct: 277 ISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDAL 336
Query: 233 KVF-QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
++ QM+R + + Y ++ C G I +A ++ M + G + T S+I
Sbjct: 337 DLWNQMIRGFGLQP-NVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLIN 395
Query: 292 GLLARGRLREAY----KVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
G RG L A K++ P++ +Y +++ L R + +EA + M K C P
Sbjct: 396 GFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAP 455
Query: 348 TMHTYIMLLQGHLGKRGR---------------KGPDPLVNFDTIFVGGLVKAGKSLDAA 392
++ T+ ++G L GR + P +V ++ + + GL KA + +A
Sbjct: 456 SVPTFNAFIKG-LCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNEL-LDGLAKANRIEEAY 513
Query: 393 KYVERVMNRGVEVPRFDYNKFLHYYSN 419
+ RGVE YN LH N
Sbjct: 514 GLTREIFMRGVEWSSSTYNTLLHGSCN 540
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 125/270 (46%), Gaps = 15/270 (5%)
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
+I Y VG A +++ + + G +PS+ + + +++T N+ V++ M+
Sbjct: 117 VISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDG 176
Query: 243 MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
+ + TY +++ +CK K+ A +L EM +G D ++ +++I + G ++E
Sbjct: 177 FEP-NVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEG 235
Query: 303 YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ----- 357
++ E E P +S+Y+ LI GL + + A ++ REM+++G P + +Y L+
Sbjct: 236 RELAERFE-PVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNS 294
Query: 358 -------GHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAK-YVERVMNRGVEVPRFD 409
L + ++G P + + V G G + DA + + + G++
Sbjct: 295 GQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVA 354
Query: 410 YNKFLHYYSNEEGVVMFEEVGKKLREVGLA 439
YN + + + +V V + E+G +
Sbjct: 355 YNTLVQGFCSHGNIVKAVSVFSHMEEIGCS 384
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 111/274 (40%), Gaps = 42/274 (15%)
Query: 126 KMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLI 184
K V+ F M + GC ++ ++ +R + A Y+ K L+ PN + Y ++
Sbjct: 370 KAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMV 429
Query: 185 KGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD 244
+ C EA + +M+ E PS+ + I+ + D A KVF+ M +
Sbjct: 430 EALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRC 489
Query: 245 DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIE------------------------ 280
+ TY ++D + K +I +AY + E+F RG+E
Sbjct: 490 PPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQ 549
Query: 281 -----------ADNLTLSSIIYGLLARGRLREAYKVVEEIE------KPDISLYHGLIKG 323
D +T++ II +G+ A ++++ + +PD+ Y +I G
Sbjct: 550 LVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWG 609
Query: 324 LLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
L R + + MI G P++ T+ +L+
Sbjct: 610 LCRSNCREDGVILLERMISAGIVPSIATWSVLIN 643
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 124/266 (46%), Gaps = 23/266 (8%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
L+ +K N Y L+KG C GD+ +A + N M G +P + MIE + K+
Sbjct: 368 LARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYL---KE 424
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYR--IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTL 286
+V ++ + +L + Y ++I+ +C+ G I A + E M G++ + +
Sbjct: 425 QNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIY 484
Query: 287 SSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIK 342
+++I G + GR +EA ++++ ++K PD+ Y+ +I GL + R+ EA EMI+
Sbjct: 485 TTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIE 544
Query: 343 RGCEPTMHTYIMLLQGHLGKRGRK-------------GPDPLVNFDTIFVGGLVKAGKSL 389
RG +P ++TY L+ G+ K G G P T + G K G +
Sbjct: 545 RGLKPNVYTYGALIHGYC-KSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTT 603
Query: 390 DAAKYVERVMNRGVEVPRFDYNKFLH 415
+A ++ R V Y+ +H
Sbjct: 604 EATSIFRCMLGRSVHPDVRTYSALIH 629
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 118/241 (48%), Gaps = 6/241 (2%)
Query: 124 LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAK-YLILKLSEWIKPNEIAYGW 182
++ V +M+ G + + N V+ LC+ + + EAK YL+ + +KPN YG
Sbjct: 497 FQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGA 556
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
LI GYC G++ A + + M G P+ V +I+ + K EA +F+ M + R
Sbjct: 557 LIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCM-LGR 615
Query: 243 MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
+ TY +I + + GK+ A +L E ++G+ D T +SII G +G + +A
Sbjct: 616 SVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKA 675
Query: 303 YKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+++ E + + P+I Y+ LI GL + A ++F + +G TY ++ G
Sbjct: 676 FQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDG 735
Query: 359 H 359
+
Sbjct: 736 Y 736
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 169/383 (44%), Gaps = 25/383 (6%)
Query: 78 NRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHIMND 136
N ++ + K+ ++LFW M +++D T+ + K+ M +
Sbjct: 205 NGLLSDLLKANKLELFWRFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEE 264
Query: 137 CGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL--SEWIKPNEIAYGWLIKGYCDVGDLI 194
GC SL N V+ LC+ V EA + + KL + + + Y LI G+
Sbjct: 265 KGCSPSLVTYNVVIGGLCRAGEVDEA-FELKKLMDKKGLVADVFTYSILIDGFGKQKRCT 323
Query: 195 EASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIV 254
EA + M +G +P +I+ F + EA +V + M + R L L TY +
Sbjct: 324 EAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEM-LARGVKLNLFTYNAL 382
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK--- 311
+ +CK G + +A +L EM GI+ D T +++I G L ++ E++K
Sbjct: 383 VKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNL 442
Query: 312 -PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR----- 365
P +I GL R +A++VF M+ G +P Y L++GH+ + GR
Sbjct: 443 VPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHV-QEGRFQEAV 501
Query: 366 --------KGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHY 416
KG P ++ ++++ +G L K+ K +A Y+ ++ RG++ + Y +H
Sbjct: 502 RILKVMDKKGVQPDVLCYNSVIIG-LCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHG 560
Query: 417 YSNEEGVVMFEEVGKKLREVGLA 439
Y + + + K++ G+A
Sbjct: 561 YCKSGEMQVADRYFKEMLGCGIA 583
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 131/286 (45%), Gaps = 18/286 (6%)
Query: 149 VVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEG 207
++ LC+ + +A + + +S +KPN + Y LIKG+ G EA +I +M +G
Sbjct: 452 IINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKG 511
Query: 208 FEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQA 267
+P + + +I K K +EA K + + ++R + TY +I CK G++ A
Sbjct: 512 VQPDVLCYNSVIIGLCKSRKMEEA-KDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVA 570
Query: 268 YTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV----VEEIEKPDISLYHGLIKG 323
+EM GI +++ +++I G G EA + + PD+ Y LI G
Sbjct: 571 DRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHG 630
Query: 324 LLRLRRAREATQVFREMIKRGCEPTMHTYIMLL-----QGHLGKR-------GRKGPDPL 371
LLR + + A ++ E +++G P + TY ++ QG +GK +KG P
Sbjct: 631 LLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPN 690
Query: 372 VNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
+ + GL KAG+ A + + + +G+ Y + Y
Sbjct: 691 IITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGY 736
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 99/198 (50%), Gaps = 8/198 (4%)
Query: 169 LSEWIK----PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFK 224
LSE+++ P+ Y +I G+C G + +A ++ M +G P+I + +I K
Sbjct: 644 LSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCK 703
Query: 225 INKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNL 284
+ + A ++F + K + + TY +ID CK G +S+A+ + +EM +G+ D+
Sbjct: 704 AGEIERARELFDGIPGKGLAHNAV-TYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSF 762
Query: 285 TLSSIIYGLLARGRLREAYKV-VEEIEK--PDISLYHGLIKGLLRLRRAREATQVFREMI 341
S++I G G +A + +E ++K S + L+ G + + EA Q+ +M+
Sbjct: 763 VYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMV 822
Query: 342 KRGCEPTMHTYIMLLQGH 359
+ +P TY +L+ H
Sbjct: 823 DKHVKPDHVTYTILIDYH 840
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 121/279 (43%), Gaps = 8/279 (2%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVR-ELKKMV 128
AHN++T+ ++D KS N+ + EM + + D AL+ +K +
Sbjct: 722 LAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKAL 781
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGY 187
+ F G S LN ++ C+ V+EA L+ + + +KP+ + Y LI +
Sbjct: 782 SLFLESVQKGFA-STSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYH 840
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C G L EA + + M P+ ++ + + E +F M K ++ G
Sbjct: 841 CKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDG 900
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
+ T+ ++ID K G + ++++M K+G +I L + + E KV+E
Sbjct: 901 V-TWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLE 959
Query: 308 EIEKPDISLYHGLIKGLLRL----RRAREATQVFREMIK 342
+IE+ ++L L+R + A +V + M++
Sbjct: 960 KIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVR 998
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 64/309 (20%), Positives = 130/309 (42%), Gaps = 41/309 (13%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIM 134
T++ ++ + ++ + E L E + LV D T+ + + + K M
Sbjct: 623 TYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYM 682
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDL 193
G ++ N ++ LC+ + A+ L + + + N + Y +I GYC G+L
Sbjct: 683 CQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNL 742
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR----------- 242
+A ++++ MT +G P V +I+ K ++A+ +F + V++
Sbjct: 743 SKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLF-LESVQKGFASTSSLNAL 801
Query: 243 MDDLGLS-----------------------TYRIVIDWMCKRGKISQAYTMLEEMFKRGI 279
MD S TY I+ID+ CK G + +A +M KR +
Sbjct: 802 MDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNL 861
Query: 280 EADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQ 335
+ LT ++++ G GR E + + +E+ +PD + +I L+ + +
Sbjct: 862 MPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLK 921
Query: 336 VFREMIKRG 344
+ +M+K+G
Sbjct: 922 LVDDMLKKG 930
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 89/211 (42%), Gaps = 36/211 (17%)
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK----VV 306
+ ++ID K+G +A + + G L + ++ LL +L ++ ++
Sbjct: 169 FELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGML 228
Query: 307 EEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK 366
E D+ Y LI R A+E ++ EM ++GC P++ TY
Sbjct: 229 EANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTY-------------- 274
Query: 367 GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMN-RGVEVPRFDYNKFLHYYSNE----E 421
+ +GGL +AG+ +D A ++++M+ +G+ F Y+ + + + E
Sbjct: 275 ---------NVVIGGLCRAGE-VDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTE 324
Query: 422 GVVMFEEV---GKKLREVGLADLADIFQRYG 449
+M EE+ G K V L D F R G
Sbjct: 325 AKLMLEEMFSKGLKPGHVAYTALIDGFMRQG 355
>gi|410109915|gb|AFV61037.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
brasiliensis]
Length = 427
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 138/288 (47%), Gaps = 41/288 (14%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T + L L +++ K + F+ + +CG SL N ++ C+ + A+ + +
Sbjct: 105 TCRKVLEHLMKLKYFKLVWGFYKXILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAI 164
Query: 170 SEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++W ++P+ ++Y L+ GY +GDL E ++ + M G +P + +I K +K
Sbjct: 165 TKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKM 224
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
D+A ++F M VK + G+ T+ +ID CK G++ A + + M + + D +T ++
Sbjct: 225 DDANELFDEMLVKGLVPNGV-TFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNT 283
Query: 289 IIYGLLARGRLREAYKVVEEIE----KPD------------------------------- 313
+IYGL +G L++A+ +++E+ KPD
Sbjct: 284 LIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQEN 343
Query: 314 ISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
I L Y LI GL + R+ +A ++ REM+ G +P TY M++
Sbjct: 344 IXLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPNXRTYTMIIN 391
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 94/230 (40%), Gaps = 49/230 (21%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
N +TF ++D K+ +DL E + M + L+ D
Sbjct: 242 NGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPD------------------------ 277
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVG 191
L N ++ LC++ + +A +LI ++S + +KP++I Y LI G C G
Sbjct: 278 ----------LITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKEG 327
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS-- 249
DL A + M E +I + + +A K+ ++ M +GL
Sbjct: 328 DLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVDAEKM-----LREMLSVGLKPN 382
Query: 250 --TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
TY ++I+ CK+G + + +L+EM + D S + Y +L G
Sbjct: 383 XRTYTMIINEFCKKGDVWKGSKLLKEM-----QRDGHVPSVVTYNVLMNG 427
>gi|410109953|gb|AFV61056.1| pentatricopeptide repeat-containing protein 11, partial [Nashia
inaguensis]
Length = 431
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 137/287 (47%), Gaps = 39/287 (13%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T + L L ++R K + F+ + +CG SL N ++ C+ + A+ + +
Sbjct: 109 TCRKVLEHLMKLRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAI 168
Query: 170 SEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++W ++P+ ++Y L+ GY +GDL E ++ + M G +P + +I K +K
Sbjct: 169 TKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKM 228
Query: 229 DEAMKVFQMMRVKRMDDLGLS----------------------------------TYRIV 254
D+A ++F M VK + G++ TY +
Sbjct: 229 DDANELFDEMLVKGLIPNGVTFTTLIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTL 288
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDI 314
I +CK+G + QA+ +++EM +G++ D T +++I G G L A+K + + + +I
Sbjct: 289 IYGLCKKGDLKQAHXLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQGNI 348
Query: 315 SL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
L Y LI GL + R+ +A ++ REM+ G +P + TY M++
Sbjct: 349 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDIGTYTMIIN 395
>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Glycine max]
Length = 905
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 88/401 (21%), Positives = 176/401 (43%), Gaps = 26/401 (6%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFF 131
+ +TF M+ ++ K+ +D E +E+ + V + +M V + + +
Sbjct: 306 DDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLL 365
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVG 191
GC S+ N ++ L ++ V EA ++ + PN +Y LI C G
Sbjct: 366 ERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAAPNLTSYNILIDMLCKAG 425
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM--RVKRMDDLGLS 249
+L A K+ + M + G P+I V+ MI+ K + DEA +F + +V D +
Sbjct: 426 ELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSV--- 482
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
T+ +ID + + GK++ AY + E+M G + + +S+I GR + +K+ +E+
Sbjct: 483 TFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEM 542
Query: 310 E----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
PD+ L + + + + + +F E+ +G P + +Y +L+ G +
Sbjct: 543 MHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFS 602
Query: 366 KGPDPL--------VNFDT----IFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
K L ++ DT I + G K+GK A + +E + +G++ Y
Sbjct: 603 KDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSV 662
Query: 414 LHYYSN----EEGVVMFEEVGKKLREVGLADLADIFQRYGK 450
+ + +E ++FEE K ++ + + + +GK
Sbjct: 663 IDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGK 703
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 141/328 (42%), Gaps = 40/328 (12%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVN 129
A N ++N ++D++ K+ ++ + M L N T I + L + + L + +
Sbjct: 408 APNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACS 467
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYC 188
F ++ C ++ L + V +A L K L PN + Y LI+ +
Sbjct: 468 IFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFF 527
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK------- 241
G + KI+ M G P + +++ ++ FK + ++ +F+ ++ +
Sbjct: 528 KCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVR 587
Query: 242 -----------------------RMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEM 274
M + GL Y IVID CK GK+++AY +LEEM
Sbjct: 588 SYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEM 647
Query: 275 FKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISL----YHGLIKGLLRLRRA 330
+G++ +T S+I GL RL EAY + EE + + L Y LI G ++ R
Sbjct: 648 KTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRI 707
Query: 331 REATQVFREMIKRGCEPTMHTYIMLLQG 358
EA + E++++G P +T+ LL
Sbjct: 708 DEAYLILEELMQKGLTPNTYTWNCLLDA 735
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 132/272 (48%), Gaps = 9/272 (3%)
Query: 92 LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVK 151
LF+E ++E G ++ + + I + + ++ K M G + ++ V+
Sbjct: 608 LFYE-MKEQGLH--LDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVID 664
Query: 152 TLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEP 210
L + + EA L + S+ + N + Y LI G+ VG + EA I + +G P
Sbjct: 665 GLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTP 724
Query: 211 SIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTM 270
+ + +++ K + DEA+ FQ M+ + + TY I+++ +CK K ++A+
Sbjct: 725 NTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEV-TYSIMVNGLCKVRKFNKAFVF 783
Query: 271 LEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLR 326
+EM K+G++ + +T +++I GL G + EA + E + PD + Y+ +I+GL
Sbjct: 784 WQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSN 843
Query: 327 LRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+A +A +F E +GC T ++LL
Sbjct: 844 ANKAMDAYILFEETRLKGCRIYSKTCVVLLDA 875
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 148/352 (42%), Gaps = 54/352 (15%)
Query: 72 HNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFF 131
H+ +N ++ ++ ++RN++ + L+EM M F
Sbjct: 130 HSPEAYNALLMLMARTRNLEYLEQILEEMS-------------------------MAGFG 164
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDV 190
N C +EM+ VK+ RKL EA +I + ++ +P AY LI
Sbjct: 165 PSNNTC-----IEMVASFVKS---RKL-REAFGVIETMRKFKFRPAYSAYTTLIGALSAA 215
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
+ + M + G+E ++ + +I F + + D A+ + M+ + L
Sbjct: 216 HEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSF-NADLVL 274
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y + ID K GK+ A+ E+ +G+ D++T +S+I L R+ EA ++ EE++
Sbjct: 275 YNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELD 334
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG-- 364
P + Y+ +I G + + EA + ++GC P++ Y +L LG++G
Sbjct: 335 SNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTC-LGRKGKV 393
Query: 365 ----------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
+ P + I + L KAG+ L+AA V+ M P
Sbjct: 394 EEALRILEAMKMDAAPNLTSYNILIDMLCKAGE-LEAALKVQDSMKEAGLFP 444
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 80/171 (46%), Gaps = 2/171 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
N + ++ ++D GK ID + L+E+ ++ L N T+ L L + E+ + + F
Sbjct: 690 NVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCF 749
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDV 190
M + C + + +V LC+ + +A ++ + +KPN I Y +I G V
Sbjct: 750 QNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARV 809
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK 241
G+++EA ++ G P + MIE NK +A +F+ R+K
Sbjct: 810 GNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRLK 860
>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
Length = 802
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 132/274 (48%), Gaps = 24/274 (8%)
Query: 106 VNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYL 165
N T+ L + ++L + + F+ M D GC + + +V LC+ + +A +
Sbjct: 356 ANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEV 415
Query: 166 ILKL-----------------SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGF 208
KL ++ I PN + YG LI G C +++A ++ + M G
Sbjct: 416 YTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGC 475
Query: 209 EPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL-GLSTYRIVIDWMCKRGKISQA 267
EP+ + D +I+ F K+ K D A +VF +R+ + L + TY +ID M K ++ A
Sbjct: 476 EPNHIIYDALIDGFCKVGKIDNAQEVF--LRMSKCGYLPTVHTYTSLIDAMFKDRRLDLA 533
Query: 268 YTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKG 323
+L +M + + +T +++I GL G ++A K++ +E+ P++ Y LI G
Sbjct: 534 MKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDG 593
Query: 324 LLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
L + + + Q+F +M +GC P TY +L+
Sbjct: 594 LGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLIN 627
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 143/350 (40%), Gaps = 62/350 (17%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFF 131
N+ F R + +GK D+ ++ ++ M + V D T+ + L E +++K F
Sbjct: 255 NTANFARCLCGMGK---FDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLF 311
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
M G + ++ + C+ L+ +A+ ++ S N + Y L+ Y
Sbjct: 312 QEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKA 371
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG--- 247
L +AS I+N M D G P+ +++ K + +A +V+ + + D++G
Sbjct: 372 KQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKL-IGTSDNVGSDF 430
Query: 248 -------------LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
+ TY +ID +CK K+ A +L+ M G E +++ ++I G
Sbjct: 431 YFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFC 490
Query: 295 ARGRLREAYKV---------------------------------------VEEIEKPDIS 315
G++ A +V VE P++
Sbjct: 491 KVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVV 550
Query: 316 LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
Y +I GL R+ ++A ++ M ++GC P + TY L+ G LGK G+
Sbjct: 551 TYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDG-LGKSGK 599
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 141/342 (41%), Gaps = 19/342 (5%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
N F + + R+ M DCGC N + ++C + + L
Sbjct: 176 NPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLA 235
Query: 167 LK-------LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMI 219
L L+ N++ + C +G A +I +M +GF P K+I
Sbjct: 236 LAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVI 295
Query: 220 ETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGI 279
+ K ++A +FQ M+ ++ + TY I+ID CK G I QA + +EM G
Sbjct: 296 TFLCEAMKVEKAFLLFQEMKSVGVNP-DVYTYTILIDSFCKAGLIEQARSWFDEMRSIGC 354
Query: 280 EADNLTLSSIIYGLLARGRLREAYKV----VEEIEKPDISLYHGLIKGLLRLRRAREATQ 335
A+ +T +++++ L +L +A + ++ P+ Y L+ GL + ++A +
Sbjct: 355 SANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACE 414
Query: 336 VFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYV 395
V+ ++I Y GK +V + + + GL KA K +DA + +
Sbjct: 415 VYTKLIGTSDNVGSDFYFE------GKHTDSIAPNVVTYGAL-IDGLCKAHKVVDAQELL 467
Query: 396 ERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVG 437
+ +++ G E Y+ + + + +EV ++ + G
Sbjct: 468 DAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCG 509
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/386 (20%), Positives = 159/386 (41%), Gaps = 66/386 (17%)
Query: 60 FQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-L 118
F + K A N +T+ ++D + K+ + E L M + AL+
Sbjct: 430 FYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGF 489
Query: 119 AEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQ-RKLVVEAKYLILKLSEWIKPNE 177
+V ++ F M+ CG ++ ++ + + R+L + K L + PN
Sbjct: 490 CKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNV 549
Query: 178 IAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQM 237
+ Y +I G C +G+ +A K+ ++M ++G P++ +I+ K K D ++++F
Sbjct: 550 VTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQ 609
Query: 238 MRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEM-------FKRG------------ 278
M K TYR++I+ C G + +A+++L EM + +G
Sbjct: 610 MSTKGCAP-NYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKKF 668
Query: 279 ---------IEADNLTLSSIIYGLL-----ARGRLREAYKVVEEIEKPDISL-------Y 317
+E+ + +YGLL GRL EA ++ +E+ + SL Y
Sbjct: 669 IASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMY 728
Query: 318 HGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTI 377
LI+ L + +A +++ E+ ++G P + ++ L++G
Sbjct: 729 TSLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKG------------------- 769
Query: 378 FVGGLVKAGKSLDAAKYVERVMNRGV 403
L+K K +A + + + GV
Sbjct: 770 ----LIKVNKWNEALQLCYSICDEGV 791
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/389 (20%), Positives = 145/389 (37%), Gaps = 64/389 (16%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMN 135
T+N +V ++ + +D+ + +EM DK F + A +E + I
Sbjct: 42 TYNALVQVLATAGQMDMGFRVQKEMSESGFCMDK-FTVGCFAQALCKEGRWSDALVMIER 100
Query: 136 DCGCEYSLE--MLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGD 192
+ ++ L+ + +++ L + L EA + ++ PN + Y L+ G+
Sbjct: 101 E---DFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQ 157
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS--- 249
L +I N+M EG P+ + + ++ ++ A K+ +KRM D G
Sbjct: 158 LGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKL-----LKRMADCGCPPGY 212
Query: 250 -TYRIVIDWMCKRGKISQ------AYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
Y I I +C ++ A + EEM + + ++ L G+ A
Sbjct: 213 VAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMA 272
Query: 303 YKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+++++ + PD S Y +I L + +A +F+EM G P ++TY
Sbjct: 273 FQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTY------ 326
Query: 359 HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYS 418
TI + KAG A + + + + G Y LH Y
Sbjct: 327 -----------------TILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAY- 368
Query: 419 NEEGVVMFEEVGKKLREVGLADLADIFQR 447
L+ L +DIF R
Sbjct: 369 --------------LKAKQLPQASDIFNR 383
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 70/179 (39%), Gaps = 13/179 (7%)
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE- 307
+TY ++ + G++ + + +EM + G D T+ L GR +A ++E
Sbjct: 41 ATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGRWSDALVMIER 100
Query: 308 EIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG--- 364
E K D L +I GL+ EA M C P + TY LL G L K+
Sbjct: 101 EDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQLGW 160
Query: 365 ---------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
++G +P + V A A K ++R+ + G YN F+
Sbjct: 161 CKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFI 219
>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
Length = 699
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 169/389 (43%), Gaps = 58/389 (14%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
N +T++ +++ + K +D +E Q M RR N T I + L + + +++ +
Sbjct: 301 NVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLY 360
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW--IKPNEIAYGWLIKGYCD 189
H M + GC + N ++ LC+ V EA L + E N + Y L GY
Sbjct: 361 HRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAA 420
Query: 190 VGDLIEASKIWNLMTDEGFEPS-----------------------------------IDV 214
+G + +A +I++++ D+GF P ++
Sbjct: 421 LGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNT 480
Query: 215 VDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEM 274
+ ++ F+ N + A+++F M + D L Y +V++ M + K +A +LE++
Sbjct: 481 LSAVLGGLFEGNHTERAIQLFDSMAARGCTDDAL-IYNLVVEGMARASKHDKALAVLEQV 539
Query: 275 FK---RGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRL 327
R + + +++ L G+ +A +++ ++ + +S Y+ L+ GL RL
Sbjct: 540 IDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRL 599
Query: 328 RRAREATQVFREMIKRGCEPTMHTYIMLLQG-----------HLGKRGRK-GPDPLVNFD 375
+R EATQVF M+ G P + T +++ L +R K G P +
Sbjct: 600 QRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETC 659
Query: 376 TIFVGGLVKAGKSLDAAKYVERVMNRGVE 404
+GG K+G++ A K +E + G+E
Sbjct: 660 NTLIGGYCKSGRADLARKLLEEMTEAGLE 688
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 157/378 (41%), Gaps = 24/378 (6%)
Query: 56 VYLFFQYTQKAQPCFAHNSITFNRMVDIIGK-SRNIDLFWETLQEMGRRRLVNDKTFKIA 114
V LFF + A+ HN + N +D++ + +R + M R + N T+ I
Sbjct: 7 VLLFFDW---ARSRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGIL 63
Query: 115 LMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIK 174
+ + +L + M G E + + ++K LC VVEA +++
Sbjct: 64 IRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKDCA 123
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+ + Y L+ C G EA + M +G P +I+ K +++A +V
Sbjct: 124 PDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRV 183
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMC-KRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
+ + + M + + + +I +C K + A +L + +G L + +I G
Sbjct: 184 LEDVIQRGMGNSD-AAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGF 242
Query: 294 LARGRLREAYKVVE-EIEK---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
L AYK++E IEK P++ + LI GL + R EA Q+ +M+ GC P +
Sbjct: 243 CKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNV 302
Query: 350 HTYIMLLQGHLGKRG-------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVE 396
TY ++ G L K+G R+ P V I + GL KA + +A +
Sbjct: 303 VTYSTVING-LCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYH 361
Query: 397 RVMNRGVEVPRFDYNKFL 414
R+ G YN +
Sbjct: 362 RMRETGCAPDIITYNSLI 379
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 163/385 (42%), Gaps = 29/385 (7%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMV 128
F + FN +++ K++++D ++ L+ M + V N TF I + L + + +
Sbjct: 228 FTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQ 287
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW--IKPNEIAYGWLIKG 186
M GC ++ + V+ LC++ V +A Y + +L E PN + + LI G
Sbjct: 288 QLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDA-YELFQLMERRNCPPNVVTHNILIDG 346
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
C + EA ++++ M + G P I + +I+ K + DEA ++FQ + +
Sbjct: 347 LCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAA 406
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
TY + G+++ A + + +G D T +S+I R E ++V
Sbjct: 407 NAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELV 466
Query: 307 EEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH--- 359
EE+ P ++ ++ GL A Q+F M RGC Y ++++G
Sbjct: 467 EEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARA 526
Query: 360 -------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
+ KR RK +P + V L + GK+ DA + + ++ RG
Sbjct: 527 SKHDKALAVLEQVIDKRDRKF-NPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAA 585
Query: 407 RFDYNKFLHYYSN----EEGVVMFE 427
YN+ L S +E +FE
Sbjct: 586 VSSYNRLLSGLSRLQRWDEATQVFE 610
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 78/155 (50%), Gaps = 5/155 (3%)
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
D F PS VD ++E+ ++ K D+A ++ M +R +S+Y ++ + + +
Sbjct: 544 DRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMS-ERGFAAAVSSYNRLLSGLSRLQRW 602
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGL 320
+A + E M G + T++ +I L + ++ +AY++V+ + K PDI + L
Sbjct: 603 DEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTL 662
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
I G + RA A ++ EM + G EP T+ +L
Sbjct: 663 IGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 697
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 4/138 (2%)
Query: 84 IGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSL 143
+GK+ + + E G V+ ++ L L+ ++ + F M G +
Sbjct: 564 VGKTDDAKQLLHKMSERGFAAAVS--SYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEI 621
Query: 144 EMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNL 202
+N V+ LC V +A L+ ++S+ P+ LI GYC G A K+
Sbjct: 622 STVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEE 681
Query: 203 MTDEGFEPSIDVVDKMIE 220
MT+ G EP+ D ++E
Sbjct: 682 MTEAGLEPN-DTTHDLLE 698
>gi|356497979|ref|XP_003517833.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 595
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 96/448 (21%), Positives = 189/448 (42%), Gaps = 72/448 (16%)
Query: 49 FPLSWRPVYLFFQYTQKAQPCFAHNSITFNR--MVDIIGKSRNIDL---FWETLQEMGRR 103
F LS P + + + + SI +R +D + +++D+ F+ + M
Sbjct: 16 FALSSNPTHFLLHPSHSSSTFSTYASINTSRAQFLDSLRNVKSVDVALDFYHKMVTMKPF 75
Query: 104 RLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQ-RKLVVEA 162
V D F + +A+++ ++ M+ G + ++ N V+ LC+ V
Sbjct: 76 PCVKD--FNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVPTHNIVINCLCRLNHTVFGF 133
Query: 163 KYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETF 222
L L ++P+ + + ++ G C G++ +A + + + D G+E +I
Sbjct: 134 SVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGL 193
Query: 223 FKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEAD 282
K+ A+ + M + + L ++ Y V+D +CK G + +A+ + +M +GI+ D
Sbjct: 194 CKVGHSSAALSYLKKMEEQNCN-LDVTAYNAVVDGLCKDGMVFEAWDLFSQMTGKGIQPD 252
Query: 283 NLTLSSIIYGLLARGRLREAYKVVEEIEKP------------------------------ 312
T + +I+GL R +EA ++ + +
Sbjct: 253 LFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIGGRFLKTGMISRAKSIFS 312
Query: 313 ---------DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG----- 358
D+ Y +I L + ++A +VF MI++GC P + TY L+ G
Sbjct: 313 FMGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFDLMIRKGCLPNIVTYTSLIHGWCEIK 372
Query: 359 -------HLGKRGRKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY 410
LG+ G DP +V ++T+ +GG KAGK + AAK + VM++ ++P
Sbjct: 373 NMNKAMYFLGEMVNNGLDPNIVTWNTL-IGGFCKAGKPV-AAKELFFVMHKHGQLPDLQT 430
Query: 411 NKFL-------HYYSNEEGVVMFEEVGK 431
+ H++S E + +F E+ K
Sbjct: 431 CAIILDGLFKCHFHS--EAMSLFRELEK 456
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 120/242 (49%), Gaps = 6/242 (2%)
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIA 179
+ ++K + F +M GC ++ ++ C+ K + +A Y + ++ + + PN +
Sbjct: 336 LNQMKDAMEVFDLMIRKGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVT 395
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
+ LI G+C G + A +++ +M G P + +++ FK + EAM +F+ +
Sbjct: 396 WNTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELE 455
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
K DL + Y I+++ MC GK++ A + + +G++ D +T + +I GL G L
Sbjct: 456 -KMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLL 514
Query: 300 REAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
+A ++ ++E+ PD Y+ ++GLLR ++T+ M +G T +L
Sbjct: 515 DDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANATTTKLL 574
Query: 356 LQ 357
+
Sbjct: 575 IN 576
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/384 (21%), Positives = 166/384 (43%), Gaps = 25/384 (6%)
Query: 75 ITFNRMVDIIGKSRNIDL---FWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVNF 130
+TF +V+ + N+ F + L++MG +D+ + A++ L +V +++
Sbjct: 149 VTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYE---SDRYTRGAIINGLCKVGHSSAALSY 205
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCD 189
M + C + N VV LC+ +V EA L +++ + I+P+ Y LI G C+
Sbjct: 206 LKKMEEQNCNLDVTAYNAVVDGLCKDGMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCN 265
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
EA+ + M +G P + + + F K A +F M ++ +
Sbjct: 266 FDRWKEAAPLLANMMRKGIMPDVQTFNVIGGRFLKTGMISRAKSIFSFMGHMGIEH-DVV 324
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
TY +I C ++ A + + M ++G + +T +S+I+G + +A + E+
Sbjct: 325 TYSSIIGVHCMLNQMKDAMEVFDLMIRKGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEM 384
Query: 310 EK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG----HLG 361
P+I ++ LI G + + A ++F M K G P + T ++L G H
Sbjct: 385 VNNGLDPNIVTWNTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFH 444
Query: 362 KRG--------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
+ D + +I + G+ +GK DA + + ++GV++ YN
Sbjct: 445 SEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIM 504
Query: 414 LHYYSNEEGVVMFEEVGKKLREVG 437
++ E + E++ K+ E G
Sbjct: 505 INGLCKEGLLDDAEDLLMKMEENG 528
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 140/320 (43%), Gaps = 32/320 (10%)
Query: 58 LFFQYTQKA-QP------CFAHNSITFNRMVDIIGKSRNIDLFWE----TLQEMGRRRLV 106
LF Q T K QP C H F+R W+ L M R+ ++
Sbjct: 240 LFSQMTGKGIQPDLFTYNCLIHGLCNFDR--------------WKEAAPLLANMMRKGIM 285
Query: 107 ND-KTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYL 165
D +TF + + + + + F M G E+ + + ++ C + +A +
Sbjct: 286 PDVQTFNVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEV 345
Query: 166 I-LKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFK 224
L + + PN + Y LI G+C++ ++ +A M + G +P+I + +I F K
Sbjct: 346 FDLMIRKGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCK 405
Query: 225 INKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNL 284
K A ++F +M K L T I++D + K S+A ++ E+ K + D +
Sbjct: 406 AGKPVAAKELFFVMH-KHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDII 464
Query: 285 TLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREM 340
S I+ G+ + G+L +A ++ + K D+ Y+ +I GL + +A + +M
Sbjct: 465 IYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKM 524
Query: 341 IKRGCEPTMHTYIMLLQGHL 360
+ GC P TY + +QG L
Sbjct: 525 EENGCPPDECTYNVFVQGLL 544
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 61/126 (48%), Gaps = 2/126 (1%)
Query: 111 FKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS 170
+ I L + +L + F ++ G + + N ++ LC+ L+ +A+ L++K+
Sbjct: 466 YSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKME 525
Query: 171 E-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD 229
E P+E Y ++G ++ +++K M +GF + K++ +F NK++
Sbjct: 526 ENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANATTT-KLLINYFSANKEN 584
Query: 230 EAMKVF 235
A +VF
Sbjct: 585 RAFQVF 590
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 149/337 (44%), Gaps = 44/337 (13%)
Query: 64 QKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVR 122
+ QP N +N ++D + K R + + EM + + D T+ + L +
Sbjct: 195 KNCQP----NVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLC 250
Query: 123 ELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYG 181
E K + + M D + N VV LC+ V EA ++ K+ + ++PN + Y
Sbjct: 251 EWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYT 310
Query: 182 WLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM--- 238
L+ G+C + ++ EA K+++ M +G P++ + +I + KI + D+AM +F M
Sbjct: 311 ALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQ 370
Query: 239 -----------------RVKRMDDL--------------GLSTYRIVIDWMCKRGKISQA 267
V+R+ D L TYRI++D++CK +++A
Sbjct: 371 ELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEA 430
Query: 268 YTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKG 323
+L+ + ++ D + I G+ G L A + + +PD+ Y +I G
Sbjct: 431 MALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMING 490
Query: 324 LLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL 360
L R EA+++FREM + GC Y + +G L
Sbjct: 491 LCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFL 527
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 145/320 (45%), Gaps = 37/320 (11%)
Query: 60 FQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLA 119
F + QP +++ FN+++ I K ++ +M +F I
Sbjct: 49 FNRMLRMQP--PPSTVDFNKLLTSIAKMKHHSTLLSLSHQM--------DSFGIP----P 94
Query: 120 EVRELKKMVNFFHIMNDCGCEYSLEMLNKVVK----------TLCQRKLVVEAK-----Y 164
+ L ++N F +N G ++ +L K++K T R + VE K +
Sbjct: 95 NIYTLHILINSFCHLNRVG--FAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALH 152
Query: 165 LILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFF 223
L K+ E +P+ + YG LI G C VG+ A ++ M + +P++ + +I++
Sbjct: 153 LFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLC 212
Query: 224 KINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADN 283
K + EA +F M K + + TY +I +C + T+L EM I D
Sbjct: 213 KDRQVTEAFNLFSEMVTKGISP-DIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDV 271
Query: 284 LTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFRE 339
++ ++++ L G++ EA+ VV+++ +P++ Y L+ G L EA +VF
Sbjct: 272 VSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDT 331
Query: 340 MIKRGCEPTMHTYIMLLQGH 359
M+ +GC P + +Y L+ G+
Sbjct: 332 MVCKGCMPNVISYNTLINGY 351
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 151/338 (44%), Gaps = 30/338 (8%)
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKP 175
T A +R L MV C+ ++ N ++ +LC+ + V EA L ++ ++ I P
Sbjct: 182 TSAAIRLLGSMVQK-------NCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISP 234
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
+ Y LI C++ + + + N M D P + + +++ K K EA V
Sbjct: 235 DIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVV 294
Query: 236 QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
M ++R + + TY ++D C ++ +A + + M +G + ++ +++I G
Sbjct: 295 DKM-IQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCK 353
Query: 296 RGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
R+ +A + E+ + PD Y LI GL + R ++A +F EM+ P + T
Sbjct: 354 IQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVT 413
Query: 352 YIMLLQGHLGK-----------RGRKGP--DPLVNFDTIFVGGLVKAGKSLDAAKYVERV 398
Y +LL +L K + +G DP + + I + G+ +AG+ A +
Sbjct: 414 YRILLD-YLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNL 472
Query: 399 MNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREV 436
++G++ + Y+ ++ + +E K RE+
Sbjct: 473 SSKGLQPDVWTYSIMINGLCRRG---LLDEASKLFREM 507
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 109/246 (44%), Gaps = 19/246 (7%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N I++N +++ K + ID EM R+ L+ D T+ + L V L+ + F
Sbjct: 340 NVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALF 399
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-----LKLSEWIKPNEIAYGWLIKG 186
H M C +L ++ LC+ + + EA L+ L I+ N IA I G
Sbjct: 400 HEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIA----IDG 455
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
C G+L A +++ ++ +G +P + MI + DEA K+F + MD+
Sbjct: 456 MCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLF-----REMDEN 510
Query: 247 GLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
G + Y + + + S+A +L+EM RG AD T++ + L G +
Sbjct: 511 GCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSL 570
Query: 303 YKVVEE 308
+++ E
Sbjct: 571 KQILRE 576
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 101/242 (41%), Gaps = 41/242 (16%)
Query: 242 RMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
+MD G+ T I+I+ C ++ A+++L ++ K G + D T +++I G+ G
Sbjct: 86 QMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEG 145
Query: 298 RLREAY----KVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYI 353
++ EA K++ E +PD+ Y LI GL ++ A ++ M+++ C+P + Y
Sbjct: 146 KIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAY- 204
Query: 354 MLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
+TI + L K + +A ++ +G+ F YN
Sbjct: 205 ---------------------NTI-IDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSL 242
Query: 414 LHYYSN-----EEGVVMFEEVGKKLRE--VGLADLADIFQRYGKKMATR---ERRRNRAI 463
+H N ++ E V K+ V + D + GK ++ R +
Sbjct: 243 IHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGV 302
Query: 464 EP 465
EP
Sbjct: 303 EP 304
>gi|9755668|emb|CAC01820.1| putative protein [Arabidopsis thaliana]
Length = 532
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 95/433 (21%), Positives = 171/433 (39%), Gaps = 85/433 (19%)
Query: 21 SPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRM 80
S L + L C+ ++E ++I + W + FF + K Q + + ++ M
Sbjct: 69 SDRKELRNKLEECDVKPSNELVVEILSRVRNDWETAFTFFVWAGKQQG-YVRSVREYHSM 127
Query: 81 VDIIGKSRNIDLFWETLQEMGR--RRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCG 138
+ I+GK R D W + EM + LVN +T I + V ++ K +N FH
Sbjct: 128 ISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFK 187
Query: 139 CEYSLEMLNKVVKTLCQRKLVVEAKYLI---------------LKLSEW----------- 172
E ++ ++ LC+ K V +A +LI + L+ W
Sbjct: 188 LEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPREAE 247
Query: 173 ----------IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETF 222
+K + ++Y +I Y G L + K+++ M E EP V + ++
Sbjct: 248 RVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHAL 307
Query: 223 FKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEAD 282
K + EA + + M ++ + + TY +I +CK K +A + +EM ++G+
Sbjct: 308 AKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGL--- 364
Query: 283 NLTLSSIIYGLLARGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIK 342
P I YH ++ LR E ++ +M K
Sbjct: 365 ----------------------------FPTIRTYHAFMR---ILRTGEEVFELLAKMRK 393
Query: 343 RGCEPTMHTYIMLLQGHLGKRG------------RKGPDPLVNFDTIFVGGLVKAGKSLD 390
GCEPT+ TYIML++ R K P ++ + + GL GK +
Sbjct: 394 MGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEE 453
Query: 391 AAKYVERVMNRGV 403
A Y + + ++G+
Sbjct: 454 AYGYYKEMKDKGM 466
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 122/262 (46%), Gaps = 17/262 (6%)
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
NE++Y LI G+C+VG + EA +++ M ++G P + ++ F ++ K+ EA+K F
Sbjct: 259 NEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFF 318
Query: 236 QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
+ M V+ + + TY ++ID+ CK GK+ + ML M ++G+ + + +++I G
Sbjct: 319 EEM-VENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCK 377
Query: 296 RGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
RG + +A V++ ++ P+ Y+ LI G R + A + +M + P + T
Sbjct: 378 RGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVT 437
Query: 352 YIMLLQGHLGKRG------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVM 399
Y L+ G R + G P F+ L K GK A + E +
Sbjct: 438 YNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLK 497
Query: 400 NRGVEVPRFDYNKFLHYYSNEE 421
+ E F Y + Y E
Sbjct: 498 EKHAEANEFLYTALIDGYCKAE 519
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 126/276 (45%), Gaps = 29/276 (10%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N+++ C++K + A L+ K+ E + PN + Y LI G C + A ++ +LM
Sbjct: 404 NELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIK 463
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKIS 265
+GF P I+ K+ K ++A +VF+ ++ K + Y +ID CK K S
Sbjct: 464 DGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEF-LYTALIDGYCKAEKFS 522
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLI 321
A+ + + M G +++T + ++ GL G++ +A +V+ + KP + Y LI
Sbjct: 523 DAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILI 582
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGG 381
+ +LR A +MI GC+P + TY T F+
Sbjct: 583 EEILRESDFDRANMFLDQMISSGCQPNVVTY-----------------------TAFIKA 619
Query: 382 LVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
+ G+ L+A + V ++ G+ + F Y+ ++ Y
Sbjct: 620 YCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAY 655
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/401 (20%), Positives = 159/401 (39%), Gaps = 58/401 (14%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAE 120
Y K P N +T+N ++ + K+R +D W M + V D +TF + L +
Sbjct: 427 YENKLSP----NLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCK 482
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIA 179
+ ++++ F + + E + + ++ C+ + +A L + L E PN I
Sbjct: 483 MGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSIT 542
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
+ L+ G G + +A + ++M +P++ +IE + + D A M
Sbjct: 543 FNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQM- 601
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
+ + TY I C++G++ +A M+ ++ + GI D+ ++ G+L
Sbjct: 602 ISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQL 661
Query: 300 REAYKVV----EEIEKPDISLYHGLIKGLLRLRRAREA---------------------- 333
A+ V+ + +P Y L+K L+ + +E
Sbjct: 662 DSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIAD 721
Query: 334 ----TQVFREMIKRGCEPTMHTYIMLLQG-----HLGKRGR-------KGPDPLVNFDTI 377
T +F +M+++GC P ++TY L++G HL R G P N
Sbjct: 722 FEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNS 781
Query: 378 FVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYS 418
+ K G +A + ++ +M +YN H S
Sbjct: 782 LLSSCCKLGMHEEALRLLDSMM---------EYNHLAHLES 813
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 72/144 (50%), Gaps = 3/144 (2%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
PN Y LIKG C V L A +++N M + G PS ++ + ++ + K+ +EA+++
Sbjct: 739 PNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRL 798
Query: 235 F-QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
MM + L +Y++++ + ++G +A + + G D + ++ GL
Sbjct: 799 LDSMMEYNHLAH--LESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGL 856
Query: 294 LARGRLREAYKVVEEIEKPDISLY 317
+ +G + E ++ + +EK L+
Sbjct: 857 VRKGYVDECSQLRDIMEKTGCRLH 880
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 144/359 (40%), Gaps = 71/359 (19%)
Query: 67 QPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGR---RRLVNDKTFKIALMTLAEVRE 123
+ CF NSITFN ++D + K ++ + MG+ + V+ T+ I + + +
Sbjct: 534 EGCFP-NSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVH--TYTILIEEILRESD 590
Query: 124 LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGW 182
+ F M GC+ ++ +K C++ ++EA+ +++K+ E I + Y
Sbjct: 591 FDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDV 650
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIE--TFFKINKDDEAMKV------ 234
L+ Y +G L A + M D G EPS +++ F K NK+ + +
Sbjct: 651 LVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNIS 710
Query: 235 -----------FQM--MRVKRMDDLG----LSTYRIVIDWMCKRGKISQAYTMLEEMFKR 277
F++ M ++M + G ++TY +I +CK +S A+ + M +
Sbjct: 711 VDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKES 770
Query: 278 GIEAD----NLTLSS-------------------------------IIYGLLARGRLREA 302
GI N LSS ++ GL +G +A
Sbjct: 771 GISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKA 830
Query: 303 YKVVEEIEKP----DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
++ + D ++ L+ GL+R E +Q+ M K GC T+ ML Q
Sbjct: 831 EEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQLRDIMEKTGCRLHSDTHTMLSQ 889
>gi|297727717|ref|NP_001176222.1| Os10g0495400 [Oryza sativa Japonica Group]
gi|255679525|dbj|BAH94950.1| Os10g0495400, partial [Oryza sativa Japonica Group]
Length = 438
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 141/299 (47%), Gaps = 33/299 (11%)
Query: 149 VVKTLCQRKLVVEAKYLILK-LSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDE 206
++K LC K +A ++L+ ++E P+ + L+KG CD EA ++ ++M D+
Sbjct: 136 LLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADD 195
Query: 207 ---GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGK 263
G P + +I FFK D+A + M +R+ + TY +I +CK
Sbjct: 196 RGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISP-NVVTYSSIIAALCKAQA 254
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHG 319
+ +A +L M K G+ D +T +SI++G + G+ +EA ++++ +P++ Y
Sbjct: 255 MDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYRS 314
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFV 379
L+ L + R EA ++F M KRG EP + TY LLQG+ K
Sbjct: 315 LMNYLCKNGRCTEARKIFDSMTKRGLEPDIATYRTLLQGYATK----------------- 357
Query: 380 GGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
G LV+ LD ++ G++ +N + Y+ +E V V K+R+ GL
Sbjct: 358 GALVEMHALLDL------MVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGL 410
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 91/188 (48%), Gaps = 5/188 (2%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
L I PN + Y +I C + +A ++ N M G P + ++ + +
Sbjct: 231 LDRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQP 290
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
EA+ + MR ++ + TYR +++++CK G+ ++A + + M KRG+E D T +
Sbjct: 291 KEAIGTLKKMRSDGVEP-NVVTYRSLMNYLCKNGRCTEARKIFDSMTKRGLEPDIATYRT 349
Query: 289 IIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
++ G +G L E + +++ + + PD +++ LI + + +A VF +M + G
Sbjct: 350 LLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHG 409
Query: 345 CEPTMHTY 352
P + Y
Sbjct: 410 LNPNVVCY 417
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 94/202 (46%), Gaps = 3/202 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFF 131
N +T++ ++ + K++ +D E L M + ++ D T+ L + K+ +
Sbjct: 238 NVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTL 297
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
M G E ++ ++ LC+ EA+ + +++ ++P+ Y L++GY
Sbjct: 298 KKMRSDGVEPNVVTYRSLMNYLCKNGRCTEARKIFDSMTKRGLEPDIATYRTLLQGYATK 357
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G L+E + +LM G +P V + +I + K K D+AM VF MR ++ +
Sbjct: 358 GALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNP-NVVC 416
Query: 251 YRIVIDWMCKRGKISQAYTMLE 272
Y VID +CK G + A E
Sbjct: 417 YGTVIDVLCKSGSVDDAMLYFE 438
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 95/227 (41%), Gaps = 30/227 (13%)
Query: 221 TFFKINKDDEAMKVFQMMRVKRM--DDL--GLSTYRIVIDWMCKRGKISQAYTMLEEMFK 276
T + +D A V R+ R D++ L TY I+I C+ G++ + L + K
Sbjct: 64 TLTDVARDSPAAAVSLFNRMARAGADEVTPDLCTYSILIGCCCRAGRLDLGFAALGNVIK 123
Query: 277 RGIEADNLTLSSIIYGLLARGRLREAYKVV-----EEIEKPDISLYHGLIKGLLRLRRAR 331
+G + +T + ++ GL A R +A +V E PD+ L+KGL R++
Sbjct: 124 KGFRVEAITFAPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQ 183
Query: 332 EATQVFREMIKR---GCEPTMHTYIMLLQGHLGKRG---------------RKGPDPLVN 373
EA ++ M G P + +Y ++ G K G R P+ +V
Sbjct: 184 EALELLHMMADDRGGGSPPDVVSYTTVINGFF-KEGDSDKAYSTYHEMLDRRISPN-VVT 241
Query: 374 FDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE 420
+ +I + L KA A + + ++ GV YN LH Y +
Sbjct: 242 YSSI-IAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSS 287
>gi|357148528|ref|XP_003574800.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
mitochondrial-like [Brachypodium distachyon]
Length = 464
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 160/384 (41%), Gaps = 46/384 (11%)
Query: 65 KAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRE 123
+A+P F+ ++ F+ ++ + ++R W +M L ++ TF + + R
Sbjct: 108 RAKPNFSPSAEHFDALLLPLARARLFTHLWTQASDMRALGLPLSPATFSAVISSYGHSRL 167
Query: 124 LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGW 182
++ V F+ + GC + E+ N ++ LC A L+ +++ + + P+ +
Sbjct: 168 PEQAVEVFNRLPHFGCPQTTEVYNALLDALCSNGNFAGAYKLLRRMARKGVAPDRATFST 227
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
L+ +C G L EA + M GF P + D +++ + + +EA K F + K
Sbjct: 228 LVDAWCASGKLREAQAFLDDMASRGFRPPVRGRDLLVDGLVRAGRLEEA-KAFAVRFTKE 286
Query: 243 MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
++T+ + +C G + A +L + RG+ D T ++ + G++ EA
Sbjct: 287 GVLPDVATFNSLAQALCDAGDVKFAVGLLADASSRGLCPDISTYKVMLPAVAKAGQIEEA 346
Query: 303 ----YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
Y VE+ +P SLY ++K L + R +A F +M +G P Y+ML++
Sbjct: 347 FRLFYAAVEDGHRPFPSLYAAIVKALCKAGRFGDAFAFFGDMKSKGHPPNRPVYVMLVK- 405
Query: 359 HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYS 418
V+ G+ LDAA Y+ + G PR
Sbjct: 406 ----------------------MCVRGGRFLDAANYLVEMSEAGF-APR----------- 431
Query: 419 NEEGVVMFEEVGKKLREVGLADLA 442
V F V LR +G DLA
Sbjct: 432 ----VPTFNAVVDGLRHLGKHDLA 451
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 71/164 (43%), Gaps = 2/164 (1%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHIM 134
TFN + + + ++ L + R L D T+K+ L +A+ ++++ F+
Sbjct: 294 TFNSLAQALCDAGDVKFAVGLLADASSRGLCPDISTYKVMLPAVAKAGQIEEAFRLFYAA 353
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDL 193
+ G + +VK LC+ +A + S+ PN Y L+K G
Sbjct: 354 VEDGHRPFPSLYAAIVKALCKAGRFGDAFAFFGDMKSKGHPPNRPVYVMLVKMCVRGGRF 413
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQM 237
++A+ M++ GF P + + +++ + K D A ++ Q+
Sbjct: 414 LDAANYLVEMSEAGFAPRVPTFNAVVDGLRHLGKHDLAQRMEQL 457
>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 580
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 97/408 (23%), Positives = 173/408 (42%), Gaps = 72/408 (17%)
Query: 41 FFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEM 100
FFL+ C ++ FF ++ P + +S FN ++ + K ++ + +M
Sbjct: 38 FFLRHCKTGNVTATHALHFFHLMMRSTPTPSLSS--FNHLLSGLAKIKHYSQVFSLYNQM 95
Query: 101 GRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLV 159
L +D+ T I L L V L++ F + G ++ N ++K LC +
Sbjct: 96 RLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRI 155
Query: 160 VEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKM 218
EA L L++ + P+ + YG LIKG C G++ A K+ M ++ I+ +
Sbjct: 156 SEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNV 215
Query: 219 IETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEM---- 274
I TY I++D +CK G+ +A + EEM
Sbjct: 216 I------------------------------TYNIIVDGLCKVGREDEAKQLFEEMKTQG 245
Query: 275 ------FKRGIEADNLTLSSIIYGLLARGRLREAYKV----VEEIEKPDISLYHGLIKGL 324
+G++ D +T + +I L G++ EA K+ +E PD+ Y+ LI+G
Sbjct: 246 MIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGF 305
Query: 325 LRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------------------LGKRGRK 366
+ A ++F M +GCEP + +Y +L+ G+ +GKR
Sbjct: 306 CMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKR--- 362
Query: 367 GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
P+ ++ +D++ + G+ AGK DA K + G+ + Y FL
Sbjct: 363 -PN-VITYDSL-LKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFL 407
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 145/302 (48%), Gaps = 17/302 (5%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-----------TFKIALMTLAEV 121
N IT+N +VD + K D + +EM + ++ ++ TF + + TL +
Sbjct: 214 NVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKE 273
Query: 122 RELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAY 180
++ + +M + G L N +++ C + A+ L + + S+ +P+ I+Y
Sbjct: 274 GKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISY 333
Query: 181 GWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
LI GY + EA K++N M G P++ D +++ F K D+A K+F +M+
Sbjct: 334 NVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKA 393
Query: 241 KRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
+ + TY I +D +CK + +A + E+ + + L+ +I GL G+L
Sbjct: 394 HGIAE-NSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLE 452
Query: 301 EAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
A+++ E++ +P++ Y +I G R + +A + ++M GC P + TY L+
Sbjct: 453 TAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLM 512
Query: 357 QG 358
+G
Sbjct: 513 RG 514
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 148/307 (48%), Gaps = 25/307 (8%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGR---RRLVNDK----TFKIALMTLAEV------ 121
+T+ ++ + + NI++ + QEM R +N K T+ I + L +V
Sbjct: 175 VTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEA 234
Query: 122 ----RELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPN 176
E+K + M D G + + N ++ TLC+ V+EAK L+ + + I P+
Sbjct: 235 KQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPD 294
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF- 235
+ Y LI+G+C VGDL A +++ M +G EP + + +I + K K +EAMK++
Sbjct: 295 LVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYN 354
Query: 236 QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
+M+ V + + + TY ++ + GK+ A + M GI ++ T + GL
Sbjct: 355 EMLLVGKRPN--VITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCK 412
Query: 296 RGRLREAYKVVEEIEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
L EA K+ E++ + L + LI GL + + A ++F ++ G EP + T
Sbjct: 413 NDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVT 472
Query: 352 YIMLLQG 358
Y +++ G
Sbjct: 473 YTIMIHG 479
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 72/146 (49%), Gaps = 1/146 (0%)
Query: 170 SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD 229
+ I N YG + G C L EA K++ + F+ I+ ++ +I+ K K +
Sbjct: 393 AHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLE 452
Query: 230 EAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSI 289
A ++F+ + + + TY I+I C+ G++ +A ++++M G D +T +++
Sbjct: 453 TAWELFEKLS-NEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTL 511
Query: 290 IYGLLARGRLREAYKVVEEIEKPDIS 315
+ G +L E +++ + + D+S
Sbjct: 512 MRGFYESNKLEEVVQLLHRMAQKDVS 537
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 97/213 (45%), Gaps = 8/213 (3%)
Query: 73 NSITFNRMVDII---GKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
N IT++ ++ I GK + + ++ G N T+ I L L + L + +
Sbjct: 364 NVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAE--NSYTYGIFLDGLCKNDCLFEAMK 421
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYC 188
F + + +E LN ++ LC+ + A L KLS E +PN + Y +I G+C
Sbjct: 422 LFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFC 481
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
G + +A+ + M G P I + ++ F++ NK +E +++ M K + +
Sbjct: 482 REGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAI 541
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEM-FKRGIE 280
T IV+D + K K + +L ++G++
Sbjct: 542 -TCSIVVDMLSKDEKYQECLHLLPRFPIQKGVD 573
>gi|255660826|gb|ACU25582.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 418
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 138/287 (48%), Gaps = 39/287 (13%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T K L L +++ + F+ + +CG SL N ++ C+ + A+ + +
Sbjct: 103 TCKKMLEHLVKLKYFNLVWAFYEEILECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAI 162
Query: 170 SEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++W ++P+ ++Y L+ GY +GDL E K+ + M G +P + +I K +K
Sbjct: 163 TKWGLRPSVVSYNTLMNGYIRLGDLNEGFKLKSAMHASGVQPDVYTYSVLINGLCKESKM 222
Query: 229 DEAMKVFQMMRVKRMDDLGLS----------------------------------TYRIV 254
D+A ++F+ M VK + G++ TY +
Sbjct: 223 DDANELFEEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTL 282
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY----KVVEEIE 310
I +CK+G ++QA+ +++EM +G++ D +T +++I G G L A+ ++++E
Sbjct: 283 IYGLCKKGALNQAHDLMDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENI 342
Query: 311 KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
+ D Y LI GL + R+ +A ++ REM+ G +P TY M++
Sbjct: 343 RLDDVAYTALISGLCQEGRSVDAEKMMREMLSFGLKPDTGTYTMIIN 389
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 96/240 (40%), Gaps = 71/240 (29%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
N +TF ++D K+ +DL E ++M + L+ D
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLLPD------------------------ 275
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVG 191
L N ++ LC++ + +A L+ ++S + +KP++I Y LI G C G
Sbjct: 276 ----------LITYNTLIYGLCKKGALNQAHDLMDEMSMKGLKPDKITYTTLIDGCCKEG 325
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTY 251
DL D FE ++ + I R+DD+ Y
Sbjct: 326 DL-----------DTAFEHRKRMIQENI----------------------RLDDVA---Y 349
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK 311
+I +C+ G+ A M+ EM G++ D T + II +G + + K+++E+++
Sbjct: 350 TALISGLCQEGRSVDAEKMMREMLSFGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQR 409
>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Glycine max]
Length = 642
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 165/366 (45%), Gaps = 25/366 (6%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGR-RRLVNDKTFKIALMTLAEVRELKKMVNFFHI 133
++F +++ S + E L +M R RR+ +K F + + +K V+ FH
Sbjct: 62 LSFYSLIESHASSLDFRSLEEVLHQMKRERRVFLEKNFIVMFKAYGKAHLPEKAVDLFHR 121
Query: 134 M-NDCGCEYSLEMLNKVVKTLCQRKLVVEA----KYLILKLSEWIKPNEIAYGWLIKGYC 188
M + C+ +++ N V+ + Q L A +++ S I PN + + +IK C
Sbjct: 122 MWGEFQCKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMC 181
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
+G + +A +++ + P ++ K + DEA+ + M+V+ L
Sbjct: 182 RLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFP-NL 240
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
+ ++I +CK+G + +A +++ MF +G + +T +++++GL +G+L +A ++ +
Sbjct: 241 VAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQ 300
Query: 309 IEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
+ P+ + LI G + RA + T+V + RG + Y L+ G L K G
Sbjct: 301 MVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISG-LCKEG 359
Query: 365 R-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
+ KG P + + GL + GK +A ++ + N+G F Y+
Sbjct: 360 KFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYS 419
Query: 412 KFLHYY 417
+ Y
Sbjct: 420 SLMRGY 425
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 148/349 (42%), Gaps = 27/349 (7%)
Query: 35 FNLTHEFFLQICNNFPLSWRPVYLFFQYTQKA-------------------QPCFAHNSI 75
FN EF+ + + L+ P L F KA + C A ++
Sbjct: 148 FNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNC-APDNY 206
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMG-RRRLVNDKTFKIALMTLAEVRELKKMVNFFHIM 134
T++ ++ + K ID L EM N F + + L + +L + M
Sbjct: 207 TYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNM 266
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDL 193
GC + N +V LC + + +A L+ ++ S PN++ +G LI G+ G
Sbjct: 267 FLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRA 326
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
+ +++ + G + V +I K K ++AM++++ M V + Y
Sbjct: 327 SDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEM-VGKGCGPNTIVYSA 385
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPD 313
+ID +C+ GK+ +A L EM +G ++ T SS++ G G +A V +E+ +
Sbjct: 386 LIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNN 445
Query: 314 I----SLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
Y LI GL + + EA V+++M+ RG + + Y ++ G
Sbjct: 446 CIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHG 494
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 82/183 (44%), Gaps = 11/183 (6%)
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
NE+ Y LI G C G +EA +W M G + + MI F N ++ +K+F
Sbjct: 449 NEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLF 508
Query: 236 -QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
QM+ + + TY I+++ C + I +A +L M +G + D +T + L
Sbjct: 509 NQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQGCDPDFITCDIFLKTL- 567
Query: 295 ARGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIM 354
R + E +++ L+ L++ +R A+++ M+ + P T+ M
Sbjct: 568 -RENMNPPQDGREFLDE--------LVVRLVKRQRTIGASKIIEVMMHKFLLPKASTWAM 618
Query: 355 LLQ 357
++Q
Sbjct: 619 VVQ 621
>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 597
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 149/323 (46%), Gaps = 46/323 (14%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIM 134
I+++ ++D + K R D + +EM + + +LM R +MVN
Sbjct: 243 ISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLMWEEAKRLFNEMVNQ---- 298
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGDL 193
G + ++ N ++ LC+ V+EAK L+ + + I PN + Y LI+G+C VGDL
Sbjct: 299 ---GVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDL 355
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ-MMRVKRMDDL------ 246
A +++ M +G EP + +I + K +K +EAMK++ M++V + D+
Sbjct: 356 NSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGAL 415
Query: 247 ---------------------------GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGI 279
L Y I ++ +CK G + +A + ++ I
Sbjct: 416 LTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNI 475
Query: 280 EADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQ 335
+ D + +I GL G+L A+++ E++ +PD+ Y+ +I R + +A
Sbjct: 476 KLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANI 535
Query: 336 VFREMIKRGCEPTMHTYIMLLQG 358
+F++M K GC P TY L++G
Sbjct: 536 LFQKMEKNGCTPDKITYATLIRG 558
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 114/505 (22%), Positives = 194/505 (38%), Gaps = 97/505 (19%)
Query: 27 HSSL--SSCNFNLTHEF------FLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFN 78
H SL S NFN F FL C ++ + FF + P +S F
Sbjct: 43 HKSLNVSPQNFNTPISFQQQLSMFLHNCKTGNITAIQAFQFFHLMMYSNPTPPLSS--FT 100
Query: 79 RMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIMNDC 137
++ + K ++ + +M + D T I L L V + + + +
Sbjct: 101 HLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRR 160
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEA 196
G + ++K LC + +A L ++ + PN I YG L+KG C G++ A
Sbjct: 161 GYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIA 220
Query: 197 SKIWNLMTDEG------FEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS- 249
K+ M ++ F+P + +I+ K ++DEA +F+ M+V+ M +S
Sbjct: 221 LKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISY 280
Query: 250 -------------------------TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNL 284
T+ ++ID +CK GK+ +A +LE M +RGI + L
Sbjct: 281 TSLMWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLL 340
Query: 285 TLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREM 340
T +S+I G G L A ++ + +PD+ Y LI G + + EA +++ M
Sbjct: 341 TYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGM 400
Query: 341 IKRGCEPTMHTYIMLLQGHLGKRGRKG--------------PDPLVNFDTIFVG------ 380
++ G P + TY LL G L + G+ G P L + G
Sbjct: 401 LQVGKRPDVKTYGALLTG-LFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGC 459
Query: 381 ----------------------------GLVKAGKSLDAAKYVERVMNRGVEVPRFDYNK 412
GL KAGK A + E++ ++ YN
Sbjct: 460 LFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNI 519
Query: 413 FLHYYSNEEGVVMFEEVGKKLREVG 437
+H + VV + +K+ + G
Sbjct: 520 MIHEFCRGGQVVKANILFQKMEKNG 544
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 135/288 (46%), Gaps = 15/288 (5%)
Query: 64 QKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVR 122
Q QP N +TFN ++D++ K + + L+ M +R +V N T+ + V
Sbjct: 298 QGVQP----NVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVG 353
Query: 123 ELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYL---ILKLSEWIKPNEIA 179
+L F M GCE + ++ C+ V EA L +L++ + +P+
Sbjct: 354 DLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGK--RPDVKT 411
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
YG L+ G G + +A K++ +M G + + + K EAM++F ++
Sbjct: 412 YGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLK 471
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
+ L + + +ID +CK GK+ A+ + E++ + ++ D +T + +I+ G++
Sbjct: 472 SYNIK-LDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQV 530
Query: 300 REAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
+A + +++EK PD Y LI+G ++ + ++ M++R
Sbjct: 531 VKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQR 578
>gi|297832366|ref|XP_002884065.1| hypothetical protein ARALYDRAFT_343373 [Arabidopsis lyrata subsp.
lyrata]
gi|297329905|gb|EFH60324.1| hypothetical protein ARALYDRAFT_343373 [Arabidopsis lyrata subsp.
lyrata]
Length = 1056
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 145/298 (48%), Gaps = 12/298 (4%)
Query: 68 PCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV--NDKTFKIALMTLAEVRELK 125
P F H+ T+ + + R D ++ L EM + +D F + R K
Sbjct: 58 PGFIHSRSTYRALFYKLCVFRRFDTVYQLLDEMPESTGLPPDDAIFVTIIRGFGRARLTK 117
Query: 126 KMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLI 184
++++ +++ G + SL++ N ++ L + + + ++ K+ + I+ +E YG L+
Sbjct: 118 RVISVVDLVSKFGIKPSLKVFNSILDVLVKEDIDIAREFFRRKMMASGIQGDEYTYGILM 177
Query: 185 KGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD 244
KG C + + K+ +M G P+ V + ++ K K A + M +K +
Sbjct: 178 KGLCLTNRIGDGFKLLQIMKTCGVAPNTVVYNTLLHALCKNGKVGRARSL--MSEMKEPN 235
Query: 245 DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK 304
D+ T+ I+I C K+ Q+ +LE+ F G+ D +T++ ++ L GR+ EA +
Sbjct: 236 DV---TFNILISAYCNEQKLIQSMVLLEKCFSLGLVPDVVTVTKVMEVLCNEGRVSEALE 292
Query: 305 VVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
V+E +E K D+ + L+KG + + R A + F+EM ++G P + TY +L+ G
Sbjct: 293 VLERVESKGGKVDVVACNTLVKGYCAVGKMRVAQRFFQEMERKGYLPNVETYNLLIAG 350
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/399 (20%), Positives = 153/399 (38%), Gaps = 72/399 (18%)
Query: 60 FQYTQKAQPC-FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTL 118
F+ Q + C A N++ +N ++ + K+ + + EM + ND TF I +
Sbjct: 190 FKLLQIMKTCGVAPNTVVYNTLLHALCKNGKVGRARSLMSEM---KEPNDVTFNILISAY 246
Query: 119 AEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNE 177
++L + + G + + KV++ LC V EA ++ ++ S+ K +
Sbjct: 247 CNEQKLIQSMVLLEKCFSLGLVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDV 306
Query: 178 IAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQM 237
+A L+KGYC VG + A + + M +G+ P+++ + +I F + D A+ F
Sbjct: 307 VACNTLVKGYCAVGKMRVAQRFFQEMERKGYLPNVETYNLLIAGFCDVGMLDSALDTFND 366
Query: 238 MRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFK----RGIEADNLTLSSIIYGL 293
M+ + +T+ +I + RG+ +LE M G D +S+IYG
Sbjct: 367 MKTDAI-RWNFATFNTLIRGLSVRGRTDDGIKILELMQDSETVHGARID--PYNSVIYGF 423
Query: 294 LARGRLREAYKVVEEIEK-------------------------------------PDISL 316
R +A + + ++EK P + +
Sbjct: 424 YKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDVKTAYDQMTGEGGVPSVIV 483
Query: 317 YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDT 376
H LI + E ++ +M+ RG P T F+
Sbjct: 484 SHCLIHRYSQEGYMEETLELINDMVTRGYLPRSST----------------------FNA 521
Query: 377 IFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
+ + G K K ++ K+VE + RG R YN L
Sbjct: 522 VII-GFCKEDKVMNGIKFVEDMAERGCVPDRESYNPLLE 559
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 56/282 (19%), Positives = 113/282 (40%), Gaps = 51/282 (18%)
Query: 84 IGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSL 143
+GK R F++ ++ G L N +T+ + + +V L ++ F+ M ++
Sbjct: 319 VGKMRVAQRFFQEMERKGY--LPNVETYNLLIAGFCDVGMLDSALDTFNDMKTDAIRWNF 376
Query: 144 EMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGY---------------- 187
N +++ L R + +K+ E ++ +E +G I Y
Sbjct: 377 ATFNTLIRGLSVRGRTDDG----IKILELMQDSETVHGARIDPYNSVIYGFYKENRWEDA 432
Query: 188 ------------------------CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFF 223
C+ G + + ++ MT EG PS+ V +I +
Sbjct: 433 LEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDVKTAYDQMTGEGGVPSVIVSHCLIHRYS 492
Query: 224 KINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADN 283
+ +E +++ M V R ST+ VI CK K+ +E+M +RG D
Sbjct: 493 QEGYMEETLELINDM-VTRGYLPRSSTFNAVIIGFCKEDKVMNGIKFVEDMAERGCVPDR 551
Query: 284 LTLSSIIYGLLARGRLREAYKV----VEEIEKPDISLYHGLI 321
+ + ++ L +G +++A+ + VE+ PD S++ L+
Sbjct: 552 ESYNPLLEELCVKGDIQKAWLLLSLMVEKSIVPDSSMWSSLM 593
>gi|147828617|emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]
Length = 477
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 145/320 (45%), Gaps = 24/320 (7%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
+ K++ L +LK + F+ M + G S+ LN ++K LC+ ++A I
Sbjct: 119 SQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAALRI 178
Query: 167 LK--LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFK 224
+ + P+ YG LI G C +G + EA +++ M + P++ +I +
Sbjct: 179 FREMPNRGCPPHSYTYGTLIXGLCRLGKIGEAKELFKEMETKACSPTVVTYXSLIHGLCQ 238
Query: 225 INKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNL 284
D A+++ + M K + + TY ++D CK G S+A +L+ M R + +
Sbjct: 239 SKDLDSAIRLLEEMASKGIKP-NVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMI 297
Query: 285 TLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREM 340
T S++++GL G+L+EA ++++ ++ +PD LY +I G + + EA EM
Sbjct: 298 TYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEM 357
Query: 341 IKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMN 400
+ G P T+ + ++ H I V GL + Y+ +
Sbjct: 358 VLGGISPNRLTWSLHVRIH----------------NIVVQGLCTEHPNRAFQLYLS-MRT 400
Query: 401 RGVEVPRFDYNKFLHYYSNE 420
RG+ + ++ ++Y+ N+
Sbjct: 401 RGISIDAKTFDSLVNYFCNK 420
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 77/174 (44%), Gaps = 11/174 (6%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
PN I Y L+ G C G L EA +I + M +G P + K+I F I K EA
Sbjct: 294 PNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANF 353
Query: 235 FQMMRVKRMD------DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
M + + L + + IV+ +C ++A+ + M RGI D T S
Sbjct: 354 LDEMVLGGISPNRLTWSLHVRIHNIVVQGLCTEHP-NRAFQLYLSMRTRGISIDAKTFDS 412
Query: 289 IIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFR 338
++ +G L +A +V+E+ PD ++ ++ R+ RE+ ++ +
Sbjct: 413 LVNYFCNKGDLHKAAHLVDEMVLDGCIPDEXTWNAVVCAFWDRRKVRESAELVQ 466
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/248 (19%), Positives = 116/248 (46%), Gaps = 23/248 (9%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALM--------TLAEVRELKK 126
+T+ ++ + +S+++D L+EM + + + +LM + + L
Sbjct: 227 VTYXSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDM 286
Query: 127 MVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIK 185
MV+ H+ N + + +V LC+ + EA ++ ++ + ++P+ YG +I
Sbjct: 287 MVSRRHLPN-------MITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIIS 339
Query: 186 GYCDVGDLIEASKIWNLMTDEGFEP-----SIDV-VDKMIETFFKINKDDEAMKVFQMMR 239
G+CD+ EA+ + M G P S+ V + ++ + A +++ MR
Sbjct: 340 GFCDICKFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLCTEHPNRAFQLYLSMR 399
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
+ + + T+ ++++ C +G + +A +++EM G D T ++++ R ++
Sbjct: 400 TRGIS-IDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEXTWNAVVCAFWDRRKV 458
Query: 300 REAYKVVE 307
RE+ ++V+
Sbjct: 459 RESAELVQ 466
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 17/157 (10%)
Query: 275 FKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI--EKPDIS--LYHGLIKGLLRLRRA 330
+ G + T S +I L++ R A +++ + EK +I+ ++ + + R+ +
Sbjct: 42 YTNGFRHSHQTFSLMISRLVSANHFRLAEELLCRMKEEKCNITEDIFLSICRAYGRVHKP 101
Query: 331 REATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK------------GPDPLVNFDTIF 378
+A +VFR+M + CEP+ +YI + +G+ K G P V +
Sbjct: 102 LDAVRVFRKMKEYECEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNVL 161
Query: 379 VGGLVKAGKSLDAAKYVERVM-NRGVEVPRFDYNKFL 414
+ L K ++DAA + R M NRG + Y +
Sbjct: 162 IKALCKNSGTMDAALRIFREMPNRGCPPHSYTYGTLI 198
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 177/409 (43%), Gaps = 30/409 (7%)
Query: 66 AQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVREL 124
+P F FN +VD+ FW+ M + R++ ++ L L++ +
Sbjct: 177 CRPGFGVFDTLFNVLVDLGMLEEARQCFWK----MNKFRVLPKVRSCNELLHRLSKSSKG 232
Query: 125 KKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWL 183
++FF M G S+ N V+ L + + A+ L ++ ++ ++P+ + Y L
Sbjct: 233 GLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSL 292
Query: 184 IKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM 243
I GY VG L A ++ M D G EP + + +I F K + +A + M+ + +
Sbjct: 293 IDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGL 352
Query: 244 DDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
+ TY +ID CK G + +A +M + G++ + T +S+I G L EA+
Sbjct: 353 QP-NVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAF 411
Query: 304 KVVEEIEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
K+ E+++ ++L Y L+ GL R REA ++F ++K G Y L G+
Sbjct: 412 KLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGY 471
Query: 360 L-GKRGRKGPDPL-------VNFDTIFVG----GLVKAGKSLDAAKYVERVMNRGVEVPR 407
+ K K D L + D + G GL + + D+ + +M+ G+
Sbjct: 472 IKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANS 531
Query: 408 FDYNKFLHYY----SNEEGVVMFEE---VGKKLREVGLADLADIFQRYG 449
+ Y + Y E V + +E +G K+ V L D + G
Sbjct: 532 YIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIG 580
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 95/435 (21%), Positives = 183/435 (42%), Gaps = 61/435 (14%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHIM 134
T+N ++ + + +++ +EM + L D T+ + +V L V+ F M
Sbjct: 253 TYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEM 312
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDVGDL 193
D GCE + N ++ C+ + + +A +YL ++PN + Y LI +C G L
Sbjct: 313 KDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGML 372
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
+EA+K + M G +P+ +I+ KI +EA K+ M+ ++ L + TY
Sbjct: 373 LEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVN-LNIVTYTA 431
Query: 254 VIDWMCKRGKISQA------------------YT-----------------MLEEMFKRG 278
++D +C+ G++ +A YT +LEEM K+
Sbjct: 432 LLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKN 491
Query: 279 IEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDIS----LYHGLIKGLLRLRRAREAT 334
++ D L + I+GL + + ++ V+ E+ ++ +Y LI ++ + EA
Sbjct: 492 LKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAV 551
Query: 335 QVFREMIKRGCEPTMHTYIMLLQG------------HLGKRGRKGPDPLVNFDTIFVGGL 382
+ +EM G + T+ TY +L+ G + R G P + T + GL
Sbjct: 552 NLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGL 611
Query: 383 VKAGKSLDAAKYVERVMNRGVEVPRFDYNKF----LHYYSNEEGVVM---FEEVGKKLRE 435
K +A ++++G+ + Y + + + E + + E+G +L
Sbjct: 612 CKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDL 671
Query: 436 VGLADLADIFQRYGK 450
L F RYG+
Sbjct: 672 CAYTSLIWGFSRYGQ 686
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 138/296 (46%), Gaps = 15/296 (5%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
N T+ ++D K +++ ++ EM + + +N T+ L L E +++ F
Sbjct: 390 NEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELF 449
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDV 190
+ G + ++ + + K++ +A ++ ++++ +KP+ + YG I G C
Sbjct: 450 GALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQ 509
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS- 249
++ ++ + M D G + + +I+ +FK+ K EA+ + Q M DLG+
Sbjct: 510 NEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQ-----EMQDLGIKI 564
Query: 250 ---TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
TY ++ID +CK G + QA + M + G++ + + +++I GL L EA +
Sbjct: 565 TVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLF 624
Query: 307 EEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
E+ PD +Y LI G ++ EA + M++ G E + Y L+ G
Sbjct: 625 NEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWG 680
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 140/333 (42%), Gaps = 41/333 (12%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHI 133
IT+N +++ K I +E L M +R L N T+ + + L + FF
Sbjct: 322 ITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVD 381
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M G + + ++ C+ + EA L ++ + + N + Y L+ G C+ G
Sbjct: 382 MIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGR 441
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR------------- 239
+ EA +++ + G+ + + + + K ++AM + + M
Sbjct: 442 MREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGT 501
Query: 240 -----------------VKRMDDLGLST----YRIVIDWMCKRGKISQAYTMLEEMFKRG 278
++ M D GL+ Y +ID K GK ++A +L+EM G
Sbjct: 502 KIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLG 561
Query: 279 IEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREAT 334
I+ +T +I GL G +++A + + + + P+I +Y LI GL + EA
Sbjct: 562 IKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAK 621
Query: 335 QVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKG 367
+F EM+ +G P Y L+ G++ K G G
Sbjct: 622 NLFNEMLDKGISPDKLVYTSLIDGNM-KHGNPG 653
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 124/265 (46%), Gaps = 7/265 (2%)
Query: 86 KSRNIDLFWETLQEMGRRRLVNDKT-FKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLE 144
K++ ++ + L+EM ++ L D + + L E++ + M DCG +
Sbjct: 473 KAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSY 532
Query: 145 MLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLM 203
+ ++ + EA L+ ++ + IK + YG LI G C +G + +A + ++ M
Sbjct: 533 IYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHM 592
Query: 204 TDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGK 263
T G +P+I + +I+ K + +EA +F M K + L Y +ID K G
Sbjct: 593 TRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKL-VYTSLIDGNMKHGN 651
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHG 319
+A ++ M + G+E D +S+I+G G+++ A +++E+ + PD L
Sbjct: 652 PGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCIC 711
Query: 320 LIKGLLRLRRAREATQVFREMIKRG 344
L++ L EA + +M +RG
Sbjct: 712 LLRKYYELGDINEALALHDDMARRG 736
>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
[Arabidopsis thaliana]
gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 124/264 (46%), Gaps = 29/264 (10%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
L + +KPN I+Y LI G C+ G + EA + + M G +P++ + +I F K +
Sbjct: 323 LDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDML 382
Query: 229 DEAMKVFQMMR------VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEAD 282
EA+ +F ++ RM Y ++ID CK GKI + + EEM + GI D
Sbjct: 383 KEALDMFGSVKGQGAVPTTRM-------YNMLIDAYCKLGKIDDGFALKEEMEREGIVPD 435
Query: 283 NLTLSSIIYGLLARGRLREAYKVVEEIEK---PDISLYHGLIKGLLRLRRAREATQVFRE 339
T + +I GL G + A K+ +++ PD+ +H L++G R +R+A + +E
Sbjct: 436 VGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKE 495
Query: 340 MIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPL-------------VNFDTIFVGGLVKAG 386
M K G +P TY ++++G+ + K + V + + G + G
Sbjct: 496 MSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKG 555
Query: 387 KSLDAAKYVERVMNRGVEVPRFDY 410
K DA + ++ +G+ R Y
Sbjct: 556 KLEDANMLLNEMLEKGLVPNRITY 579
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 116/249 (46%), Gaps = 18/249 (7%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
I+PN + +I C G + +A + M G P++ + +I+ + K+ + +
Sbjct: 219 IQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMY 278
Query: 233 KVFQMMRVKRMDDLG--LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
K +++ +D+ L+T+ I+ID K + + + +EM + ++ + ++ +S+I
Sbjct: 279 KADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLI 338
Query: 291 YGLLARGRLREAY----KVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
GL G++ EA K+V +P++ Y+ LI G + +EA +F + +G
Sbjct: 339 NGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAV 398
Query: 347 PTMHTYIMLLQGH--LGK----------RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKY 394
PT Y ML+ + LGK R+G P V + GL + G A K
Sbjct: 399 PTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKL 458
Query: 395 VERVMNRGV 403
+++ ++G+
Sbjct: 459 FDQLTSKGL 467
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 112/234 (47%), Gaps = 35/234 (14%)
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQ 266
G++ S ++ K N+ + V++ M ++R + T+ +VI+ +CK GK+++
Sbjct: 183 GYKLSALSCKPLMIALLKENRSADVEYVYKEM-IRRKIQPNVFTFNVVINALCKTGKMNK 241
Query: 267 AYTMLEEMFKRGIEADNLTLSSIIYG---LLARGRLREAYKVVEEIEK----PDISLYHG 319
A ++E+M G + ++ +++I G L G++ +A V++E+ + P+++ ++
Sbjct: 242 ARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNI 301
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFV 379
LI G + + +VF+EM+ + +P + +Y + L+N
Sbjct: 302 LIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISY----------------NSLIN------ 339
Query: 380 GGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN----EEGVVMFEEV 429
GL GK +A +++++ GV+ YN ++ + +E + MF V
Sbjct: 340 -GLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSV 392
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 70/139 (50%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDE 206
N ++ LC+ + AK L +L+ P+ + + L++GYC G+ +A+ + M+
Sbjct: 440 NCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKM 499
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQ 266
G +P + +++ + K A + M +R + +++Y +++ ++GK+
Sbjct: 500 GLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLED 559
Query: 267 AYTMLEEMFKRGIEADNLT 285
A +L EM ++G+ + +T
Sbjct: 560 ANMLLNEMLEKGLVPNRIT 578
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 143/330 (43%), Gaps = 40/330 (12%)
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIA 179
VR LKKM+ +++ N ++ C+ V E L ++ + I+P+
Sbjct: 578 VRLLKKMLERGFVLDKI-------TYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFT 630
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
Y LI G C +G L EA +WN P++ MI+ + K +K +E K+F +
Sbjct: 631 YNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELL 690
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
+ ++ L Y +I C+ G +A+ + ++M +GI T SS+I+G+ GR+
Sbjct: 691 TQNLE-LNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRM 749
Query: 300 REAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
+A +++E+ K P++ Y LI G +L + + V +EM P TY
Sbjct: 750 EDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITY--- 806
Query: 356 LQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
T+ + G K+G AAK + ++ +G+ YN +
Sbjct: 807 --------------------TVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTN 846
Query: 416 YYSNEEGVVMFEEVGKKLREVGLADLADIF 445
+ E + E GK L E G+ + +F
Sbjct: 847 GFCKEGKI----EEGKLLAEDGVGFNSPLF 872
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 166/367 (45%), Gaps = 57/367 (15%)
Query: 125 KKMVNFFHIMND-CGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKP-------- 175
K +NFF+ +D CG ++L ++++L V A+ L+++L + P
Sbjct: 160 KTALNFFYFASDSCGFRFTLRSYCVLMRSLIVSGFVSPARLLLIRLIDRKLPVLFGDPKN 219
Query: 176 ------------NEI--------AYGWLIKGYC----DVGDLIEASKIWNLMTDEGFEPS 211
NE+ A LI YC +VG A ++ + ++G P+
Sbjct: 220 RHIEIASAMADLNEVGESGVAVAAVDLLIHVYCTQFRNVG-FRNAIGVFRFLANKGVFPT 278
Query: 212 IDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTML 271
+ ++ + K N+ +++ VF+ MR D+ L + I+ CK GK+ A +
Sbjct: 279 VKTCTFLLSSLVKANELEKSYWVFETMRQGVSPDVYL--FSTAINAFCKGGKVEDAIQLF 336
Query: 272 EEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDIS----LYHGLIKGLLRL 327
+M K G+ + +T +++I+GL G L EA++ E++ K ++ Y LI GL++L
Sbjct: 337 FDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKL 396
Query: 328 RRAREATQVFREMIKRGCEPTMHTYIMLLQGH--LGKRG----------RKGPDP-LVNF 374
+ EA V +E +++G P Y L+ G+ +G G KG +P V
Sbjct: 397 EKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTL 456
Query: 375 DTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLR 434
++I + G K G+ A +E +++RG + + +H+ FE + LR
Sbjct: 457 NSI-IQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNS---RFESALRFLR 512
Query: 435 EVGLADL 441
E+ L ++
Sbjct: 513 EMLLRNM 519
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 144/323 (44%), Gaps = 27/323 (8%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
L + PNE+ Y LI GYC +G+L +A +I M +G P+ ++ +I+ F KI +
Sbjct: 410 LEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQM 469
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
++A + + M + R + + +I W+C + A L EM R + ++ L++
Sbjct: 470 EQAECILEEM-LSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTT 528
Query: 289 IIYGLLARGRLREA----YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
++ GL G+ +A ++++E+ ++ + LI GL + +EA ++ ++M++RG
Sbjct: 529 LVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERG 588
Query: 345 CEPTMHTYIMLLQGHL------------GKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAA 392
TY L+ G G+ ++G +P + + G+ + GK +A
Sbjct: 589 FVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAV 648
Query: 393 KYVERVMNRGVEVPRFDYNKFLHYYSN----EEGVVMFEEVGKKLREVGLADLADIFQRY 448
+R + + Y + Y EEG +F E+ + E+ + + Y
Sbjct: 649 NLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAY 708
Query: 449 GKKMATRER------RRNRAIEP 465
+ T E R++ I P
Sbjct: 709 CRNGNTVEAFKLHDDMRSKGIPP 731
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/353 (20%), Positives = 149/353 (42%), Gaps = 21/353 (5%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMV 128
F N + +N ++D K N+ +M + + N T + ++ ++++
Sbjct: 414 FTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAE 473
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGY 187
M G + ++ LC A ++L L ++PN+ L+ G
Sbjct: 474 CILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGL 533
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C G +A ++W + ++GF ++ + +I K EA+++ + M ++R L
Sbjct: 534 CKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKM-LERGFVLD 592
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
TY +I CK GK+ + + + EM K+GIE D T + +I+G+ G+L EA +
Sbjct: 593 KITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWN 652
Query: 308 EIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
E + P++ Y +I G + + E ++F E++ + E Y L++ + +
Sbjct: 653 ECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYC-RN 711
Query: 364 GR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
G KG P + + G+ G+ DA ++ + G+
Sbjct: 712 GNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGL 764
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 140/309 (45%), Gaps = 10/309 (3%)
Query: 56 VYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIA 114
V L+F+ +K F N +T N ++ + K+ N+ L++M R V DK T+
Sbjct: 543 VELWFRLLEKG---FGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTL 599
Query: 115 LMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWI 173
+ + ++++ M G E N ++ +C+ + EA L + S +
Sbjct: 600 ISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDL 659
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
PN YG +I GYC + E K++ + + E + V + +I + + EA K
Sbjct: 660 VPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFK 719
Query: 234 VFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
+ MR K + +TY +I MC G++ A +++EM K G+ + + +++I G
Sbjct: 720 LHDDMRSKGIPPT-TATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGY 778
Query: 294 LARGRLREAYKVVEEIEKPDIS----LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
G++ + V++E+ DI Y +I G + + A ++ EM+ +G P
Sbjct: 779 CKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDT 838
Query: 350 HTYIMLLQG 358
TY +L G
Sbjct: 839 VTYNVLTNG 847
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 108/238 (45%), Gaps = 3/238 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
++ T+N ++ + + +D E R LV N T+ + + + ++++ F
Sbjct: 627 DTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLF 686
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
+ E + + N +++ C+ VEA L + S+ I P Y LI G C++
Sbjct: 687 TELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNI 746
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G + +A + + M EG P++ +I + K+ + D+ + V Q M + + T
Sbjct: 747 GRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKI-T 805
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
Y ++ID K G + A +L EM +GI D +T + + G G++ E + E+
Sbjct: 806 YTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGKLLAED 863
>gi|238480176|ref|NP_001154199.1| uncharacterized protein [Arabidopsis thaliana]
gi|223635643|sp|Q8LDU5.2|PP298_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g01400, mitochondrial; Flags: Precursor
gi|332656621|gb|AEE82021.1| uncharacterized protein [Arabidopsis thaliana]
Length = 466
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 96/432 (22%), Positives = 180/432 (41%), Gaps = 68/432 (15%)
Query: 60 FQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETL-QEMGRRRLVNDKTFKIALMTL 118
F Y + QP F H+ + ++ +G+ R +L + L + + + F +
Sbjct: 71 FDYASQ-QPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVY 129
Query: 119 AEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS--EWIKPN 176
AE + +K+++ F+ M + + LN+++ L + ++ + + K S + PN
Sbjct: 130 AEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPN 189
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
+Y L++ +C DL A +++ M + P +D
Sbjct: 190 TRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVD----------------------- 226
Query: 237 MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR 296
+Y+I+I C++G+++ A +L++M +G D L+ ++++ L +
Sbjct: 227 -------------SYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRK 273
Query: 297 GRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
+LREAYK++ ++ PD+ Y+ +I G R RA +A +V +M+ GC P +Y
Sbjct: 274 TQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSY 333
Query: 353 IMLLQG------------HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMN 400
L+ G +L + KG P + V G GK +A VE VM
Sbjct: 334 RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMK 393
Query: 401 RGVEVPRFDYNKFLHYYSNE---EGVVMFEEVGKKLREVGLADLADIFQRYG-------- 449
G + + + NE E + +F E K G + D+ G
Sbjct: 394 NGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEITGDTRIVDVGIGLGSYLSSKLQ 453
Query: 450 -KKMATRERRRN 460
K+ RERRR+
Sbjct: 454 MKRKNARERRRH 465
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 160/362 (44%), Gaps = 35/362 (9%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALMTLAEVRELKKMVN 129
A N T+N +V + ++ + +M G N T+ + EL
Sbjct: 7 APNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAER 66
Query: 130 FFHIMNDCG-CEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGY 187
+M + G + +L N +V LC+ + A+ + ++ E + P+ ++Y L+ GY
Sbjct: 67 VVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGY 126
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK--RMDD 245
C VG L E+ +++ MT G P + +I K ++A+ + MR + RM++
Sbjct: 127 CKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNE 186
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
+ T+ +ID CK+G + A +EEM K GI+ + +++I G GR+ A ++
Sbjct: 187 V---TFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAREL 243
Query: 306 VEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG 361
+ E+E KPD+ Y +I G ++ A Q+ ++M+K+G P TY L++
Sbjct: 244 IREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIR---- 299
Query: 362 KRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEE 421
GL + + DA + E ++ GV+ F Y + + E
Sbjct: 300 -------------------GLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEG 340
Query: 422 GV 423
V
Sbjct: 341 NV 342
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 148/327 (45%), Gaps = 33/327 (10%)
Query: 58 LFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALM 116
+F + TQ+ + +TF ++ K+ N++ + +M R L +N+ TF +
Sbjct: 138 VFSEMTQRG---LVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALID 194
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKP 175
+ L + M CG + S+ N ++ C+ + A+ LI ++ ++ +KP
Sbjct: 195 GFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKP 254
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
+ + Y +I GYC VG+L A ++ M +G P +I + + ++A ++F
Sbjct: 255 DVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELF 314
Query: 236 QMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
+ M LG+ TY +ID CK G + +A ++ +EM ++G+ D +T S +I
Sbjct: 315 E-----NMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLIN 369
Query: 292 GLLARGRLREA----YKVVEEIEKPDISLYH---------------GLIKGLLRLRRARE 332
GL R +EA +K+ E PD Y L+KG +E
Sbjct: 370 GLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKE 429
Query: 333 ATQVFREMIKRGCEPTMHTYIMLLQGH 359
A +V++ M+ R + Y +L+ GH
Sbjct: 430 ADKVYQSMLDRNWKLDGSVYSILIHGH 456
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 87/190 (45%), Gaps = 4/190 (2%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
+ PN Y L++ C G L EA + M G P+ + ++ F + + D A
Sbjct: 6 VAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAE 65
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
+V +MR + L T+ +++ +CK G++ A + +EM + G+ D ++ ++++ G
Sbjct: 66 RVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSG 125
Query: 293 LLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
G L E+ V E+ + PD+ + LI + +A + +M +RG
Sbjct: 126 YCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMN 185
Query: 349 MHTYIMLLQG 358
T+ L+ G
Sbjct: 186 EVTFTALIDG 195
>gi|357486943|ref|XP_003613759.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515094|gb|AES96717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 733
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 115/218 (52%), Gaps = 26/218 (11%)
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEP------SIDVVDKMIETFFKINK 227
P+ +Y L+ G+C +G L++A ++ ++M + G EP ++++++ MI +
Sbjct: 136 SPDVTSYTVLVDGFCRLGKLVDAIRVMDVMEENGVEPNEKSGEAVNLIEDMIAKDLVVGS 195
Query: 228 D---------------DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLE 272
+ ++A +V++M+ K G + W+CK+GK+ +A M +
Sbjct: 196 ELCCKVVDVLCEEGNVEKACEVWRMVSRKNCGLNGAVVVSTLTHWLCKKGKVLEARNMFD 255
Query: 273 EMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE-IEK---PDISLYHGLIKGLLRLR 328
E F +G+ A LT +++I GL G+L EA ++ +E +EK P+ Y+ LIKG ++R
Sbjct: 256 E-FGKGLVASLLTYNTLIAGLCEGGKLCEAARLWDEMVEKGVAPNAFTYNMLIKGFCKVR 314
Query: 329 RAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK 366
A+E +V EM++ C P TY +L+ G L G K
Sbjct: 315 NAKEGIRVLEEMLENRCFPNKSTYTILIDGILLSGGMK 352
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 77/148 (52%), Gaps = 3/148 (2%)
Query: 136 DCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIE 195
+CG ++ +++ + LC++ V+EA+ + + + + + + Y LI G C+ G L E
Sbjct: 225 NCGLNGAV-VVSTLTHWLCKKGKVLEARNMFDEFGKGLVASLLTYNTLIAGLCEGGKLCE 283
Query: 196 ASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVI 255
A+++W+ M ++G P+ + +I+ F K+ E ++V + M R STY I+I
Sbjct: 284 AARLWDEMVEKGVAPNAFTYNMLIKGFCKVRNAKEGIRVLEEMLENRCFP-NKSTYTILI 342
Query: 256 DWMCKRGKISQAYTMLEEM-FKRGIEAD 282
D + G + Q + + G++AD
Sbjct: 343 DGILLSGGMKQEINKVVSLAMSTGVDAD 370
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 119/268 (44%), Gaps = 37/268 (13%)
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
L+K C ++ A K+ + M G P++ ++ F D AMKVF+ + + R
Sbjct: 75 LLKALCKGNEVEVAVKVLDEMPGMGLVPNVVSYTTVLGGFVWRGDMDGAMKVFREV-LDR 133
Query: 243 MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
+++Y +++D C+ GK+ A +++ M + G+E + + EA
Sbjct: 134 GWSPDVTSYTVLVDGFCRLGKLVDAIRVMDVMEENGVEPNE--------------KSGEA 179
Query: 303 YKVVEEIEKPDI----SLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
++E++ D+ L ++ L +A +V+R + ++ C + L
Sbjct: 180 VNLIEDMIAKDLVVGSELCCKVVDVLCEEGNVEKACEVWRMVSRKNCGLNGAVVVSTLTH 239
Query: 359 HLGKRGR------------KG-PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEV 405
L K+G+ KG L+ ++T+ + GL + GK +AA+ + ++ +GV
Sbjct: 240 WLCKKGKVLEARNMFDEFGKGLVASLLTYNTL-IAGLCEGGKLCEAARLWDEMVEKGVAP 298
Query: 406 PRFDYN----KFLHYYSNEEGVVMFEEV 429
F YN F + +EG+ + EE+
Sbjct: 299 NAFTYNMLIKGFCKVRNAKEGIRVLEEM 326
>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
Length = 783
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 168/369 (45%), Gaps = 53/369 (14%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
N +F I + ++K +++ + M++ GC N ++ L +R+L+ EA+ L+
Sbjct: 212 NTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLL 271
Query: 167 LKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI 225
L + S+ + PN+ Y L+ GYC +G L EA+K+ +MT P++ + ++ F
Sbjct: 272 LDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCND 331
Query: 226 NKDDEAMKVFQMMR------------------------------VKRMDDLGLS----TY 251
K DEA ++ M ++ MD G+ TY
Sbjct: 332 GKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTY 391
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE- 310
I++ WMCK+G +++A T L++M + G+ D +T +++I G++ +A+++++E+
Sbjct: 392 NIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTS 451
Query: 311 ---KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL----GKR 363
K D + ++ L ++ EA + KRG +Y +L+ G+ G R
Sbjct: 452 KGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDR 511
Query: 364 G---------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
R+ + ++++ +GGL ++ K A + ++ G+ YN +
Sbjct: 512 ALNLWDEMKERQIMPSTITYNSV-IGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIII 570
Query: 415 HYYSNEEGV 423
H + E V
Sbjct: 571 HGFCLEGNV 579
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 145/320 (45%), Gaps = 36/320 (11%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIM 134
T N ++ + + +D + L +R + D+ ++ I ++ + + + +N + M
Sbjct: 460 TLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEM 519
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIK----PNEIAYGWLIKGYCDV 190
+ S N V+ LCQ + V +A I KL+E ++ P+E Y +I G+C
Sbjct: 520 KERQIMPSTITYNSVIGGLCQSRKVDQA---IDKLNEMLENGLVPDETTYNIIIHGFCLE 576
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G++ +A + N M + F+P + + ++ + ++A+K+F + V + D+ + T
Sbjct: 577 GNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTL-VSKGKDIDVVT 635
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA----YKVV 306
Y +I +CK GK AY +L EM + + D T II L GR++EA K+V
Sbjct: 636 YNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMV 695
Query: 307 EE--IEKPDISL---------------------YHGLIKGLLRLRRAREATQVFREMIKR 343
E + ++ L Y I L + ++A +F E+ K
Sbjct: 696 ESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAMHLFVEVTKE 755
Query: 344 GCEPTMHTYIMLLQGHLGKR 363
G +TY+ L++G + +R
Sbjct: 756 GVALNKYTYLNLMEGLIKRR 775
>gi|357131182|ref|XP_003567219.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Brachypodium distachyon]
Length = 518
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 101/451 (22%), Positives = 171/451 (37%), Gaps = 88/451 (19%)
Query: 2 PVDPGHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQ 61
P D V + ++ +R + L C + + + SW
Sbjct: 63 PADVVRGVDAVVAAAEGSHADATRARTLLERCGAAASETLVVAALSRLRNSWA-AAHAAF 121
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEV 121
AQP +A + M+ I+ K R D L EM R+ L + + + +
Sbjct: 122 LWAAAQPDYAPGRHACHSMLAILAKHRRFDDARALLDEMRRKSLASPRAVLLLVRRYCAA 181
Query: 122 RELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYG 181
R++ + + FH + G E + + ++ LC+ K V +A++L+L + ++
Sbjct: 182 RDVTRAIAAFHALPSFGFEPGVAQFHGLLSALCRYKNVQDAEHLLLSSEKEFPFETKSFN 241
Query: 182 WLIKGYCD-VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
++ G+C+ V + EA + W M G E + MI F K D +K+F M+
Sbjct: 242 IVLNGWCNMVCSVREAKRFWTAMEVRGIERDVASYGSMISCFSKAGSLDSVLKLFNGMK- 300
Query: 241 KRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR-L 299
+ GI D ++++Y LA+GR +
Sbjct: 301 -----------------------------------EAGIVPDRKVYNAVVYA-LAKGRCV 324
Query: 300 REAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG----------- 344
EA +V +E+ PD + Y+ LI L + R+ +EATQ+F EMI RG
Sbjct: 325 DEAKALVRSMEERGTPPDTATYNSLIGPLCKARQVQEATQMFDEMIGRGLLASVRTFHAL 384
Query: 345 ---------------------CEPTMHTYIMLLQGHLGKRGR------------KGPDPL 371
CEP + TYIML++ R G +P
Sbjct: 385 FDVATSPSEVFDVLDKMKTLHCEPEIDTYIMLIRKFCRWRQHDSVEKLWSAMPTNGLNPD 444
Query: 372 VNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
+ + + GL GK +AAKY E + +G
Sbjct: 445 RSAYIVLIHGLFLNGKLEEAAKYYEEMKAKG 475
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 101/256 (39%), Gaps = 36/256 (14%)
Query: 74 SITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHI 133
+I N +++ R FW ++ G R V ++ + ++ L ++ F+
Sbjct: 241 NIVLNGWCNMVCSVREAKRFWTAMEVRGIERDV--ASYGSMISCFSKAGSLDSVLKLFNG 298
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIA-YGWLIKGYCDVGD 192
M + G ++ N VV L + + V EAK L+ + E P + A Y LI C
Sbjct: 299 MKEAGIVPDRKVYNAVVYALAKGRCVDEAKALVRSMEERGTPPDTATYNSLIGPLCKARQ 358
Query: 193 LIEASKIWNLMTDEGFEPSI-----------------DVVDKM---------------IE 220
+ EA+++++ M G S+ DV+DKM I
Sbjct: 359 VQEATQMFDEMIGRGLLASVRTFHALFDVATSPSEVFDVLDKMKTLHCEPEIDTYIMLIR 418
Query: 221 TFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIE 280
F + + D K++ M ++ S Y ++I + GK+ +A EEM +G
Sbjct: 419 KFCRWRQHDSVEKLWSAMPTNGLNP-DRSAYIVLIHGLFLNGKLEEAAKYYEEMKAKGFP 477
Query: 281 ADNLTLSSIIYGLLAR 296
+ T S I L R
Sbjct: 478 PEQKTESMIQAWLTGR 493
>gi|242095336|ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
gi|241916381|gb|EER89525.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
Length = 607
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 166/389 (42%), Gaps = 25/389 (6%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVN 129
A + TFN ++ +G++ N+ E M + D T+ I L L + + +
Sbjct: 128 APDVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGILLNRLCKAGLVGDALK 187
Query: 130 FFHIMNDCGCEYSLEM--LNKVVKTLCQRKLVVEAKYLI---LKLSEWIKPNEIAYGWLI 184
M+ G + ++ LN VV LC+ + +A + ++ PN + Y L
Sbjct: 188 VLDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERMRQVHGCAPNTVTYNCLA 247
Query: 185 KGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD 244
C VGD+ A +I M EG P++ ++ ++ ++ + A+ F+ R ++
Sbjct: 248 DACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLE 307
Query: 245 DLGLS-TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
G + TY ++ ++ A + EM +G D + ++I GL GRL +A
Sbjct: 308 ARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDAC 367
Query: 304 KVVEEIEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG- 358
+ ++K L Y+ LI G R +R EA Q+F EM G +P ++TY LL
Sbjct: 368 NIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCL 427
Query: 359 -----------HLGKRGRKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
LG G P +V F T+ V G KAGK+ +A K + ++
Sbjct: 428 CKAGDFSAVDELLGNMIDDGCQPSVVTFGTL-VHGYCKAGKTDEALKIFRSMGEARIQPN 486
Query: 407 RFDYNKFLHYYSNEEGVVMFEEVGKKLRE 435
YN + + V + ++ ++RE
Sbjct: 487 TVIYNTLIDFLCKSREVDVAIKLFDEMRE 515
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 114/241 (47%), Gaps = 3/241 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVNFF 131
N++T++ +V N+ L E EM + D +++ L + L N
Sbjct: 311 NAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACNIA 370
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
M G + + N ++ C++K + EA L ++ ++P+ Y L+ C
Sbjct: 371 ASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKA 430
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
GD ++ M D+G +PS+ ++ + K K DEA+K+F+ M R+
Sbjct: 431 GDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQP-NTVI 489
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y +ID++CK ++ A + +EM + + A+ T ++++ GL + +A++++++++
Sbjct: 490 YNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQMK 549
Query: 311 K 311
+
Sbjct: 550 E 550
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 128/296 (43%), Gaps = 9/296 (3%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVN 129
A N++T+N + D + +ID+ + ++ M + + N T + L V + ++
Sbjct: 237 APNTVTYNCLADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALD 296
Query: 130 FFHIMNDCGCEYSLEML--NKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKG 186
FF E + + +V V A L +++ + P+ + Y +I G
Sbjct: 297 FFREKRTTWLEARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISG 356
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
G L++A I M GF+ + +I F + + EA ++F+ M+ +
Sbjct: 357 LTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQP- 415
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
+ TY ++ +CK G S +L M G + +T ++++G G+ EA K+
Sbjct: 416 DVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIF 475
Query: 307 EEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+ +P+ +Y+ LI L + R A ++F EM + + TY LL+G
Sbjct: 476 RSMGEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKG 531
>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
Length = 933
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 90/388 (23%), Positives = 173/388 (44%), Gaps = 25/388 (6%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKT-FKIALMTLAEVRELKKMVNFF 131
+ + + ++D + K+ ++ ++ QE+ R ++ D + + + L + + K+ +
Sbjct: 518 DHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSIL 577
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI--LKLSEWIKPNEIAYGWLIKGYCD 189
M + G + N ++ + C++ +A L+ +K+S IKPN I Y L+ G
Sbjct: 578 TEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSS-IKPNLITYNTLVAGLFG 636
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ-MMRVKRMDDLGL 248
G + +A + N M GF PS ++++ + + D + + + MM D+
Sbjct: 637 TGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADI-- 694
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY----K 304
+ Y ++ +C G +A +LEEM GI D +T +++I G L A+ +
Sbjct: 695 TVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQ 754
Query: 305 VVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
++ + P+I+ ++ L+ GL + R EA V EM K G EP TY +L+ GH GK+
Sbjct: 755 MLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGH-GKQS 813
Query: 365 R-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
KG P V+ + KAG A + + + RGV Y+
Sbjct: 814 NKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYD 873
Query: 412 KFLHYYSNEEGVVMFEEVGKKLREVGLA 439
+ +S ++ K ++E G +
Sbjct: 874 ILVSGWSRIRNGTEVKKCLKDMKEKGFS 901
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 111/232 (47%), Gaps = 6/232 (2%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEAS 197
G + +N ++ LC+ V A L + + I + LI GYC VGD A
Sbjct: 130 GVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHALDVIGWNTLIAGYCRVGDTPAAL 189
Query: 198 KIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDW 257
+ + MT +G + + ++ F + + D A V MM+ +D ++TY I +
Sbjct: 190 SVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDP-NVATYTPFIVY 248
Query: 258 MCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PD 313
C+ + +A+ + E M + G+ D +TLS+++ GL GR EAY + E++K P+
Sbjct: 249 YCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPN 308
Query: 314 ISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
Y LI L + R +E + EM+ RG + TY L+ LGK+G+
Sbjct: 309 HVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMD-WLGKQGK 359
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 143/310 (46%), Gaps = 29/310 (9%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALM----TLAEVRELKKMV 128
N +T+ ++D + K+ L EM R +V D ALM + E+K +
Sbjct: 308 NHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTL 367
Query: 129 NFFHIMNDC--GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIK 185
F N G Y++ ++ LC+ V EA+ ++L++ E I PN + + +I
Sbjct: 368 RFALSDNLSLNGVTYTV-----LIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVIN 422
Query: 186 GYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD 245
G+ G L +A++ +M + G P++ +I+ FFK D A++V+ M +
Sbjct: 423 GFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCE---- 478
Query: 246 LGLSTYRIVIDWMC----KRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
G+ + ++D + + GKI +A + ++ G+ D++ +++I GL G +
Sbjct: 479 -GVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPT 537
Query: 302 AYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
A+K +E+ PD +Y+ I L L + +EA + EM G +P TY ++
Sbjct: 538 AFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIV 597
Query: 358 GHLGKRGRKG 367
H RKG
Sbjct: 598 SHC----RKG 603
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 127/298 (42%), Gaps = 48/298 (16%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
N +T+ ++D + K+ N+D + L EM +K+ ++T + V
Sbjct: 378 NGVTYTVLIDALCKAHNVDEAEQVLLEM------EEKSISPNVVTFSSV----------- 420
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDVG 191
+N VK R L+ +A +Y + I PN + YG LI G+
Sbjct: 421 -------------INGFVK----RGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQ 463
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS-- 249
A ++++ M EG E + +VD ++ + K +EAM +F K GLS
Sbjct: 464 GQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALF-----KDASGSGLSLD 518
Query: 250 --TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
Y +ID + K G + A+ +E+ R + D + + I L G+ +EA ++
Sbjct: 519 HVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILT 578
Query: 308 EIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG 361
E+ KPD S Y+ +I R +A ++ EM +P + TY L+ G G
Sbjct: 579 EMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFG 636
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 126/290 (43%), Gaps = 24/290 (8%)
Query: 146 LNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
L+ +V LC+ EA L ++ + PN + Y LI G E + M
Sbjct: 277 LSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMV 336
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS--TYRIVIDWMCKRG 262
G + +++ K K DE V +R D+L L+ TY ++ID +CK
Sbjct: 337 SRGVVMDLVTYTALMDWLGKQGKTDE---VKDTLRFALSDNLSLNGVTYTVLIDALCKAH 393
Query: 263 KISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA--YK--VVEEIEKPDISLYH 318
+ +A +L EM ++ I + +T SS+I G + RG L +A YK + E P++ Y
Sbjct: 394 NVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYG 453
Query: 319 GLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG---------RKGPD 369
LI G + + A +V+ +M+ G E L+ G L + G +
Sbjct: 454 TLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNG-LRQNGKIEEAMALFKDASG 512
Query: 370 PLVNFD----TIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
++ D T + GL KAG A K+ + +M+R + YN F++
Sbjct: 513 SGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFIN 562
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 141/334 (42%), Gaps = 39/334 (11%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N +V C+ V A+ ++ + E + PN Y I YC + EA ++ M
Sbjct: 208 NTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVR 267
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL----STYRIVIDWMCKR 261
G + + ++ + + EA +F + MD +G TY +ID + K
Sbjct: 268 NGVLLDVVTLSALVAGLCRDGRFSEAYALF-----REMDKVGAVPNHVTYCTLIDSLAKA 322
Query: 262 GKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISL----Y 317
G+ + ++L EM RG+ D +T ++++ L +G+ E + ++SL Y
Sbjct: 323 GRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTY 382
Query: 318 HGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG------------- 364
LI L + EA QV EM ++ P + T+ ++ G + KRG
Sbjct: 383 TVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFV-KRGLLDKATEYKRMMK 441
Query: 365 RKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYV-ERVMNRGVEVPRFDYNKFLHYYSN--- 419
+G +P +V + T+ G G+ DAA V ++ GVEV +F + ++
Sbjct: 442 ERGINPNVVTYGTLIDGFFKFQGQ--DAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGK 499
Query: 420 -EEGVVMFEEV---GKKLREVGLADLADIFQRYG 449
EE + +F++ G L V L D + G
Sbjct: 500 IEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAG 533
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 28/163 (17%)
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE---IEKPDISLYHGLI 321
+ A +L EM KRG+ D +T+++++ GL G++ A + + I D+ ++ LI
Sbjct: 117 AHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHALDVIGWNTLI 176
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGG 381
G R+ A V M +G P +V ++T+ V G
Sbjct: 177 AGYCRVGDTPAALSVADRMTAQGL----------------------PMDVVGYNTL-VAG 213
Query: 382 LVKAGKSLDAAKYVERVMNR-GVEVPRFDYNKFLHYYSNEEGV 423
+AG+ +DAA+ V +M GV+ Y F+ YY +GV
Sbjct: 214 FCRAGQ-VDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGV 255
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 54/279 (19%), Positives = 118/279 (42%), Gaps = 12/279 (4%)
Query: 36 NLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSIT-FNRMVDII---GKSRNID 91
+LTH LQ C+ R + + + H IT +N ++ ++ G +R
Sbjct: 659 SLTHRRVLQACSQ----SRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKAT 714
Query: 92 LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVK 151
+ E + +G + TF ++ + L + M ++ N ++
Sbjct: 715 VVLEEM--LGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLG 772
Query: 152 TLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEP 210
L + EA +++++ + ++PN + Y L+ G+ + +EA +++ M +GF P
Sbjct: 773 GLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVP 832
Query: 211 SIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTM 270
+ + +I F K +A ++F+ M+ KR TY I++ + ++
Sbjct: 833 KVSTYNALISDFTKAGMMTQAKELFKDMQ-KRGVHPTSCTYDILVSGWSRIRNGTEVKKC 891
Query: 271 LEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
L++M ++G TLS I G +A ++++ +
Sbjct: 892 LKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNL 930
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 105/448 (23%), Positives = 190/448 (42%), Gaps = 59/448 (13%)
Query: 14 ILYQQQYSPESRLHS--SLSSCNFN-LTHEFFLQICNNFPLSWRPVYLFFQYTQKAQ-PC 69
+L + +S S L++ SLSS L + L IC+ + L+ + P
Sbjct: 87 LLPKSPFSSPSHLYTLFSLSSTPMKPLFSDMLLSICSESKMVSESAELYMLMKKDGVLPS 146
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
A ++ +V + LF E + E G R + + A+ ++ +LK+ +
Sbjct: 147 VASLNLFLESLVSTKRYEDTLQLFSEIV-ESGLRP--DQFMYGKAIQAAVKLGDLKRAIE 203
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYC 188
M G + + N V+ LC+ K + +A+ L + L + PN I Y LI GYC
Sbjct: 204 LMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYC 263
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV-------- 240
VG L EA I M E EP+I + ++ + +EA +V + M V
Sbjct: 264 KVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRF 323
Query: 241 ------------KRMD-DLGLS-------------TYRIVIDWMCKRGKISQAYTMLEEM 274
+D + LS T I+++ +CK G + +A +L++
Sbjct: 324 TYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKF 383
Query: 275 FKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRA 330
+ G+ + ++I+ G G + +AY +E++E +P+ Y+ L+K ++
Sbjct: 384 LENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNM 443
Query: 331 REATQVFREMIKRGCEPTMHTYIMLLQGH------------LGKRGRKGPDPLVNFDTIF 378
EA + ++M+++G P + TY L+ G+ L + +KG P V
Sbjct: 444 EEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCL 503
Query: 379 VGGLVKAGKSLDAAKYVERVMNRGVEVP 406
+ L K L+A + +++RGV VP
Sbjct: 504 INCLCKDANILEAEVILGDMVHRGV-VP 530
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 141/336 (41%), Gaps = 43/336 (12%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVN--DKTFKIALMTLAEVRELKKM 127
F + T+ + D K N+D TL E R+ V D T I L L + ++K
Sbjct: 318 FVPDRFTYTTLFDGHLKCGNVDASI-TLSEEAVRKGVQILDYTCSILLNALCKEGNMEKA 376
Query: 128 VNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKG 186
+ G N +V CQ + +A I K+ ++PN + Y L+K
Sbjct: 377 EEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKK 436
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
+C++ ++ EA K M ++G P+++ + +I+ + + D ++ + M K +
Sbjct: 437 FCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPN 496
Query: 247 GLS----------------------------------TYRIVIDWMCKRGKISQAYTMLE 272
+S Y ++ID C GK+ A+ +
Sbjct: 497 VISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFD 556
Query: 273 EMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP----DISLYHGLIKGLLRLR 328
EM R I +T + +I GL +G++ EA + EI + D+ Y+ LI G
Sbjct: 557 EMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAG 616
Query: 329 RAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
++A +++ M K G +PT++TY L+ G GK G
Sbjct: 617 NVQKALELYETMKKSGIKPTLNTYHRLIAG-CGKEG 651
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/391 (21%), Positives = 171/391 (43%), Gaps = 54/391 (13%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKI------------ALMTLAEV 121
ITFN +++ + +++ ++ L+EM V D+ T+ A +TL+E
Sbjct: 288 ITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSE- 346
Query: 122 RELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAY 180
++K V +Y+ +L + LC+ + +A+ ++ K L + P + +
Sbjct: 347 EAVRKGVQIL--------DYTCSIL---LNALCKEGNMEKAEEVLKKFLENGLAPVGVFF 395
Query: 181 GWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
++ GYC VGD+ +A M G P+ + +++ F ++ +EA K + M V
Sbjct: 396 NTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKM-V 454
Query: 241 KRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
++ + TY +ID + + + +LEEM K+G++ + ++ +I L +
Sbjct: 455 EKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANIL 514
Query: 301 EAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
EA ++ ++ P+ +Y+ LI G + ++A + F EM+ R PT+ TY
Sbjct: 515 EAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTY---- 570
Query: 357 QGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHY 416
I + GL K GK ++A + +G+ YN +
Sbjct: 571 -------------------NILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISG 611
Query: 417 YSNEEGVVMFEEVGKKLREVGLADLADIFQR 447
YS+ V E+ + +++ G+ + + R
Sbjct: 612 YSSAGNVQKALELYETMKKSGIKPTLNTYHR 642
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 131/338 (38%), Gaps = 66/338 (19%)
Query: 115 LMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WI 173
L +E + + + + +M G S+ LN +++L K + L ++ E +
Sbjct: 119 LSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGL 178
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
+P++ YG I+ +GDL A ++ M G P
Sbjct: 179 RPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSP----------------------- 215
Query: 234 VFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
G+ Y +VI +CK ++ A + +EM R + + +T +++I G
Sbjct: 216 -------------GVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGY 262
Query: 294 LARGRLREAYKV-----VEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
G+L EA+ + VE +E P I ++ L+ GL R + EA +V EM G P
Sbjct: 263 CKVGQLEEAFNIRERMKVENVE-PTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPD 321
Query: 349 MHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRF 408
TY L GHL K G + E + +GV++ +
Sbjct: 322 RFTYTTLFDGHL-----------------------KCGNVDASITLSEEAVRKGVQILDY 358
Query: 409 DYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLADIFQ 446
+ L+ E + EEV KK E GLA + F
Sbjct: 359 TCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFN 396
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 143/304 (47%), Gaps = 19/304 (6%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
N I++ +++ + K NI L +M R +V N + + + + +LK FF
Sbjct: 496 NVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFF 555
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDV 190
M +L N ++ LC++ V+EA+ L +++ + + + I Y LI GY
Sbjct: 556 DEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSA 615
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM----KVFQ-MMRVKRMDD 245
G++ +A +++ M G +P+++ ++I K E + K++Q M+++ + D
Sbjct: 616 GNVQKALELYETMKKSGIKPTLNTYHRLIAGCGK-----EGLVLVEKIYQEMLQMNLVPD 670
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
+ Y +I + G + +A ++ M +GI+ D +T + +I G GR+ + +
Sbjct: 671 RVI--YNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNL 728
Query: 306 VEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG 361
V +++ P Y LI G +L+ A +REM + G P++ L+ G L
Sbjct: 729 VNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITG-LR 787
Query: 362 KRGR 365
+ GR
Sbjct: 788 EEGR 791
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 100/236 (42%), Gaps = 2/236 (0%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+T+N +++ + K + E+ R+ L D T+ + + ++K + +
Sbjct: 568 VTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYET 627
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDL 193
M G + +L ++++ + LV+ K L + P+ + Y LI Y + GD+
Sbjct: 628 MKKSGIKPTLNTYHRLIAGCGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDV 687
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
+A + + M +G +P + +I FK + + + M+++ + TY I
Sbjct: 688 QKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIP-KTETYDI 746
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
+I CK AY EMF+ G ++I GL GR +A + E+
Sbjct: 747 LIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITGLREEGRSHDADVICSEM 802
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 76/173 (43%), Gaps = 5/173 (2%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALM-TLAEVRELKKMVNFFHIM 134
T++R++ GK + L + QEM + LV D+ AL+ E +++K + M
Sbjct: 639 TYHRLIAGCGK-EGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAM 697
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI--LKLSEWIKPNEIAYGWLIKGYCDVGD 192
G + N ++ + + + K L+ +K+ I P Y LI G+C + D
Sbjct: 698 EAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLI-PKTETYDILIVGHCKLKD 756
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD 245
A + M + GF PS+ + D +I + + +A + M +K DD
Sbjct: 757 FDGAYVWYREMFENGFTPSVSICDNLITGLREEGRSHDADVICSEMNMKGKDD 809
>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
Length = 579
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 135/299 (45%), Gaps = 18/299 (6%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEA 196
GC+ L +LN + + + V + + + + + P+ +Y LI G G E
Sbjct: 257 GCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARET 316
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVID 256
S I++ M +GF + +++ F K K +A ++ + M+ K + ++TY ++D
Sbjct: 317 SNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPT-VATYGAIVD 375
Query: 257 WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----P 312
+ K ++ +AY + EE +GIE + + SS+I G GR+ EAY ++EE+ K P
Sbjct: 376 GLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTP 435
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG------------HL 360
++ ++ L+ L++ EA F+ M + C P +TY +L+ G
Sbjct: 436 NVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFW 495
Query: 361 GKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN 419
++G P V T + GL K G DA ER G +N + SN
Sbjct: 496 QDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSN 554
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 161/358 (44%), Gaps = 54/358 (15%)
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYC 188
FFH + G + ++ LC+ + EA+ L ++ +E P AY +I GY
Sbjct: 5 FFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYG 64
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
G +A K+ + + G PS+ + ++ K K DEA+ +F++M K+ +
Sbjct: 65 SAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM--KKDAEPNS 122
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEM---------------------------------- 274
STY I+ID +C G++ +AY +L+EM
Sbjct: 123 STYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFES 182
Query: 275 -FKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRR 329
+RG D +T S+I GL +G++ EAY++ E++ + +Y LI+ R
Sbjct: 183 ASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGR 242
Query: 330 AREATQVFREMIKRGCEPT---MHTYI-MLLQGHLGKRGRK--------GPDPLVNFDTI 377
+ ++F+E+I+RGC+P ++TY+ + + ++GR G P V +I
Sbjct: 243 KEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSI 302
Query: 378 FVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLRE 435
+ GL KAG++ + + + +G + YN + + V E+ ++++E
Sbjct: 303 LIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKE 360
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 145/341 (42%), Gaps = 44/341 (12%)
Query: 58 LFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALM 116
LF + A+P NS T+N ++D++ ++ + L EM L N T I +
Sbjct: 110 LFEVMKKDAEP----NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVD 165
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKP 175
L + R+L++ F + GC ++ L ++ V EA L K L
Sbjct: 166 RLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNA 225
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
N + Y LI+ + G + KI+ + G +P + +++ ++ FK + ++ +F
Sbjct: 226 NPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIF 285
Query: 236 QMMR------------------------------VKRMDDLGLS----TYRIVIDWMCKR 261
+ +R M G + Y V+D CK
Sbjct: 286 EDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKS 345
Query: 262 GKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDIS----LY 317
GK+ +AY +LEEM ++ ++ T +I+ GL RL EAY + EE + I LY
Sbjct: 346 GKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLY 405
Query: 318 HGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
LI G ++ R EA + EM+K+G P ++T+ LL
Sbjct: 406 SSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDA 446
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/377 (21%), Positives = 166/377 (44%), Gaps = 26/377 (6%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIM 134
++FN ++ +GK R +D + M + N T+ I + L +++ M
Sbjct: 89 VSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEM 148
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDL 193
+L +N +V LC+ + + EA + S+ P+ + Y LI G G +
Sbjct: 149 EHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQV 208
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
EA +++ M D G + V +I FF + ++ K+F+ + ++R L+
Sbjct: 209 DEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKEL-IRRGCKPDLTLLNT 267
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPD 313
+D + K G++ + + E++ G D + S +I+GL G+ RE + +++
Sbjct: 268 YMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQG 327
Query: 314 ISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR---- 365
+L Y+ ++ G + + +A ++ EM ++ +PT+ TY ++ G L K R
Sbjct: 328 FALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDG-LAKIDRLDEA 386
Query: 366 ---------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHY 416
KG + V + + G K G+ +A +E +M +G+ + +N L
Sbjct: 387 YMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLL-- 444
Query: 417 YSNEEGVVMFEEVGKKL 433
+ +V EE+ + L
Sbjct: 445 ----DALVKAEEINEAL 457
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 134/303 (44%), Gaps = 46/303 (15%)
Query: 77 FNRMVDIIGKSRNID---LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHI 133
N +D + K+ ++ + +E ++ G L + +++ I + L + + ++ N FH
Sbjct: 265 LNTYMDCVFKAGEVEKGRMIFEDIRSYGF--LPDVRSYSILIHGLTKAGQARETSNIFHA 322
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL------------------------ 169
M G N VV C+ V +A ++ ++
Sbjct: 323 MKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDR 382
Query: 170 ------------SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDK 217
S+ I+ N + Y LI G+ VG + EA I M +G P++ +
Sbjct: 383 LDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNS 442
Query: 218 MIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKR 277
+++ K + +EA+ FQ M+ + TY I+I+ +C+ K ++A+ ++M K+
Sbjct: 443 LLDALVKAEEINEALVCFQSMKEMKCPP-NTYTYSILINGLCRVQKYNKAFVFWQDMQKQ 501
Query: 278 GIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREA 333
G+ + +T +++I GL G + +AY + E + PD + ++ LI+G+ RA EA
Sbjct: 502 GLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEA 561
Query: 334 TQV 336
Q
Sbjct: 562 YQA 564
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 78/179 (43%), Gaps = 2/179 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
N + ++ ++D GK ID + L+EM ++ L N T+ L L + E+ + + F
Sbjct: 401 NVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCF 460
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDV 190
M + C + + ++ LC+ + +A + + + PN + Y +I G V
Sbjct: 461 QSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKV 520
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
G++ +A ++ G P + +IE N+ EA + + R+D L S
Sbjct: 521 GNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQAGWLDTTMRLDCLIFS 579
>gi|297807667|ref|XP_002871717.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317554|gb|EFH47976.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 533
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 133/264 (50%), Gaps = 34/264 (12%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
I+PNE+ YG +I+ C EA +++ M D F P + K+I+ + +K DEA
Sbjct: 290 IEPNEVTYGVMIRALCKEKKSGEARNMFDEMLDRSFMPDSSLCCKVIDALCEDHKVDEAC 349
Query: 233 KVF-QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
++ +M++ M D L + +I W+CK G++S+A + +E F +G LT +++I
Sbjct: 350 GLWRKMLKNNCMPDNALLS--TLIHWLCKEGRVSEARKLFDE-FDKGSIPSLLTYNTLIA 406
Query: 292 GLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
G+ +G L EA ++ +++ KP+ Y+ LI+GL + +E +V EM++ GC P
Sbjct: 407 GMCEKGELTEAGRLWDDMFERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLESGCFP 466
Query: 348 TMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPR 407
T+++L + GL K GK DA K V + G +V +
Sbjct: 467 NKTTFLILFE-----------------------GLQKLGKEEDAIKIVSMAVMNG-KVDK 502
Query: 408 FDYNKFLHYYSNE--EGVVMFEEV 429
+ FL+ + E +GV+ +E+
Sbjct: 503 ESWELFLNKFVGELDKGVLALKEL 526
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 171/396 (43%), Gaps = 29/396 (7%)
Query: 60 FQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL---VNDKTFKIALM 116
F Y K+ P F HN T++ ++ + ++R D + ++ + F L
Sbjct: 67 FLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLR 126
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQ--RKLVVEAKYLILKLSEWIK 174
+ + F + D G + S+ LN ++ L Q R +V A + K S I
Sbjct: 127 NYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGIT 186
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
PN L+K C D+ A K+ + + G P++ ++ + + A +V
Sbjct: 187 PNIFTCNLLVKALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMESAKRV 246
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
+ M + R TY +++D CK G+ S+A T++++M K IE + +T +I L
Sbjct: 247 LEEM-LDRGWYPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALC 305
Query: 295 ARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
+ EA + +E+ PD SL +I L + EA ++R+M+K C P +
Sbjct: 306 KEKKSGEARNMFDEMLDRSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPD-N 364
Query: 351 TYIMLLQGHLGKRGR------------KGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVER 397
+ L L K GR KG P L+ ++T+ + G+ + G+ +A + +
Sbjct: 365 ALLSTLIHWLCKEGRVSEARKLFDEFDKGSIPSLLTYNTL-IAGMCEKGELTEAGRLWDD 423
Query: 398 VMNRGVEVPRFDYNKFLHYYSN----EEGVVMFEEV 429
+ R + F YN + S +EGV + EE+
Sbjct: 424 MFERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEM 459
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 93/235 (39%), Gaps = 37/235 (15%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALM-TLAEVRELKKMVNFF 131
N +T+ M+ + K + EM R + D + ++ L E ++ + +
Sbjct: 293 NEVTYGVMIRALCKEKKSGEARNMFDEMLDRSFMPDSSLCCKVIDALCEDHKVDEACGLW 352
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVG 191
M C +L+ ++ LC+ V EA+ L + + P+ + Y LI G C+ G
Sbjct: 353 RKMLKNNCMPDNALLSTLIHWLCKEGRVSEARKLFDEFDKGSIPSLLTYNTLIAGMCEKG 412
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTY 251
+L EA ++W+ M + +P+ + +IE GLS
Sbjct: 413 ELTEAGRLWDDMFERKCKPNAFTYNVLIE--------------------------GLS-- 444
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
K G + + +LEEM + G + T + GL G+ +A K+V
Sbjct: 445 --------KNGNVKEGVRVLEEMLESGCFPNKTTFLILFEGLQKLGKEEDAIKIV 491
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 132/304 (43%), Gaps = 60/304 (19%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
+KP + Y LI GYCD G L A + M + G ++ + ++ F + EA
Sbjct: 140 VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAY 199
Query: 233 KVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
++ V+ M GL+ TY I+I+ CK G + +A + E M +RG+ A +T +S
Sbjct: 200 EL-----VEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTS 254
Query: 289 IIYGLLARGRLRE-----------------------------------AYKVVEEIEK-- 311
+IY L +G+++E A++++ E+EK
Sbjct: 255 LIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR 314
Query: 312 --PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG----- 364
PD Y+ L++GL L R EA ++ EM KRG +P + TY L+ G+ K
Sbjct: 315 IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDAL 374
Query: 365 -------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
KG +P + + GL K G+ DA V+ ++ G+ Y +
Sbjct: 375 RIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 434
Query: 418 SNEE 421
+ E+
Sbjct: 435 TTED 438
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 145/293 (49%), Gaps = 24/293 (8%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLSE--WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
N V+ C R V A ++ ++ E I PN+ YG +I G+C VG + EA K+++ M
Sbjct: 76 NTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEML 135
Query: 205 DEG-FEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGK 263
+G +P + + +I + K D A+ +++ V+R + ++TY +++ + G+
Sbjct: 136 TKGEVKPEAVMYNALIGGYCDQGKLDTAL-LYRDRMVERGVAMTVATYNLLVHALFMDGR 194
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHG 319
++AY ++EEM +G+ D T + +I G G +++A ++ E + + + Y
Sbjct: 195 GTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTS 254
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------------LG--KRGR 365
LI L + + +E ++F E ++RG P + Y L+ H +G ++ R
Sbjct: 255 LIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR 314
Query: 366 KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYS 418
PD V ++T+ GL G+ +A K ++ + RG++ YN + YS
Sbjct: 315 IAPDD-VTYNTLMR-GLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYS 365
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 117/233 (50%), Gaps = 7/233 (3%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLIEA 196
G ++ N +V L EA L+ ++ + + P+ Y LI G+C G++ +A
Sbjct: 174 GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKA 233
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVID 256
+I+ M+ G ++ +I K + E K+F V+R L Y +I+
Sbjct: 234 LEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEA-VRRGIRPDLVLYNALIN 292
Query: 257 WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----P 312
G I +A+ ++ EM K+ I D++T ++++ GL GR+ EA K+++E+ K P
Sbjct: 293 SHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQP 352
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
D+ Y+ LI G ++A ++ EM+ +G PT+ TY L+QG L K G+
Sbjct: 353 DLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQG-LCKNGQ 404
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 106/224 (47%), Gaps = 9/224 (4%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDE 206
N +++ LC A L L + +PN + Y +I G+C G + A I M +
Sbjct: 45 NIMLRHLCSAGKPARALEL---LRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRER 101
Query: 207 -GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKIS 265
G P+ +I + K+ + DEA+KVF M K Y +I C +GK+
Sbjct: 102 GGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLD 161
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLI 321
A + M +RG+ T + +++ L GR EAY++VEE+ PD+ Y+ LI
Sbjct: 162 TALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILI 221
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
G + ++A ++F M +RG T+ TY L+ L K+G+
Sbjct: 222 NGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYA-LSKKGQ 264
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 110/219 (50%), Gaps = 10/219 (4%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N ++ C+ V +A + +S ++ + Y LI G + E K+++
Sbjct: 218 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVR 277
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM--DDLGLSTYRIVIDWMCKRGK 263
G P + + + +I + D A ++ M KR+ DD+ TY ++ +C G+
Sbjct: 278 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV---TYNTLMRGLCLLGR 334
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHG 319
+ +A +++EM KRGI+ D +T +++I G +G +++A ++ E+ P + Y+
Sbjct: 335 VDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNA 394
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
LI+GL + + +A + +EM++ G P TYI L++G
Sbjct: 395 LIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEG 433
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 106/229 (46%), Gaps = 9/229 (3%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRR----RLVNDKTFKIALMTLAEVRELK 125
A + T+N +++ K N+ E + M RR +V + AL +V+E
Sbjct: 210 LAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETD 269
Query: 126 KMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLI 184
K+ F G L + N ++ + + A ++ ++ + I P+++ Y L+
Sbjct: 270 KL---FDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLM 326
Query: 185 KGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD 244
+G C +G + EA K+ + MT G +P + + +I + +A+++ M K +
Sbjct: 327 RGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFN 386
Query: 245 DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
L TY +I +CK G+ A M++EM + GI D+ T S+I GL
Sbjct: 387 PT-LLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 434
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 80/187 (42%), Gaps = 18/187 (9%)
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKR-GIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY VI C RG++ A ++ EM +R GI + T ++I G GR+ EA KV +E
Sbjct: 74 TYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDE 133
Query: 309 I-----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG----- 358
+ KP+ +Y+ LI G + A M++RG T+ TY +L+
Sbjct: 134 MLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDG 193
Query: 359 -------HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
+ + G KG P V I + G K G A + E + RGV Y
Sbjct: 194 RGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYT 253
Query: 412 KFLHYYS 418
++ S
Sbjct: 254 SLIYALS 260
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 89/201 (44%), Gaps = 28/201 (13%)
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISLYHGLIKGL 324
+ A+ + +MF+ + T + ++ L + G+ A +++ ++ +P+ Y+ +I G
Sbjct: 23 APAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPRPNAVTYNTVIAGF 82
Query: 325 LRLRRAREATQVFREMIKR-GCEPTMHTYIMLLQG--HLGK-------------RGRKGP 368
R + A + REM +R G P +TY ++ G +G+ +G P
Sbjct: 83 CSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKP 142
Query: 369 DPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY----SNEEGVV 424
+ ++ +GG GK A Y +R++ RGV + YN +H E
Sbjct: 143 EAVMY--NALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 200
Query: 425 MFEEVGKKLREVGLADLADIF 445
+ EE+G K GLA D+F
Sbjct: 201 LVEEMGGK----GLA--PDVF 215
>gi|255660828|gb|ACU25583.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 418
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 137/288 (47%), Gaps = 41/288 (14%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T + L L +++ K + F+ + +CG SL N ++ C+ + A+ + +
Sbjct: 103 TCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAI 162
Query: 170 SEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++W ++P+ ++Y L+ GY +GDL E ++ + M G +P + +I K +K
Sbjct: 163 TKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKM 222
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
D+A ++F M VK + G+ T+ +ID CK G++ A + ++M + + D +T ++
Sbjct: 223 DDANELFDEMLVKGLVPNGV-TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 281
Query: 289 IIYGLLARGRLREAYKVVEEIE----KPDISLYHGLI----------------------- 321
+IYGL +G L++A+ +++E+ KPD Y LI
Sbjct: 282 LIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQEN 341
Query: 322 ------------KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
GL + R+ +A ++ REM+ G +P TY M++
Sbjct: 342 IRLDEVAYTALXSGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIIN 389
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 87/211 (41%), Gaps = 44/211 (20%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
N +TF ++D K+ +DL E ++M + L D
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPD------------------------ 275
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVG 191
L N ++ LC++ + +A +LI ++S + +KP++I Y LI G C G
Sbjct: 276 ----------LITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEG 325
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS-- 249
DL A + M E +D++ T E V ++ M +GL
Sbjct: 326 DLDSAFEHRKRMIQENIR-----LDEVAYTALXSGLCQEGRSVDAEKMLREMLSVGLKPD 380
Query: 250 --TYRIVIDWMCKRGKISQAYTMLEEMFKRG 278
TY ++I+ CK+G + + +L+EM + G
Sbjct: 381 ARTYTMIINEFCKKGDVWKGSKLLKEMQRDG 411
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 136/313 (43%), Gaps = 27/313 (8%)
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIA 179
VR LKKM+ +++ N ++ C+ V E L ++ + I+P+
Sbjct: 511 VRLLKKMLERGFVLDKI-------TYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFT 563
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
Y LI G C +G L EA +WN P++ MI+ + K +K +E K+F +
Sbjct: 564 YNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELL 623
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
+ ++ L Y +I C+ G +A+ + ++M +GI T SS+I+G+ GR+
Sbjct: 624 TQNLE-LNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRM 682
Query: 300 REAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
+A +++E+ K P++ Y LI G +L + + V +EM P TY ++
Sbjct: 683 EDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVM 742
Query: 356 LQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
+ G+ K G KG P + G K GK + K + + G
Sbjct: 743 IDGY-SKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEG 801
Query: 403 VEVPRFDYNKFLH 415
+ + Y +H
Sbjct: 802 LPLDEITYTTLVH 814
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 166/367 (45%), Gaps = 57/367 (15%)
Query: 125 KKMVNFFHIMND-CGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKP-------- 175
K +NFF+ +D CG ++L ++++L V A+ L+++L + P
Sbjct: 93 KTALNFFYFASDSCGFRFTLRSYCVLMRSLIVSGFVSPARLLLIRLIDRKLPVLFGDPKN 152
Query: 176 ------------NEI--------AYGWLIKGYC----DVGDLIEASKIWNLMTDEGFEPS 211
NE+ A LI YC +VG A ++ + ++G P+
Sbjct: 153 RHIEIASAMADLNEVGESGVAVAAVDLLIHVYCTQFRNVG-FRNAIGVFRFLANKGVFPT 211
Query: 212 IDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTML 271
+ ++ + K N+ +++ VF+ MR D+ L + I+ CK GK+ A +
Sbjct: 212 VKTCTFLLSSLVKANELEKSYWVFETMRQGVSPDVYL--FSTAINAFCKGGKVEDAIQLF 269
Query: 272 EEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDIS----LYHGLIKGLLRL 327
+M K G+ + +T +++I+GL G L EA++ E++ K ++ Y LI GL++L
Sbjct: 270 FDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKL 329
Query: 328 RRAREATQVFREMIKRGCEPTMHTYIMLLQGH--LGKRG----------RKGPDP-LVNF 374
+ EA V +E +++G P Y L+ G+ +G G KG +P V
Sbjct: 330 EKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTL 389
Query: 375 DTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLR 434
++I + G K G+ A +E +++RG + + +H+ FE + LR
Sbjct: 390 NSI-IQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNS---RFESALRFLR 445
Query: 435 EVGLADL 441
E+ L ++
Sbjct: 446 EMLLRNM 452
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 116/251 (46%), Gaps = 28/251 (11%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
L + PNE+ Y LI GYC +G+L +A +I M +G P+ ++ +I+ F KI +
Sbjct: 343 LEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQM 402
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
++A + + M + R + + +I W+C + A L EM R + ++ L++
Sbjct: 403 EQAECILEEM-LSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTT 461
Query: 289 IIYGLLARGRLREA----YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
++ GL G+ +A ++++E+ ++ + LI GL + +EA ++ ++M++RG
Sbjct: 462 LVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERG 521
Query: 345 CEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVE 404
TY L + G K GK + K ++ +G+E
Sbjct: 522 FVLDKITYNTL-----------------------ISGCCKEGKVEEGFKLRGEMVKQGIE 558
Query: 405 VPRFDYNKFLH 415
F YN +H
Sbjct: 559 PDTFTYNLLIH 569
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/353 (20%), Positives = 149/353 (42%), Gaps = 21/353 (5%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMV 128
F N + +N ++D K N+ +M + + N T + ++ ++++
Sbjct: 347 FTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAE 406
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGY 187
M G + ++ LC A ++L L ++PN+ L+ G
Sbjct: 407 CILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGL 466
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C G +A ++W + ++GF ++ + +I K EA+++ + M ++R L
Sbjct: 467 CKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKM-LERGFVLD 525
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
TY +I CK GK+ + + + EM K+GIE D T + +I+G+ G+L EA +
Sbjct: 526 KITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWN 585
Query: 308 EIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
E + P++ Y +I G + + E ++F E++ + E Y L++ + +
Sbjct: 586 ECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYC-RN 644
Query: 364 GR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
G KG P + + G+ G+ DA ++ + G+
Sbjct: 645 GNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGL 697
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 117/257 (45%), Gaps = 7/257 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
++ T+N ++ + + +D E R LV N T+ + + + ++++ F
Sbjct: 560 DTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLF 619
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
+ E + + N +++ C+ VEA L + S+ I P Y LI G C++
Sbjct: 620 TELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNI 679
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G + +A + + M EG P++ +I + K+ + D+ + V Q M + + T
Sbjct: 680 GRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKI-T 738
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y ++ID K G + A +L EM +GI D +T + + G G++ E +K+ + +
Sbjct: 739 YTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMS 798
Query: 311 KPDISL----YHGLIKG 323
+ + L Y L+ G
Sbjct: 799 QEGLPLDEITYTTLVHG 815
>gi|255660858|gb|ACU25598.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 418
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 137/288 (47%), Gaps = 41/288 (14%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T + L L +++ K + +F+ + +CG SL N V+ C+ + A+ + +
Sbjct: 103 TCRKVLEHLMKLKYFKLVWDFYKEILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAI 162
Query: 170 SEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++W ++P+ +++ L+ GY +GDL E ++ + M G +P + +I K +K
Sbjct: 163 TKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKV 222
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
DEA ++F M + + G+ T+ +ID CK G + A + ++M +G D +T ++
Sbjct: 223 DEANELFNEMLDRGLVPNGV-TFTTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNT 281
Query: 289 IIYGLLARGRLREAYKVVEEIE----KPD------------------------------- 313
+IYGL +G L++ +++E+ KPD
Sbjct: 282 LIYGLCKKGDLKQVRALIDEMSMNGLKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKES 341
Query: 314 ISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
I L Y L+ GL + RA +A ++FREM+ G +P TY M++
Sbjct: 342 IRLDNVAYTALVSGLCQEGRADDAEKMFREMLSVGLKPDNGTYTMIIN 389
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 104/225 (46%), Gaps = 10/225 (4%)
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGD 192
M+ G + + + ++ LC+ V EA L + L + PN + + LI +C G
Sbjct: 197 MHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHCKNGM 256
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS--T 250
+ A +I+ M +GF P + + +I + + K + +V ++ M+ L T
Sbjct: 257 VDSAMEIYKQMLSQGFSPDLITYNTLI---YGLCKKGDLKQVRALIDEMSMNGLKPDKIT 313
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y +ID CK G + A+ + M K I DN+ ++++ GL GR +A K+ E+
Sbjct: 314 YTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREML 373
Query: 311 ----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
KPD Y +I + R A+++ +EM + G P + T
Sbjct: 374 SVGLKPDNGTYTMIINEFCKKGDVRTASRLLKEMQRDGHVPCVVT 418
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 87/208 (41%), Gaps = 38/208 (18%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
N +TF ++D+ K+ +D E ++M + D
Sbjct: 240 NGVTFTTLIDVHCKNGMVDSAMEIYKQMLSQGFSPD------------------------ 275
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVG 191
L N ++ LC++ + + + LI ++S +KP++I Y LI G C G
Sbjct: 276 ----------LITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITYTTLIDGCCKEG 325
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLST 250
DL A + M E ++ + + D+A K+F +M+ V D G T
Sbjct: 326 DLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREMLSVGLKPDNG--T 383
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRG 278
Y ++I+ CK+G + A +L+EM + G
Sbjct: 384 YTMIINEFCKKGDVRTASRLLKEMQRDG 411
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 165/386 (42%), Gaps = 57/386 (14%)
Query: 65 KAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVREL 124
K Q F N + + ++ GKS N+ + ++ EM R+++V D
Sbjct: 349 KNQRIFPDN-VVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPD---------------- 391
Query: 125 KKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWL 183
++ LCQ VVEA+ L + LS+ +KP+E+ Y L
Sbjct: 392 ------------------FVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTAL 433
Query: 184 IKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM 243
I GYC G++ EA + N M ++G P++ +++ K + D A ++ M K +
Sbjct: 434 IDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGL 493
Query: 244 DDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
+ TY +I+ +CK G I QA ++EEM G D +T ++I+ G + +A+
Sbjct: 494 QP-NVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAH 552
Query: 304 KV----VEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
++ +++ +P I ++ L+ G + ++ + M+ +G P T+ L++ +
Sbjct: 553 ELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQY 612
Query: 360 LGKRG------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPR 407
+ +G P N I + G KA +A + ++ +G +
Sbjct: 613 CIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTA 672
Query: 408 FDYNKFLHYYSN----EEGVVMFEEV 429
YN + + EE +FEE+
Sbjct: 673 ASYNSLIKGFYKRKKFEEARKLFEEM 698
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 125/261 (47%), Gaps = 14/261 (5%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
N ++ I L L ++ ++K+ + M G + + +V CQ VE +
Sbjct: 251 NTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQ----VEQLGKV 306
Query: 167 LKLSE-----WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIET 221
LKL E +KPN+ Y +I C G ++EA ++ +M ++ P V +I
Sbjct: 307 LKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISG 366
Query: 222 FFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEA 281
F K K+F M+ K++ TY +I +C+ GK+ +A + EM +G++
Sbjct: 367 FGKSGNVSVEYKLFDEMKRKKIVP-DFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKP 425
Query: 282 DNLTLSSIIYGLLARGRLREAY----KVVEEIEKPDISLYHGLIKGLLRLRRAREATQVF 337
D +T +++I G G ++EA+ ++VE+ P++ Y L+ GL + A ++
Sbjct: 426 DEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELL 485
Query: 338 REMIKRGCEPTMHTYIMLLQG 358
EM ++G +P + TY L+ G
Sbjct: 486 HEMSEKGLQPNVCTYNALING 506
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 120/265 (45%), Gaps = 9/265 (3%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMT 117
F + Q + N +T+ +VD + K +D+ E L EM + L N T+ +
Sbjct: 447 FSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALING 506
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPN 176
L +V +++ V M+ G ++ C+ + +A L+ + L + ++P
Sbjct: 507 LCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPT 566
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
+ + L+ G+C G L + ++ M D+G P+ + +++ + N +++++
Sbjct: 567 IVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYK 626
Query: 237 MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR 296
M + + +TY I+I CK + +A+ + +EM ++G + +S+I G R
Sbjct: 627 GMHAQGVVP-DTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKR 685
Query: 297 GRLREAYKVVEEIEKPDISLYHGLI 321
+ EA K+ EE+ HG I
Sbjct: 686 KKFEEARKLFEEMRT------HGFI 704
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 124/274 (45%), Gaps = 27/274 (9%)
Query: 165 LILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFK 224
LI +W + + + + + G L+EA K+++ + + G S+D + +
Sbjct: 170 LIYTYKDW-GAHPLVFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARL-- 226
Query: 225 INKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIE 280
N D F++ R ++G+ +Y I++ +C+ GK+ +A+++L +M RG
Sbjct: 227 SNSFDGIRTAFRVFR--EYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNV 284
Query: 281 ADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQV 336
D ++ S I+ G +L + K++EE++ KP+ Y+ +I L + R EA QV
Sbjct: 285 PDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQV 344
Query: 337 FREMIKRGCEPTMHTYIMLLQGHLGKRG-------------RKGPDPLVNFDTIFVGGLV 383
R M + P Y L+ G GK G RK P T + GL
Sbjct: 345 LRVMKNQRIFPDNVVYTTLISG-FGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLC 403
Query: 384 KAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
+AGK ++A K ++++G++ Y + Y
Sbjct: 404 QAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGY 437
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 132/282 (46%), Gaps = 15/282 (5%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
+ +T+ ++D K+ + + +M + L N T+ + L + E+
Sbjct: 426 DEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELL 485
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDV 190
H M++ G + ++ N ++ LC+ + +A L+ ++ P+ I Y ++ YC +
Sbjct: 486 HEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKM 545
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL-- 248
G++ +A ++ +M D+G +P+I + ++ F ++ ++ +K M D G+
Sbjct: 546 GEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERL-----IKWMLDKGIMP 600
Query: 249 --STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
+T+ ++ C R + + + M +G+ D T + +I G ++EA+ +
Sbjct: 601 NATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLH 660
Query: 307 EEIEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRG 344
+E+ + SL Y+ LIKG + ++ EA ++F EM G
Sbjct: 661 KEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHG 702
>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 624
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 137/292 (46%), Gaps = 7/292 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
N + +N ++ I + + E L EM ++ ++D TF I + + + +++
Sbjct: 300 NVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELL 359
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
M + GC + V+ C+ L+ EA L+ + S KPN I+Y ++KG C
Sbjct: 360 EQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCST 419
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
++A ++ + M +G P+ + +I K ++A+++ + M V + L +
Sbjct: 420 ERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNP-DLIS 478
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y VID + K GK +A +L M +GI + +T SS+ + L GR+ + ++ + I+
Sbjct: 479 YSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQ 538
Query: 311 ----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+ D LY+ +I L + R A M+ GC P TY L++G
Sbjct: 539 DATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKG 590
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 151/314 (48%), Gaps = 36/314 (11%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLI---LKLSEWIK--------PNEIAYGWLIKG 186
GCE + N V+K LC K + + L+ +K+ E + P+ Y +I G
Sbjct: 216 GCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDG 275
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR--MD 244
C G A++I + M G +P++ + +++ ++ ++A ++ M K +D
Sbjct: 276 ICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLD 335
Query: 245 DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK 304
D+ T+ I++D+ C+ G + + +LE+M + G D +T +++I G G + EA
Sbjct: 336 DV---TFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVM 392
Query: 305 VVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL 360
+++ + KP+ Y ++KGL R +A ++ MI++GC P T+ ++ L
Sbjct: 393 LLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIIN-FL 451
Query: 361 GKRGR-------------KGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
K+G G +P L+++ T+ + GL KAGK+ +A + + ++N+G+
Sbjct: 452 CKKGLVEQAIELLKQMLVNGCNPDLISYSTV-IDGLGKAGKTEEALELLNVMINKGITPN 510
Query: 407 RFDYNKFLHYYSNE 420
Y+ + E
Sbjct: 511 VITYSSMAFALARE 524
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 101/226 (44%), Gaps = 17/226 (7%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDE 206
N +V C+ V A+ L + + PN Y +++G C G + +A + + MT
Sbjct: 88 NAMVAGYCRVGQVEAARRLAAAVP--VPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSR 145
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQ 266
P + +IE+ + A++V + + K L +VI+ +C +G + +
Sbjct: 146 SCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKG-STLDTGNCNLVINAICDQGCVDE 204
Query: 267 AYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK--------------P 312
ML ++ G EAD ++ ++++ GL A R + ++++E+ K P
Sbjct: 205 GLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTP 264
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
DI +Y +I G+ + A ++ M G +P + Y +L+G
Sbjct: 265 DIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKG 310
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 84/195 (43%), Gaps = 18/195 (9%)
Query: 178 IAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQM 237
+ Y ++ GYC VG +EA++ L P+ ++ + +A+ V
Sbjct: 85 VDYNAMVAGYCRVGQ-VEAAR--RLAAAVPVPPNAYTYFPVVRGLCGRGRIADALAVLDE 141
Query: 238 MRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
M + + Y ++I+ C+ G S A +LE + +G D + +I + +G
Sbjct: 142 MTSRSCVPIP-PMYHVIIESACRSGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQG 200
Query: 298 RLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIK----------R 343
+ E +++ ++ + DI Y+ ++KGL +R + ++ EM+K
Sbjct: 201 CVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQH 260
Query: 344 GCEPTMHTYIMLLQG 358
GC P + Y ++ G
Sbjct: 261 GCTPDIRMYATIIDG 275
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/287 (19%), Positives = 124/287 (43%), Gaps = 43/287 (14%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N V+ +C + V E ++ KL + + + ++Y ++KG C A+K W
Sbjct: 190 NLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLC-------AAKRWG---- 238
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKIS 265
V+++++ K++ EA+ QM + D+ + Y +ID +CK G
Sbjct: 239 --------DVEELMDEMVKVH---EALS--QMAQHGCTPDIRM--YATIIDGICKEGHHE 283
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISL----YHGLI 321
A +L M G++ + + ++++ G+ + R +A +++ E+ + + L ++ L+
Sbjct: 284 VANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILV 343
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------------LGKRGRKGPD 369
+ ++ +M++ GC P + TY ++ G L G
Sbjct: 344 DFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCK 403
Query: 370 PLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHY 416
P TI + GL + +DA + + R++ +G +N +++
Sbjct: 404 PNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINF 450
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 58/129 (44%), Gaps = 2/129 (1%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHI 133
I+++ ++D +GK+ + E L M + + N T+ LA + K++ F
Sbjct: 477 ISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDN 536
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLV-VEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGD 192
+ D + N V+ +LC+R+ + +L +S PNE Y LIKG G
Sbjct: 537 IQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGL 596
Query: 193 LIEASKIWN 201
L EA + +
Sbjct: 597 LCEAQDLLS 605
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 153/348 (43%), Gaps = 30/348 (8%)
Query: 114 ALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW- 172
AL +VRE M + GC + N ++ LC+ V EA + ++
Sbjct: 228 ALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYG 287
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
+ P+ YG LI G C EA + + M+ +P++ V +I+ F + DEA
Sbjct: 288 LVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAF 347
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
K+ + M + + TY ++ +CK G++ +A +L++M + D +T + II G
Sbjct: 348 KMIKEMVAAGVQPNKI-TYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEG 406
Query: 293 LLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
++A++++ E+E P++ Y +I GL + +A+ + EM +G +P
Sbjct: 407 HFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPN 466
Query: 349 MHTYIMLLQGHLGKRGRKG------------------PDPLVNFDTIFVGGLVKAGKSLD 390
Y L+ G+ R+G PD IF GL K G+ +
Sbjct: 467 AFVYAPLISGYC----REGNVSLACEIFDKMTKVNVLPDLYCYNSLIF--GLSKVGRVEE 520
Query: 391 AAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
+ KY ++ RG+ F Y+ +H Y + E++ +++ + GL
Sbjct: 521 STKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGL 568
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 168/387 (43%), Gaps = 52/387 (13%)
Query: 86 KSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLE 144
K R D + L EM R +N T+ + + L +++ F M D G
Sbjct: 234 KVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGF 293
Query: 145 MLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLM 203
++ LC+ + EAK L+ ++S +KPN + Y LI G+ G+ EA K+ M
Sbjct: 294 TYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEM 353
Query: 204 TDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMR----------------------- 239
G +P+ D ++ K+ + D A + QM+R
Sbjct: 354 VAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSK 413
Query: 240 ------VKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSI 289
+ M++ G+S TY I+I +C+ G+ +A +LEEM +G++ + + +
Sbjct: 414 KDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPL 473
Query: 290 IYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGC 345
I G G + A ++ +++ K PD+ Y+ LI GL ++ R E+T+ F +M +RG
Sbjct: 474 ISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGL 533
Query: 346 EPTMHTYIMLLQGHLGKRGRKGPDPLVN---------FDTIFVGGLVKAGKSLDAAKY-- 394
P TY L+ G+L + + LV D I++ L KS D K
Sbjct: 534 LPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSS 593
Query: 395 -VERVMNRGVEVPRFDYNKFLHYYSNE 420
+ ++++GV + Y +H S+
Sbjct: 594 TFKSMLDQGVMLDNRIYGILIHNLSSS 620
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 127/297 (42%), Gaps = 17/297 (5%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRE--LKKMVNF 130
N T++ M+ + +S + + L+EM + L F A + RE +
Sbjct: 431 NVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGL-KPNAFVYAPLISGYCREGNVSLACEI 489
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCD 189
F M L N ++ L + V E+ KY + PNE Y LI GY
Sbjct: 490 FDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLK 549
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL- 248
GDL A ++ M D G +P+ + ++E++FK + ++ F K M D G+
Sbjct: 550 NGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTF-----KSMLDQGVM 604
Query: 249 ---STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
Y I+I + G + A+ +L + K G D SS+I GL +A+ +
Sbjct: 605 LDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGI 664
Query: 306 VEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
++E+ K P+I Y+ LI GL + A VF ++ +G P TY L+ G
Sbjct: 665 LDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDG 721
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 123/273 (45%), Gaps = 16/273 (5%)
Query: 77 FNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVNFFHIMN 135
+ ++ + S N++ + L + + V D +L++ L + + +K M+
Sbjct: 610 YGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMS 669
Query: 136 DCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGDLI 194
G + ++ N ++ LC+ + A+ + L++ + PN + Y LI G C VGD+
Sbjct: 670 KKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDIS 729
Query: 195 EASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIV 254
A ++N M G P V + ++AM + + M ++ +S++ +
Sbjct: 730 NAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLR--GHASISSFNNL 787
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDI 314
+D CKRGK+ + +L + RG+ + LT+ +II GL G+L E + + E+++
Sbjct: 788 VDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTS 847
Query: 315 SLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
AR + +F +MI +G P
Sbjct: 848 E------------SAARHFSSLFMDMINQGKIP 868
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 150/375 (40%), Gaps = 66/375 (17%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNF-- 130
N IT++ +V + K +D L++M R D T L+ R K F
Sbjct: 361 NKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPD-TITYNLIIEGHFRHHSKKDAFRL 419
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCD 189
M + G ++ + ++ LCQ +A L+ +++ + +KPN Y LI GYC
Sbjct: 420 LSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCR 479
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR---------- 239
G++ A +I++ MT P + + +I K+ + +E+ K F M+
Sbjct: 480 EGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFT 539
Query: 240 --------------------VKRMDDLGLSTYRIV-IDWM---CKRGKISQAYTMLEEMF 275
V+RM D GL ++ ID + K I + + + M
Sbjct: 540 YSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSML 599
Query: 276 KRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAR 331
+G+ DN +I+ L + G + A++V+ IEK PD+ +Y LI GL +
Sbjct: 600 DQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADRE 659
Query: 332 EATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDA 391
+A + EM K KG DP + + GL K+G A
Sbjct: 660 KAFGILDEMSK-----------------------KGVDPNIVCYNALIDGLCKSGDISYA 696
Query: 392 AKYVERVMNRGVEVP 406
++ +G+ VP
Sbjct: 697 RNVFNSILAKGL-VP 710
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 150/340 (44%), Gaps = 22/340 (6%)
Query: 109 KTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK 168
K F + + L + EL N F M G ++ N ++ +C+ + A+ L +
Sbjct: 117 KLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRR 176
Query: 169 LSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINK 227
+SE + P+ YG LI+G C VG + +A ++ M G +P+ V +I+ K
Sbjct: 177 MSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGD 236
Query: 228 DDEAMKVFQMMRVK--RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
+ +++ + MR + R D + TY +++ +C+ + A ++ EM G+ D +T
Sbjct: 237 AETMLELHREMRERGVRPDAV---TYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVT 293
Query: 286 LSSIIYGLLARGRLREAYKVVEEIEKPDISL----YHGLIKGLLRLRRAREATQVFREMI 341
+++I G L A ++ + + + L Y LI GL + R+ +A +V EM+
Sbjct: 294 YTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMM 353
Query: 342 KRGCEPTMHTYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSL 389
+ G EP TY M++ L + KG P V + + G K G+
Sbjct: 354 EAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMK 413
Query: 390 DAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEV 429
+A + ++N GV YN L + V EE+
Sbjct: 414 NADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEEL 453
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 142/321 (44%), Gaps = 39/321 (12%)
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYC 188
F+ + D G ++ N +++ L + + A+ + ++ S ++ +++ +I G C
Sbjct: 103 FYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMC 162
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
GDL A + M++ G P + +I+ ++ + ++A VF+ M + M +
Sbjct: 163 RAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAV 222
Query: 249 STYRIVIDWMCKRGKISQAYTMLE---EMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
+ I+ID CK+G A TMLE EM +RG+ D +T ++I+ GL L+ A +
Sbjct: 223 -VFTILIDAHCKKG---DAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGI 278
Query: 306 VEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG 361
V E+ +PD Y LI G + A ++ + M+ G TY
Sbjct: 279 VVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTY--------- 329
Query: 362 KRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN-- 419
T + GL KAG+S DA + + +M G+E Y + +
Sbjct: 330 --------------TALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKG 375
Query: 420 --EEGVVMFEEVGKKLREVGL 438
+ G+ + +E+ K R+ G+
Sbjct: 376 DVKTGLRLLKEMQNKGRKPGV 396
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 113/258 (43%), Gaps = 16/258 (6%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N++ F ++D K + + E +EM R + D T+ + L R+LK
Sbjct: 220 NAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIV 279
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRK---LVVEAKYLILKLSEWIKPNEIAYGWLIKGYC 188
M G ++ C+ + + +E K ++ +E + +E+ Y LI G
Sbjct: 280 VEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMV--AEGVGLDEVTYTALISGLS 337
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
G +A ++ M + G EP +I+ F + +++ + M+ K G+
Sbjct: 338 KAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKP-GV 396
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY ++++ CK G++ A +L M G+ D++T + ++ G G++ + +EE
Sbjct: 397 VTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTD----IEE 452
Query: 309 IEK-----PDISLYHGLI 321
++ PD+ +Y ++
Sbjct: 453 LKSAKGTVPDLGVYTSIV 470
>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 135/278 (48%), Gaps = 19/278 (6%)
Query: 179 AYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
AY +I G+C G + +A ++ M +GFEP++ +I+ KI++ DEA +F+
Sbjct: 589 AYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 648
Query: 239 RVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR 298
+ KR++ L + Y +ID K G+I +AY +LEE+ ++G+ + T +S++ L+
Sbjct: 649 KSKRIE-LNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEE 707
Query: 299 LREA---YKVVEEIE-KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIM 354
+ EA ++ ++E++ P+ Y LI GL ++R+ +A ++EM K+G +P+ +Y
Sbjct: 708 INEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTT 767
Query: 355 LLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNR 401
++ G L K G G P + GL +++DA E R
Sbjct: 768 MISG-LAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRR 826
Query: 402 GVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLA 439
G+ + L + + VG LRE G A
Sbjct: 827 GLHIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETGKA 864
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 146/328 (44%), Gaps = 40/328 (12%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVN 129
A N T+N ++D++ ++ +D +E M + L N +T I + L + ++L +
Sbjct: 374 APNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACA 433
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYC 188
F M+ C ++ L + V +A + K L + N I Y LIK +
Sbjct: 434 IFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFF 493
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR------ 242
+ G + KI+ M ++ P + +++ ++ FK + ++ +F+ ++ +R
Sbjct: 494 NHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDAR 553
Query: 243 ------------------------MDDLGL----STYRIVIDWMCKRGKISQAYTMLEEM 274
M + G Y IVID CK GK+++AY +LEEM
Sbjct: 554 SYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEM 613
Query: 275 FKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISL----YHGLIKGLLRLRRA 330
+G E +T S+I GL RL EAY + EE + I L Y LI G ++ R
Sbjct: 614 KTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRI 673
Query: 331 REATQVFREMIKRGCEPTMHTYIMLLQG 358
EA + E++++G P ++T+ LL
Sbjct: 674 DEAYLILEELMQKGLTPNVYTWNSLLDA 701
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 134/296 (45%), Gaps = 9/296 (3%)
Query: 77 FNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKT-FKIALMTLAEVRELKKMVNFFHIMN 135
F ++ K +D L EM L D + + + + +V ++ FFH +
Sbjct: 206 FTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIE 265
Query: 136 DCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIK-PNEIAYGWLIKGYCDVGDLI 194
G + ++ LC+ + EA + L + + P AY +I GY G
Sbjct: 266 ANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFD 325
Query: 195 EASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIV 254
EA + +G PS+ + ++ K+ K DEA++VF+ M K+ LSTY I+
Sbjct: 326 EAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEM--KKDAAPNLSTYNIL 383
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE---- 310
ID +C+ GK+ A+ + + M K G+ + T++ ++ L +L EA + E+++
Sbjct: 384 IDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVC 443
Query: 311 KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK 366
PD + LI GL ++ R +A +++ +M+ C Y L++ GRK
Sbjct: 444 TPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFF-NHGRK 498
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 135/271 (49%), Gaps = 9/271 (3%)
Query: 91 DLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVV 150
+LF+ +++E G +++ + + I + + ++ K M G E ++ V+
Sbjct: 573 ELFY-SMKEQGC--VLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVI 629
Query: 151 KTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFE 209
L + + EA L + S+ I+ N + Y LI G+ VG + EA I + +G
Sbjct: 630 DGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLT 689
Query: 210 PSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYT 269
P++ + +++ K + +EA+ FQ M+ + + TY I+I+ +CK K ++A+
Sbjct: 690 PNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQV-TYGILINGLCKVRKFNKAFV 748
Query: 270 MLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLL 325
+EM K+G++ ++ +++I GL G + EA + + + PD + Y+ +I+GL
Sbjct: 749 FWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLS 808
Query: 326 RLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
RA +A +F E +RG T ++LL
Sbjct: 809 NGNRAMDAFSLFEETRRRGLHIHNKTCVVLL 839
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 99/464 (21%), Positives = 183/464 (39%), Gaps = 64/464 (13%)
Query: 11 VCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCF 70
+C +L + P + ++LS+ NF EF + + R + F Y ++ +
Sbjct: 39 ICNVLETGAWGPSA--ENALSALNFKPQPEFVIGVLRRLKDVNRAIEYFRWYERRTE--L 94
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNF 130
H ++N ++ ++ + RN D + L EM + F
Sbjct: 95 PHCPESYNSLLLVMARCRNFDALDQILGEM-------------------------SVAGF 129
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCD 189
+N C +EM+ VK R E ++ + ++ +P AY LI +
Sbjct: 130 GPSVNTC-----IEMVLSCVKANKLR----EGFDVVQNMRKFKFRPAFSAYTTLIGAFSA 180
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
V ++ M + G+EP++ + +I F K + D A+ + M+ + D +
Sbjct: 181 VNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSL-DADIV 239
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
Y + ID K GK+ A+ E+ G++ D +T +S+I L RL EA ++ E +
Sbjct: 240 LYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHL 299
Query: 310 EK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY--IMLLQGHLGK- 362
EK P Y+ +I G + EA + +G P++ Y I+ +GK
Sbjct: 300 EKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKV 359
Query: 363 --------RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFD----- 409
+K P ++ I + L +AGK LD A + M + P
Sbjct: 360 DEALRVFEEMKKDAAPNLSTYNILIDMLCRAGK-LDCAFELRDSMQKAGLFPNVRTVNIM 418
Query: 410 YNKFLHYYSNEEGVVMFEEVGKKL---REVGLADLADIFQRYGK 450
++ +E +FE++ K+ E+ L D + G+
Sbjct: 419 VDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGR 462
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 163/395 (41%), Gaps = 88/395 (22%)
Query: 69 CFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMV 128
C + + +N +D GK+ N+D+ W+
Sbjct: 247 CLEPDIVLYNVCIDCFGKAGNVDMAWK--------------------------------- 273
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGY 187
FFH + G + ++ LC+ + EA+ L ++ +E P AY +I GY
Sbjct: 274 -FFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGY 332
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
G A K+ + + + G PS+ + ++ K K DEA+ +F+ M K+ +
Sbjct: 333 GSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAM--KKDAEPN 390
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEM--------------------------------- 274
STY I+ID +C GK+ +AY + +EM
Sbjct: 391 SSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFE 450
Query: 275 --FKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLR 328
+RG +++T S+I GL +G + +AY++ E + + +Y LI+
Sbjct: 451 TASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHG 510
Query: 329 RAREATQVFREMIKRGCEPT---MHTYI-MLLQGHLGKRGRK--------GPDPLVNFDT 376
R + ++F+EM +RGC+P ++TY+ + + ++GR G P V +
Sbjct: 511 RKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYS 570
Query: 377 IFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
I + GL KAG++ + + + +G + YN
Sbjct: 571 ILIHGLTKAGQARETSSIFHAMKQQGFALDARAYN 605
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/423 (23%), Positives = 172/423 (40%), Gaps = 73/423 (17%)
Query: 53 WRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNID---LFWETLQEMGRRRLVNDK 109
+ P Y F+ T + C NS+T+ ++D +GK N+D +E + + G N
Sbjct: 442 FEPAYEMFE-TASQRGC-NPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHN--ANPV 497
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
+ + + F MN GC+ L +LN + + + V + + + +
Sbjct: 498 VYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDI 557
Query: 170 SEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
+ P+ +Y LI G G E S I++ M +GF + +++ F K K
Sbjct: 558 KGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKL 617
Query: 229 DEAMKVFQMMRVKRMD----------------------------------DLGLSTYRIV 254
D+A +V + M+VKR+ +L + Y +
Sbjct: 618 DKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSL 677
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA---YKVVEEIE- 310
ID K G+I +AY +LEEM K+G+ + T +S++ L+ + EA ++ ++E++
Sbjct: 678 IDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKC 737
Query: 311 KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDP 370
P+ Y LI GL R+++ +A ++EM K+G P + TY
Sbjct: 738 SPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTY------------------ 779
Query: 371 LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE----EGVVMF 426
T + GL K G DA ER G +N + S+ E +F
Sbjct: 780 -----TTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVF 834
Query: 427 EEV 429
EE
Sbjct: 835 EET 837
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 135/297 (45%), Gaps = 40/297 (13%)
Query: 67 QPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELK 125
Q FA ++ +N +VD KS +D +E L+EM +R+ T+ + LA++ L
Sbjct: 594 QQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLD 653
Query: 126 KMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIK 185
+ F EAK S+ I+ N I Y LI
Sbjct: 654 EAYMLFE----------------------------EAK------SKGIELNVIVYSSLID 679
Query: 186 GYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD 245
G+ VG + EA I M +G P++ + +++ K + +EA+ FQ M+ +
Sbjct: 680 GFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSP 739
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
TY I+I+ +C+ K ++A+ +EM K+G+ + +T +++I GL G + +A +
Sbjct: 740 -NTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSL 798
Query: 306 VEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
E + PD + ++ LI+G+ RA EA VF E +GC + I LL
Sbjct: 799 FERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDA 855
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 140/330 (42%), Gaps = 40/330 (12%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIM 134
++FN ++ +GK R +D + M + N T+ I + L ++++ M
Sbjct: 358 VSFNSILTCLGKKRKVDEALTLFEAMKKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEM 417
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDL 193
G +L +N +V LC+ K A + S+ PN + Y LI G G++
Sbjct: 418 EHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNV 477
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGL---- 248
+A +++ M D G + V +I FF + ++ K+F +M R DL L
Sbjct: 478 DDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTY 537
Query: 249 -----------------------------STYRIVIDWMCKRGKISQAYTMLEEMFKRGI 279
+Y I+I + K G+ + ++ M ++G
Sbjct: 538 MDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGF 597
Query: 280 EADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQ 335
D ++++ G G+L +AY+V+EE++ P ++ Y +I GL ++ R EA
Sbjct: 598 ALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYM 657
Query: 336 VFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
+F E +G E + Y L+ G GK GR
Sbjct: 658 LFEEAKSKGIELNVIVYSSLIDG-FGKVGR 686
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 105/260 (40%), Gaps = 21/260 (8%)
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTY 251
DL K+ M+ G+ ++ + + D+A +V MR + S Y
Sbjct: 127 DLAAMEKVLEEMSVLGYGVPNPACADLVSALVRTRRLDDAERVIAAMRRLKFRP-AFSAY 185
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE- 310
++I M + + +A +L +M + G E ++++ L GR+ A +V+E++
Sbjct: 186 TVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKG 245
Query: 311 ---KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP-----TMHTYIMLLQGHL-- 360
+PDI LY+ I + A + F E+ +G +P T +++ G L
Sbjct: 246 SCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSE 305
Query: 361 -----GKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
G+ + P + G AG+ +A K ++++ RG +N L
Sbjct: 306 AEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILT 365
Query: 416 YYSN----EEGVVMFEEVGK 431
+E + +FE + K
Sbjct: 366 CLGKKRKVDEALTLFEAMKK 385
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 143/312 (45%), Gaps = 29/312 (9%)
Query: 111 FKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS 170
F L +A++++ +++ M G ++L N ++ C+R + A L+ K+
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 171 EW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD 229
+ +P+ + L+ GYC + +A + + M + G+ P +I F NK
Sbjct: 73 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 132
Query: 230 EAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSI 289
EA+ + M V+R L TY +V++ +CKRG I A+ +L +M IEAD + ++I
Sbjct: 133 EAVALVDRM-VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTI 191
Query: 290 IYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGC 345
I L + +A + +E+E +P++ Y LI L R +A+Q+ +MI++
Sbjct: 192 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 251
Query: 346 EPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEV 405
P + T+ L + VK GK ++A K + ++ R ++
Sbjct: 252 NPNLVTFNAL-----------------------IDAFVKEGKFVEAEKLHDDMIKRSIDP 288
Query: 406 PRFDYNKFLHYY 417
F YN ++ +
Sbjct: 289 DIFTYNSLINGF 300
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 134/292 (45%), Gaps = 7/292 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKT-FKIALMTLAEVRELKKMVNFF 131
N +T+ +V+ + K +IDL + L +M ++ D F + +L + R + +N F
Sbjct: 149 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 208
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
M G ++ + ++ LC +A L+ + E I PN + + LI +
Sbjct: 209 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 268
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G +EA K+ + M +P I + +I F ++ D+A ++F+ M K L T
Sbjct: 269 GKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFP-DLDT 327
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y +I CK ++ + EM RG+ D +T +++I GL G A KV +++
Sbjct: 328 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 387
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
PDI Y L+ GL + +A +VF M K + ++ Y +++G
Sbjct: 388 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEG 439
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 154/347 (44%), Gaps = 22/347 (6%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T+ + + L + ++ N + M E + + N ++ +LC+ + V +A L ++
Sbjct: 152 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 211
Query: 170 -SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++ I+PN + Y LI C G +AS++ + M ++ P++ + +I+ F K K
Sbjct: 212 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 271
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
EA K+ M +KR D + TY +I+ C ++ +A M E M + D T ++
Sbjct: 272 VEAEKLHDDM-IKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNT 330
Query: 289 IIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+I G R+ + ++ E+ D Y LI+GL A +VF++M+ G
Sbjct: 331 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 390
Query: 345 CEPTMHTYIMLLQGHLGKRGRKGPDPLVNFD--------------TIFVGGLVKAGKSLD 390
P + TY +LL G L G K L FD T + G+ KAGK D
Sbjct: 391 VPPDIMTYSILLDG-LCNNG-KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 448
Query: 391 AAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVG 437
+ +GV+ YN + ++ + + KK++E G
Sbjct: 449 GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 495
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 162/411 (39%), Gaps = 90/411 (21%)
Query: 77 FNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHIMN 135
FN+++ I K + DL ++M R + N T+ I + ++ + M
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 136 DCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW----------------------- 172
G E S+ L+ ++ C K + +A L+ ++ E
Sbjct: 73 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 132
Query: 173 -------------IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMI 219
+PN + YG ++ G C GD+ A + N M E + + + +I
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192
Query: 220 ETFFKINKDDEAMKVFQMMRVKR---------------------------MDDL------ 246
++ K D+A+ +F+ M K + D+
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 252
Query: 247 -GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
L T+ +ID K GK +A + ++M KR I+ D T +S+I G RL +A ++
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312
Query: 306 VEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG--H 359
E + PD+ Y+ LIKG + +R + T++FREM RG TY L+QG H
Sbjct: 313 FEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 372
Query: 360 LG----------KRGRKGPDPLVNFDTIFVGGLVKAG---KSLDAAKYVER 397
G + G P + +I + GL G K+L+ Y+++
Sbjct: 373 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 423
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 131/279 (46%), Gaps = 9/279 (3%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N +TFN ++D K + +M +R + D T+ + L K F
Sbjct: 254 NLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMF 313
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
M C L+ N ++K C+ K V + L ++S + + + Y LI+G
Sbjct: 314 EFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHD 373
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
GD A K++ M +G P I +++ K ++A++VF M+ + L +
Sbjct: 374 GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK-LDIYI 432
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y +I+ MCK GK+ + + + +G++ + +T +++I GL ++ L+EAY ++++++
Sbjct: 433 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 492
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGC 345
+ PD Y+ LI+ LR + ++ REM R C
Sbjct: 493 EDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM--RSC 529
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 89/163 (54%), Gaps = 14/163 (8%)
Query: 210 PSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKIS 265
PSI +K++ K+ K D + + + +M LG+S TY I+I+ C+R +IS
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGE-----KMQRLGISHNLYTYNILINCFCRRSQIS 62
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLI 321
A +L +M K G E +TLSS++ G R+ +A +V+++ +PD + LI
Sbjct: 63 LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 122
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
GL +A EA + M++RGC+P + TY +++ G L KRG
Sbjct: 123 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG-LCKRG 164
>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
Length = 385
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 127/271 (46%), Gaps = 17/271 (6%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N ++ LC+ + EA L+ ++ P+ Y LI G+C +A +++ +
Sbjct: 58 NSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVA 117
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKIS 265
GF P + +I+ K + EA+ +F M TY +I C+ GK+
Sbjct: 118 RGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMD 177
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLI 321
+A +LE M + G D +T ++++ G RL +AY ++ ++ + P++ + L+
Sbjct: 178 EAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLM 237
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG----KRGRK-------GPDP 370
GL R R +A + EM ++ C PT++TY +L G+ + RK P
Sbjct: 238 DGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEEMDCPPN 297
Query: 371 LVNFDTIFVGGLVKAGKSLDAAKYVERVMNR 401
+V+F+ I + GL K +S +A + VE R
Sbjct: 298 VVSFN-IMIRGLCKVNRSSEAMELVEEARRR 327
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 138/289 (47%), Gaps = 6/289 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
++T+N ++ + K+ ++ L+EM + D T+ + + ++ + F
Sbjct: 53 TAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVF 112
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL--SEWIKPNEIAYGWLIKGYCD 189
+ G + + ++ LC+ + EA L ++ S PN + Y LI G+C
Sbjct: 113 EQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCR 172
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
+G + EA + M + G P + ++ F K+ + D+A + M K + +
Sbjct: 173 MGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTP-NVV 231
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK-VVEE 308
T+ ++D +C+ ++S A +L EM ++ T ++I+ G +L EA K ++EE
Sbjct: 232 TFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEE 291
Query: 309 IE-KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
++ P++ ++ +I+GL ++ R+ EA ++ E +R C P + Y ++
Sbjct: 292 MDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVI 340
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 137/286 (47%), Gaps = 13/286 (4%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIM 134
T+ ++ KS+ D +++ R D T+ + L + LK+ ++ F M
Sbjct: 91 TYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRM 150
Query: 135 NDCG-CEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
G C + N ++ C+ + EA L+ +++E P+ + Y L+ G+C +
Sbjct: 151 IKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLAR 210
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
L +A + N MT +G P++ +++ + N+ +A+ + MR K + TY
Sbjct: 211 LDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPT-VYTYN 269
Query: 253 IVIDWMCKRGKISQAYT-MLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK 311
++D C+ ++ +A MLEEM + ++ + +I GL R EA ++VEE +
Sbjct: 270 TILDGYCRVNQLEEARKFMLEEM---DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARR 326
Query: 312 ----PDISLYHGLIKGLLRLRRAREATQVFREMIKR-GCEPTMHTY 352
PD+ +Y +I L R ++ EA +V+R+M++ GC P TY
Sbjct: 327 RRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEEPGCLPNSITY 372
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 121/259 (46%), Gaps = 17/259 (6%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T+ + L + + + M GC + ++ C+ K +A + +L
Sbjct: 56 TYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQL 115
Query: 170 -SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEG-FEPSIDVVDKMIETFFKINK 227
+ +P+ + Y LI G C G L EA ++ M G P+ + +I F ++ K
Sbjct: 116 VARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGK 175
Query: 228 DDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADN 283
DEAM + + RM + G S TY +++ CK ++ AY +L +M ++G+ +
Sbjct: 176 MDEAMNLLE-----RMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNV 230
Query: 284 LTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFRE 339
+T +S++ GL RL +A ++ E+ + P + Y+ ++ G R+ + EA + E
Sbjct: 231 VTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLE 290
Query: 340 MIKRGCEPTMHTYIMLLQG 358
+ C P + ++ ++++G
Sbjct: 291 EMD--CPPNVVSFNIMIRG 307
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 56/136 (41%), Gaps = 17/136 (12%)
Query: 297 GRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
GR V + E P Y+ LI GL + RA EA + EM+ GC P + TY L+
Sbjct: 37 GRRGCGAAVQDAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLI 96
Query: 357 QGHLGKRGRKGPDPLVNFD--------------TIFVGGLVKAGKSLDAAKYVERVMNRG 402
G + +K D L F+ + + GL K G+ +A R++ G
Sbjct: 97 TGFC--KSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSG 154
Query: 403 VEVPR-FDYNKFLHYY 417
+P YN + +
Sbjct: 155 SCMPNTVTYNSLISGF 170
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 73/165 (44%), Gaps = 2/165 (1%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHI 133
+T+ +++ K +D ++ L +M R+ L N TF + L L V+
Sbjct: 196 VTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGE 255
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDL 193
M C ++ N ++ C+ + EA+ +L+ + PN +++ +I+G C V
Sbjct: 256 MRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEEMD-CPPNVVSFNIMIRGLCKVNRS 314
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
EA ++ P + + +I+ + K DEA +V++ M
Sbjct: 315 SEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKM 359
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 150/340 (44%), Gaps = 22/340 (6%)
Query: 109 KTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK 168
K F + + L + EL N F M G ++ N ++ +C+ + A+ L +
Sbjct: 241 KLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRR 300
Query: 169 LSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINK 227
+SE + P+ YG LI+G C VG + +A ++ M G +P+ V +I+ K
Sbjct: 301 MSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGD 360
Query: 228 DDEAMKVFQMMRVK--RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
+ +++ + MR + R D + TY +++ +C+ + A ++ EM G+ D +T
Sbjct: 361 AETMLELHREMRERGVRPDAV---TYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVT 417
Query: 286 LSSIIYGLLARGRLREAYKVVEEIEKPDISL----YHGLIKGLLRLRRAREATQVFREMI 341
+++I G L A ++ + + + L Y LI GL + R+ +A +V EM+
Sbjct: 418 YTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMM 477
Query: 342 KRGCEPTMHTYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSL 389
+ G EP TY M++ L + KG P V + + G K G+
Sbjct: 478 EAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMK 537
Query: 390 DAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEV 429
+A + ++N GV YN L + V EE+
Sbjct: 538 NADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEEL 577
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 142/321 (44%), Gaps = 39/321 (12%)
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYC 188
F+ + D G ++ N +++ L + + A+ + ++ S ++ +++ +I G C
Sbjct: 227 FYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMC 286
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
GDL A + M++ G P + +I+ ++ + ++A VF+ M + M +
Sbjct: 287 RAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAV 346
Query: 249 STYRIVIDWMCKRGKISQAYTMLE---EMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
+ I+ID CK+G A TMLE EM +RG+ D +T ++I+ GL L+ A +
Sbjct: 347 -VFTILIDAHCKKG---DAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGI 402
Query: 306 VEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG 361
V E+ +PD Y LI G + A ++ + M+ G TY
Sbjct: 403 VVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTY--------- 453
Query: 362 KRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN-- 419
T + GL KAG+S DA + + +M G+E Y + +
Sbjct: 454 --------------TALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKG 499
Query: 420 --EEGVVMFEEVGKKLREVGL 438
+ G+ + +E+ K R+ G+
Sbjct: 500 DVKTGLRLLKEMQNKGRKPGV 520
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 113/258 (43%), Gaps = 16/258 (6%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N++ F ++D K + + E +EM R + D T+ + L R+LK
Sbjct: 344 NAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIV 403
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRK---LVVEAKYLILKLSEWIKPNEIAYGWLIKGYC 188
M G ++ C+ + + +E K ++ +E + +E+ Y LI G
Sbjct: 404 VEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMV--AEGVGLDEVTYTALISGLS 461
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
G +A ++ M + G EP +I+ F + +++ + M+ K G+
Sbjct: 462 KAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKP-GV 520
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY ++++ CK G++ A +L M G+ D++T + ++ G G++ + +EE
Sbjct: 521 VTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTD----IEE 576
Query: 309 IEK-----PDISLYHGLI 321
++ PD+ +Y ++
Sbjct: 577 LKSAKGTVPDLGVYTSIV 594
>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Brachypodium distachyon]
Length = 1102
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 154/312 (49%), Gaps = 9/312 (2%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIM 134
++N ++ + ID+ EM R D+ T+ + L + + ++ M+ M
Sbjct: 778 SYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEM 837
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDL 193
+ G E + N ++ L + K++ EA L KL SE P YG L+ G G +
Sbjct: 838 HCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKI 897
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
+A +++ M D G +P+ + + ++ + ++ ++FQ M V + + + +Y +
Sbjct: 898 EDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNM-VDQGINPDIKSYTV 956
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK-- 311
+I +C G+++ + + ++ + G+E D +T + +I+GL GRL EA + ++EK
Sbjct: 957 LIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSG 1016
Query: 312 --PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPD 369
P++ Y+ LI L + +A EA +++ E++K G +P + TY L+ G+ +
Sbjct: 1017 IAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGY--SVSGSTDN 1074
Query: 370 PLVNFDTIFVGG 381
++ + VGG
Sbjct: 1075 AFASYGQMIVGG 1086
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 128/308 (41%), Gaps = 57/308 (18%)
Query: 146 LNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
L+ +++ LC+ K +EA L+ K S + +Y LI G D
Sbjct: 744 LSPLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVD--------------- 788
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
E IDV + + ++ D + TY +++D M K +I
Sbjct: 789 ----ENLIDVAEGLFSEMKRLGCDPDEF-----------------TYNLILDAMGKSMRI 827
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA----YKVVEEIEKPDISLYHGL 320
+ +EM +G E+ +T ++II GL+ L EA YK++ E P Y L
Sbjct: 828 EDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPL 887
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH-LGKRGRK-----------GP 368
+ GLL+ + +A +F EM+ GC+P Y +LL G+ L K G
Sbjct: 888 LDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGI 947
Query: 369 DPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN----EEGVV 424
+P + T+ +G L AG+ D+ Y ++ G+E YN +H EE V
Sbjct: 948 NPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVS 1007
Query: 425 MFEEVGKK 432
+F ++ K
Sbjct: 1008 LFNDMEKS 1015
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 133/312 (42%), Gaps = 41/312 (13%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIM 134
T++ ++ GK R+++ L+EM + N ++ I + L + ++ M
Sbjct: 219 TYSVLMLAFGK-RDVETVVWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKM 277
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDL 193
D GC+ + +++ LC V +AK + K+ + KP+ + Y L+ D GD
Sbjct: 278 EDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYITLLDKCGDNGDS 337
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS---- 249
+IWN M +G+ ++ +++ ++ + DEA VF M+ K ++ S
Sbjct: 338 RSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSL 397
Query: 250 ------------------------------TYRIVIDWMCKRGKISQAYTMLEEMFKRGI 279
TY + I++ K G+ +A E M +GI
Sbjct: 398 ISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINYYGKSGESLKAIKRYELMKSKGI 457
Query: 280 EADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQ 335
D + ++++Y L GRL A +V E++ PD Y +IK + A EA +
Sbjct: 458 VPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMK 517
Query: 336 VFREMIKRGCEP 347
VF EMI+ C P
Sbjct: 518 VFSEMIETRCVP 529
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 87/428 (20%), Positives = 179/428 (41%), Gaps = 52/428 (12%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMG-RRRLVNDKTFKIALMTLAE 120
+ Q Q ++N ++ K+ ++ E M N T+ + + +
Sbjct: 379 FDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINYYGK 438
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIA 179
E K + + +M G + N V+ +L + + AK + +L S + P+ I
Sbjct: 439 SGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNIT 498
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
Y +IK + EA K+++ M + P + V+ +I+T +K + +EA K+F ++
Sbjct: 499 YTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELK 558
Query: 240 VKRMD-----------DLG-----------------------LSTYRIVIDWMCKRGKIS 265
+D LG L TY V+D +CK G+++
Sbjct: 559 EMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVN 618
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK---PDISLYHGLIK 322
A ML M +G D + ++ ++GL+ RL EA+++ +++K PD + ++
Sbjct: 619 YALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMKKVLAPDYTTLCTILP 678
Query: 323 GLLRLRRAREATQVFREMI-KRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVN-------- 373
++ EA +E I + G + ++ L++G L + G +
Sbjct: 679 SFVKNGLMNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAENIALSRIL 738
Query: 374 FDTIFVGGLV----KAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEV 429
D F+ L+ K+ K+L+A + V++ + GV + YN + +E + + E +
Sbjct: 739 LDDFFLSPLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGL 798
Query: 430 GKKLREVG 437
+++ +G
Sbjct: 799 FSEMKRLG 806
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 87/402 (21%), Positives = 173/402 (43%), Gaps = 44/402 (10%)
Query: 67 QPCFAHNSITFNRMVDII---GKSRNIDLFWETLQEMGRRRLV--NDKTFKIALMTLAEV 121
QP H + + N M++++ G+ R++ ++ +Q R++V N TF +L
Sbjct: 105 QPRIVHTTESCNYMLELMRAHGRVRDMAQVFDLMQ----RQIVKANVGTFLTIFRSLGME 160
Query: 122 RELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAK--YLILKLSEWIKPNEIA 179
L+ +M + G + N ++ L + EA Y ++ ++ I P+
Sbjct: 161 GGLRSAPVALPMMKEAGIVLNSYTYNGLIYFLVKSGYDREAMEVYKVMA-TDGIVPSVRT 219
Query: 180 YGWLIKGYCDVGDLIEASKIWNL--MTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQM 237
Y L+ + G + +W L M D G +P++ I + + +EA K+ Q
Sbjct: 220 YSVLMLAF---GKRDVETVVWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQ- 275
Query: 238 MRVKRMDDLG----LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
+M+D G + T ++I +C G++S A + +M + D +T +++
Sbjct: 276 ----KMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYITLLDKC 331
Query: 294 LARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
G R ++ ++ ++ Y ++ L ++ R EA+ VF +M ++G EP
Sbjct: 332 GDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQ 391
Query: 350 HTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVE 396
++Y L+ G L K R GP P +F+ K+G+SL A K E
Sbjct: 392 YSYNSLISGFL-KADRLNHALELFNHMNIHGPTPNGYTYVLFINYYGKSGESLKAIKRYE 450
Query: 397 RVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
+ ++G+ N L+ + + M + V +L+ +G+
Sbjct: 451 LMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGV 492
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 120/299 (40%), Gaps = 42/299 (14%)
Query: 64 QKAQPCFAHNS--ITFNRMVDIIGKSR----NIDLFWETLQEMGRRRLVNDKTFKIALMT 117
QK C + S +T+N ++ + KS+ +DL+++ + E T+ L
Sbjct: 834 QKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPC---TYGPLLDG 890
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPN 176
L + +++ + F M D GC+ + + N ++ + L + + I P+
Sbjct: 891 LLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPD 950
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
+Y LI C G L ++ + +T+ G EP + + +I + + +EA+ +F
Sbjct: 951 IKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFN 1010
Query: 237 MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR 296
M K L TY +I ++ K GK ++A M EE+ K G
Sbjct: 1011 DME-KSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGW----------------- 1052
Query: 297 GRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
KP++ Y+ LI G A + +MI GC P TY+ L
Sbjct: 1053 --------------KPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPNSSTYMQL 1097
>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 701
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 170/394 (43%), Gaps = 60/394 (15%)
Query: 65 KAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEM----GRRRLVNDKTFKIALMTLAE 120
KAQ C + ++ K++ + +T Q M G + V +++ L E
Sbjct: 72 KAQKCPCKEDVALT-VIKAYAKNKMSNKALDTFQNMQDIFGCKPGV--RSYNTLLNAFVE 128
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIA 179
+ E + +F +L+ N ++K C+++ + +A L+ + S+ +KP+ +
Sbjct: 129 LNEWDRAESFSRYFESMDVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFS 188
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
YG LI G VGDL+ A K+++ M+ G + + +I+ FFK D+ ++++ +
Sbjct: 189 YGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLV 248
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
+ TY I+I+ +CK G+ ++ + E M K E D T SS+I+GL G +
Sbjct: 249 KDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNI 308
Query: 300 REAYKVVEEIEKPDISL--------------------------------------YHGLI 321
A +V +EI + + + Y+ LI
Sbjct: 309 DGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQTVVSYNILI 368
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR------------KGPD 369
KGL + EA ++ + K+GC P TY +L+ G L K GR GP
Sbjct: 369 KGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHG-LCKNGRLNKALKIFKEAEDGPG 427
Query: 370 PLVNFD-TIFVGGLVKAGKSLDAAKYVERVMNRG 402
L + + V GL K G+ +A V ++ RG
Sbjct: 428 KLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRG 461
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 167/367 (45%), Gaps = 18/367 (4%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEV 121
Y + + +++T N M++ ++ I +E MG+ ++ I + L E
Sbjct: 315 YKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQTVVSYNILIKGLFEN 374
Query: 122 RELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWI-KPNEIAY 180
++++ ++ + ++ GC ++ LC+ + +A + + + K + AY
Sbjct: 375 GKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAY 434
Query: 181 GWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
++ G C G + EA I N M G++ V + +I F + +K ++A+ F+ M
Sbjct: 435 SSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMEC 494
Query: 241 KRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
K + +Y +I +CK + S+AY+ ++EM ++ + D +T S ++ GL ++
Sbjct: 495 KGCSPT-IVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIE 553
Query: 301 EAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
A + ++ KPDI++Y+ L+ GL + + +A Q++ M + C P + T L+
Sbjct: 554 MALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLM 613
Query: 357 QGHLGKRG------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVE 404
+G R + G P + I + GL + DA +++ +NRG+
Sbjct: 614 EGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGIL 673
Query: 405 VPRFDYN 411
+N
Sbjct: 674 PTAVTWN 680
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 134/291 (46%), Gaps = 41/291 (14%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N +T+N M++ + K D E + M + D T+ + L E + V
Sbjct: 256 NVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAV--- 312
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVG 191
+V K + + LVV+A + + ++ G+C G
Sbjct: 313 ----------------RVYKEIVESSLVVDA---------------VTHNAMLNGFCRAG 341
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTY 251
+ E+ ++W +M E + + + +I+ F+ K +EA+ +++++ K+ +TY
Sbjct: 342 KIKESFELWMVMGKENCQTVVSY-NILIKGLFENGKVEEAISIWELL-CKKGCRPESTTY 399
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK 311
++I +CK G++++A + +E + D SS++ GL GR+ EA +V +++K
Sbjct: 400 GVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDK 459
Query: 312 P----DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
D + + LI G +R + +A FREM +GC PT+ +Y L++G
Sbjct: 460 RGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKG 510
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 121/298 (40%), Gaps = 44/298 (14%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVNFF 131
++ ++ MVD + K +D + +M +R D L+ +L+ +NFF
Sbjct: 430 DAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFF 489
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL--SEWIKPNEIAYGWLIKGYCD 189
M GC ++ N ++K LC+ + EA + ++ EW KP+ I L+ G C
Sbjct: 490 REMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEW-KPDMITCSLLMDGLCQ 548
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
+ A +W D+GF+P I +
Sbjct: 549 EKKIEMALNLWQQALDKGFKPDI------------------------------------T 572
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
Y I++ +C K+ A + M + + +T ++++ GL +A ++ + I
Sbjct: 573 MYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCI 632
Query: 310 EK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
K PDI Y+ IKGL R +A + + + RG PT T+ +L++ + R
Sbjct: 633 LKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILPTAVTWNILVRAAVNFR 690
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 97/218 (44%), Gaps = 37/218 (16%)
Query: 207 GFEPSIDVVDKMIETFFKINKDDEA---MKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGK 263
G +P + + ++ F ++N+ D A + F+ M V L TY I+I CK+ +
Sbjct: 111 GCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESMDVSP----NLQTYNILIKISCKKQQ 166
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHG 319
I +A ++L+ M+ + ++ D + ++I G++ G L A KV +E+ D++ Y+
Sbjct: 167 IEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNM 226
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCE--PTMHTYIMLLQGHLGKRGRKGPDPLVNFDTI 377
LI G + + +++ ++K C P + TY I
Sbjct: 227 LIDGFFKHGDYDKGKEIWERLVK-DCSVYPNVVTY-----------------------NI 262
Query: 378 FVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
+ GL K G+ ++ + ER+ E F Y+ +H
Sbjct: 263 MINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIH 300
>gi|116789117|gb|ABK25122.1| unknown [Picea sitchensis]
Length = 572
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 157/354 (44%), Gaps = 12/354 (3%)
Query: 10 RVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPC 69
+V +I P ++L C F + ++ + + FQ+ +QP
Sbjct: 110 KVLSITKDLHSLPIEEARTALDDCGFIPSPNLVQKLLRRLQYDGKAAFRVFQWA-GSQPD 168
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
++H ++ M+ I+G R D W +++M R +VN +T I + A + +K +
Sbjct: 169 YSHTVSVYHTMISILGVHRKFDKGWGLIRKMHERAMVNRQTLMIMIKRYAAAHDARKAIK 228
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEI-AYGWLIKGYC 188
FH M+ + ++ LC+ V EA+ LI ++ P E ++ ++ G+C
Sbjct: 229 TFHAMDKFKLAADSDDFLCLLCALCRNMFVEEAEELI-HFNKKCYPLETKSFNVILYGWC 287
Query: 189 DVG-DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
++ D+ + ++W M++ P +I F K K + ++++ M+ K
Sbjct: 288 NIFVDVYQVKRLWEEMSNLCITPDAFSYTTVICCFSKAGKFYDVVRLYDEMKKKGFTP-N 346
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY---- 303
L Y VI + K + +A + ++ + G + +T + +IY L + EAY
Sbjct: 347 LKVYNAVIYVLSKERCVKEALNLFNKIREMGFHPNAVTYTYLIYLLCRTWKPEEAYSYLD 406
Query: 304 KVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
K++ E P I +YH + + ++F +M + GC PTM TYIM ++
Sbjct: 407 KMIMEGFVPTIDIYHAFFRF---VENEGAICKLFDKMFENGCAPTMETYIMSIR 457
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 107/255 (41%), Gaps = 15/255 (5%)
Query: 69 CFAHNSITFNRMV----DIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRE 123
C+ + +FN ++ +I + WE EM + D ++ + ++ +
Sbjct: 271 CYPLETKSFNVILYGWCNIFVDVYQVKRLWE---EMSNLCITPDAFSYTTVICCFSKAGK 327
Query: 124 LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGW 182
+V + M G +L++ N V+ L + + V EA L K+ E PN + Y +
Sbjct: 328 FYDVVRLYDEMKKKGFTPNLKVYNAVIYVLSKERCVKEALNLFNKIREMGFHPNAVTYTY 387
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM-KVFQMMRVK 241
LI C EA + M EGF P+ID+ FF+ +++ A+ K+F M +
Sbjct: 388 LIYLLCRTWKPEEAYSYLDKMIMEGFVPTIDIY----HAFFRFVENEGAICKLFDKM-FE 442
Query: 242 RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
+ TY + I C A+ + +M K AD+ ++ G L G+ E
Sbjct: 443 NGCAPTMETYIMSIRRCCSWSDYENAFKLWNDMEKHWFSADSSIHYLLLNGFLLNGKPEE 502
Query: 302 AYKVVEEIEKPDISL 316
A K E++ SL
Sbjct: 503 ACKCYREMKVNGFSL 517
>gi|224133408|ref|XP_002321560.1| predicted protein [Populus trichocarpa]
gi|222868556|gb|EEF05687.1| predicted protein [Populus trichocarpa]
Length = 491
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/410 (23%), Positives = 176/410 (42%), Gaps = 26/410 (6%)
Query: 26 LHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIG 85
LHS L + ++ N+ P + + FF P ++H+ +++ +DI
Sbjct: 58 LHSPTIQWTPQLVNTILKRLWNDGPKALQ----FFNLLSH-HPSYSHHPSSYDHAIDISA 112
Query: 86 KSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLE 144
+ R+ + M RL KTF I A + + V F M+ GC L+
Sbjct: 113 RLRDSPSLRSLVYRMRSARLGPTPKTFAIIAERYASAGKPHRAVKVFLSMHQFGCFQDLQ 172
Query: 145 MLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
N ++ LC+ K V A L + + ++Y ++ G+C + +A ++ M
Sbjct: 173 SFNTILDVLCKSKRVEMAYNLFKVFKGKFRADCVSYNVMVNGWCLIKRTNKALEMLKEMV 232
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
G P++ + M++ +F+ + +EA F M+ KR ++ + TY VI G+I
Sbjct: 233 KRGLTPNLTSYNTMLKGYFRAGQINEAWDFFLEMK-KRDCEIDVITYTTVIHGFGVAGEI 291
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGL 320
+A + + M K+G+ T ++ I L + + A + EE+ P+ Y+ +
Sbjct: 292 KRARKVFDTMVKKGVLPSVATYNAFIQVLCKKDNVDNAIVIFEEMVVKGYVPNSITYNLV 351
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL-----QGHLGK-----RGRKGPDP 370
I+GL A + M GCEP + TY +++ +G + K + D
Sbjct: 352 IRGLCHRGEMERAMEFMGRMKDDGCEPNVQTYNLVIRYFCDEGEIDKALDLFQKMTSGDC 411
Query: 371 LVNFDT--IFVGGLVKAGKSLD---AAKYVERVMNRGVEVPRFDYNKFLH 415
L N DT I + + KS D A + +++RG +F +N+ L+
Sbjct: 412 LPNLDTYNILISAMFVRKKSDDLLVAGNLLIEMVDRGFVPRKFTFNRVLN 461
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 104/234 (44%), Gaps = 14/234 (5%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
N ++N M+ ++ I+ W+ EM +R ++ T+ + E+K+ F
Sbjct: 239 NLTSYNTMLKGYFRAGQINEAWDFFLEMKKRDCEIDVITYTTVIHGFGVAGEIKRARKVF 298
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIK----PNEIAYGWLIKGY 187
M G S+ N ++ LC++ V A I+ E + PN I Y +I+G
Sbjct: 299 DTMVKKGVLPSVATYNAFIQVLCKKDNVDNA---IVIFEEMVVKGYVPNSITYNLVIRGL 355
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL- 246
C G++ A + M D+G EP++ + +I F + D+A+ +FQ M D L
Sbjct: 356 CHRGEMERAMEFMGRMKDDGCEPNVQTYNLVIRYFCDEGEIDKALDLFQKMTSG--DCLP 413
Query: 247 GLSTYRIVIDWMCKRGKISQ---AYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
L TY I+I M R K A +L EM RG T + ++ GLL G
Sbjct: 414 NLDTYNILISAMFVRKKSDDLLVAGNLLIEMVDRGFVPRKFTFNRVLNGLLLTG 467
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 35/229 (15%)
Query: 210 PSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAY 268
P+ + E + K A+KVF M + DL ++ ++D +CK ++ AY
Sbjct: 134 PTPKTFAIIAERYASAGKPHRAVKVFLSMHQFGCFQDL--QSFNTILDVLCKSKRVEMAY 191
Query: 269 TMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGL 324
+ + +FK AD ++ + ++ G R +A ++++E+ K P+++ Y+ ++KG
Sbjct: 192 NLFK-VFKGKFRADCVSYNVMVNGWCLIKRTNKALEMLKEMVKRGLTPNLTSYNTMLKGY 250
Query: 325 LRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVK 384
R + EA F EM KR CE + TY T + G
Sbjct: 251 FRAGQINEAWDFFLEMKKRDCEIDVITY-----------------------TTVIHGFGV 287
Query: 385 AGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGV----VMFEEV 429
AG+ A K + ++ +GV YN F+ ++ V V+FEE+
Sbjct: 288 AGEIKRARKVFDTMVKKGVLPSVATYNAFIQVLCKKDNVDNAIVIFEEM 336
>gi|357138018|ref|XP_003570595.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Brachypodium distachyon]
Length = 548
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/412 (22%), Positives = 174/412 (42%), Gaps = 32/412 (7%)
Query: 28 SSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIG-- 85
++L + LT + + + + FF + + Q + H+ +N ++D +
Sbjct: 94 AALDALGAELTTPLVSDVMHRLRYEEKLAFRFFAWASQ-QDNYEHDQAAYNEVIDTLSGT 152
Query: 86 --KSRNIDLFWETLQEMGRRRL----VNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGC 139
K+R + + L M R R V D + T + L+K+ +
Sbjct: 153 RYKARQFGVLCDVLDHMKRHRTRSVPVEDLLAILRAYTEKHLTNLRKLAKKRRVRMRTPP 212
Query: 140 EYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKI 199
E + LN ++ C+ +V EA+ + ++ ++ N Y L G+C D +A K+
Sbjct: 213 E--TDALNILLDAFCKCGMVREAETVFGRVKRKLQGNAETYNILFFGWCRARDPKKAMKV 270
Query: 200 WNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK--RMDDLGLSTYRIVIDW 257
M P I++F EA ++F+ MR + + Y ++I
Sbjct: 271 LEEMILMKHAPESFTYIAAIDSFCSAGLVSEAKELFEFMRTEGSSISSPTAKAYSVMIVA 330
Query: 258 MCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PD 313
+ K ++ + ++ +M K G D T +I G+ ++ AY V+EE+ K PD
Sbjct: 331 LVKADRMDDCFELISDMIKLGCMPDVSTFKDLIEGMCLVDKIDTAYFVLEEMGKAGFPPD 390
Query: 314 ISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR---------- 363
I Y+ ++ L L++A +A ++ MI+ CEP++HTY ML+ R
Sbjct: 391 IVTYNCFLEVLCNLQKADDALKLCERMIEAHCEPSVHTYNMLMVMFFQMREPHRALDIWL 450
Query: 364 --GRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
++G V+ I + GL G++ DA ++ V+N + + Y KF
Sbjct: 451 EMDKRGCRRAVDTYEIMIDGLFDCGRTEDATNLLDEVINHDM---KLSYKKF 499
>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Brachypodium distachyon]
Length = 966
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 160/370 (43%), Gaps = 39/370 (10%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFF 131
N+ F+R + +GK + ++ L+EM R+ V D T+ + L + ++++K F
Sbjct: 419 NTANFSRCLCGVGK---FEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLF 475
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
M G + ++ + C+ L+ +A+ ++ S PN + Y L+ Y
Sbjct: 476 QEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKS 535
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM-----------R 239
LI+A I++ M D P+ +I+ K + +A +V++ +
Sbjct: 536 KQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFY 595
Query: 240 VKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
+ D ++ TY +ID +CK K+S A+ +L+ M G E + + ++I G
Sbjct: 596 FEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCK 655
Query: 296 RGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
G++ A +V + K P + Y LI + + R A +V EM+ C P + T
Sbjct: 656 IGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVT 715
Query: 352 YIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERV 398
Y ++ G L K G KG P V T + GL K GK+ DA+ + +
Sbjct: 716 YTAMIDG-LSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKA-DASLKLFKQ 773
Query: 399 MNRGVEVPRF 408
MN P +
Sbjct: 774 MNSKGCAPNY 783
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 126/287 (43%), Gaps = 53/287 (18%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
N++T++ ++D + K+ I E +++ + T V +F+
Sbjct: 556 NAVTYSALIDGLCKAGEIQKACEVYEKL--------------IGTSGNVES-----DFYF 596
Query: 133 IMND-CGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDV 190
ND C ++ ++ LC+ + V +A L+ L+ +PN+I Y LI G+C +
Sbjct: 597 EGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKI 656
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G + A +++ MT G+ PS+ +I+ FK + D AMKV M + + + T
Sbjct: 657 GKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEM-LNDSCNPNVVT 715
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y +ID + K G+I +A +L M ++G + +T
Sbjct: 716 YTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVT------------------------- 750
Query: 311 KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
Y LI GL + +A + ++F++M +GC P TY +L+
Sbjct: 751 ------YTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLIN 791
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 95/473 (20%), Positives = 178/473 (37%), Gaps = 110/473 (23%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKT----FKIALMT----------- 117
+++T+N +V ++ + +++ + +EM D++ F AL
Sbjct: 203 SAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQALCKVGRWADALNML 262
Query: 118 ------------------LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLV 159
L E + ++F H M C ++ ++ ++K
Sbjct: 263 EKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQF 322
Query: 160 VEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPS------- 211
K +I + ++E PN + L+ GYC+ GD A K++N MT G P
Sbjct: 323 GWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIF 382
Query: 212 ---------------IDVVDKMIETFFK----INKDDEAM------------KVFQ---- 236
+D+V+K+ E +NK + A K FQ
Sbjct: 383 IGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKE 442
Query: 237 MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR 296
MMR + D STY VI ++C+ K+ +++ + +EM + G+ D T + +I
Sbjct: 443 MMRKGFVPD--TSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKA 500
Query: 297 GRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
G + +A +E+ P++ Y L+ L+ ++ +A +F M+ C P TY
Sbjct: 501 GLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTY 560
Query: 353 IMLLQG----------------HLGKRGRKGPD------------PLVNFDTIFVGGLVK 384
L+ G +G G D P V + GL K
Sbjct: 561 SALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCK 620
Query: 385 AGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVG 437
A K DA + ++ ++ G E + Y+ + + + +EV ++ + G
Sbjct: 621 AQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCG 673
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 124/276 (44%), Gaps = 24/276 (8%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK------TFKIALMTLAEVRELKKMVN 129
T+ ++D + K +DL + L EM +ND T+ + L++V E++K +N
Sbjct: 680 TYTSLIDRMFKDGRLDLAMKVLSEM-----LNDSCNPNVVTYTAMIDGLSKVGEIEKALN 734
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYC 188
+M + GC ++ ++ L + + L ++ S+ PN + Y LI C
Sbjct: 735 LLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCC 794
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
G L EA + + M + + ++ F K K ++ + + M +
Sbjct: 795 AAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSK--KFIASLGLLEEMESHETVPIA- 851
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT----LSSIIYGLLARGRLREAYK 304
Y ++ID K G++ A + +E+ + + N+T +S+I L ++ EA+
Sbjct: 852 PVYGMLIDSFSKAGRLETALELHKELVEVS-SSLNMTSTGMYASLIQALCLASQVEEAFT 910
Query: 305 VVEEIEK----PDISLYHGLIKGLLRLRRAREATQV 336
+ E+ + PD+ ++ L+KGL+ + + EA Q+
Sbjct: 911 LYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQL 946
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 78/210 (37%), Gaps = 22/210 (10%)
Query: 229 DEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNL 284
DEA++ + R+ D G TY ++ + G++ + + +EM G D
Sbjct: 186 DEALE-----ELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRS 240
Query: 285 TLSSIIYGLLARGRLREAYKVVEEIE-KPDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
T+ L GR +A ++E+ + D L +I GL+ EA M
Sbjct: 241 TIGYFAQALCKVGRWADALNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCN 300
Query: 344 GCEPTMHTYIMLLQGHLGKRG------------RKGPDPLVNFDTIFVGGLVKAGKSLDA 391
C P + TY LL G L K+ +G +P + V G AG A
Sbjct: 301 SCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYA 360
Query: 392 AKYVERVMNRGVEVPRFDYNKFLHYYSNEE 421
K R+ G YN F+ +E
Sbjct: 361 YKLFNRMTTCGSPPGYVAYNIFIGSICGQE 390
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 74/185 (40%), Gaps = 16/185 (8%)
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
L++ C G EA + + D G+ PS + +++ + + +V K
Sbjct: 175 LVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRV-----QKE 229
Query: 243 MDDLGLSTYRIVIDW----MCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR 298
M G R I + +CK G+ + A MLE K D + + +I GL+
Sbjct: 230 MSASGFCMDRSTIGYFAQALCKVGRWADALNMLE---KEDFNLDTVLCTQMISGLMEASL 286
Query: 299 LREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIM 354
EA + + P++ Y L+ G L+ ++ ++ M+ GC P +
Sbjct: 287 FNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNS 346
Query: 355 LLQGH 359
L+ G+
Sbjct: 347 LVHGY 351
>gi|116787233|gb|ABK24422.1| unknown [Picea sitchensis]
Length = 504
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 161/363 (44%), Gaps = 31/363 (8%)
Query: 72 HNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFF 131
H+ + +N +VD++G + D W+ ++ M + +V+ +T + ++ + F
Sbjct: 110 HSPLAWNLLVDLLGSDKLFDAMWDCIKIMKNQGIVSTETLSSVFGNYVQAGKVDEARMTF 169
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVG 191
+M GC + LN + LC+ K V A + E I P+ Y L++G+ G
Sbjct: 170 EVMEQYGCRQDVVALNCYISALCRYKQVKAALEFFDSVKERIAPDADTYALLLEGWEIEG 229
Query: 192 DLIEA-SKIWNLMTDEGFEP-SIDVVDKMIETFFKINKDDEAMKVFQMMRVKR-MDDLGL 248
++ A S ++ G+ P + + + T + DEA+K +M+ K+ + DLG
Sbjct: 230 NVSNARSTFGEMIARLGWMPNNTSAYNAFLSTLVNGFQVDEALKYLGVMKTKKCLPDLGF 289
Query: 249 STYRIVIDWMCKRGKISQAY------TMLEEMFKRGIEADNLTLSSIIYGLLARG---RL 299
+R + + +R + + Y ++ E M + GI D T +++I G+ ++
Sbjct: 290 --FRNTLQILYQRKAMKEPYGLWQLMSLWEFMRQSGIVPDLPTYNTMI-GVCCSANPIQV 346
Query: 300 REAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
AY +++E+ PD Y+ + + + R+ EA+ +FREM K P Y+M
Sbjct: 347 NSAYSLLDEMALTGAFPDSKTYNTIFEAFITARKVEEASSIFREMTKNEFCPLYANYVMA 406
Query: 356 LQGHLGKRG------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
++ + +K P + I + G + G+ A KY + RGV
Sbjct: 407 IKMYFEADDSEMAVMMWRHMIQKAIFPKSDCAAILIDGFLDLGRVSAALKYSLEAITRGV 466
Query: 404 EVP 406
++P
Sbjct: 467 QIP 469
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 136/299 (45%), Gaps = 18/299 (6%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEA 196
GC+ L +LN + + + V + + + + + P+ +Y LI G G E
Sbjct: 389 GCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARET 448
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVID 256
S I++ M +GF + +++ F K K +A ++ + M+ K + ++TY ++D
Sbjct: 449 SNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPT-VATYGAIVD 507
Query: 257 WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----P 312
+ K ++ +AY + EE +GIE + + SS+I G GR+ EAY ++EE+ K P
Sbjct: 508 GLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTP 567
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG-------- 364
++ ++ L+ L++ EA F+ M + C P +TY +L+ G +
Sbjct: 568 NVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFW 627
Query: 365 ----RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN 419
++G P V T + GL K G DA ER G +N + SN
Sbjct: 628 QDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSN 686
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/419 (22%), Positives = 175/419 (41%), Gaps = 88/419 (21%)
Query: 69 CFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMV 128
C + + +N +D GK+ N+D+
Sbjct: 110 CLEPDIVLYNVCIDCFGKAGNVDM----------------------------------AC 135
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGY 187
FFH + G + ++ LC+ + EA+ L ++ +E P AY +I GY
Sbjct: 136 KFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGY 195
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
G +A K+ + + G PS+ + ++ K K DEA+ +F++M K+ +
Sbjct: 196 GSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM--KKDAEPN 253
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEM--------------------------------- 274
STY I+ID +C G++ +AY +L+EM
Sbjct: 254 SSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFE 313
Query: 275 --FKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLR 328
+RG D +T S+I GL +G++ EAY++ E++ + +Y LI+
Sbjct: 314 SASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHG 373
Query: 329 RAREATQVFREMIKRGCEPT---MHTYI-MLLQGHLGKRGRK--------GPDPLVNFDT 376
R + +VF+E+I+RGC+P ++TY+ + + ++GR G P V +
Sbjct: 374 RKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYS 433
Query: 377 IFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLRE 435
I + GL KAG++ + + + +G + YN + + V E+ ++++E
Sbjct: 434 ILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKE 492
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 145/341 (42%), Gaps = 44/341 (12%)
Query: 58 LFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALM 116
LF + A+P NS T+N ++D++ ++ + L EM L N T I +
Sbjct: 242 LFEVMKKDAEP----NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVD 297
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKP 175
L + R+L++ F + GC ++ L ++ V EA L K L
Sbjct: 298 RLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNA 357
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
N + Y LI+ + G + K++ + G +P + +++ ++ FK + ++ +F
Sbjct: 358 NPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIF 417
Query: 236 QMMR------------------------------VKRMDDLGLS----TYRIVIDWMCKR 261
+ +R M G + Y V+D CK
Sbjct: 418 EDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKS 477
Query: 262 GKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDIS----LY 317
GK+ +AY +LEEM ++ ++ T +I+ GL RL EAY + EE + I LY
Sbjct: 478 GKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLY 537
Query: 318 HGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
LI G ++ R EA + EM+K+G P ++T+ LL
Sbjct: 538 SSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDA 578
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 166/377 (44%), Gaps = 26/377 (6%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIM 134
++FN ++ +GK R +D + M + N T+ I + L +++ M
Sbjct: 221 VSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEM 280
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDL 193
+L +N +V LC+ + + EA + S+ P+ + Y LI G G +
Sbjct: 281 EHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQV 340
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
EA +++ M D G + V +I FF + ++ KVF+ + ++R L+
Sbjct: 341 DEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKEL-IRRGCKPDLTLLNT 399
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPD 313
+D + K G++ + + E++ G D + S +I+GL G+ RE + +++
Sbjct: 400 YMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQG 459
Query: 314 ISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR---- 365
+L Y+ ++ G + + +A ++ EM ++ +PT+ TY ++ G L K R
Sbjct: 460 FALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDG-LAKIDRLDEA 518
Query: 366 ---------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHY 416
KG + V + + G K G+ +A +E +M +G+ + +N L
Sbjct: 519 YMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLL-- 576
Query: 417 YSNEEGVVMFEEVGKKL 433
+ +V EE+ + L
Sbjct: 577 ----DALVKAEEINEAL 589
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 134/303 (44%), Gaps = 46/303 (15%)
Query: 77 FNRMVDIIGKSRNID---LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHI 133
N +D + K+ ++ + +E ++ G L + +++ I + L + + ++ N FH
Sbjct: 397 LNTYMDCVFKAGEVEKGRMIFEDIRSYGF--LPDVRSYSILIHGLTKAGQARETSNIFHA 454
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL------------------------ 169
M G N VV C+ V +A ++ ++
Sbjct: 455 MKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDR 514
Query: 170 ------------SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDK 217
S+ I+ N + Y LI G+ VG + EA I M +G P++ +
Sbjct: 515 LDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNS 574
Query: 218 MIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKR 277
+++ K + +EA+ FQ M+ + TY I+I+ +C+ K ++A+ ++M K+
Sbjct: 575 LLDALVKAEEINEALVCFQSMKEMKCPP-NTYTYSILINGLCRVQKYNKAFVFWQDMQKQ 633
Query: 278 GIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREA 333
G+ + +T +++I GL G + +AY + E + PD + ++ LI+G+ RA EA
Sbjct: 634 GLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEA 693
Query: 334 TQV 336
Q
Sbjct: 694 YQT 696
>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 186/391 (47%), Gaps = 28/391 (7%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALMTLAEVRELKKMVNFF 131
N + ++ ++D + ++ +D +E EM G N+ T+ + L V + +
Sbjct: 184 NVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLV 243
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
M G + S+ + ++ LC+ ++VEA+ + ++ + +PN + L+ GYC
Sbjct: 244 DEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLK 303
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLS 249
G++ A ++++ + + GF+ + + I + K+ + +A++VF +M R + + +
Sbjct: 304 GNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPN--IV 361
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY----KV 305
TY +ID +CK G++S A+ +++ M + G+ D +T ++ GL RL +A ++
Sbjct: 362 TYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQL 421
Query: 306 VEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
VE PD+ Y LI G RR EA + R+M + P + TY L+ G L + GR
Sbjct: 422 VESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDG-LCRSGR 480
Query: 366 -------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYV-ERVMNRGVEVPRFDYN 411
KGP P +I + L K + LD A ++ +++ RG+E Y
Sbjct: 481 ISNAWRLLNEMHVKGPLPDTITYSILLDALWKK-QHLDEAVFLFNQMIKRGLEPDVMCYT 539
Query: 412 KFLHYYSNEEGVVMFEEVGKKLREVGLADLA 442
+ Y E + +E RE+ + +L
Sbjct: 540 IMIDGYCKSERI---DEAINLFREMHMKNLV 567
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 123/276 (44%), Gaps = 7/276 (2%)
Query: 89 NIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLN 147
N+D+ E +G D T+ + + +V ++ V F M G ++ N
Sbjct: 305 NVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYN 364
Query: 148 KVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDE 206
++ LC+ V A ++ + + P+ + L+ G C L +A ++N + +
Sbjct: 365 SLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVES 424
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQ 266
G P + +I + EAM + + M +K + + TY +ID +C+ G+IS
Sbjct: 425 GLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVP-HIVTYSCLIDGLCRSGRISN 483
Query: 267 AYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIK 322
A+ +L EM +G D +T S ++ L + L EA + ++ K PD+ Y +I
Sbjct: 484 AWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMID 543
Query: 323 GLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
G + R EA +FREM + P + TY +L
Sbjct: 544 GYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNA 579
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 133/313 (42%), Gaps = 49/313 (15%)
Query: 146 LNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
LN V+K LC V++A ++ ++ NE++YG LI G C+ G + EA NL+
Sbjct: 110 LNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLCENGRVNEAV---NLL- 165
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
+MIE + KD +K +M Y IVID +C+ G +
Sbjct: 166 ------------RMIEKEKEKEKDGFFVKGNVVM------------YSIVIDCLCRNGFV 201
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP--DISLY--HGL 320
+ + EM G+ + T S+I GL G+ E + +V+E+ + D+S+Y L
Sbjct: 202 DEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVL 261
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTI--- 377
I GL + EA ++F EM+ RG EP + T L+ G+ K L FD I
Sbjct: 262 IDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMAREL--FDAIGEW 319
Query: 378 -----------FVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMF 426
F+ G K G+ DA + + + GV YN + V
Sbjct: 320 GFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGA 379
Query: 427 EEVGKKLREVGLA 439
E+ K + GL
Sbjct: 380 WEIVKTMHRSGLT 392
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 112/245 (45%), Gaps = 6/245 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFF 131
N +T+N ++D + K+ + WE ++ M R L D T I L L + + L + + F
Sbjct: 359 NIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLF 418
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDV 190
+ + + G + ++ C + + EA L+ + + + P+ + Y LI G C
Sbjct: 419 NQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRS 478
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G + A ++ N M +G P +++ +K DEA+ +F M +KR + +
Sbjct: 479 GRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQM-IKRGLEPDVMC 537
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK---VVE 307
Y I+ID CK +I +A + EM + + D +T + + + G +K V+
Sbjct: 538 YTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGSNSYEWKFVNVIR 597
Query: 308 EIEKP 312
+I P
Sbjct: 598 DINPP 602
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 104/289 (35%), Gaps = 59/289 (20%)
Query: 209 EPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAY 268
S+ +K + K N+ A+ +F + T I+I G +S ++
Sbjct: 33 HSSLAHFNKHLTCLMKTNQHSTAIALFNQNEYNNFITPCIITLTIIITCFFHLGHVSFSF 92
Query: 269 TMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISL----YHGLIKGL 324
++ ++ KRG D + L++++ GL G + +A + +EI SL Y LI GL
Sbjct: 93 SIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGL 152
Query: 325 LRLRRAREATQVFR-------------------------------------------EMI 341
R EA + R EM+
Sbjct: 153 CENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMM 212
Query: 342 KRGCEPTMHTYIMLLQGHLG------------KRGRKGPDPLVNFDTIFVGGLVKAGKSL 389
G P TY L++G G + R+G D V T+ + GL K G +
Sbjct: 213 GNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLV 272
Query: 390 DAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
+A + + ++NRG E + Y + V M E+ + E G
Sbjct: 273 EAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGF 321
>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
Length = 333
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 140/286 (48%), Gaps = 18/286 (6%)
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M CGC + N ++ LC+ + +++A+ L+ ++ E + P+ + LI GYC G
Sbjct: 42 MVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGK 101
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
L +A ++++ M ++ P I + +I+ + D+A ++ M + + + TY
Sbjct: 102 LDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHV-TYS 160
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
I+ID C++G++ A+ L+EM +GI + +T +SII G G + + K ++++
Sbjct: 161 ILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVN 220
Query: 311 --KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH--------- 359
PD+ Y+ LI G ++ + +A ++ M K +P + TY ML+ G
Sbjct: 221 KVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEA 280
Query: 360 ---LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
K KG +P + G V AG S +A + + ++ RG
Sbjct: 281 GWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 326
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 129/279 (46%), Gaps = 7/279 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHI 133
+T+N +++ + K R + L EM R + D TF + +L K + F
Sbjct: 52 VTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDT 111
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGD 192
M + + N ++ +C++ + +A L + S I PN + Y LI +C+ G
Sbjct: 112 MLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQ 171
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ +A + M ++G P+I + +I+ + + + K Q M V ++ L TY
Sbjct: 172 VEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSP-DLITYN 230
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
+I K K+ A+ +L M K ++ D +T + +I G G ++EA + E++
Sbjct: 231 TLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAK 290
Query: 311 --KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
+PD Y +I G + ++EA Q+ EM++RG P
Sbjct: 291 GIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAP 329
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 109/263 (41%), Gaps = 52/263 (19%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+ + Y +I G+C G + +A ++ + M G P DVV
Sbjct: 14 PDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLP--DVV------------------- 52
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
TY +++ +CK ++ A +L EM +RG+ D T +++I+G
Sbjct: 53 ---------------TYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYC 97
Query: 295 ARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
G+L +A ++ + + +PDI Y+ LI G+ R +A ++ +M R P
Sbjct: 98 IEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHV 157
Query: 351 TYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERV 398
TY +L+ H L + KG P + + G ++G K+++++
Sbjct: 158 TYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKM 217
Query: 399 MNRGVEVPRFDYNKFLHYYSNEE 421
M V YN +H Y E+
Sbjct: 218 MVNKVSPDLITYNTLIHGYIKED 240
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 97/211 (45%), Gaps = 3/211 (1%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHI 133
+T+N ++D + + ++D + +M R + N T+ I + + E +++ F
Sbjct: 122 VTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDE 181
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDVGD 192
M + G ++ N ++K C+ V + K+L + + P+ I Y LI GY
Sbjct: 182 MINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDK 241
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ +A K+ N+M E +P + + +I F EA +F+ M K ++ TY
Sbjct: 242 MHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEP-DRYTYM 300
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADN 283
+I+ G +A+ + +EM +RG D+
Sbjct: 301 SMINGHVTAGNSKEAFQLHDEMLQRGFAPDD 331
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 106/443 (23%), Positives = 198/443 (44%), Gaps = 55/443 (12%)
Query: 13 TILYQQQYSPESRLHSSLSSCN-----FNLTHEFFLQICNNFPLSWRPVYL----FFQYT 63
+++YQ L SLS CN L E FL C ++ V L F +
Sbjct: 246 SVIYQT-------LIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRIN 298
Query: 64 QKAQPC-------FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALM 116
+ A+ F + IT+ +++ + K +D + + + V T +
Sbjct: 299 EAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPTSVIFNTLIHGFV 358
Query: 117 TLAEVRE----LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SE 171
T + + L MV + I+ D C Y N ++ ++ LV A ++ + ++
Sbjct: 359 THGRLDDAKAVLSDMVTSYGIVPDV-CTY-----NSLIYGYWKKGLVGLALEVLRDMRNK 412
Query: 172 WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEA 231
KPN +Y L+ G+C +G + EA + N M+ +G +P+ + +I F K ++ EA
Sbjct: 413 GCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEA 472
Query: 232 MKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
+++F+ M K + T+ +I +C+ +I A +L +M G+ A+ +T +++I
Sbjct: 473 VEIFREMPRKGCKP-DVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLIN 531
Query: 292 GLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
L RG ++EA K+V E+ D Y+ LIKGL R +A +F +M++ G P
Sbjct: 532 AFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVP 591
Query: 348 TMHTYIMLLQGHLGKRGR-------------KGPDP-LVNFDTIFVGGLVKAGKSLDAAK 393
+ + +L+ G L + G +G P +V F+++ + GL +AG+ D
Sbjct: 592 SSISCNILING-LCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSL-INGLCRAGRIEDGLT 649
Query: 394 YVERVMNRGVEVPRFDYNKFLHY 416
++ G+ YN + +
Sbjct: 650 MFRKLQAEGIPPDTVTYNTLMSW 672
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 99/417 (23%), Positives = 174/417 (41%), Gaps = 34/417 (8%)
Query: 43 LQICN--NFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEM 100
Q+C PL F +T +Q + H+ + ++ +G + L +M
Sbjct: 73 FQLCKLLELPLDVSTSMELFSWT-GSQKGYRHSFDVYQVLIGKLGSNGEFKTIDRLLMQM 131
Query: 101 GRRRLVNDKTFKIALMTLAEVRELKKMVN--FFHIMNDCGCEYSLEMLNKVVKTL----C 154
+V ++ I++M + + N CE + + N V++ L C
Sbjct: 132 KDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNC 191
Query: 155 QRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDV 214
+ V A LS I P +G ++K C V ++ A + MT G P+ +
Sbjct: 192 HK---VAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVI 248
Query: 215 VDKMIETFFKINKDDEAMKVFQ-MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEE 273
+I + K N+ +EA+++ + M + + D T+ VI +CK +I++A M+
Sbjct: 249 YQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDA--ETFNDVILGLCKFDRINEAAKMVNR 306
Query: 274 MFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREA 333
M RG D++T ++ GL GR+ A + I KP +++ LI G + R +A
Sbjct: 307 MLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPTSVIFNTLIHGFVTHGRLDDA 366
Query: 334 TQVFREMIKR-GCEPTMHTYIMLLQGHLGKRG-------------RKGPDPLVNFDTIFV 379
V +M+ G P + TY L+ G+ K+G KG P V TI V
Sbjct: 367 KAVLSDMVTSYGIVPDVCTYNSLIYGYW-KKGLVGLALEVLRDMRNKGCKPNVYSYTILV 425
Query: 380 GGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE----EGVVMFEEVGKK 432
G K GK +A + + G++ +N + + E E V +F E+ +K
Sbjct: 426 DGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRK 482
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 111/238 (46%), Gaps = 3/238 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFF 131
N++ FN ++ K I E +EM R+ D TF + L EV E+K +
Sbjct: 452 NTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLL 511
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDV 190
M G + N ++ +R + EA+ L+ ++ + +EI Y LIKG C
Sbjct: 512 RDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRA 571
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G++ +A ++ M +G PS + +I + +EA++ FQ V R + T
Sbjct: 572 GEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVE-FQKEMVLRGSTPDIVT 630
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
+ +I+ +C+ G+I TM ++ GI D +T ++++ L G + +A +++E
Sbjct: 631 FNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDE 688
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 107/238 (44%), Gaps = 11/238 (4%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND----KTFKIALMTLAEVRELKKMVNFF 131
TFN ++ + + I L++M +V + T A + E++E +K+VN
Sbjct: 490 TFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEM 549
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDV 190
E + N ++K LC+ V +A+ L K L + + P+ I+ LI G C
Sbjct: 550 VFQGSLLDEITY---NSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRS 606
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G + EA + M G P I + +I + + ++ + +F+ ++ + + T
Sbjct: 607 GMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPP-DTVT 665
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL--REAYKVV 306
Y ++ W+CK G + A +L+E + G ++ T S ++ L+ + L R Y V
Sbjct: 666 YNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSLVPQETLDRRTFYNAV 723
>gi|449479180|ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 653
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 166/355 (46%), Gaps = 26/355 (7%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEV----RELKKMV 128
+++T+N M+ K+ + E ++M + N K KI MTL + R+ +
Sbjct: 254 DTVTYNIMIKGYCKAGKLQKAMEKFRDM---EMKNVKPDKITYMTLIQACYSERDFDTCL 310
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGY 187
+ + M + G E + V+ LC+++ +EA + +++ + N Y LI Y
Sbjct: 311 SLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSY 370
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
G + EA +++ M +EGFEP ++ K + D+ M++F R K + +
Sbjct: 371 SKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGV-AIN 429
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
Y +ID + K G+I A + EEM ++G D+ ++II L G++ +A +
Sbjct: 430 AMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFG 489
Query: 308 EIEKP--DISLYHG--LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG--HLG 361
+E+ D ++Y LI GL + + EA + + +MI +G PT+ ++ L G G
Sbjct: 490 RMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCG 549
Query: 362 KRGRK----------GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
K R G P F+ + + L KA + +A K + +++RG E+P
Sbjct: 550 KVARACKILDDLAPMGIIPETAFEDM-INTLCKAQRIKEACKLADGIVDRGREIP 603
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 96/457 (21%), Positives = 188/457 (41%), Gaps = 57/457 (12%)
Query: 2 PVDPGHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRP-VYLFF 60
P+DP V L + E L S L+ F + + L +P V + F
Sbjct: 77 PLDPSPWVAQILNLLDGSSNMEHNLDSFCRKFFVKLSPNFVTFVLQSVELREKPEVAVRF 136
Query: 61 QYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALM-TLA 119
+ Q + H +++++ S ++ E+ R L+ ++ +L+ +
Sbjct: 137 FFWAGKQKKYVHKIECHVSLIELLTFSADLVKIRLVFFELKDRGLLMTESAANSLIKSFG 196
Query: 120 EVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEI 178
+ +++++ + M + G + SL N +V L + A+ + + I P+ +
Sbjct: 197 NLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTV 256
Query: 179 AYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
Y +IKGYC G L +A + + M + +P +I+ + D + ++ M
Sbjct: 257 TYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEM 316
Query: 239 RVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEM------------------------ 274
+R ++ +Y +VI +CK+ K +AY + E M
Sbjct: 317 E-ERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGS 375
Query: 275 -------FKR----GIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISL----YHG 319
F+R G E D +T S ++ GL GRL + ++ + +++ Y
Sbjct: 376 MEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYAS 435
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR-------------K 366
LI GL + R +A +F EM ++GC + Y ++ L K G+ +
Sbjct: 436 LIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDA-LAKHGKIDQALALFGRMEEE 494
Query: 367 GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
G D V TI + GL K K+ +A K+ ++++++G+
Sbjct: 495 GCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGI 531
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 137/320 (42%), Gaps = 22/320 (6%)
Query: 113 IALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE- 171
I L+T + +L K+ F + D G + N ++K+ LV E ++ ++ E
Sbjct: 157 IELLTFSA--DLVKIRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKEN 214
Query: 172 WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEA 231
I P+ Y +L+ G + + A K++ +M P + MI+ + K K +A
Sbjct: 215 GIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKA 274
Query: 232 MKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
M+ F+ M +K + + TY +I ++ EM +RG+E + S +I
Sbjct: 275 MEKFRDMEMKNVKPDKI-TYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIG 333
Query: 292 GLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
GL + + EAY V E + + ++++Y LI + EA ++F M G EP
Sbjct: 334 GLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEP 393
Query: 348 TMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKY 394
TY +L+ G L K GR KG F + GL KAG+ DA
Sbjct: 394 DAVTYSVLVNG-LCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENL 452
Query: 395 VERVMNRGVEVPRFDYNKFL 414
E + +G + YN +
Sbjct: 453 FEEMSEKGCARDSYCYNAII 472
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 120/278 (43%), Gaps = 23/278 (8%)
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
E A LIK + ++G + E +W M + G +PS+ + ++ + A KVF
Sbjct: 184 TESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVF 243
Query: 236 QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
++M ++ TY I+I CK GK+ +A +M + ++ D +T ++I +
Sbjct: 244 EVMDGGKIVP-DTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYS 302
Query: 296 RGRLREAYKVVEEIEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
+ E+E+ + + Y +I GL + R+ EA VF M ++GC +
Sbjct: 303 ERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAI 362
Query: 352 YIMLLQGHLGKRG-------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERV 398
Y L+ + K G +G +P ++ V GL K+G+ D + +
Sbjct: 363 YTALIDSY-SKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFC 421
Query: 399 MNRGVEVPRFDYNKFLHYYSN----EEGVVMFEEVGKK 432
N+GV + Y + E+ +FEE+ +K
Sbjct: 422 RNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEK 459
>gi|294461967|gb|ADE76539.1| unknown [Picea sitchensis]
Length = 486
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 150/346 (43%), Gaps = 56/346 (16%)
Query: 67 QPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTL-AEVRELK 125
QP F H+ T++ ++ +G++R +Q+M + + ++ + EV
Sbjct: 126 QPGFKHSYSTYHTLICKLGRARQFKTMEGLIQQMRKDGCPYTPGLFVDIIEIYGEVGMPN 185
Query: 126 KMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLI 184
+ + FH M + G E + N ++ L + K + A L KL E+ I PN Y LI
Sbjct: 186 EAIKAFHQMLEFGYEPLAKHFNVLLIVLIEHKCLETALSLFKKLHEFGISPNTRTYNILI 245
Query: 185 KGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD 244
+ +C L A ++N M +G P ++
Sbjct: 246 RAHCHSDKLSHAYFLFNKMHKQGCIPDVE------------------------------- 274
Query: 245 DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK 304
TY I++ +C++ ++ A +L+EM +G D LT ++++ L + LREAY+
Sbjct: 275 -----TYSILMQGLCRKSQVKTALGVLDEMLNKGYVPDALTYNTLLNSLCRKMNLREAYR 329
Query: 305 VVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL 360
++ +++ PD+ Y+ +I G R RA +A Q+ R+M + GC P +Y L+ G L
Sbjct: 330 LLSKMKVMGCNPDVINYNTVITGFCREGRALDACQILRDMPENGCLPNALSYRTLVNG-L 388
Query: 361 GKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAK 393
G+ G P ++ + + GL GK +A +
Sbjct: 389 CNEGKFDEAKDFVEEMISNGFIPHISIYHLLITGLCNEGKVGEACE 434
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 104/251 (41%), Gaps = 33/251 (13%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
N +T+ I + +L F+ M+ GC +E + +++ LC++ V A ++
Sbjct: 237 NTRTYNILIRAHCHSDKLSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTALGVL 296
Query: 167 LK-LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI 225
+ L++ P+ + Y L+ C +L EA ++ + M G P + + +I F +
Sbjct: 297 DEMLNKGYVPDALTYNTLLNSLCRKMNLREAYRLLSKMKVMGCNPDVINYNTVITGFCRE 356
Query: 226 NKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
+ +A ++ + M LS YR +++ +C GK +A +EEM G
Sbjct: 357 GRALDACQILRDMPENGCLPNALS-YRTLVNGLCNEGKFDEAKDFVEEMISNGF------ 409
Query: 286 LSSIIYGLLARGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGC 345
P IS+YH LI GL + EA +V M K+
Sbjct: 410 -------------------------IPHISIYHLLITGLCNEGKVGEACEVLVMMTKQTL 444
Query: 346 EPTMHTYIMLL 356
P T+ +LL
Sbjct: 445 APHESTWSVLL 455
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 83/207 (40%), Gaps = 5/207 (2%)
Query: 56 VYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIA 114
Y F K Q C + T++ ++ + + + L EM + V D T+
Sbjct: 257 AYFLFNKMHK-QGCIP-DVETYSILMQGLCRKSQVKTALGVLDEMLNKGYVPDALTYNTL 314
Query: 115 LMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WI 173
L +L L++ M GC + N V+ C+ ++A ++ + E
Sbjct: 315 LNSLCRKMNLREAYRLLSKMKVMGCNPDVINYNTVITGFCREGRALDACQILRDMPENGC 374
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
PN ++Y L+ G C+ G EA M GF P I + +I K EA +
Sbjct: 375 LPNALSYRTLVNGLCNEGKFDEAKDFVEEMISNGFIPHISIYHLLITGLCNEGKVGEACE 434
Query: 234 VFQMMRVKRMDDLGLSTYRIVIDWMCK 260
V MM K+ ST+ +++ +C+
Sbjct: 435 VLVMM-TKQTLAPHESTWSVLLMRICE 460
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 84/204 (41%), Gaps = 22/204 (10%)
Query: 231 AMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTM---LEEMFKRGIEADNLTLS 287
AM++F++ + STY +I CK G+ Q TM +++M K G
Sbjct: 116 AMEIFEVASRQPGFKHSYSTYHTLI---CKLGRARQFKTMEGLIQQMRKDGCPYTPGLFV 172
Query: 288 SIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
II G EA K ++ +P ++ L+ L+ + A +F+++ +
Sbjct: 173 DIIEIYGEVGMPNEAIKAFHQMLEFGYEPLAKHFNVLLIVLIEHKCLETALSLFKKLHEF 232
Query: 344 GCEPTMHTYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDA 391
G P TY +L++ H K ++G P V +I + GL + + A
Sbjct: 233 GISPNTRTYNILIRAHCHSDKLSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTA 292
Query: 392 AKYVERVMNRGVEVPRFDYNKFLH 415
++ ++N+G YN L+
Sbjct: 293 LGVLDEMLNKGYVPDALTYNTLLN 316
>gi|297733848|emb|CBI15095.3| unnamed protein product [Vitis vinifera]
Length = 815
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 141/330 (42%), Gaps = 35/330 (10%)
Query: 49 FPLSWRP------VYLFFQYTQKA---------QPCFAHNSITFNRMVDIIGKSRNIDLF 93
+P+ W P + L + + KA P +AH S +F+ +DI G+ R+
Sbjct: 61 YPVEWTPNLVDRVLKLLWNHGPKALQFFKSLDYHPTYAHVSSSFDHAIDIAGRLRDYKTL 120
Query: 94 WETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKT 152
W + M RRL N KTF I + + + F M++ GC L N ++
Sbjct: 121 WTLVDRMRTRRLGPNPKTFAIITERYVSAGKPDRAIKIFFSMHEHGCVQDLNSFNTILDV 180
Query: 153 LCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSI 212
LC+ K V A + K+ +G+ G L EA + + M E +
Sbjct: 181 LCKSKRVEMADNKLFKV--------------FRGFFRAGQLKEAWEFFLQMKKRKCEIDV 226
Query: 213 DVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLE 272
++ F + +A +VF M + ++TY I +CK+ + A ++ E
Sbjct: 227 VTYTTVVHGFGVAGEVRKAQRVFNEM-IGEGVLPSVATYNAFIQVLCKKDNVENAISVFE 285
Query: 273 EMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLR 328
EM ++G ++ T + +I GL GR+ +A + + ++ +P++ +Y+ +I+
Sbjct: 286 EMLRKGYMPNSTTYNVVIRGLCHVGRMEKAMEFMARMKDDECEPNVQIYNVVIRYFCDAE 345
Query: 329 RAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+ VF +M C P + TY +L+
Sbjct: 346 EIEKGLNVFEKMGDADCLPNLDTYNILISA 375
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 111/265 (41%), Gaps = 41/265 (15%)
Query: 190 VGDLIEASKIWNL---MTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDD 245
G L + +W L M P+ + E + K D A+K+F M + D
Sbjct: 111 AGRLRDYKTLWTLVDRMRTRRLGPNPKTFAIITERYVSAGKPDRAIKIFFSMHEHGCVQD 170
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
L +++ ++D +CK ++ A L ++F+ G G+L+EA++
Sbjct: 171 L--NSFNTILDVLCKSKRVEMADNKLFKVFR---------------GFFRAGQLKEAWEF 213
Query: 306 VEEIEKP----DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG 361
+++K D+ Y ++ G R+A +VF EMI G P++ TY +Q
Sbjct: 214 FLQMKKRKCEIDVVTYTTVVHGFGVAGEVRKAQRVFNEMIGEGVLPSVATYNAFIQVLCK 273
Query: 362 KRG------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFD 409
K RKG P + + GL G+ A +++ R+ + E
Sbjct: 274 KDNVENAISVFEEMLRKGYMPNSTTYNVVIRGLCHVGRMEKAMEFMARMKDDECEPNVQI 333
Query: 410 YNKFLHYYSN----EEGVVMFEEVG 430
YN + Y+ + E+G+ +FE++G
Sbjct: 334 YNVVIRYFCDAEEIEKGLNVFEKMG 358
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 103/229 (44%), Gaps = 28/229 (12%)
Query: 76 TFNRMVDIIGKSRNIDLF--------------------WETLQEMGRRRL-VNDKTFKIA 114
+FN ++D++ KS+ +++ WE +M +R+ ++ T+
Sbjct: 173 SFNTILDVLCKSKRVEMADNKLFKVFRGFFRAGQLKEAWEFFLQMKKRKCEIDVVTYTTV 232
Query: 115 LMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWI 173
+ E++K F+ M G S+ N ++ LC++ V A + + L +
Sbjct: 233 VHGFGVAGEVRKAQRVFNEMIGEGVLPSVATYNAFIQVLCKKDNVENAISVFEEMLRKGY 292
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
PN Y +I+G C VG + +A + M D+ EP++ + + +I F + ++ +
Sbjct: 293 MPNSTTYNVVIRGLCHVGRMEKAMEFMARMKDDECEPNVQIYNVVIRYFCDAEEIEKGLN 352
Query: 234 VFQMMRVKRMDDL-GLSTYRIVIDWMCKRGK---ISQAYTMLEEMFKRG 278
VF+ M D L L TY I+I M R K + A +L EM +RG
Sbjct: 353 VFEKM--GDADCLPNLDTYNILISAMFVRKKSDYLLTAGKLLIEMVERG 399
>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
Length = 822
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 173/396 (43%), Gaps = 61/396 (15%)
Query: 60 FQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLA 119
F + K +H + + M+D++ S ID+ E +EM + V + F +
Sbjct: 163 FAWMSKMGVSISHYAAS--EMLDLLIDSDRIDVILENYEEMCKGLGVYEFVFN----SFL 216
Query: 120 EVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQ-RKLVVEAKYLILKLSEWIKPNEI 178
+ E++K +NF + + G + NK++K LC ++ V + + + + PN +
Sbjct: 217 KRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLV 276
Query: 179 AYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
+ LI YC L EA ++NLM ++G P + + +I F+ K +E +F M
Sbjct: 277 TFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMA 336
Query: 239 RVK-----------------RMDDLG-----------------LSTYRIVIDWMCKRGKI 264
+ R+ DLG + TY I+I+ +C+ G++
Sbjct: 337 LARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRV 396
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV----VEEIEKPDISLYHGL 320
+A + ++ K+G+E LT SS+I G LR+ + + + + PD+ + L
Sbjct: 397 LEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSML 456
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG-KRGRKG------------ 367
I GL R EA + F + +KRG + + L+ G KR R G
Sbjct: 457 INGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKV 516
Query: 368 -PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
PD +V + T+ V GL + G+ +A +++ +G
Sbjct: 517 IPD-VVTY-TVLVKGLAEQGRLDEALALFFQLLKKG 550
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 146/317 (46%), Gaps = 21/317 (6%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKT-FKIALMT 117
FF ++ P + N +TF+ ++++ K +D + M + +V D + I +
Sbjct: 262 FFDMMVRSGP--SPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILING 319
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPN 176
L +L++ + F + G + + + + ++ + + +A + + L E I PN
Sbjct: 320 LFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPN 379
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
+ Y LI G C G ++EA ++ + +G EPS+ +I+ F K + ++
Sbjct: 380 VVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYG 439
Query: 237 -MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
M+R + D+ + + ++I+ + ++G + +A + KRG+ +N +++I G
Sbjct: 440 IMLRKGHVPDVVVCS--MLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFR 497
Query: 296 RGRLREA---------YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
R R+ YKV+ PD+ Y L+KGL R EA +F +++K+G
Sbjct: 498 LKRTRDGLKMYILMGMYKVI-----PDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFS 552
Query: 347 PTMHTYIMLLQGHLGKR 363
P Y L+ G KR
Sbjct: 553 PDHIIYCTLIDGFCKKR 569
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 101/201 (50%), Gaps = 6/201 (2%)
Query: 164 YLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFF 223
Y+++ + + I P+ + Y L+KG + G L EA ++ + +GF P + +I+ F
Sbjct: 508 YILMGMYKVI-PDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFC 566
Query: 224 KINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADN 283
K +++F++M+ + + Y ++I+ + G + +L E+ K G+E D
Sbjct: 567 KKRDPATGLQIFKLMQSNGIFP-DICIYNVLINMFFREGCVENVLELLREIIKYGLEPDI 625
Query: 284 LTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFRE 339
+T +++I G + +A K+ E ++ +P+ + LI + R +A +F
Sbjct: 626 VTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSS 685
Query: 340 MIKRGCEPTMHTYIMLLQGHL 360
M++RG EP + TY L+ G+
Sbjct: 686 MLERGPEPNILTYSCLIDGYF 706
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 114/252 (45%), Gaps = 16/252 (6%)
Query: 58 LFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT 117
LFFQ +K F+ + I + ++D K R+ + + M + D L+
Sbjct: 542 LFFQLLKKG---FSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLIN 598
Query: 118 LAEVRE--LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIK- 174
+ RE ++ ++ + G E + N ++ C K+ +A +KL E +K
Sbjct: 599 MF-FREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKA----IKLFEVLKC 653
Query: 175 ----PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDE 230
PN I + LI YC G + +A I++ M + G EP+I +I+ +FK +
Sbjct: 654 GRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTES 713
Query: 231 AMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
A ++++ M R+ + +Y I+ID +CK+G + +A + R + D + +I
Sbjct: 714 AFELYEKMLGDRVSP-NIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILI 772
Query: 291 YGLLARGRLREA 302
G GRL EA
Sbjct: 773 RGYCKVGRLAEA 784
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 47/243 (19%), Positives = 93/243 (38%), Gaps = 33/243 (13%)
Query: 179 AYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
Y +L+ YC G + A + M+ G S +M++ ++ D ++ ++ M
Sbjct: 142 VYSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYEEM 201
Query: 239 RVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR 298
GL Y V + KRG++ + + +RG+ + + I+ GL +
Sbjct: 202 CK------GLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQ 255
Query: 299 LREAYK----VVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIM 354
+ A +V P++ + LI + R EA ++ MI++G P + Y
Sbjct: 256 IGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIY-- 313
Query: 355 LLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
+I + GL +AGK + + RGV++ ++ +
Sbjct: 314 ---------------------SILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIM 352
Query: 415 HYY 417
Y
Sbjct: 353 DAY 355
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 11/162 (6%)
Query: 65 KAQPCFAHNSITFNRMVDIIGKSRNID---LFWETLQEMGRRRLVNDKTFKIALMTLAEV 121
+ QP N+ITF ++D K +D L + ++ E G N T+ + +
Sbjct: 655 RTQP----NAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEP--NILTYSCLIDGYFKT 708
Query: 122 RELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAY 180
+ + M ++ + ++ LC++ L+ EA + + P+ IAY
Sbjct: 709 ENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAY 768
Query: 181 GWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETF 222
G LI+GYC VG L EA +++ M G P D++ K + +
Sbjct: 769 GILIRGYCKVGRLAEAMMLYDHMLVNGIMPD-DLLQKALAEY 809
>gi|255660854|gb|ACU25596.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 139/302 (46%), Gaps = 39/302 (12%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T + L L E R K + +F+ + +CG SL N +++ C+ + A+ + +
Sbjct: 103 TCRKVLEHLMEFRYFKLVWDFYKEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAI 162
Query: 170 SEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++W ++P+ +++ LI GY +GDL E ++ + M G +P + +I K K
Sbjct: 163 TKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKL 222
Query: 229 DEAMKVFQMMR------------------------------VKRMDDLGLS----TYRIV 254
DEA ++F M K+M GLS TY +
Sbjct: 223 DEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTL 282
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY----KVVEEIE 310
I +CK+G++ Q + +++EM G++ D ++ +++I G G L A K+++E
Sbjct: 283 IYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESI 342
Query: 311 KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDP 370
+ D Y LI L R RA +A ++ REM+ G +P TY M++ KR K
Sbjct: 343 RLDDVAYTALISCLCREGRAGDAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASK 402
Query: 371 LV 372
L+
Sbjct: 403 LL 404
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/315 (20%), Positives = 133/315 (42%), Gaps = 48/315 (15%)
Query: 141 YSLEMLNKVVKTLCQRKLVVEAKYLI------------LKLSEWI---KPNEIA----YG 181
++L ++ LC ++++EAK LI + E I K +I+ +
Sbjct: 11 HTLHSYCTMIHLLCTHQMLIEAKSLIQVVVSRKGKDSASDVFEAILETKGTQISDFYVFS 70
Query: 182 WLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIET-----FFKINKDDEAMKVFQ 236
L+ Y + G + +A + + L D K++E +FK+ D F
Sbjct: 71 GLMIAYLESGFVRDAVQCFRLTKQHKIRVPFDTCRKVLEHLMEFRYFKLVWD------FY 124
Query: 237 MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR 296
++ L + I++ CK G++ A ++ + + K G+ ++ +++I G +
Sbjct: 125 KEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKL 184
Query: 297 GRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
G L E +++ + +PD+ Y LI GL + + EA ++F EM+ G P T+
Sbjct: 185 GDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTF 244
Query: 353 IMLLQGHLGKRG------------RKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVM 399
L+ GH +G P L+ ++T+ + GL K G+ ++ ++
Sbjct: 245 TTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTL-IYGLCKKGELKQVHDLIDEMI 303
Query: 400 NRGVEVPRFDYNKFL 414
G++ + Y +
Sbjct: 304 MNGLKPDKISYTTLI 318
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 93/205 (45%), Gaps = 6/205 (2%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK- 168
T+ I + L + +L + F+ M D G + ++ C+ + V A + +
Sbjct: 208 TYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQM 267
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
LS+ + P+ I Y LI G C G+L + + + M G +P +I+ K
Sbjct: 268 LSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDL 327
Query: 229 DEAMKVFQMM--RVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTL 286
+ A+++ M R+DD+ Y +I +C+ G+ A ML EM G++ DN T
Sbjct: 328 EIALELRNKMIQESIRLDDVA---YTALISCLCREGRAGDAEKMLREMLSVGLKPDNGTY 384
Query: 287 SSIIYGLLARGRLREAYKVVEEIEK 311
+ II + + A K++ E+++
Sbjct: 385 TMIINEFCKKRDSKTASKLLREMQR 409
>gi|357444861|ref|XP_003592708.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355481756|gb|AES62959.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 1430
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 164/379 (43%), Gaps = 44/379 (11%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKI---ALMTLAEVRELKKMVN 129
N +F+ ++D K+ +DL +M RR V+ T I + +L + L+K
Sbjct: 425 NITSFSIVIDGFLKNDQLDLALSLFNDM--RRFVDKPTILIYNNLIDSLCKSNRLEKSYE 482
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-----WIKPNEIAYGWLI 184
M + G E + N + LC+RK V A ++ ++ WIK + L+
Sbjct: 483 LLREMKELGIEPTHFTYNSIYGCLCKRKDVSAACVMLKEMGSCGHGPWIKHTTL----LV 538
Query: 185 KGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ-MMRVKRM 243
K CD G +IEA + + MT +GF P I I I + D AMK+F+ +
Sbjct: 539 KELCDHGRVIEACEFLDNMTQQGFLPDIVSYSAAIGGLVNIQEVDHAMKIFKDLWSHGHC 598
Query: 244 DDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA- 302
D+ + ++I +CK + ++A + E+ KRG+ +T + I G + +A
Sbjct: 599 PDV--VCFNVLIRGLCKVNRFTEAEDLFHELVKRGLSPSVVTYNLFIDCWCKNGNVDKAM 656
Query: 303 ---YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
+++ +E + P + Y L+ G + R +A +F+EM K GC P T++ L
Sbjct: 657 AHLFRMTKEDKVPSVVTYTTLVDGFCKEERPDDAILLFKEMEKNGCPPNQITFMAL---- 712
Query: 360 LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN 419
+ GL K + +A Y+ + + ++ F Y L Y +
Sbjct: 713 -------------------IYGLCKCCRPTEALCYLREMQQKEMKPDSFIYVALLSAYLS 753
Query: 420 EEGVVMFEEVGKKLREVGL 438
+ + E+ +++ ++G
Sbjct: 754 DLNLTSAFEIFREMVDLGF 772
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 129/315 (40%), Gaps = 44/315 (13%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+ +N ++D + KS ++ +E L+EM + T+ L + +++
Sbjct: 462 LIYNNLIDSLCKSNRLEKSYELLREMKELGIEPTHFTYNSIYGCLCKRKDVSAACVMLKE 521
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE---------------------- 171
M CG ++ +VK LC V+EA + +++
Sbjct: 522 MGSCGHGPWIKHTTLLVKELCDHGRVIEACEFLDNMTQQGFLPDIVSYSAAIGGLVNIQE 581
Query: 172 -----------WIK---PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDK 217
W P+ + + LI+G C V EA +++ + G PS+ +
Sbjct: 582 VDHAMKIFKDLWSHGHCPDVVCFNVLIRGLCKVNRFTEAEDLFHELVKRGLSPSVVTYNL 641
Query: 218 MIETFFKINKDDEAMKVFQMMRVKRMDDL-GLSTYRIVIDWMCKRGKISQAYTMLEEMFK 276
I+ + K D+AM + R+ + D + + TY ++D CK + A + +EM K
Sbjct: 642 FIDCWCKNGNVDKAMA--HLFRMTKEDKVPSVVTYTTLVDGFCKEERPDDAILLFKEMEK 699
Query: 277 RGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRARE 332
G + +T ++IYGL R EA + E++ KPD +Y L+ L
Sbjct: 700 NGCPPNQITFMALIYGLCKCCRPTEALCYLREMQQKEMKPDSFIYVALLSAYLSDLNLTS 759
Query: 333 ATQVFREMIKRGCEP 347
A ++FREM+ G P
Sbjct: 760 AFEIFREMVDLGFFP 774
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 94/504 (18%), Positives = 184/504 (36%), Gaps = 127/504 (25%)
Query: 27 HSSLSSCNFNL-THEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIG 85
H SSC+F FFL+ N L + LF + ++K F + + N ++++I
Sbjct: 115 HLPNSSCSFTPGAFSFFLRCLGNLRLVHQANQLFDEMSRKG--LFVPDRYSHNTLLEVIS 172
Query: 86 KSRNIDLF-----------WE------------------------TLQEMGRRRLVNDKT 110
K +DL WE +EM + V+++
Sbjct: 173 KCGLVDLMEMRLNEMKGFGWEFDKYTLTPVIVTYCNAQRFDQALSVYKEMEEKGWVDERV 232
Query: 111 FKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL- 169
+ + +++ E+ K M +CG S + ++ + V +A L K+
Sbjct: 233 CSMMALCFSKLGEVDKAFELVERMGECGMRLSEKTFCVLIHGFVKESRVDKALQLFDKMR 292
Query: 170 -SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFK---- 224
+ P+ Y LI G C D A +++ M + G P I ++ K+I F
Sbjct: 293 REDSFTPDVSLYDVLIGGLCKNKDTDRAISLFSEMKEFGVRPDIGILTKLISCFSDSKSM 352
Query: 225 -----------------------------INKD--DEAMKVFQMM--------------- 238
+N DEA ++ +MM
Sbjct: 353 VSRLLEEIPEGEEDEQTLVLIYNALLTCYVNDGLMDEAYRLIRMMIQSKSSTDSDENRMD 412
Query: 239 ----RVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
VKRM ++++ IVID K ++ A ++ +M + + L +++I L
Sbjct: 413 VFFKTVKRMVFPNITSFSIVIDGFLKNDQLDLALSLFNDMRRFVDKPTILIYNNLIDSLC 472
Query: 295 ARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
RL ++Y+++ E++ +P Y+ + L + + A + +EM
Sbjct: 473 KSNRLEKSYELLREMKELGIEPTHFTYNSIYGCLCKRKDVSAACVMLKEM---------- 522
Query: 351 TYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY 410
G G P + T+ V L G+ ++A ++++ + +G +P
Sbjct: 523 -------------GSCGHGPWIKHTTLLVKELCDHGRVIEACEFLDNMTQQGF-LP---- 564
Query: 411 NKFLHYYSNEEGVVMFEEVGKKLR 434
+ Y + G+V +EV ++
Sbjct: 565 -DIVSYSAAIGGLVNIQEVDHAMK 587
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 111/278 (39%), Gaps = 42/278 (15%)
Query: 52 SWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNID-------------------L 92
SWR FF + Q + H S TFN + I +S
Sbjct: 69 SWRVAQTFFHWASN-QRHYHHTSFTFNAIASIFSRSHQTQPLIHLAKHLPNSSCSFTPGA 127
Query: 93 FWETLQEMGRRRLVN------DKTFKIALM--------TLAEVRELKKMVNFFHI----M 134
F L+ +G RLV+ D+ + L TL EV +V+ + M
Sbjct: 128 FSFFLRCLGNLRLVHQANQLFDEMSRKGLFVPDRYSHNTLLEVISKCGLVDLMEMRLNEM 187
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE--WIKPNEIAYGWLIKGYCDVGD 192
G E+ L V+ T C + +A + ++ E W+ +E + + +G+
Sbjct: 188 KGFGWEFDKYTLTPVIVTYCNAQRFDQALSVYKEMEEKGWV--DERVCSMMALCFSKLGE 245
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ +A ++ M + G S +I F K ++ D+A+++F MR + +S Y
Sbjct: 246 VDKAFELVERMGECGMRLSEKTFCVLIHGFVKESRVDKALQLFDKMRREDSFTPDVSLYD 305
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
++I +CK +A ++ EM + G+ D L+ +I
Sbjct: 306 VLIGGLCKNKDTDRAISLFSEMKEFGVRPDIGILTKLI 343
>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
Length = 951
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/412 (22%), Positives = 175/412 (42%), Gaps = 29/412 (7%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND----KTFKIALMTLAEVRELKKMV 128
+ + + ++D + K+ N+ ++ QE+ + L D F L TL + E K
Sbjct: 536 DHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAK--- 592
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGY 187
+F M + G E N ++ C+ +A L+ ++ IKPN I Y L+ G
Sbjct: 593 SFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGL 652
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
+ G + +A + N M GF P+ ++++ + D +++ ++M +
Sbjct: 653 LEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLH-AD 711
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
++ Y ++ +C G A +L+EM RGI D +T +++I G L A+ +
Sbjct: 712 ITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYA 771
Query: 308 EIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
++ P+I+ ++ L+ GL R EA V +M K G EP TY +L+ G+ K
Sbjct: 772 QMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKS 831
Query: 364 GR------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
+ KG P + + KAG A + + RGV Y+
Sbjct: 832 NKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYD 891
Query: 412 KFLHYYSNEEGVVMFEEVGKKLREVGL----ADLADIFQRYGKKMATRERRR 459
L+ +S + + K ++E+G ++ + + + + T E RR
Sbjct: 892 ILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTISSMSRAFSRPGMTGEARR 943
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 113/223 (50%), Gaps = 15/223 (6%)
Query: 153 LCQRKLVVEAKYL--ILKLSEWIKPNEIAYGW--LIKGYCDVGDLIEASKIWNLMTDEGF 208
LC+ LV EA L +L I ++ GW LI GYC V D+ A + MT +G
Sbjct: 160 LCRTGLVGEAAALAEMLVRGRGIDGLDVV-GWNALIDGYCKVQDMAAALAVVERMTTQGV 218
Query: 209 EPSIDVV--DKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQ 266
++DVV + ++ FF D A++V + M+ ++ + TY +I CK + +
Sbjct: 219 --ALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVEP-NVVTYTALIGEYCKGKGMDE 275
Query: 267 AYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIK 322
A+++ E M + G+ D +TLS+++ GL G+ EAY + E++K P+ Y LI
Sbjct: 276 AFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLID 335
Query: 323 GLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
L + RR E+ + EM+ RG + Y L+ LGK G+
Sbjct: 336 SLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMD-RLGKEGK 377
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 135/295 (45%), Gaps = 21/295 (7%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTL----AEVRELKK 126
A N +T+ ++D + K+R L EM R +V D ALM ++ E K
Sbjct: 324 APNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKD 383
Query: 127 MVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIK 185
++ H +D + +V C+ + A+ ++L++ E + PN + + +I
Sbjct: 384 VLR--HAQSD-NITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIIN 440
Query: 186 GYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD 245
G G L +A+ M D G P++ +I+ FFK + A+ V++ M +
Sbjct: 441 GLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHE---- 496
Query: 246 LGLSTYRIVIDWMC----KRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
G+ V+D + K G I A + ++M +RG+ D++ ++++ GL G +
Sbjct: 497 -GVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPA 555
Query: 302 AYKVVEEI-EK---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
A+KV +E+ EK PD +Y+ I L L + EA +EM G EP TY
Sbjct: 556 AFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATY 610
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 161/366 (43%), Gaps = 31/366 (8%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
N +T+ +VD ++ NID + L +M + ++ N TF + L + L K ++
Sbjct: 396 NFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYM 455
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK--LSEWIKPNEIAYGWLIKGYCD 189
M D G ++ ++ + + EA + + L E ++ N L+ G
Sbjct: 456 RKMKDSGIAPNVVTYGTLIDGFFKFQ-GQEAALDVYRDMLHEGVEANNFVVDSLVNGLRK 514
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVD--KMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
G++ A ++ M + G +D V+ +++ FK A KV Q + K +
Sbjct: 515 NGNIEGAEALFKDMDERGLL--LDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDA 572
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
+ Y + I+ +C GK S+A + L+EM G+E D T +++I G+ +A K+++
Sbjct: 573 V-VYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLK 631
Query: 308 EIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
E++ KP++ Y L+ GLL ++A + EM G PT T+ +LQ G R
Sbjct: 632 EMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSR 691
Query: 364 GRKGPDPLVNFDTIFVGGLVKA---------------GKSLDAAKYVERVMNRGVEVPRF 408
PD ++ + +G + A G + +A ++ ++ RG+
Sbjct: 692 ---RPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTI 748
Query: 409 DYNKFL 414
+N +
Sbjct: 749 TFNALI 754
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 128/290 (44%), Gaps = 27/290 (9%)
Query: 170 SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD 229
++ ++PN + Y LI YC + EA ++ M G P + + +++ + +
Sbjct: 250 ADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFS 309
Query: 230 EAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
EA +F + MD +G++ TY +ID + K + S++ +L EM RG+ D +
Sbjct: 310 EAYALF-----REMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVM 364
Query: 286 LSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMI 341
++++ L G++ EA V+ + P+ Y L+ R A QV +M
Sbjct: 365 YTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQME 424
Query: 342 KRGCEPTMHTYIMLLQGHLGKRG---------RKGPDPLVNFDTIFVGGLVKA---GKSL 389
++ P + T+ ++ G L KRG RK D + + + G L+ +
Sbjct: 425 EKSVIPNVVTFSSIING-LVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQ 483
Query: 390 DAAKYVER-VMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
+AA V R +++ GVE F + ++ + E + K + E GL
Sbjct: 484 EAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGL 533
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 131/295 (44%), Gaps = 17/295 (5%)
Query: 26 LHSSLSSCNF---NLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSIT-FNRMV 81
L + ++S F +LTH+ LQ C+ S RP + + + H IT +N +V
Sbjct: 664 LLNEMASAGFAPTSLTHQRVLQACSG---SRRP-DVILEIHELMMGAGLHADITVYNTLV 719
Query: 82 DII---GKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIMNDC 137
++ G +RN + L EM R + D TF ++ + L + M
Sbjct: 720 HVLCCHGMARNATV---VLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQ 776
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEA 196
G ++ N ++ L + EA ++ + + ++PN + Y L+ GY + +EA
Sbjct: 777 GLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEA 836
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVID 256
+++ M +GF P + ++ F K ++A ++F M+ + + STY I+++
Sbjct: 837 LRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTS-STYDILLN 895
Query: 257 WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK 311
K + +L++M + G + T+SS+ G EA ++++ + K
Sbjct: 896 GWSKLRNGIEVRILLKDMKELGFKPSKGTISSMSRAFSRPGMTGEARRLLKTLFK 950
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 72/180 (40%), Gaps = 29/180 (16%)
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE-- 307
+Y I + + ++G A +L EM KRG+ D +T+S+ + GL G + EA + E
Sbjct: 117 SYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEML 176
Query: 308 ----EIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
I+ D+ ++ LI G +++ A V M +G + Y L
Sbjct: 177 VRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSL-------- 228
Query: 364 GRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGV 423
V G +G + A + VER+ GVE Y + Y +G+
Sbjct: 229 ---------------VAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGM 273
>gi|449438480|ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 166/355 (46%), Gaps = 26/355 (7%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEV----RELKKMV 128
+++T+N M+ K+ + E ++M + N K KI MTL + R+ +
Sbjct: 252 DTVTYNIMIKGYCKAGKLQKAMEKFRDM---EMKNVKPDKITYMTLIQACYSERDFDTCL 308
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGY 187
+ + M + G E + V+ LC+++ +EA + +++ + N Y LI Y
Sbjct: 309 SLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSY 368
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
G + EA +++ M +EGFEP ++ K + D+ M++F R K + +
Sbjct: 369 SKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGV-AIN 427
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
Y +ID + K G+I A + EEM ++G D+ ++II L G++ +A +
Sbjct: 428 AMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFG 487
Query: 308 EIEKP--DISLYHG--LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG--HLG 361
+E+ D ++Y LI GL + + EA + + +MI +G PT+ ++ L G G
Sbjct: 488 RMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCG 547
Query: 362 KRGRK----------GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
K R G P F+ + + L KA + +A K + +++RG E+P
Sbjct: 548 KVARACKILDDLAPMGIIPETAFEDM-INTLCKAQRIKEACKLADGIVDRGREIP 601
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 96/457 (21%), Positives = 188/457 (41%), Gaps = 57/457 (12%)
Query: 2 PVDPGHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRP-VYLFF 60
P+DP V L + E L S L+ F + + L +P V + F
Sbjct: 75 PLDPSPWVAQILNLLDGSSNMEHNLDSFCRKFFVKLSPNFVTFVLQSVELREKPEVAVRF 134
Query: 61 QYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALM-TLA 119
+ Q + H +++++ S ++ E+ R L+ ++ +L+ +
Sbjct: 135 FFWAGKQKKYVHKIECHVSLIELLTFSADLVKIRLVFFELKDRGLLMTESAANSLIKSFG 194
Query: 120 EVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEI 178
+ +++++ + M + G + SL N +V L + A+ + + I P+ +
Sbjct: 195 NLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTV 254
Query: 179 AYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
Y +IKGYC G L +A + + M + +P +I+ + D + ++ M
Sbjct: 255 TYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEM 314
Query: 239 RVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEM------------------------ 274
+R ++ +Y +VI +CK+ K +AY + E M
Sbjct: 315 E-ERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGS 373
Query: 275 -------FKR----GIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISL----YHG 319
F+R G E D +T S ++ GL GRL + ++ + +++ Y
Sbjct: 374 MEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYAS 433
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR-------------K 366
LI GL + R +A +F EM ++GC + Y ++ L K G+ +
Sbjct: 434 LIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDA-LAKHGKIDQALALFGRMEEE 492
Query: 367 GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
G D V TI + GL K K+ +A K+ ++++++G+
Sbjct: 493 GCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGI 529
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 137/320 (42%), Gaps = 22/320 (6%)
Query: 113 IALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE- 171
I L+T + +L K+ F + D G + N ++K+ LV E ++ ++ E
Sbjct: 155 IELLTFSA--DLVKIRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKEN 212
Query: 172 WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEA 231
I P+ Y +L+ G + + A K++ +M P + MI+ + K K +A
Sbjct: 213 GIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKA 272
Query: 232 MKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
M+ F+ M +K + + TY +I ++ EM +RG+E + S +I
Sbjct: 273 MEKFRDMEMKNVKPDKI-TYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIG 331
Query: 292 GLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
GL + + EAY V E + + ++++Y LI + EA ++F M G EP
Sbjct: 332 GLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEP 391
Query: 348 TMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKY 394
TY +L+ G L K GR KG F + GL KAG+ DA
Sbjct: 392 DAVTYSVLVNG-LCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENL 450
Query: 395 VERVMNRGVEVPRFDYNKFL 414
E + +G + YN +
Sbjct: 451 FEEMSEKGCARDSYCYNAII 470
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 120/278 (43%), Gaps = 23/278 (8%)
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
E A LIK + ++G + E +W M + G +PS+ + ++ + A KVF
Sbjct: 182 TESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVF 241
Query: 236 QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
++M ++ TY I+I CK GK+ +A +M + ++ D +T ++I +
Sbjct: 242 EVMDGGKIVP-DTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYS 300
Query: 296 RGRLREAYKVVEEIEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
+ E+E+ + + Y +I GL + R+ EA VF M ++GC +
Sbjct: 301 ERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAI 360
Query: 352 YIMLLQGHLGKRG-------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERV 398
Y L+ + K G +G +P ++ V GL K+G+ D + +
Sbjct: 361 YTALIDSY-SKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFC 419
Query: 399 MNRGVEVPRFDYNKFLHYYSN----EEGVVMFEEVGKK 432
N+GV + Y + E+ +FEE+ +K
Sbjct: 420 RNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEK 457
>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Glycine max]
Length = 1078
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 148/308 (48%), Gaps = 16/308 (5%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHI 133
+TF+ +++ + I+ E + +M + LV N + + ++ LK+ +N + +
Sbjct: 421 VTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAV 480
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGD 192
MN G N +V T C+ + EA+Y + +S + PN + + +I GY + GD
Sbjct: 481 MNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGD 540
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV--KRMDDLGLST 250
++A +++ M G PS+ +++ +EA+K F +R +D++ +T
Sbjct: 541 ALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNT 600
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY----KVV 306
+ C+ G +S A ++ EM DN T +++I GL +G++ A K +
Sbjct: 601 K---LTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAI 657
Query: 307 EE-IEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
E+ + P+ ++Y L+ GLL+ AR A +F EM+ + EP + +++ + R
Sbjct: 658 EKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIID----QYSR 713
Query: 366 KGPDPLVN 373
KG VN
Sbjct: 714 KGKTSKVN 721
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 115/259 (44%), Gaps = 23/259 (8%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
PN I Y LI G+C G++ EA ++ ++M G P+ ++ +K + E V
Sbjct: 313 PNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGLYK---NAEFGMV 369
Query: 235 FQMMRVKRMDDLGLS--TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
++ RM + +S +Y +ID +CK G + +A +L++M K + D +T S +I G
Sbjct: 370 SSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLING 429
Query: 293 LLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG---- 344
G++ A +++ ++ K P+ LY LI ++ +EA + M G
Sbjct: 430 FFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVAD 489
Query: 345 ---CEPTMHTYIML-----LQGHLGKRGRKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYV 395
C + T+ + + R G DP V FD I + G +G +L A
Sbjct: 490 HFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCI-INGYGNSGDALKAFSVF 548
Query: 396 ERVMNRGVEVPRFDYNKFL 414
+++ + G F Y L
Sbjct: 549 DKMNSFGHFPSLFTYGGLL 567
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 125/305 (40%), Gaps = 42/305 (13%)
Query: 60 FQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTL 118
F + P N F+ ++ + ++R + +T MG R L + T + L +L
Sbjct: 91 FGALMETYPICNSNPAVFDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSL 150
Query: 119 AEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNE 177
+ +++ +FF M G + N ++ LC+R A +L+ K+ E + P
Sbjct: 151 VKEQKVDMFWSFFKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTA 210
Query: 178 IAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQM 237
+ Y L+ YC G AS++ + M +G +DV
Sbjct: 211 VTYNTLLNWYCKKGRYKAASQLIDCMASKGI--GVDV----------------------- 245
Query: 238 MRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
TY + ID +C+ + ++ Y +L+ M + + + +T +++I G + G
Sbjct: 246 -----------CTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREG 294
Query: 298 RLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYI 353
++ A KV +E+ P+ Y+ LI G EA ++ M+ G P TY
Sbjct: 295 KIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYG 354
Query: 354 MLLQG 358
LL G
Sbjct: 355 ALLNG 359
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 141/328 (42%), Gaps = 48/328 (14%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRE-------LKKM 127
T N ++ + K + +D+FW + M + + D TF I L L E + L+KM
Sbjct: 142 TCNMVLGSLVKEQKVDMFWSFFKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKM 201
Query: 128 ---------VNFFHIMN---------------DC----GCEYSLEMLNKVVKTLCQRKLV 159
V + ++N DC G + N + LC+
Sbjct: 202 EESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRS 261
Query: 160 VEAKYLILK--LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDK 217
+ YL+LK + PNEI Y LI G+ G + A+K+++ M+ P+ +
Sbjct: 262 AKG-YLLLKRMRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNT 320
Query: 218 MIETFFKINKDDEAMKVFQMMRVK--RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMF 275
+I EA+++ +M R +++ TY +++ + K + ++LE M
Sbjct: 321 LIAGHCTTGNIGEALRLMDVMVSHGLRPNEV---TYGALLNGLYKNAEFGMVSSILERMR 377
Query: 276 KRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAR 331
G+ +++ +++I GL G L EA ++++++ K PD+ + LI G R+ +
Sbjct: 378 MGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKIN 437
Query: 332 EATQVFREMIKRGCEPTMHTYIMLLQGH 359
A ++ +M K G P Y L+ +
Sbjct: 438 NAKEIMCKMYKTGLVPNGILYSTLIYNY 465
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 105/252 (41%), Gaps = 42/252 (16%)
Query: 148 KVVKTLCQRKLVVEAKYLILKLSE--WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
++ LC++ +V A L K E + PN Y L+ G G A I+ M +
Sbjct: 635 NLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLN 694
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKIS 265
+ EP + +I+ + + K + + M+ K + L+TY I++ KR ++
Sbjct: 695 KDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLC-FNLATYNILLHGYAKRHAMA 753
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYG--------------------------------- 292
+ + + ++M + G D + S+I G
Sbjct: 754 RCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLI 813
Query: 293 --LLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
R +++A+++V+++ + P++ Y+ L GL+R +A +V + +++ G
Sbjct: 814 TKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSV 873
Query: 347 PTMHTYIMLLQG 358
PT YI L+ G
Sbjct: 874 PTNKQYITLING 885
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 125/291 (42%), Gaps = 7/291 (2%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMT 117
F Y + F + +++ ++ +S++ D+ + L+ + V D+ TF + +
Sbjct: 756 FMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITK 815
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPN 176
E E+KK MN +++ N + L + +A + L + L P
Sbjct: 816 FCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPT 875
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
Y LI G C VG++ A K+ + M G + ++ K + A+ V
Sbjct: 876 NKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLD 935
Query: 237 MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR 296
+M ++ ++T+ ++ CK +++A + M ++ D + + +I GL A
Sbjct: 936 LMLEMQIIPT-VATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVLISGLCAN 994
Query: 297 GRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
G + A+K+ EE+++ P+ S+Y LI E+ ++ R++ R
Sbjct: 995 GDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSFCAGNYQIESEKLLRDIQDR 1045
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 89/193 (46%), Gaps = 17/193 (8%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFF--KINKDDEAM 232
P++ ++ LI GYC A KI +T EG V+D+ K + +E
Sbjct: 769 PDKFSWHSLILGYCQSKSFDVAIKILRWITLEG-----HVIDRFTFNMLITKFCERNEMK 823
Query: 233 KVFQMMRVKRMDDL----GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
K F++ VK+M+ + TY + + + + +A+ +L+ + + G N +
Sbjct: 824 KAFEL--VKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYIT 881
Query: 289 IIYGLLARGRLREAYKVVEEIEKPDISLYH----GLIKGLLRLRRAREATQVFREMIKRG 344
+I G+ G ++ A K+ +E++ IS ++ +++GL ++ A V M++
Sbjct: 882 LINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQ 941
Query: 345 CEPTMHTYIMLLQ 357
PT+ T+ L+
Sbjct: 942 IIPTVATFTTLMH 954
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 108/282 (38%), Gaps = 11/282 (3%)
Query: 85 GKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLE 144
GK + F + MG N TF + + K + F MN G SL
Sbjct: 504 GKLEEAEYFMNHMSRMGLDP--NSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLF 561
Query: 145 MLNKVVKTLCQRKLVVEAKYLILKLSEWIKPN---EIAYGWLIKGYCDVGDLIEASKIWN 201
++K LC + EA +L PN + + + C G+L +A + N
Sbjct: 562 TYGGLLKGLCIGGHINEALKFFHRLR--CIPNAVDNVIFNTKLTSTCRSGNLSDAIALIN 619
Query: 202 LMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKR 261
M F P +I K K A+ + K + + Y ++D + K
Sbjct: 620 EMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKH 679
Query: 262 GKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP----DISLY 317
G A + EEM + +E D + + II +G+ + ++ ++ +++ Y
Sbjct: 680 GHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATY 739
Query: 318 HGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
+ L+ G + ++++MI+ G P ++ L+ G+
Sbjct: 740 NILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGY 781
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 65/332 (19%), Positives = 129/332 (38%), Gaps = 56/332 (16%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
+++ FN ++D + + L M + L N T+ I L A+ + + +
Sbjct: 700 DTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLY 759
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIK-----PNEIAYGWLIKG 186
M G + ++ CQ K A +K+ WI + + LI
Sbjct: 760 KDMIRHGFLPDKFSWHSLILGYCQSKSFDVA----IKILRWITLEGHVIDRFTFNMLITK 815
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
+C+ ++ +A ++ M P++D + + + + +A +V Q++ ++
Sbjct: 816 FCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVL----LESG 871
Query: 247 GLST---YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
+ T Y +I+ MC+ G I A + +EM GI + N+ +S+I+ GL ++ A
Sbjct: 872 SVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAI 931
Query: 304 KVVE---EIE------------------------------------KPDISLYHGLIKGL 324
V++ E++ K D+ Y+ LI GL
Sbjct: 932 WVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVLISGL 991
Query: 325 LRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
A +++ EM +R P YI+L+
Sbjct: 992 CANGDIEAAFKLYEEMKQRDLWPNTSIYIVLI 1023
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 157/334 (47%), Gaps = 50/334 (14%)
Query: 75 ITFNRMVDIIGKSRNID---LFWETLQEMGRRRLVNDKT-FKIALMTLAEVRELKKMVNF 130
+ F+ M+ + +S N+D +++ +++E G L+ D + I + + +N
Sbjct: 376 VCFSSMMSLFTRSGNLDKALMYFNSVKEAG---LIPDNVIYTILIQGYCRKGMISVAMNL 432
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCD 189
+ M GC + N ++ LC+RK++ EA L +++E + P+ LI G+C
Sbjct: 433 RNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCK 492
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
+G+L A +++ M ++ + + +++ F K+ D A +++ M K + +S
Sbjct: 493 LGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPIS 552
Query: 250 TYRIVIDWMCKRGKISQAY-----------------------------------TMLEEM 274
Y I+++ +C +G +++A+ + LE+M
Sbjct: 553 -YSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKM 611
Query: 275 FKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK------PDISLYHGLIKGLLRLR 328
G D ++ +++IYG + + +A+ +V+++E+ PD+ Y+ ++ G R
Sbjct: 612 ISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQN 671
Query: 329 RAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
+ +EA V R+MI+RG P TY ++ G + +
Sbjct: 672 QMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQ 705
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 95/442 (21%), Positives = 179/442 (40%), Gaps = 64/442 (14%)
Query: 62 YTQKAQPCFAHNSITFNRMVDII---GKSRNIDLFWETLQEMG-RRRLVNDKTFKIALMT 117
Y + ++ N T N MV+ + GK + F +QE G +V T A +
Sbjct: 223 YQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSS 282
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPN 176
+ E +++N M G + N V+ LC+ AK + + L + P+
Sbjct: 283 KGLMEEAFELMN---AMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD 339
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
Y L+ C GD++E K+++ M P + M+ F + D+A+ F
Sbjct: 340 STTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFN 399
Query: 237 MMRVKRM--DDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
++ + D++ Y I+I C++G IS A + EM ++G D +T ++I++GL
Sbjct: 400 SVKEAGLIPDNV---IYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLC 456
Query: 295 ARGRLREAYKVVEEIE---------------------------------------KPDIS 315
R L EA K+ E+ + D+
Sbjct: 457 KRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVV 516
Query: 316 LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL-----QGHLGKRGR----- 365
Y+ L+ G ++ A +++ +M+ + PT +Y +L+ +GHL + R
Sbjct: 517 TYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEM 576
Query: 366 --KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGV 423
K P V + G ++G + D ++E++++ G YN ++ + EE +
Sbjct: 577 ISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENM 636
Query: 424 VMFEEVGKKLREVGLADLADIF 445
+ KK+ E + D+F
Sbjct: 637 SKAFGLVKKMEEEQGGLVPDVF 658
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 155/351 (44%), Gaps = 30/351 (8%)
Query: 95 ETLQEMGRRRLVNDKTFKIALMTL-AEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTL 153
+ +M R +V D ++M+L L K + +F+ + + G + +++
Sbjct: 361 KVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGY 420
Query: 154 CQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSI 212
C++ ++ A L + L + + + Y ++ G C L EA K++N MT+ P
Sbjct: 421 CRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDS 480
Query: 213 DVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLE 272
+ +I+ K+ AM++FQ M+ KR+ L + TY ++D K G I A +
Sbjct: 481 YTLTILIDGHCKLGNLQNAMELFQKMKEKRIR-LDVVTYNTLLDGFGKVGDIDTAKEIWA 539
Query: 273 EMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLR 328
+M + I ++ S ++ L ++G L EA++V +E+ KP + + + +IKG R
Sbjct: 540 DMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSG 599
Query: 329 RAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKS 388
A + +MI G P +Y L+ G + + N F GLVK +
Sbjct: 600 NASDGESFLEKMISEGFVPDCISYNTLIYGFVREE---------NMSKAF--GLVKKMEE 648
Query: 389 LDAAKYVERVMNRGVEVPR-FDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
+G VP F YN LH + + + E V +K+ E G+
Sbjct: 649 -----------EQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGV 688
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 145/350 (41%), Gaps = 31/350 (8%)
Query: 68 PCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV------------------NDK 109
P F H S++ + M+ I+ +S + L M RR V ND
Sbjct: 107 PNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDS 166
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
F + + T + R+L++ F ++ G S++ N ++ +L + V A + ++
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226
Query: 170 S-EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
S + N ++ C G + + + + ++G P I + +I +
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLM 286
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
+EA ++ M K G+ TY VI+ +CK GK +A + EM + G+ D+ T S
Sbjct: 287 EEAFELMNAMPGKGFSP-GVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 345
Query: 289 IIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
++ +G + E KV ++ PD+ + ++ R +A F + + G
Sbjct: 346 LLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405
Query: 345 CEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKY 394
P Y +L+QG+ RKG +++ +++ G ++D Y
Sbjct: 406 LIPDNVIYTILIQGYC----RKG---MISVAMNLRNEMLQQGCAMDVVTY 448
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 120/264 (45%), Gaps = 24/264 (9%)
Query: 58 LFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALM 116
LF + T++A +S T ++D K N+ E Q+M +R+ D T+ L
Sbjct: 467 LFNEMTERA---LFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLD 523
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEML------NKVVKTLCQRKLVVEA-KYLILKL 169
+V ++ + M S E+L + +V LC + + EA + +
Sbjct: 524 GFGKVGDIDTAKEIWADM------VSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMI 577
Query: 170 SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD 229
S+ IKP + +IKGYC G+ + M EGF P + +I F + ++
Sbjct: 578 SKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVR---EE 634
Query: 230 EAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
K F +++ + GL TY ++ C++ ++ +A +L +M +RG+ D T
Sbjct: 635 NMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRST 694
Query: 286 LSSIIYGLLARGRLREAYKVVEEI 309
+ +I G +++ L EA+++ +E+
Sbjct: 695 YTCMINGFVSQDNLTEAFRIHDEM 718
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 101/213 (47%), Gaps = 5/213 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+T+N ++D GK +ID E +M + ++ ++ I + L L + +
Sbjct: 516 VTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDE 575
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGD 192
M + ++ + N ++K C+ + + + K+ SE P+ I+Y LI G+ +
Sbjct: 576 MISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREEN 635
Query: 193 LIEASKIWNLMTDE--GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
+ +A + M +E G P + + ++ F + N+ EA V + M ++R + ST
Sbjct: 636 MSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKM-IERGVNPDRST 694
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADN 283
Y +I+ + +++A+ + +EM +RG D+
Sbjct: 695 YTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 130/288 (45%), Gaps = 54/288 (18%)
Query: 171 EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMI----------- 219
E PNE YG LI G C G L +A ++ + M D G P + V + +I
Sbjct: 24 ERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGD 83
Query: 220 ------------------------ETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVI 255
+ K + +EA ++F+ M + TY VI
Sbjct: 84 ALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVI 143
Query: 256 DWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK---- 311
+ +CK GK+ +A +L+ M + G + +T S ++ GL GR + + +++E+ +
Sbjct: 144 NGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQ 203
Query: 312 PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG------- 364
PD+ +Y+ L+ GL + RR EA ++ + MI+ GC PT+ TY L++ +
Sbjct: 204 PDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRL 263
Query: 365 ------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
R P ++N++T+ + GL + + LD A+ + + M VP
Sbjct: 264 IQVMSERGCPPDVINYNTV-IAGLCRDAR-LDDAQALLKQMVAARCVP 309
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 151/338 (44%), Gaps = 50/338 (14%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEM--GRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
ITFN +VD + KS ++ ++ + M + L N T+ + L + +L + +
Sbjct: 101 ITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLD 160
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVG 191
+MN+ GC ++ + +V+ LC+ + L+ +++ +P+ I Y L+ G C
Sbjct: 161 LMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSR 220
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTY 251
L EA ++ LM G P++ + ++E F + + D A ++ Q+M +R + Y
Sbjct: 221 RLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMS-ERGCPPDVINY 279
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL------ARGRLREAYKV 305
VI +C+ ++ A +L++M D +T S+II GL A +L A ++
Sbjct: 280 NTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEI 339
Query: 306 VEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMI-------------------- 341
+E +++ P+ Y +I+GL R R++++A + R MI
Sbjct: 340 LEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCK 399
Query: 342 ---------------KRGCEPTMHTYIMLLQGHLGKRG 364
+R C+P Y L+ G L K G
Sbjct: 400 SHDLDAAYKIFGMMSERECKPNPVAYAALIDG-LSKGG 436
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 131/293 (44%), Gaps = 8/293 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALM-TLAEVRELKKMVNFF 131
N T+ ++ + K+ +D +E L EM R + ++ L + + +F
Sbjct: 29 NEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYF 88
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI--LKLSEWIKPNEIAYGWLIKGYCD 189
+ C + N +V L + V EA + + S PN + Y +I G C
Sbjct: 89 KTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCK 148
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
G L A ++ +LM + G P++ ++E K + D+ + Q M +R +
Sbjct: 149 DGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEM-TRRGFQPDVI 207
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
Y +++ +CK ++ +A +++ M + G +T +S++ ++ A+++++ +
Sbjct: 208 MYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVM 267
Query: 310 EK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+ PD+ Y+ +I GL R R +A + ++M+ C P + TY ++ G
Sbjct: 268 SERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDG 320
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 135/282 (47%), Gaps = 14/282 (4%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVR------ELKKM 127
I +N ++ + + +D L++M R V D T+ + L + +L+
Sbjct: 277 INYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAA 336
Query: 128 VNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKG 186
+M GC + V++ LC+ + +A L+ ++ + P+ ++ +I
Sbjct: 337 CEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGS 396
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
C DL A KI+ +M++ +P+ +I+ K + D+A++VF++M V+
Sbjct: 397 LCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELM-VESFRP- 454
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
G++TY V+D +C G+I +A M+E M + D + ++I GL + EAY++
Sbjct: 455 GVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELF 514
Query: 307 EEIEKP----DISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+ +E ++ +Y+ L+ L + +R +A V ++I+ G
Sbjct: 515 QAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAG 556
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 86/184 (46%), Gaps = 19/184 (10%)
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA---YKVV 306
TY +I +CK GK+ QAY +L+EM RGI + +I GL GR +A +K V
Sbjct: 32 TYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTV 91
Query: 307 EEIE-KPDISLYHGLIKGLLRLRRAREATQVFREM-IKRGCEPTMHTYIMLLQGHLGKRG 364
+ PDI ++ L+ L++ R EA Q+F M C P + TY ++ G L K G
Sbjct: 92 AGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVING-LCKDG 150
Query: 365 R-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
+ G P V ++ V GL KAG++ ++ + RG + YN
Sbjct: 151 KLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYN 210
Query: 412 KFLH 415
L+
Sbjct: 211 TLLN 214
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 130/288 (45%), Gaps = 54/288 (18%)
Query: 171 EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMI----------- 219
E PNE YG LI G C G L +A ++ + M D G P + V + +I
Sbjct: 24 ERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGD 83
Query: 220 ------------------------ETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVI 255
+ K + +EA ++F+ M + TY VI
Sbjct: 84 ALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVI 143
Query: 256 DWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK---- 311
+ +CK GK+ +A +L+ M + G + +T S ++ GL GR + + +++E+ +
Sbjct: 144 NGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQ 203
Query: 312 PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG------- 364
PD+ +Y+ L+ GL + RR EA ++ + MI+ GC PT+ TY L++ +
Sbjct: 204 PDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRL 263
Query: 365 ------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
R P ++N++T+ + GL + + LD A+ + + M VP
Sbjct: 264 IQVMSERGCPPDVINYNTV-IAGLCRDAR-LDDAQALLKQMVAARCVP 309
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 151/338 (44%), Gaps = 50/338 (14%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEM--GRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
ITFN +VD + KS ++ ++ + M + L N T+ + L + +L + +
Sbjct: 101 ITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLD 160
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVG 191
+MN+ GC ++ + +V+ LC+ + L+ +++ +P+ I Y L+ G C
Sbjct: 161 LMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSR 220
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTY 251
L EA ++ LM G P++ + ++E F + + D A ++ Q+M +R + Y
Sbjct: 221 RLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMS-ERGCPPDVINY 279
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL------ARGRLREAYKV 305
VI +C+ ++ A +L++M D +T S+II GL A +L A ++
Sbjct: 280 NTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEI 339
Query: 306 VEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMI-------------------- 341
+E +++ P+ Y +I+GL R R++++A + R MI
Sbjct: 340 LEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCK 399
Query: 342 ---------------KRGCEPTMHTYIMLLQGHLGKRG 364
+R C+P Y L+ G L K G
Sbjct: 400 SHDLDAAYKIFGMMSERECKPNPVAYAALIDG-LSKGG 436
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 131/293 (44%), Gaps = 8/293 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVNFF 131
N T+ ++ + K+ +D +E L EM R + ++ L + + +F
Sbjct: 29 NEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYF 88
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI--LKLSEWIKPNEIAYGWLIKGYCD 189
+ C + N +V L + V EA + + S PN + Y +I G C
Sbjct: 89 KTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCK 148
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
G L A ++ +LM + G P++ ++E K + D+ + Q M +R +
Sbjct: 149 DGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEM-TRRGFQPDVI 207
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
Y +++ +CK ++ +A +++ M + G +T +S++ ++ A+++++ +
Sbjct: 208 MYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVM 267
Query: 310 EK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+ PD+ Y+ +I GL R R +A + ++M+ C P + TY ++ G
Sbjct: 268 SERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDG 320
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 135/282 (47%), Gaps = 14/282 (4%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVR------ELKKM 127
I +N ++ + + +D L++M R V D T+ + L + +L+
Sbjct: 277 INYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAA 336
Query: 128 VNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKG 186
+M GC + V++ LC+ + +A L+ ++ + P+ ++ +I
Sbjct: 337 CEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGS 396
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
C DL A KI+ +M++ +P+ +I+ K + D+A++VF++M V+
Sbjct: 397 LCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELM-VESFRP- 454
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
G++TY V+D +C G+I +A M+E M + D + ++I GL + EAY++
Sbjct: 455 GVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELF 514
Query: 307 EEIEKP----DISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+ +E ++ +Y+ L+ L + +R +A V ++I+ G
Sbjct: 515 QAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAG 556
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 86/184 (46%), Gaps = 19/184 (10%)
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA---YKVV 306
TY +I +CK GK+ QAY +L+EM RGI + +I GL GR +A +K V
Sbjct: 32 TYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTV 91
Query: 307 EEIE-KPDISLYHGLIKGLLRLRRAREATQVFREM-IKRGCEPTMHTYIMLLQGHLGKRG 364
+ PDI ++ L+ L++ R EA Q+F M C P + TY ++ G L K G
Sbjct: 92 AGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVING-LCKDG 150
Query: 365 R-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
+ G P V ++ V GL KAG++ ++ + RG + YN
Sbjct: 151 KLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYN 210
Query: 412 KFLH 415
L+
Sbjct: 211 TLLN 214
>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Vitis vinifera]
Length = 798
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 137/292 (46%), Gaps = 11/292 (3%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHI 133
+T N ++D++ K D +W+ L+E+ + + TF + + A+ +K V F
Sbjct: 97 VTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGK 156
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYL---ILKLSEWIKPNEIAYGWLIKGYCDV 190
M D GC+ + N ++ + Q+++ + A + +LKL+ PN + L+ G C
Sbjct: 157 MKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLN--YNPNRATFVILLNGLCKN 214
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G +A K+++ MT +G P+ + ++ + + D+ ++ M+V + T
Sbjct: 215 GKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSI-T 273
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
++D CK G+I +A+ +L+ K G SS+I GL R E + ++
Sbjct: 274 CNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMF 333
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
K PD+ LY LI+G + A + +M +RG P + Y L++G
Sbjct: 334 KAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKG 385
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 139/298 (46%), Gaps = 18/298 (6%)
Query: 77 FNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKT-FKIALMTLAEVRELKKMVNFFHIMN 135
++ ++D + +++ D E ++M + + D + I + EV + +N + M
Sbjct: 309 YSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMT 368
Query: 136 DCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLI 194
G N ++K C L+ +A+ L L++S+ P Y LI G C G L
Sbjct: 369 QRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLD 428
Query: 195 EASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL------ 248
EA +I+N M + G PSI + +I+ K + +EA +F M + + L L
Sbjct: 429 EARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGA 488
Query: 249 ------STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
++ + +++ +C+ G I +AY +L ++ G+ D +T + +I G + A
Sbjct: 489 DRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGA 548
Query: 303 YKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
+K+ E++ PD Y LI G R+ R +A +V +M+K GC P+ Y L+
Sbjct: 549 FKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLM 606
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 143/319 (44%), Gaps = 29/319 (9%)
Query: 63 TQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEV 121
T K C +SIT N ++D K ID + LQ + V K + + L
Sbjct: 261 TMKVSGC-CPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRA 319
Query: 122 RELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAY 180
+ ++ + M G E + + +++ C+ +V A ++ +++ + P+ Y
Sbjct: 320 KRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCY 379
Query: 181 GWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
LIKG+CDVG L +A + ++ P+ +I + DEA ++F
Sbjct: 380 NALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFN---- 435
Query: 241 KRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEM-----------FKRGIE--ADN 283
+M++LG S T+ +ID +CK G++ +A + +M +G + D
Sbjct: 436 -QMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDT 494
Query: 284 LTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFRE 339
+L +++ L G + +AYK++ ++ PDI Y+ LI G + + A ++FRE
Sbjct: 495 ASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRE 554
Query: 340 MIKRGCEPTMHTYIMLLQG 358
+ +G P TY L+ G
Sbjct: 555 LQLKGHSPDSVTYGTLIDG 573
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 118/220 (53%), Gaps = 11/220 (5%)
Query: 146 LNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
L +V+ LC+ L+++A L+++L++ + P+ + Y LI G+C ++ A K++ +
Sbjct: 497 LQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQ 556
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
+G P +I+ F +++++++A +V M VK + Y+ ++ W C++GK+
Sbjct: 557 LKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQM-VKNGCTPSSAVYKCLMTWSCRKGKL 615
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE----IEKPDISLYHGL 320
S A+++ + + ++ TL + +G L +A + + E + +I+ Y
Sbjct: 616 SVAFSLWLKYLRSLPSQEDETL-KLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIW 674
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMH--TYIMLLQG 358
+ GL + RR+ EA ++F ++ + C+ ++ + +ML+ G
Sbjct: 675 LIGLCQARRSEEALKIF--LVLKECQMDVNPPSCVMLING 712
>gi|255564599|ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537382|gb|EEF39010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 544
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 158/342 (46%), Gaps = 13/342 (3%)
Query: 24 SRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDI 83
S LH S C N+ F+ + N+ L+ +P + + + + + N +++
Sbjct: 119 SDLHKSQIKCGENI----FINVIRNYGLAGKPDFALRTFIRIQDFNVQRSVRSLNTLLNA 174
Query: 84 IGKSRNIDLFWETLQEMGRRR--LVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEY 141
+++ DL + + L N T I + L + +++ V M G
Sbjct: 175 FVQNKRYDLVHAMFKNCRSKYGVLPNVFTCNILIKALCKKNDVESAVKVLDEMPAMGMIP 234
Query: 142 SLEMLNKVVKTLCQRKLVVEAKYLILKLSE--WIKPNEIAYGWLIKGYCDVGDLIEASKI 199
++ ++ R +V A + +L + W+ P+ Y L+ GYC+ G L +A K+
Sbjct: 235 NVVTYTTILGGYSSRGDMVNANKVFGELFDRGWL-PDATTYTILMNGYCEQGRLADAIKL 293
Query: 200 WNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMC 259
+ M + G EP+ M+E + K K EA + M ++R + VID +C
Sbjct: 294 MDDMGENGVEPNEVTYGVMVEAYCKEKKAGEARNLLDDM-LERQYVPSSALCCKVIDVLC 352
Query: 260 KRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK---PDISL 316
+ GKI +A + + M K+ DN +S++I+ L G++ EA K+ E E+ P +
Sbjct: 353 EAGKIEEACELWKRMLKKNCMPDNAIMSTLIHWLCKEGKVWEARKLFGEFERGAIPSLLT 412
Query: 317 YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
Y+ LI G+ EA +++ +M+++G +P TY ML++G
Sbjct: 413 YNTLIAGMCEKGELSEAGKLWDDMMEKGYKPNAFTYNMLIKG 454
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 149/303 (49%), Gaps = 13/303 (4%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
N T N ++ + K +++ + L EM ++ N T+ L + ++ F
Sbjct: 200 NVFTCNILIKALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTILGGYSSRGDMVNANKVF 259
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
+ D G ++ C++ + +A L+ + E ++PNE+ YG +++ YC
Sbjct: 260 GELFDRGWLPDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEAYCKE 319
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM--DDLGL 248
EA + + M + + PS + K+I+ + K +EA ++++ M K D+ +
Sbjct: 320 KKAGEARNLLDDMLERQYVPSSALCCKVIDVLCEAGKIEEACELWKRMLKKNCMPDNAIM 379
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV--- 305
ST +I W+CK GK+ +A + E F+RG LT +++I G+ +G L EA K+
Sbjct: 380 ST---LIHWLCKEGKVWEARKLFGE-FERGAIPSLLTYNTLIAGMCEKGELSEAGKLWDD 435
Query: 306 -VEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
+E+ KP+ Y+ LIKG ++ A+E ++ EM+ C P TY +L++ L K G
Sbjct: 436 MMEKGYKPNAFTYNMLIKGFSKIGNAKEGIRILEEMLDNRCMPNKSTYAILIE-ELCKMG 494
Query: 365 RKG 367
+G
Sbjct: 495 MEG 497
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 104/218 (47%), Gaps = 7/218 (3%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALM-TLAEVRELKKMVNFF 131
N +T+ MV+ K + L +M R+ V ++ L E ++++ +
Sbjct: 305 NEVTYGVMVEAYCKEKKAGEARNLLDDMLERQYVPSSALCCKVIDVLCEAGKIEEACELW 364
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVG 191
M C +++ ++ LC+ V EA+ L + P+ + Y LI G C+ G
Sbjct: 365 KRMLKKNCMPDNAIMSTLIHWLCKEGKVWEARKLFGEFERGAIPSLLTYNTLIAGMCEKG 424
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTY 251
+L EA K+W+ M ++G++P+ + +I+ F KI E +++ + M R STY
Sbjct: 425 ELSEAGKLWDDMMEKGYKPNAFTYNMLIKGFSKIGNAKEGIRILEEMLDNRCMP-NKSTY 483
Query: 252 RIVIDWMCK---RGKISQAYTMLEEMFKRGIEADNLTL 286
I+I+ +CK G++ + +M M G+++D+ L
Sbjct: 484 AILIEELCKMGMEGEVDKVVSM--AMASGGVDSDSWDL 519
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 110/248 (44%), Gaps = 7/248 (2%)
Query: 102 RRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVE 161
R L + T+ I + E L + M + G E + +V+ C+ K E
Sbjct: 265 RGWLPDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGE 324
Query: 162 AKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIE 220
A+ L+ + E P+ +I C+ G + EA ++W M + P ++ +I
Sbjct: 325 ARNLLDDMLERQYVPSSALCCKVIDVLCEAGKIEEACELWKRMLKKNCMPDNAIMSTLIH 384
Query: 221 TFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIE 280
K K EA K+F +R L TY +I MC++G++S+A + ++M ++G +
Sbjct: 385 WLCKEGKVWEARKLFG--EFERGAIPSLLTYNTLIAGMCEKGELSEAGKLWDDMMEKGYK 442
Query: 281 ADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQV 336
+ T + +I G G +E +++EE+ P+ S Y LI+ L ++ E +V
Sbjct: 443 PNAFTYNMLIKGFSKIGNAKEGIRILEEMLDNRCMPNKSTYAILIEELCKMGMEGEVDKV 502
Query: 337 FREMIKRG 344
+ G
Sbjct: 503 VSMAMASG 510
>gi|242061252|ref|XP_002451915.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
gi|241931746|gb|EES04891.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
Length = 571
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 143/311 (45%), Gaps = 15/311 (4%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL--VNDKTFKIALM 116
FF++ K + + H++ T+ ++ + W+ +QEM R + V +
Sbjct: 109 FFRWAAKRRN-YEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSEVVR 167
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE--WIK 174
L + + K + F+ + C+ + + N ++ L + L ++S
Sbjct: 168 MLGNAKMVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSTEGHCF 227
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+ + Y LI +C +G A ++ N M D G +P+ + ++ FFK+N A+ +
Sbjct: 228 PDTMTYSALISAFCKLGRRDSAIQLLNEMKDNGMQPTTKIYTMLVALFFKLNDVHGALSL 287
Query: 235 FQMMRVK--RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
F+ MR + R D + TY +I + K G+I +AY EM + G D + ++++I
Sbjct: 288 FEEMRHQYCRPD---VFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTIVMNNMINF 344
Query: 293 LLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLR-RAREATQVFREMIKRGCEP 347
L GRL +A K+ +E+ P + Y+ +IK L + RA E F M + G P
Sbjct: 345 LGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISP 404
Query: 348 TMHTYIMLLQG 358
+ TY +L+ G
Sbjct: 405 SSFTYSILIDG 415
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 159/394 (40%), Gaps = 82/394 (20%)
Query: 43 LQICNNFPLSWRPVYLFFQY-TQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMG 101
+++ N + + + +F+Q T+K QP + +N M+ ++ + E EM
Sbjct: 166 VRMLGNAKMVSKAIAIFYQIKTRKCQP----TAQAYNSMIIMLMHEGQYEKVHELYNEMS 221
Query: 102 RRR--LVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLV 159
+ T+ + ++ + + M D G + + ++ +V + V
Sbjct: 222 TEGHCFPDTMTYSALISAFCKLGRRDSAIQLLNEMKDNGMQPTTKIYTMLVALFFKLNDV 281
Query: 160 VEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKM 218
A L ++ ++ +P+ Y LI+G G + EA + M EG P V++ M
Sbjct: 282 HGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTIVMNNM 341
Query: 219 IETFFKINKDDEAMKVFQMMRV-------------------------------KRMDDLG 247
I K + D+AMK+FQ M +RM + G
Sbjct: 342 INFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESG 401
Query: 248 LS----TYRIVIDWMCKRGKISQAYTMLEEMFKRG------------------------- 278
+S TY I+ID CK ++ +A +LEEM ++G
Sbjct: 402 ISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLAC 461
Query: 279 -----IEADNLTLSSIIYGLLAR-----GRLREAYKVVEEIEK----PDISLYHGLIKGL 324
++ + + SS +Y ++ + GRL +A + +E+ K PD+ Y+ L+ GL
Sbjct: 462 ELFQELKENCGSSSSRVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGL 521
Query: 325 LRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
R EA R M + GC P +++Y ++L G
Sbjct: 522 ARTGMLDEALSTMRRMQEHGCIPDINSYNIILNG 555
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 57/129 (44%), Gaps = 6/129 (4%)
Query: 68 PCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRR-RLVNDKTFKIALMTLAEVRELKK 126
PC A + ++D +GK++ DL E QE+ + + + + + L + L
Sbjct: 439 PCPA----AYCSLIDALGKAKRYDLACELFQELKENCGSSSSRVYAVMIKHLGKAGRLDD 494
Query: 127 MVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIK 185
+N F MN GC + N ++ L + ++ EA + ++ E P+ +Y ++
Sbjct: 495 AINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILN 554
Query: 186 GYCDVGDLI 194
G DLI
Sbjct: 555 GLQKQEDLI 563
>gi|224110770|ref|XP_002315631.1| predicted protein [Populus trichocarpa]
gi|222864671|gb|EEF01802.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 150/366 (40%), Gaps = 64/366 (17%)
Query: 21 SPESRLHSSLSSCNFNLTHEFFLQICNNFPLS--------------WRPVYLFFQYTQKA 66
+ ++R+ SS +L E Q+C+N +S W+ F++
Sbjct: 11 AAKARVGSSPDEILLSLADE---QVCDNIEVSNDLVDKLLLRFKDDWKSALGVFRWA-GL 66
Query: 67 QPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKK 126
+P + H ++ MVDI+GK + +D E L+EM R LV T A+ + + +
Sbjct: 67 RPGYKHRPEAYDMMVDILGKMKQMDQMRELLEEMNRNHLVTLNTVGKAMRRFSGAGKWED 126
Query: 127 MVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKG 186
V F + G E + E +N ++ TLC+ V +A+ + L+L I PN + I G
Sbjct: 127 AVRMFDELGTFGLEKNAESMNLLLDTLCKEGKVEQARAIFLELKSHILPNAHTFNIFIHG 186
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
+C + EA M F P +
Sbjct: 187 WCKANLVDEAHWTLQEMKGHAFRPCV---------------------------------- 212
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
+Y +I + C++ S+ Y +L+EM +G + +T ++II L EA ++
Sbjct: 213 --ISYSTIILFYCRQHNFSKVYELLDEMEAQGCPPNVVTYTTIIVFLAKSQNTEEALQLT 270
Query: 307 EEIE----KPDISLYHGLIKGLLRLRRAREATQVF-REMIKRGCEPTMHTY-----IMLL 356
+ ++ KPD ++ LI L R R +EA VF +EM G TY ++
Sbjct: 271 QRMKSAGCKPDTPFFNSLIYILGRAGRFQEAVDVFEKEMPNAGVSRDTSTYNSMIAMLCH 330
Query: 357 QGHLGK 362
GH+ K
Sbjct: 331 HGHVSK 336
>gi|224120112|ref|XP_002331139.1| predicted protein [Populus trichocarpa]
gi|222872867|gb|EEF09998.1| predicted protein [Populus trichocarpa]
Length = 329
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 147/296 (49%), Gaps = 8/296 (2%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHIM 134
T+ ++D G S ID +EM + + D + + + ++ K+ F +
Sbjct: 3 TYTLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFDEL 62
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDL 193
+ G ++ ++ +C+ + A+ L+ ++ + + N++ Y LI GYC G +
Sbjct: 63 TEKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRGLI 122
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
EA K+ +M +GFE I ++ + + K+N+ +EA K + + +++ + +Y
Sbjct: 123 DEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEA-KRWLLTMIEKGVVPNVVSYTT 181
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK-- 311
+ID CK G +A + +EM K G E + +T + +I G +GR++EAY++ +E+
Sbjct: 182 LIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAKG 241
Query: 312 --PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
PDI Y L+ G + +A ++F E+ ++G + TY ++ G L K GR
Sbjct: 242 IFPDIYTYTSLLHGECIFGKLDDAVELFNEVRQKGLPLNVVTYTAIISG-LSKEGR 296
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 124/275 (45%), Gaps = 23/275 (8%)
Query: 179 AYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
Y LI + G + E +++ M ++G + I V +I KI A +F +
Sbjct: 3 TYTLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFDEL 62
Query: 239 RVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR 298
K + + TY +ID +CK G++ A ++ EM RG++ + L +++I G RG
Sbjct: 63 TEKGLV-ANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRGL 121
Query: 299 LREAYKVVEEIEKP----DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIM 354
+ EA+KV +EK DI + + GL +L + EA + MI++G P + +Y
Sbjct: 122 IDEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYTT 181
Query: 355 LLQGHLGKRG-------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNR 401
L+ + K G + G +P + + G K G+ +A + + + +
Sbjct: 182 LIDIYC-KEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAK 240
Query: 402 GVEVPRFDYNKFLH----YYSNEEGVVMFEEVGKK 432
G+ + Y LH + ++ V +F EV +K
Sbjct: 241 GIFPDIYTYTSLLHGECIFGKLDDAVELFNEVRQK 275
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 115/276 (41%), Gaps = 39/276 (14%)
Query: 54 RPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFK 112
R LF + T+K H T+ ++D + K+ ++ + EM R L VN +
Sbjct: 54 RAFALFDELTEKGLVANVH---TYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYN 110
Query: 113 IALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAK-YLILKLSE 171
+ + + + IM G E + LN + L + EAK +L+ + +
Sbjct: 111 TLIDGYCKRGLIDEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEK 170
Query: 172 WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEA 231
+ PN ++Y LI YC G+ +EA K++ M G EP+ + +I+ K + EA
Sbjct: 171 GVVPNVVSYTTLIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEA 230
Query: 232 MKVFQMMRVK--------------------RMDD--------------LGLSTYRIVIDW 257
++ MR K ++DD L + TY +I
Sbjct: 231 YELRDEMRAKGIFPDIYTYTSLLHGECIFGKLDDAVELFNEVRQKGLPLNVVTYTAIISG 290
Query: 258 MCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
+ K G+ +A+ + +EM + G+ D+ +S++ L
Sbjct: 291 LSKEGRSEEAFKLYDEMTEAGLTPDDRVYTSLVSSL 326
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 95/208 (45%), Gaps = 20/208 (9%)
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
++TY ++IDW GKI + M EEM ++GI+AD + +I G + A+ + +
Sbjct: 1 VATYTLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFD 60
Query: 308 EIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
E+ + ++ Y LI G+ + A + EM RG + Y L+ G+ KR
Sbjct: 61 ELTEKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYC-KR 119
Query: 364 G-------------RKG-PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFD 409
G +KG + + +TI GL K + +A +++ ++ +GV
Sbjct: 120 GLIDEAFKVQVIMEKKGFENDIYTLNTI-ADGLRKLNQPEEAKRWLLTMIEKGVVPNVVS 178
Query: 410 YNKFLHYYSNEEGVVMFEEVGKKLREVG 437
Y + Y E V +++ +++++ G
Sbjct: 179 YTTLIDIYCKEGNFVEAKKLFQEMKKAG 206
>gi|297743291|emb|CBI36158.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 152/308 (49%), Gaps = 10/308 (3%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRR-LVNDKTFKIALMT 117
FF++ K + F H+S T+ ++ + ++ + W+T+QEM R ++ +
Sbjct: 110 FFKWAGKRRN-FEHDSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKV 168
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW--IKP 175
L + + + K ++ F+ + C+ + N ++ L Q + L ++ P
Sbjct: 169 LGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLP 228
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
+ + Y LI + +G A +++ M + G P+ + ++ +FK+ + ++A+ +
Sbjct: 229 DTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLV 288
Query: 236 QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
Q M+ K L + TY +I + K GK+ +AY++ M K G + D + ++++I L
Sbjct: 289 QEMKEKGCA-LTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGK 347
Query: 296 RGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLR-RAREATQVFREMIKRGCEPTMH 350
GRL +A K+ EE+E P++ Y+ +IK L + RA EA + +M + G P+
Sbjct: 348 AGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSF 407
Query: 351 TYIMLLQG 358
TY +L+ G
Sbjct: 408 TYSILIDG 415
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 92/398 (23%), Positives = 174/398 (43%), Gaps = 59/398 (14%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
+++T++ ++ GK D EM L K + L ++ ++K +
Sbjct: 229 DTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLV 288
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDV 190
M + GC ++ +++K + + V EA + + L E KP+ + LI
Sbjct: 289 QEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKA 348
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKIN-KDDEAMKVFQMMRVKRMDDLGLS 249
G L +A K++ M P++ + +I+ F+ + EA ++ M+ +
Sbjct: 349 GRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSF- 407
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGI--------------------EADNLTL--- 286
TY I+ID CK ++ +A +LEEM ++G EA N
Sbjct: 408 TYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQEL 467
Query: 287 -------SSIIYGLLAR-----GRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRA 330
S+ +Y ++ + GRL EA + E++K PD+ Y+ L+ G++R+
Sbjct: 468 RENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMT 527
Query: 331 REATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKG--------------PDPLVNFDT 376
EA + R M + GC P ++++ ++L G G KG PD +V+++T
Sbjct: 528 DEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPD-VVSYNT 586
Query: 377 IFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
+ +G L +AG +AAK ++ + ++G E Y+ L
Sbjct: 587 V-LGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSIL 623
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/328 (21%), Positives = 132/328 (40%), Gaps = 49/328 (14%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTL-AEVRELKKMVNFFHIM 134
T+ ++ +GK+ ++ + M + D L+ L + L + F M
Sbjct: 302 TYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEM 361
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLIL-KLSE-WIKPNEIAYGWLIKGYCDVGD 192
C ++ N V+K L + K +L K+ E + P+ Y LI G+C
Sbjct: 362 ESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNR 421
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST-- 250
+ +A + M ++GF P +I K + + A ++FQ +R ++ G S+
Sbjct: 422 VEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELR----ENCGYSSAR 477
Query: 251 -YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
Y ++I + K G++S+A + EM K G D ++++ G++ G EA+ ++ +
Sbjct: 478 VYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTM 537
Query: 310 E---------------------------------------KPDISLYHGLIKGLLRLRRA 330
E KPD+ Y+ ++ L R
Sbjct: 538 EENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMF 597
Query: 331 REATQVFREMIKRGCEPTMHTYIMLLQG 358
EA ++ +EM +G E + TY +L+
Sbjct: 598 EEAAKLMKEMNSKGFEYDLITYSSILEA 625
>gi|115466100|ref|NP_001056649.1| Os06g0125300 [Oryza sativa Japonica Group]
gi|6983867|dbj|BAA90802.1| salt-inducible protein-like [Oryza sativa Japonica Group]
gi|113594689|dbj|BAF18563.1| Os06g0125300 [Oryza sativa Japonica Group]
gi|125553869|gb|EAY99474.1| hypothetical protein OsI_21443 [Oryza sativa Indica Group]
gi|125595884|gb|EAZ35664.1| hypothetical protein OsJ_19951 [Oryza sativa Japonica Group]
Length = 535
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 131/296 (44%), Gaps = 30/296 (10%)
Query: 112 KIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-S 170
I L L + +L + M G + V+ C + + A+ L + +
Sbjct: 197 NILLKGLVGIGDLDAALKVLDEMPGLGITPDVVTYTTVLSAYCGKGDIEGAQKLFDDIIA 256
Query: 171 EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDE 230
+P+ Y LI GYC G+L +A++I + M +P+ +IE K K E
Sbjct: 257 SGRRPDVTMYTVLIDGYCQCGNLQDAARIMDEMEAARVQPNEVTYSVVIEACCKEEKPIE 316
Query: 231 AMKVF-QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSI 289
A +M+ + D L V+D +C+ GK +AY + M K+ + DN+ S++
Sbjct: 317 ARDFMREMLGAGYVPDTALGAK--VVDVLCQDGKSEEAYQLWRWMEKKNVPPDNMVTSTL 374
Query: 290 IYGLLARGRLREAYKVVEEIE---KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
IY L G +REA + +E+E KP + Y+ LI GL +EA +V+ +M++RG E
Sbjct: 375 IYWLCKNGMVREARNLFDELERGFKPSLLTYNSLISGLCENEELQEAGRVWDDMVERGYE 434
Query: 347 PTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
P TY L++ GL K GK + A E +++RG
Sbjct: 435 PNAMTYEALIK-----------------------GLCKTGKPNEGATVFEEMVSRG 467
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 133/278 (47%), Gaps = 12/278 (4%)
Query: 89 NIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLN 147
++D + L EM + D T+ L +++ F + G + M
Sbjct: 208 DLDAALKVLDEMPGLGITPDVVTYTTVLSAYCGKGDIEGAQKLFDDIIASGRRPDVTMYT 267
Query: 148 KVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDE 206
++ CQ + +A ++ ++ + ++PNE+ Y +I+ C IEA M
Sbjct: 268 VLIDGYCQCGNLQDAARIMDEMEAARVQPNEVTYSVVIEACCKEEKPIEARDFMREMLGA 327
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM--DDLGLSTYRIVIDWMCKRGKI 264
G+ P + K+++ + K +EA ++++ M K + D++ ST +I W+CK G +
Sbjct: 328 GYVPDTALGAKVVDVLCQDGKSEEAYQLWRWMEKKNVPPDNMVTST---LIYWLCKNGMV 384
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV----VEEIEKPDISLYHGL 320
+A + +E+ +RG + LT +S+I GL L+EA +V VE +P+ Y L
Sbjct: 385 REARNLFDEL-ERGFKPSLLTYNSLISGLCENEELQEAGRVWDDMVERGYEPNAMTYEAL 443
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
IKGL + + E VF EM+ RGC+P+ + +L+
Sbjct: 444 IKGLCKTGKPNEGATVFEEMVSRGCKPSSLLFQVLVDS 481
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 62/141 (43%), Gaps = 36/141 (25%)
Query: 153 LCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSI 212
LC+ +V EA+ L +L KP+ + Y LI G C+ +L EA ++W+ M + G+EP+
Sbjct: 378 LCKNGMVREARNLFDELERGFKPSLLTYNSLISGLCENEELQEAGRVWDDMVERGYEPN- 436
Query: 213 DVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLE 272
AM TY +I +CK GK ++ T+ E
Sbjct: 437 ------------------AM-----------------TYEALIKGLCKTGKPNEGATVFE 461
Query: 273 EMFKRGIEADNLTLSSIIYGL 293
EM RG + +L ++ L
Sbjct: 462 EMVSRGCKPSSLLFQVLVDSL 482
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEA 196
G + SL N ++ LC+ + + EA + + E +PN + Y LIKG C G E
Sbjct: 397 GFKPSLLTYNSLISGLCENEELQEAGRVWDDMVERGYEPNAMTYEALIKGLCKTGKPNEG 456
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
+ ++ M G +PS + ++++ + +D K+ +
Sbjct: 457 ATVFEEMVSRGCKPSSLLFQVLVDSLSEPRHEDTIRKILE 496
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/405 (21%), Positives = 167/405 (41%), Gaps = 73/405 (18%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHIM 134
T + ++ + K+ +D L+ M +R D T + + L + ++++ F M
Sbjct: 51 TCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGM 110
Query: 135 NDCGCEYSLEML--NKVVKTLCQRKLVVEAKYLILKL--SEWIKPNEIAYGWLIKGYCDV 190
N + N ++ +LC+ K V +A + + + P+ ++Y LI G+C +
Sbjct: 111 NRTISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKI 170
Query: 191 GDLIEASKIWNLMTD-----------------------------------EGFEPSIDVV 215
+L A K++ M D G P +
Sbjct: 171 DELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITY 230
Query: 216 DKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMF 275
+I F K D+A ++F+ M + R TY ++ +CK K +A+ + +M
Sbjct: 231 STLIHGFSLARKHDQAHELFEAM-ISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMV 289
Query: 276 KRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAR 331
+RG + D +T ++++YG G++ +A +V +E+ PD+ Y+ L+KG R +
Sbjct: 290 ERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPG 349
Query: 332 EATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDA 391
EA Q+F+ M+ R C+P ++ I + GL KA + DA
Sbjct: 350 EARQLFQVMVSRECKPDTVSH-----------------------NIMIDGLSKAKRLDDA 386
Query: 392 AKYVERV-MNRGVEVPRFDYNKFLHYYSNE----EGVVMFEEVGK 431
+ ER+ + G YN + E E + +F+E+ +
Sbjct: 387 VEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDR 431
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 113/221 (51%), Gaps = 7/221 (3%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T+ + + R+ + F M GC + N ++ LC+ EA L K+
Sbjct: 229 TYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKM 288
Query: 170 SE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
E P+++ Y L+ G+C+VG + +A ++++ M +G +P + + +++ FF+ K
Sbjct: 289 VERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKP 348
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFK-RGIEADNLTLS 287
EA ++FQ+M V R ++ I+ID + K ++ A + E M + G D +T +
Sbjct: 349 GEARQLFQVM-VSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYN 407
Query: 288 SIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGL 324
S+I+GL RL EA KV +EI++ PD ++ L++ +
Sbjct: 408 SLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAM 448
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 147/339 (43%), Gaps = 49/339 (14%)
Query: 63 TQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDK-TFKIALMTLAE 120
+ +A CF++NS +++ + K++ + + M R +V D ++ I + +
Sbjct: 115 STRASSCFSYNS-----LLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCK 169
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIA 179
+ EL + + M D C ++ N + L ++ + +A+ + ++ S P+ I
Sbjct: 170 IDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVIT 229
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
Y LI G+ +A +++ M G P+ + ++ K +K DEA ++F+ M
Sbjct: 230 YSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKM- 288
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG-- 297
V+R D TY ++ C GKI QA + +EM +G + D + + ++ G G
Sbjct: 289 VERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKP 348
Query: 298 ---------------------------------RLREAYKVVEEIEK-----PDISLYHG 319
RL +A +V E +E+ PD+ Y+
Sbjct: 349 GEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNS 408
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
LI GL +R EA +VF+E+ + P H + +LL+
Sbjct: 409 LIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEA 447
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 127/299 (42%), Gaps = 25/299 (8%)
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ-MMRVK 241
+I+ C G + A + M G+ P + +I K +K EA + Q M R
Sbjct: 55 VIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTI 114
Query: 242 RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMF-KRGIEADNLTLSSIIYGLLA---RG 297
+Y +++ +CK K+ QA+ + M +R + D ++ S +I G G
Sbjct: 115 STRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELG 174
Query: 298 RLREAYKVVEEIEK-PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
R + YK + ++ P+++ Y+ + GL+R R +A V+ EMI GC P + TY L+
Sbjct: 175 RAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLI 234
Query: 357 QGHLGKRGR------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVE 404
G R +G P + GL K K +A + +++ RG +
Sbjct: 235 HGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCD 294
Query: 405 VPRFDYNKFLHYYSN----EEGVVMFEEVGKKLRE---VGLADLADIFQRYGKKMATRE 456
+ Y L+ + N E+ V +F+E+ K + V L F R GK R+
Sbjct: 295 PDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQ 353
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 98/226 (43%), Gaps = 2/226 (0%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHI 133
IT++ ++ +R D E + M R N T+ L L + + + F
Sbjct: 228 ITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRK 287
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGD 192
M + GC+ ++ C + +A + ++ S+ P+ +AY L+KG+ G
Sbjct: 288 MVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGK 347
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
EA +++ +M +P + MI+ K + D+A++VF+ M L TY
Sbjct: 348 PGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYN 407
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR 298
+I +C ++S+A + +E+ + + D + ++ + A G
Sbjct: 408 SLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAGH 453
>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 137/292 (46%), Gaps = 11/292 (3%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHI 133
+T N ++D++ K D +W+ L+E+ + + TF + + A+ +K V F
Sbjct: 97 VTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGK 156
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYL---ILKLSEWIKPNEIAYGWLIKGYCDV 190
M D GC+ + N ++ + Q+++ + A + +LKL+ PN + L+ G C
Sbjct: 157 MKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLN--YNPNRATFVILLNGLCKN 214
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G +A K+++ MT +G P+ + ++ + + D+ ++ M+V + T
Sbjct: 215 GKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSI-T 273
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
++D CK G+I +A+ +L+ K G SS+I GL R E + ++
Sbjct: 274 CNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMF 333
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
K PD+ LY LI+G + A + +M +RG P + Y L++G
Sbjct: 334 KAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKG 385
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 141/344 (40%), Gaps = 51/344 (14%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAE 120
Y Q + + N TF +++ + K+ D + EM ++ + N + I L L +
Sbjct: 189 YNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQ 248
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLIL------------- 167
+ + + M GC N ++ C+ + EA L+
Sbjct: 249 AKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKG 308
Query: 168 ---------------KLSEW--------IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
++ EW I+P+ + Y LI+G+C+VG + A + N MT
Sbjct: 309 YSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMT 368
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS-TYRIVIDWMCKRGK 263
G P + +I+ F + D+A + + + + D S TY I+I MC+ G
Sbjct: 369 QRGLSPDTYCYNALIKGFCDVGLLDKARSL--QLEISKNDCFPTSCTYTILICGMCRNGL 426
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-KPDISLYHGLIK 322
+ +A + +M G +T +++I GL G L EA + ++E + SL+ L +
Sbjct: 427 LDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQ 486
Query: 323 ----------GLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
G R+ R +A +V +M+K GC P+ Y L+
Sbjct: 487 GADRVMDTANGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLM 530
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 143/331 (43%), Gaps = 52/331 (15%)
Query: 77 FNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKT-FKIALMTLAEVRELKKMVNFFHIMN 135
++ ++D + +++ D E ++M + + D + I + EV + +N + M
Sbjct: 309 YSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMT 368
Query: 136 DCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLI 194
G N ++K C L+ +A+ L L++S+ P Y LI G C G L
Sbjct: 369 QRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLD 428
Query: 195 EASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM---------------- 238
EA +I+N M + G PSI + +I+ K + +EA +F M
Sbjct: 429 EARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGA 488
Query: 239 -----------RVKRMDDL--------------GLSTYRIVIDWMCKRGKISQAYTMLEE 273
RV R +D + Y+ ++ W C++GK+S A+++ +
Sbjct: 489 DRVMDTANGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLK 548
Query: 274 MFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE----IEKPDISLYHGLIKGLLRLRR 329
+ ++ TL + +G L +A + + E + +I+ Y + GL + RR
Sbjct: 549 YLRSLPSQEDETL-KLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARR 607
Query: 330 AREATQVFREMIKRGCEPTMH--TYIMLLQG 358
+ EA ++F ++ + C+ ++ + +ML+ G
Sbjct: 608 SEEALKIF--LVLKECQMDVNPPSCVMLING 636
>gi|326513918|dbj|BAJ92109.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 459
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 136/299 (45%), Gaps = 7/299 (2%)
Query: 65 KAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRE 123
+A+P F+ ++ F+ ++ + ++R W +M L ++ TF + + R
Sbjct: 103 RAKPNFSPSADHFDALLLPLARARLFTHLWTQASDMRALGLPLSPATFSAVISSYGHSRL 162
Query: 124 LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGW 182
++ V F+ + GC + E+ N ++ LC A L+ +++ + + P+ +
Sbjct: 163 AEQAVEVFNRLPHFGCPQTTEVYNALLDALCANGNFAGAYKLLRRMARKGVAPDRATFST 222
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
L+ +C G L EA + M GF P + D +++ + + +EA K F + K
Sbjct: 223 LVDAWCASGKLREAQAFLDDMATRGFRPPVRGRDLLVDGLVRAGRLEEA-KAFALRITKE 281
Query: 243 MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
++T+ + +C G + A +L + RG+ D T ++ + GR+ EA
Sbjct: 282 GVLPDVATFNSLAQALCDAGDVEFAVGLLADASSRGMCPDISTYKVMLPAVAKAGRIEEA 341
Query: 303 ----YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
Y +E+ +P SLY ++K L + R +A F +M +G P Y+ML++
Sbjct: 342 FRLFYAAIEDGHRPFPSLYAAIVKALCKAGRFADAFAFFGDMKSKGHPPNRPVYVMLVK 400
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 90/214 (42%), Gaps = 28/214 (13%)
Query: 197 SKIWNLMTDE---GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS---- 249
+ +W +D G S +I ++ ++A++VF R+ G
Sbjct: 129 THLWTQASDMRALGLPLSPATFSAVISSYGHSRLAEQAVEVFN-----RLPHFGCPQTTE 183
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
Y ++D +C G + AY +L M ++G+ D T S+++ A G+LREA ++++
Sbjct: 184 VYNALLDALCANGNFAGAYKLLRRMARKGVAPDRATFSTLVDAWCASGKLREAQAFLDDM 243
Query: 310 E----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ-------- 357
+P + L+ GL+R R EA + K G P + T+ L Q
Sbjct: 244 ATRGFRPPVRGRDLLVDGLVRAGRLEEAKAFALRITKEGVLPDVATFNSLAQALCDAGDV 303
Query: 358 ----GHLGKRGRKGPDPLVNFDTIFVGGLVKAGK 387
G L +G P ++ + + + KAG+
Sbjct: 304 EFAVGLLADASSRGMCPDISTYKVMLPAVAKAGR 337
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 101/287 (35%), Gaps = 55/287 (19%)
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEI-AYGWLIKGYCDVGD 192
M G S + V+ + +L +A + +L + P Y L+ C G+
Sbjct: 138 MRALGLPLSPATFSAVISSYGHSRLAEQAVEVFNRLPHFGCPQTTEVYNALLDALCANGN 197
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
A K+ M +G P D A T+
Sbjct: 198 FAGAYKLLRRMARKGVAP------------------DRA------------------TFS 221
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK- 311
++D C GK+ +A L++M RG ++ GL+ GRL EA I K
Sbjct: 222 TLVDAWCASGKLREAQAFLDDMATRGFRPPVRGRDLLVDGLVRAGRLEEAKAFALRITKE 281
Query: 312 ---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR--- 365
PD++ ++ L + L A + + RG P + TY ++L + K GR
Sbjct: 282 GVLPDVATFNSLAQALCDAGDVEFAVGLLADASSRGMCPDISTYKVMLPA-VAKAGRIEE 340
Query: 366 ----------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
G P + V L KAG+ DA + + ++G
Sbjct: 341 AFRLFYAAIEDGHRPFPSLYAAIVKALCKAGRFADAFAFFGDMKSKG 387
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 33/164 (20%), Positives = 70/164 (42%), Gaps = 2/164 (1%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHIM 134
TFN + + + +++ L + R + D T+K+ L +A+ +++ F+
Sbjct: 289 TFNSLAQALCDAGDVEFAVGLLADASSRGMCPDISTYKVMLPAVAKAGRIEEAFRLFYAA 348
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDL 193
+ G + +VK LC+ +A + S+ PN Y L+K G
Sbjct: 349 IEDGHRPFPSLYAAIVKALCKAGRFADAFAFFGDMKSKGHPPNRPVYVMLVKMCVRGGRF 408
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQM 237
++A+ M++ GF P + +++ + K D A ++ Q+
Sbjct: 409 LDAANYLLEMSEAGFAPRAPTFNVVVDGLRHLGKHDLARRMEQL 452
>gi|255660860|gb|ACU25599.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 418
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 139/300 (46%), Gaps = 46/300 (15%)
Query: 104 RLVNDKTFKIALMTLAEVRE-------LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQR 156
RL +F++ T V E K + F+ + +CG SL N ++ C+
Sbjct: 90 RLTKKHSFRVPFDTCRNVLEHLMKXKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKE 149
Query: 157 KLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVV 215
+ A+ + +++W ++P+ +++ L+ GY +GDL E ++ N M G +P +
Sbjct: 150 GEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMRASGVQPDVYTY 209
Query: 216 DKMIETFFKINKDDEAMKVFQMMR------------------------------VKRMDD 245
+I K ++ DEA +F M ++M +
Sbjct: 210 SVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGHCKNGRLDLAMDIYRQMLN 269
Query: 246 LGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
G S TY +I +CK+G + QA +L+EM ++G++ D +T +++I G G L
Sbjct: 270 QGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKITYTTLIDGSCKEGDLET 329
Query: 302 AYKVVEEIEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
A+++ E + K I L Y LI GL + RA +A ++ REM++ G +P TY M++
Sbjct: 330 AFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKMLREMLRVGLKPDDETYTMIMN 389
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 106/225 (47%), Gaps = 6/225 (2%)
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDV 190
+ M G + + + ++ LC+ + EA L + L + PN + + LI G+C
Sbjct: 195 NAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGHCKN 254
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G L A I+ M ++GF P + + +I K +A + M K + + T
Sbjct: 255 GRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKI-T 313
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y +ID CK G + A+ + E M K I D++ +++I+GL GR +A K++ E+
Sbjct: 314 YTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKMLREML 373
Query: 311 ----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
KPD Y ++ + ++A+++ REM + G P + T
Sbjct: 374 RVGLKPDDETYTMIMNEFCKKGDVKKASELLREMQRNGRVPCVVT 418
>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g31840-like [Vitis vinifera]
Length = 1131
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 173/396 (43%), Gaps = 61/396 (15%)
Query: 60 FQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLA 119
F + K +H + + M+D++ S ID+ E +EM + V + F +
Sbjct: 163 FAWMSKMGVSISHYAAS--EMLDLLIDSDRIDVILENYEEMCKGLGVYEFVFN----SFL 216
Query: 120 EVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQ-RKLVVEAKYLILKLSEWIKPNEI 178
+ E++K +NF + + G + NK++K LC ++ V + + + + PN +
Sbjct: 217 KRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLV 276
Query: 179 AYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
+ LI YC L EA ++NLM ++G P + + +I F+ K +E +F M
Sbjct: 277 TFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMA 336
Query: 239 RVK-----------------RMDDLG-----------------LSTYRIVIDWMCKRGKI 264
+ R+ DLG + TY I+I+ +C+ G++
Sbjct: 337 LARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRV 396
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV----VEEIEKPDISLYHGL 320
+A + ++ K+G+E LT SS+I G LR+ + + + + PD+ + L
Sbjct: 397 LEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSML 456
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG-KRGRKG------------ 367
I GL R EA + F + +KRG + + L+ G KR R G
Sbjct: 457 INGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKV 516
Query: 368 -PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
PD +V + T+ V GL + G+ +A +++ +G
Sbjct: 517 IPD-VVTY-TVLVKGLAEQGRLDEALALFFQLLKKG 550
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 146/317 (46%), Gaps = 21/317 (6%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKT-FKIALMT 117
FF ++ P + N +TF+ ++++ K +D + M + +V D + I +
Sbjct: 262 FFDMMVRSGP--SPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILING 319
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPN 176
L +L++ + F + G + + + + ++ + + +A + + L E I PN
Sbjct: 320 LFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPN 379
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
+ Y LI G C G ++EA ++ + +G EPS+ +I+ F K + ++
Sbjct: 380 VVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYG 439
Query: 237 -MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
M+R + D+ + + ++I+ + ++G + +A + KRG+ +N +++I G
Sbjct: 440 IMLRKGHVPDVVVCS--MLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFR 497
Query: 296 RGRLREA---------YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
R R+ YKV+ PD+ Y L+KGL R EA +F +++K+G
Sbjct: 498 LKRTRDGLKMYILMGMYKVI-----PDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFS 552
Query: 347 PTMHTYIMLLQGHLGKR 363
P Y L+ G KR
Sbjct: 553 PDHIIYCTLIDGFCKKR 569
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 101/201 (50%), Gaps = 6/201 (2%)
Query: 164 YLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFF 223
Y+++ + + I P+ + Y L+KG + G L EA ++ + +GF P + +I+ F
Sbjct: 508 YILMGMYKVI-PDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFC 566
Query: 224 KINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADN 283
K +++F++M+ + + Y ++I+ + G + +L E+ K G+E D
Sbjct: 567 KKRDPATGLQIFKLMQSNGIFP-DICIYNVLINMFFREGCVENVLELLREIIKYGLEPDI 625
Query: 284 LTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFRE 339
+T +++I G + +A K+ E ++ +P+ + LI + R +A +F
Sbjct: 626 VTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSS 685
Query: 340 MIKRGCEPTMHTYIMLLQGHL 360
M++RG EP + TY L+ G+
Sbjct: 686 MLERGPEPNILTYSCLIDGYF 706
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 114/252 (45%), Gaps = 16/252 (6%)
Query: 58 LFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT 117
LFFQ +K F+ + I + ++D K R+ + + M + D L+
Sbjct: 542 LFFQLLKKG---FSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLIN 598
Query: 118 LAEVRE--LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIK- 174
+ RE ++ ++ + G E + N ++ C K+ +A +KL E +K
Sbjct: 599 MF-FREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKA----IKLFEVLKC 653
Query: 175 ----PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDE 230
PN I + LI YC G + +A I++ M + G EP+I +I+ +FK +
Sbjct: 654 GRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTES 713
Query: 231 AMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
A ++++ M R+ + +Y I+ID +CK+G + +A + R + D + +I
Sbjct: 714 AFELYEKMLGDRVSP-NIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILI 772
Query: 291 YGLLARGRLREA 302
G GRL EA
Sbjct: 773 RGYCKVGRLAEA 784
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 47/242 (19%), Positives = 93/242 (38%), Gaps = 33/242 (13%)
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
Y +L+ YC G + A + M+ G S +M++ ++ D ++ ++ M
Sbjct: 143 YSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYEEMC 202
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
GL Y V + KRG++ + + +RG+ + + I+ GL ++
Sbjct: 203 K------GLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQI 256
Query: 300 REAYK----VVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
A +V P++ + LI + R EA ++ MI++G P + Y
Sbjct: 257 GVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIY--- 313
Query: 356 LQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
+I + GL +AGK + + RGV++ ++ +
Sbjct: 314 --------------------SILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMD 353
Query: 416 YY 417
Y
Sbjct: 354 AY 355
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 11/162 (6%)
Query: 65 KAQPCFAHNSITFNRMVDIIGKSRNID---LFWETLQEMGRRRLVNDKTFKIALMTLAEV 121
+ QP N+ITF ++D K +D L + ++ E G N T+ + +
Sbjct: 655 RTQP----NAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEP--NILTYSCLIDGYFKT 708
Query: 122 RELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAY 180
+ + M ++ + ++ LC++ L+ EA + + P+ IAY
Sbjct: 709 ENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAY 768
Query: 181 GWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETF 222
G LI+GYC VG L EA +++ M G P D++ K + +
Sbjct: 769 GILIRGYCKVGRLAEAMMLYDHMLVNGIMPD-DLLQKALAEY 809
>gi|15218855|ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g03560, mitochondrial; Flags: Precursor
gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18 [Arabidopsis thaliana]
gi|332189465|gb|AEE27586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 170/389 (43%), Gaps = 41/389 (10%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+T+N M+ K+ E L++M R DK T+ + + V +
Sbjct: 258 VTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQE 317
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK--LSEWIKPNEIAYGWLIKGYCDVG 191
M++ G + + V+ LC+ + E Y + + + + KPN Y LI GY G
Sbjct: 318 MDEKGIQVPPHAFSLVIGGLCKEGKLNEG-YTVFENMIRKGSKPNVAIYTVLIDGYAKSG 376
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST- 250
+ +A ++ + M DEGF+P + ++ K + +EA+ F R D L +++
Sbjct: 377 SVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTC---RFDGLAINSM 433
Query: 251 -YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA---YKVV 306
Y +ID + K G++ +A + EEM ++G D+ +++I ++ EA +K +
Sbjct: 434 FYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRM 493
Query: 307 EEIEKPDISLYHG--LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL--GK 362
EE E D ++Y L+ G+ + R EA +++ MI +G PT + L G GK
Sbjct: 494 EEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGK 553
Query: 363 RGR--KGPDPLVNFDTIF-------VGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
R K D L I + L KAG+ +A K + + RG EVP
Sbjct: 554 VARACKILDELAPMGVILDAACEDMINTLCKAGRIKEACKLADGITERGREVP------- 606
Query: 414 LHYYSNEEGVVMFEEVGKKLREVGLADLA 442
VM LR+VG ADLA
Sbjct: 607 -----GRIRTVMI----NALRKVGKADLA 626
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 147/320 (45%), Gaps = 17/320 (5%)
Query: 56 VYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIAL 115
+ FF +++K Q + HN + +VD++ ++++D E+ + + AL
Sbjct: 135 AWSFFCWSRK-QKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANAL 193
Query: 116 M-TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWI 173
+ + ++ +++++ + M + G E +L N ++ L V A+ + + S I
Sbjct: 194 IKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRI 253
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
KP+ + Y +IKGYC G +A + M G E MI+ + + +
Sbjct: 254 KPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVA 313
Query: 234 VFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSI 289
++Q MD+ G+ + +VI +CK GK+++ YT+ E M ++G + + + +
Sbjct: 314 LYQ-----EMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVL 368
Query: 290 IYGLLARGRLREA----YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGC 345
I G G + +A +++++E KPD+ Y ++ GL + R EA F G
Sbjct: 369 IDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGL 428
Query: 346 EPTMHTYIMLLQGHLGKRGR 365
Y L+ G LGK GR
Sbjct: 429 AINSMFYSSLIDG-LGKAGR 447
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 84/208 (40%), Gaps = 51/208 (24%)
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
+ +S +I K G + + + +M + GIE T + ++ GL++ + A +V
Sbjct: 185 MTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERV 244
Query: 306 VEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ---- 357
E +E KPDI Y+ +IKG + + ++A + R+M RG E TY+ ++Q
Sbjct: 245 FEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYA 304
Query: 358 ------------------------------GHLGKRG-------------RKGPDPLVNF 374
G L K G RKG P V
Sbjct: 305 DSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAI 364
Query: 375 DTIFVGGLVKAGKSLDAAKYVERVMNRG 402
T+ + G K+G DA + + R+++ G
Sbjct: 365 YTVLIDGYAKSGSVEDAIRLLHRMIDEG 392
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 47/240 (19%), Positives = 100/240 (41%), Gaps = 5/240 (2%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMV 128
F + +T++ +V+ + K+ ++ + L + F +L+ L + + +
Sbjct: 393 FKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAE 452
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGW--LIKG 186
F M++ GC N ++ + + V EA L ++ E ++ Y + L+ G
Sbjct: 453 RLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSG 512
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
EA K+W++M D+G P+ + K A K+ + M +
Sbjct: 513 MFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILD--ELAPMGVI 570
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
+ +I+ +CK G+I +A + + + +RG E + +I L G+ A K++
Sbjct: 571 LDAACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMKLM 630
>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 142/291 (48%), Gaps = 7/291 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVR-ELKKMVNFF 131
N + F+ +VD + K I + + + M +R + D ALM +R E+ + V F
Sbjct: 359 NVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVF 418
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDV 190
M GC ++ N ++ CQ + + +A L+ ++S + + + + Y LI G C V
Sbjct: 419 DTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHV 478
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G L A +++ M G P + +++ K + EAM + + + +D +
Sbjct: 479 GRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDA-DILV 537
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y I ID MC+ G++ A + + +G++ D T + +I+GL RG L EA K+ +++
Sbjct: 538 YNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMD 597
Query: 311 KPDIS----LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
+ S +Y+ +I+G LR ATQ+ +EM+ G + T ++++
Sbjct: 598 ENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVE 648
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 132/293 (45%), Gaps = 7/293 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
+++ F +++ I K ++ +M + D T I + + +R L +
Sbjct: 149 STVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVL 208
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDV 190
+ GC+ N +++ LC + EA +L K + E +P+ + YG L+ G C V
Sbjct: 209 AKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKV 268
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G+ A ++ M + P++ + +I++ K + EA +F M K + + T
Sbjct: 269 GNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISP-DIFT 327
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y +I +C + T+L EM I + + S+++ L G + A+ VV+ +
Sbjct: 328 YNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMI 387
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
K PD+ Y L+ G EA +VF M+ +GC P + +Y +L+ G+
Sbjct: 388 KRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGY 440
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 150/328 (45%), Gaps = 40/328 (12%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N I +N ++D + K R + + EM + + D T+ + L + E K +
Sbjct: 289 NVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLL 348
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDV 190
+ M + ++ + + VV LC+ ++ A ++ + + ++P+ + Y L+ G+C
Sbjct: 349 NEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLR 408
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM--DDL-- 246
++ EA K+++ M +G P++ + +I + +I + D+AM + + M ++ + D +
Sbjct: 409 SEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTY 468
Query: 247 ------------------------------GLSTYRIVIDWMCKRGKISQAYTMLEEMFK 276
L TYRI++D++CK +++A +L+ +
Sbjct: 469 NTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEG 528
Query: 277 RGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRARE 332
++AD L + I G+ G L A + + +PD+ Y+ +I GL + E
Sbjct: 529 SNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDE 588
Query: 333 ATQVFREMIKRGCEPTMHTYIMLLQGHL 360
A ++FR+M + GC Y +++G L
Sbjct: 589 ANKLFRKMDENGCSRDGCIYNTIIRGFL 616
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 84/186 (45%), Gaps = 31/186 (16%)
Query: 242 RMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
+MD G+ T I+I+ C ++ A+++L ++ K G + DN T +++I GL G
Sbjct: 175 QMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEG 234
Query: 298 RLREAY----KVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYI 353
++ EA K + E +PD+ Y L+ GL ++ A ++ R M+++ C P
Sbjct: 235 KIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPN----- 289
Query: 354 MLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
++ ++TI + L K + +A ++ +G+ F YN
Sbjct: 290 -----------------VIAYNTI-IDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSL 331
Query: 414 LHYYSN 419
+H N
Sbjct: 332 IHALCN 337
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 158/352 (44%), Gaps = 27/352 (7%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALMTLAEVRELKKMVNFFHI 133
+TF +++ +GK E +M R +D T+ + L ++ E F
Sbjct: 46 VTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKK 105
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGD 192
M + GC+ ++ + ++ +LC+ + V EA + + ++ I P Y LI+G C+
Sbjct: 106 MEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSR 165
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS--- 249
EAS + N MT P++ + +++TF K K A V +K M ++G+
Sbjct: 166 WKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGV-----LKTMTEMGVEPDV 220
Query: 250 -TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY ++ ++ +A + + M +G + D + S +I G R+ EA ++ E
Sbjct: 221 VTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNE 280
Query: 309 I----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL-----QGH 359
+ P+ Y+ LI GL +L R REA +F+ M G P ++TY +LL QG+
Sbjct: 281 MIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGY 340
Query: 360 LGKRGR-------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVE 404
LGK R P + I V + K+G DA + + G++
Sbjct: 341 LGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQ 392
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 132/281 (46%), Gaps = 13/281 (4%)
Query: 73 NSITFNRMVDII---GKSRNIDLFWETLQEMG-RRRLVNDKTFKIALMTLAEVRELKKMV 128
N +TFN +VD GK + +T+ EMG +V + EV E +K+
Sbjct: 184 NVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKL- 242
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGY 187
F +M GC+ + + ++ C+ K + EAK L ++ + PN ++Y LI G
Sbjct: 243 --FDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGL 300
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C +G L EA ++ M G P++ +++ F K +A ++F+ M+ +
Sbjct: 301 CQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKP-N 359
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
L Y I+++ MCK G + A + E+F G++ + ++II GL G L EA +
Sbjct: 360 LVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFR 419
Query: 308 EIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+E PD Y+ +I+G L+ + A + EM RG
Sbjct: 420 NMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRG 460
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 129/270 (47%), Gaps = 7/270 (2%)
Query: 97 LQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQ 155
L EM ++ N TF + + T + ++ M + G E + N ++
Sbjct: 173 LNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSM 232
Query: 156 RKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDV 214
VVEA+ L + +++ KP+ +Y LI GYC + EA +++N M +G P+
Sbjct: 233 WTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVS 292
Query: 215 VDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEM 274
+ +I ++ + EA +F+ M + L TY I++D CK+G + +A+ + M
Sbjct: 293 YNTLIHGLCQLGRLREAQDLFKNMHTNG-NLPNLYTYAILLDGFCKQGYLGKAFRLFRAM 351
Query: 275 FKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRA 330
++ + + + ++ + G L++A ++ E+ +P++ +Y +I GL +
Sbjct: 352 QSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLL 411
Query: 331 REATQVFREMIKRGCEPTMHTYIMLLQGHL 360
EA + FR M GC P +Y ++++G L
Sbjct: 412 DEALEAFRNMEDDGCPPDEFSYNVIIRGFL 441
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 101/232 (43%), Gaps = 25/232 (10%)
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRG 262
G P+ ++ +I F ++ + D V + + LGL T+ +I+ + K G
Sbjct: 5 GLSPNTCTLNILINCFCQLQRVDLGFSV-----LAKGIKLGLQPTIVTFTTLINGLGKVG 59
Query: 263 KISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISL----YH 318
K +QA + ++M RG + D+ T ++II GL G A + +++E+ L Y
Sbjct: 60 KFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYS 119
Query: 319 GLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDT-- 376
LI L + RR EA +F M + PT+ TY L+QG K L+N T
Sbjct: 120 TLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSL 179
Query: 377 ----------IFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYS 418
+ V K GK L A ++ + GVE YN ++ YS
Sbjct: 180 NIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYS 231
>gi|225442663|ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Vitis vinifera]
Length = 725
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 152/308 (49%), Gaps = 10/308 (3%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRR-LVNDKTFKIALMT 117
FF++ K + F H+S T+ ++ + ++ + W+T+QEM R ++ +
Sbjct: 110 FFKWAGKRRN-FEHDSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKV 168
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW--IKP 175
L + + + K ++ F+ + C+ + N ++ L Q + L ++ P
Sbjct: 169 LGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLP 228
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
+ + Y LI + +G A +++ M + G P+ + ++ +FK+ + ++A+ +
Sbjct: 229 DTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLV 288
Query: 236 QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
Q M+ K L + TY +I + K GK+ +AY++ M K G + D + ++++I L
Sbjct: 289 QEMKEKGCA-LTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGK 347
Query: 296 RGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLR-RAREATQVFREMIKRGCEPTMH 350
GRL +A K+ EE+E P++ Y+ +IK L + RA EA + +M + G P+
Sbjct: 348 AGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSF 407
Query: 351 TYIMLLQG 358
TY +L+ G
Sbjct: 408 TYSILIDG 415
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 92/398 (23%), Positives = 174/398 (43%), Gaps = 59/398 (14%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
+++T++ ++ GK D EM L K + L ++ ++K +
Sbjct: 229 DTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLV 288
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDV 190
M + GC ++ +++K + + V EA + + L E KP+ + LI
Sbjct: 289 QEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKA 348
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKIN-KDDEAMKVFQMMRVKRMDDLGLS 249
G L +A K++ M P++ + +I+ F+ + EA ++ M+ +
Sbjct: 349 GRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSF- 407
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGI--------------------EADNLTL--- 286
TY I+ID CK ++ +A +LEEM ++G EA N
Sbjct: 408 TYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQEL 467
Query: 287 -------SSIIYGLLAR-----GRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRA 330
S+ +Y ++ + GRL EA + E++K PD+ Y+ L+ G++R+
Sbjct: 468 RENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMT 527
Query: 331 REATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKG--------------PDPLVNFDT 376
EA + R M + GC P ++++ ++L G G KG PD +V+++T
Sbjct: 528 DEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPD-VVSYNT 586
Query: 377 IFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
+ +G L +AG +AAK ++ + ++G E Y+ L
Sbjct: 587 V-LGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSIL 623
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/328 (21%), Positives = 132/328 (40%), Gaps = 49/328 (14%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTL-AEVRELKKMVNFFHIM 134
T+ ++ +GK+ ++ + M + D L+ L + L + F M
Sbjct: 302 TYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEM 361
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLIL-KLSE-WIKPNEIAYGWLIKGYCDVGD 192
C ++ N V+K L + K +L K+ E + P+ Y LI G+C
Sbjct: 362 ESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNR 421
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST-- 250
+ +A + M ++GF P +I K + + A ++FQ +R ++ G S+
Sbjct: 422 VEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELR----ENCGYSSAR 477
Query: 251 -YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
Y ++I + K G++S+A + EM K G D ++++ G++ G EA+ ++ +
Sbjct: 478 VYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTM 537
Query: 310 E---------------------------------------KPDISLYHGLIKGLLRLRRA 330
E KPD+ Y+ ++ L R
Sbjct: 538 EENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMF 597
Query: 331 REATQVFREMIKRGCEPTMHTYIMLLQG 358
EA ++ +EM +G E + TY +L+
Sbjct: 598 EEAAKLMKEMNSKGFEYDLITYSSILEA 625
>gi|224136626|ref|XP_002322376.1| predicted protein [Populus trichocarpa]
gi|222869372|gb|EEF06503.1| predicted protein [Populus trichocarpa]
Length = 715
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 142/309 (45%), Gaps = 27/309 (8%)
Query: 149 VVKTLCQRKLVVEAKYLILKL--SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDE 206
++ LC++ +A L LKL S+ KPN Y +I GYC L A + + M ++
Sbjct: 342 LIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQ 401
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQ 266
G P+ +I+ K ++A ++ +M K + TY ID +CK+G+ +
Sbjct: 402 GLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMG-KEGFSANIFTYNAFIDSLCKKGRFLE 460
Query: 267 AYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY----KVVEEIEKPDISLYHGLIK 322
A +L++ F+ G++AD +T + +I L R REA K+ + +PD+ Y+ LI
Sbjct: 461 ACKLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIA 520
Query: 323 GLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK--------------GP 368
R RR E+ ++F E + G PT TY ++ G+ R P
Sbjct: 521 AFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTP 580
Query: 369 DPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV---EVPRFDYN-KFLHYYSNEEGVV 424
D L + GL K K +A + E ++++G+ EV R ++ + +V
Sbjct: 581 DSLTY--GALISGLCKESKLDEACQLYEAMVDKGLSPCEVTRLTLAYEYCKQDDSATAMV 638
Query: 425 MFEEVGKKL 433
+ E + KKL
Sbjct: 639 ILERLDKKL 647
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 139/316 (43%), Gaps = 27/316 (8%)
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPN 176
AE+ + ++ VN M + G ++ LN V + LV A+ + ++ + P+
Sbjct: 171 FAEIGKFQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDEMRVRGVCPD 230
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
++Y + YC +G + + + M GF MI TF + A +VF
Sbjct: 231 SVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCE---KGFASRVFW 287
Query: 237 MMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
+ +LGL + +I+ +CKRG I QA+ MLEEM K+G + + T +++I G
Sbjct: 288 YF--DKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDG 345
Query: 293 LLARGRLREAYK-----VVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
L +G +A++ V + KP++ Y +I G + + A + M ++G P
Sbjct: 346 LCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVP 405
Query: 348 TMHTYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYV 395
TY L+ GH + G++G + F+ L K G+ L+A K +
Sbjct: 406 NTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLL 465
Query: 396 ERVMNRGVEVPRFDYN 411
++ G++ Y
Sbjct: 466 KKGFRLGLQADTVTYT 481
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 133/297 (44%), Gaps = 16/297 (5%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVNFF 131
N I F +++ + K +I +E L+EM ++ + AL+ L + +K F
Sbjct: 300 NLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKAFRLF 359
Query: 132 -HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCD 189
++ + ++ ++ C+ + A+ L+ ++ E + PN Y LI G+
Sbjct: 360 LKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSK 419
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
G+ +A ++ +LM EGF +I + I++ K + EA K+ +K+ LGL
Sbjct: 420 AGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKL-----LKKGFRLGLQ 474
Query: 250 ----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
TY I+I +C+R +A +MFK G++ D T +++I + R+ E+ K+
Sbjct: 475 ADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESEKL 534
Query: 306 VEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
E P Y +I G R R A + F M GC P TY L+ G
Sbjct: 535 FAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGALISG 591
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 119/301 (39%), Gaps = 88/301 (29%)
Query: 201 NLMTDEGFEPSIDVVDKMIETFFKINKDDEAM---------------------------- 232
+ + +E FE + +V+D M+ F +I K EA+
Sbjct: 150 SFIGNENFERAHEVMDCMVRVFAEIGKFQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEM 209
Query: 233 -------KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
VF MRV+ + +S Y+++ C+ G+IS L++M +RG DN T
Sbjct: 210 GLVGYAENVFDEMRVRGVCPDSVS-YKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNAT 268
Query: 286 -----------------------------------LSSIIYGLLARGRLREAYKVVEEIE 310
+S+I GL RG +++A++++EE+
Sbjct: 269 CTLMISTFCEKGFASRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMV 328
Query: 311 ----KPDISLYHGLIKGLLRLRRAREATQVFREMIKR-GCEPTMHTYIMLLQGH------ 359
KP++ + LI GL + +A ++F ++++ +P +HTY ++ G+
Sbjct: 329 KKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKL 388
Query: 360 ------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
L + +G P T + G KAG A + ++ + G F YN F
Sbjct: 389 NRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAF 448
Query: 414 L 414
+
Sbjct: 449 I 449
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 135/302 (44%), Gaps = 16/302 (5%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
N +T+N +++ K E EM R ++ N T+ + + L + F
Sbjct: 322 NVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMF 381
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
++M GC + ++ C K + + L+ ++ + N + Y LI G+C V
Sbjct: 382 YLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLV 441
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD------ 244
GDL A + M G P I + +++ K +A+++F+ M+ +MD
Sbjct: 442 GDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHP 501
Query: 245 ----DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
+ + TY I+I + GK +A + EEM RGI D +T SS+I GL + RL
Sbjct: 502 FNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLD 561
Query: 301 EAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
EA ++ + P++ ++ LI G + R + ++F EM +RG YI L+
Sbjct: 562 EATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLI 621
Query: 357 QG 358
G
Sbjct: 622 YG 623
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 154/360 (42%), Gaps = 20/360 (5%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHI 133
I FN+++ + + DL Q+M R+++ D +F I + +L ++ F
Sbjct: 82 IDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGK 141
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDL 193
+ G + ++ LC V EA L ++ +P+ + + L+ G C G +
Sbjct: 142 LTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQIC---RPDVLTFTTLMNGLCREGRV 198
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
+EA + + M + G +P ++ K+ A+ + + M + Y
Sbjct: 199 VEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSA 258
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK-- 311
+ID +CK G+ S ++ + EM +GI + +T + +I G GR A ++++E+ +
Sbjct: 259 IIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERK 318
Query: 312 --PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR------ 363
P++ Y+ LI ++ + EA +++ EM+ RG P TY ++ G +
Sbjct: 319 ISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAE 378
Query: 364 ------GRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
KG P V T + G A + D + + + RG+ YN +H +
Sbjct: 379 DMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGF 438
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 112/261 (42%), Gaps = 15/261 (5%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAE 120
Y + C + + TF ++D ++ ID E L EM RR LV N T+ +
Sbjct: 382 YLMATKGC-SPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCL 440
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE--------- 171
V +L ++ M G + N ++ LC + +A + + +
Sbjct: 441 VGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASH 500
Query: 172 ---WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++P+ + Y LI G + G +EA +++ M G P MI+ K ++
Sbjct: 501 PFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 560
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
DEA ++F M K + T+ +I+ CK G++ + EM +RGI AD + +
Sbjct: 561 DEATQMFVSMGSKSFSP-NVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYIT 619
Query: 289 IIYGLLARGRLREAYKVVEEI 309
+IYG G + A + +E+
Sbjct: 620 LIYGFRKVGNINGALDIFQEM 640
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 111/253 (43%), Gaps = 33/253 (13%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
I+ + ++ LIK +C L A + +T G P + ++ ++ EA+
Sbjct: 112 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEAL 171
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
+F ++ R D L T+ +++ +C+ G++ +A +L+ M + G++ D +T + + G
Sbjct: 172 DLFH--QICRPDVL---TFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDG 226
Query: 293 LLARGRLREAYKVVEEIE-----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
+ G A ++ ++E KP++ +Y +I GL + R ++ +F EM +G P
Sbjct: 227 MCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFP 286
Query: 348 TMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPR 407
+ TY +GG +G+ A + ++ ++ R +
Sbjct: 287 NIVTY-----------------------NCMIGGFCISGRWSAAQRLLQEMLERKISPNV 323
Query: 408 FDYNKFLHYYSNE 420
YN ++ + E
Sbjct: 324 VTYNALINAFVKE 336
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 100/216 (46%), Gaps = 16/216 (7%)
Query: 210 PSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYT 269
PS+ +K++ ++ + D + ++Q M K++ + ++ I+I C K+ A +
Sbjct: 79 PSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIR-CDIYSFTILIKCFCSCSKLPFALS 137
Query: 270 MLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRR 329
++ K G+ D +T +++++GL R+ EA + +I +PD+ + L+ GL R R
Sbjct: 138 TFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRPDVLTFTTLMNGLCREGR 197
Query: 330 AREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG---------RKGPD-----PLVNFD 375
EA + M++ G +P TY + G + K G RK + P V
Sbjct: 198 VVEAVALLDRMVENGLQPDQITYGTFVDG-MCKMGDTVSALNLLRKMEEISHIKPNVVIY 256
Query: 376 TIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
+ + GL K G+ D+ + ++G+ YN
Sbjct: 257 SAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYN 292
>gi|147821100|emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]
Length = 844
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 155/342 (45%), Gaps = 13/342 (3%)
Query: 24 SRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDI 83
S+LH S C NL F+ + N+ + RP + + + +FN +++
Sbjct: 159 SQLHKSQIKCGENL----FITVIRNYGFAGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNT 214
Query: 84 IGKSRNIDLFWETLQEMGRRRLV--NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEY 141
+ +++ DL + ++ + N T I + L + ++ + M G
Sbjct: 215 LVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIP 274
Query: 142 SLEMLNKVVKTLCQRKLVVEAKYLILKLSE--WIKPNEIAYGWLIKGYCDVGDLIEASKI 199
++ ++ + +V A+ + ++ + W+ P+ Y L+ GYC G ++A K+
Sbjct: 275 NVVTYTTILGGYVSKGDMVGARRVFGEILDRGWV-PDPTTYTILMDGYCKKGRFMDAVKV 333
Query: 200 WNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMC 259
+ M + EP+ +IE + K K E + + M K+ R VID +C
Sbjct: 334 MDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCR-VIDMLC 392
Query: 260 KRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK---PDISL 316
+ GK+ A + +++ K+ DN S++I+ L G++ EA K+ +E EK P
Sbjct: 393 EEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDEFEKGSIPSTLT 452
Query: 317 YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
Y+ LI G+ EA +++ M+++GC P TY ML++G
Sbjct: 453 YNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKG 494
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 134/340 (39%), Gaps = 79/340 (23%)
Query: 56 VYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIA 114
V+L F+ +K + N T N +V + K +ID L+EM + N T+
Sbjct: 224 VHLMFKNCRK-KFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTI 282
Query: 115 LMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WI 173
L ++ F + D G ++ C++ ++A ++ ++ E +
Sbjct: 283 LGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRV 342
Query: 174 KPNEIAYGWLIKGYCD----------VGDLIE-------------------------ASK 198
+PN++ YG +I+ YC + D++E A +
Sbjct: 343 EPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACE 402
Query: 199 IWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWM 258
+W + + P D+ ST +I W+
Sbjct: 403 LWKKLLKKNCTP---------------------------------DNAITST---LIHWL 426
Query: 259 CKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV----VEEIEKPDI 314
CK GK+ +A + +E F++G LT +++I G+ G L EA ++ VE+ P+
Sbjct: 427 CKEGKVWEARKLFDE-FEKGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNA 485
Query: 315 SLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIM 354
Y+ LIKG ++ ARE +V EM+ GC P TY +
Sbjct: 486 FTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPNKATYAI 525
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 50/124 (40%), Gaps = 16/124 (12%)
Query: 312 PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKG---- 367
P++ + L+K L + A +V EM G P + TY +L G++ K G
Sbjct: 239 PNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRV 298
Query: 368 ----------PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
PDP TI + G K G+ +DA K ++ + VE Y + Y
Sbjct: 299 FGEILDRGWVPDPTTY--TILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAY 356
Query: 418 SNEE 421
E+
Sbjct: 357 CKEK 360
>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 156/330 (47%), Gaps = 20/330 (6%)
Query: 126 KMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLI 184
K + F M + G ++ + + ++ LC+ + EA L ++ S+ IK N I Y LI
Sbjct: 97 KGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLI 156
Query: 185 KGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD 244
C G EA++ ++ M EG P + +I+ K K EA K+F++M +K+ +
Sbjct: 157 HASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELM-IKQGE 215
Query: 245 DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK 304
+ TY +++ +C ++ A + E M +RGI+ D ++ +++I G G+ EA
Sbjct: 216 APNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMT 275
Query: 305 VVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL 360
+ +++ P I+ Y L+K L + R R A ++F M G P++ TY +LL G L
Sbjct: 276 LFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDG-L 334
Query: 361 GKRG--RKGPD-----------PLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPR 407
K G + D P + +I +GG+ +A + A + + + G+
Sbjct: 335 CKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNI 394
Query: 408 FDYNKFLHYYSNEEGVVMFEEVGKKLREVG 437
YN ++ E ++ E + ++ E G
Sbjct: 395 VTYNIMINGLCKEGKLLEAERLFVQMEESG 424
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 136/278 (48%), Gaps = 25/278 (8%)
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
+PN + L+KG C G +++A ++++ MT GF+ I + +I K + A++
Sbjct: 6 QPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVE 65
Query: 234 VFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
+ + M + + TY +VID +CK G + M EM GI + + SS+I GL
Sbjct: 66 LHRRM-LSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGL 124
Query: 294 LARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
G+LREA + +E+ K ++ Y+ LI R +EAT+ F +M+ G P +
Sbjct: 125 CRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDV 184
Query: 350 HTYIMLLQGHLGKRG-------------RKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYV 395
T+ L+ HL K+G ++G P +V ++++ + GL + A +
Sbjct: 185 VTFTTLID-HLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSL-LNGLCLHHQMDHAVRLF 242
Query: 396 ERVMNRGVEVPRFDYNKFLHYYS----NEEGVVMFEEV 429
E ++ RG+++ YN ++ Y EE + +F ++
Sbjct: 243 EVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKM 280
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 97/195 (49%), Gaps = 5/195 (2%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
LSE N YG +I C G I+ K++ M + G P++ V +I ++ K
Sbjct: 71 LSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKL 130
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
EA+ +F M V + + TY +I C+ G +A +M GI D +T ++
Sbjct: 131 REAVNLFDEM-VSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTT 189
Query: 289 IIYGLLARGRLREAYKVVE----EIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+I L +G+++EAYK+ E + E P+I Y+ L+ GL + A ++F M++RG
Sbjct: 190 LIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERG 249
Query: 345 CEPTMHTYIMLLQGH 359
+ + +Y L+ G+
Sbjct: 250 IKIDVISYNTLINGY 264
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 134/297 (45%), Gaps = 13/297 (4%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETL----QEMGRRRLVNDKTFKIALMTLAEVRELKKMV 128
N IT+N +I S L+ E Q +G L + TF + L++ ++++
Sbjct: 148 NVITYN---SLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAY 204
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGY 187
F +M G ++ N ++ LC + A L + E IK + I+Y LI GY
Sbjct: 205 KIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGY 264
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C G EA ++ M E PSI +++ ++ + A ++F M++
Sbjct: 265 CTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSP-S 323
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
L TY +++D +CK G I +A + + + S +I G+ R A ++ +
Sbjct: 324 LDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFD 383
Query: 308 EIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL 360
EI P+I Y+ +I GL + + EA ++F +M + GCE ++ +++G L
Sbjct: 384 EIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFL 440
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 131/288 (45%), Gaps = 7/288 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRR-RLVNDKTFKIALMTLAEVRELKKMVNFFHI 133
+TF ++D + K + ++ + M ++ N T+ L L ++ V F +
Sbjct: 185 VTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEV 244
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGD 192
M + G + + N ++ C EA L K+ E + P+ Y L+K G
Sbjct: 245 MVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGR 304
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ A +++N M G PS+D +++ K +EA+ VF+ ++ + + Y
Sbjct: 305 IRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKP-SIRIYS 363
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP 312
I+I M + + A + +E+ G+ + +T + +I GL G+L EA ++ ++E+
Sbjct: 364 ILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEES 423
Query: 313 ----DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
D ++ +I+G L+ + ++A + + M ++ P +ML+
Sbjct: 424 GCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPNDSVTLMLV 471
>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 181/377 (48%), Gaps = 26/377 (6%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDL---FWETLQEMGRRRLVNDKTFKIALMTL 118
Y + A+ + + + +N M++ ++ I+ W+ +++ G R +V ++ I + L
Sbjct: 288 YKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVV---SYNILIRGL 344
Query: 119 AEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPN-- 176
E ++ + ++ + ++ + C +V LC+ + +A IL+ +E + +
Sbjct: 345 FENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKA-LSILEEAENGRGDLD 403
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
AY +I G C G L E + + + MT G +P+ V + +I F + +K ++A++ F
Sbjct: 404 TFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFG 463
Query: 237 MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR 296
M V + + TY +I+ + K + S+AY +++EM ++G + + +T S ++ GL
Sbjct: 464 NM-VSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQG 522
Query: 297 GRLREAY----KVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
+L A + +E+ KPD+ +++ +I GL + +A Q++ EM +R C P + T+
Sbjct: 523 KKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTH 582
Query: 353 IMLLQGHLGKRG------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMN 400
L++G R + G P + I + GL + DA ++ ++
Sbjct: 583 NTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVD 642
Query: 401 RGVEVPRFDYNKFLHYY 417
RGV +N + Y
Sbjct: 643 RGVLPTAITWNILVQGY 659
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 129/255 (50%), Gaps = 6/255 (2%)
Query: 109 KTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK 168
+++ L L E + + +FF G +L+ N ++K C++K +AK L+
Sbjct: 90 RSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNW 149
Query: 169 L-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINK 227
+ + P+ +YG LI G + +A K+++ M + G P + + +I+ FFK
Sbjct: 150 MWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGD 209
Query: 228 DDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLS 287
A ++++ + + +Y ++I+ +CK GK +++ + M K D T S
Sbjct: 210 ILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYS 269
Query: 288 SIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
++I+GL G L A +V +E+ + PD+ +Y+ ++ G LR R E ++++ M K
Sbjct: 270 TLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKE 329
Query: 344 GCEPTMHTYIMLLQG 358
GC T+ +Y +L++G
Sbjct: 330 GCR-TVVSYNILIRG 343
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 151/328 (46%), Gaps = 27/328 (8%)
Query: 85 GKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLE 144
G N WE L + G N ++ + + L + + + +H M L
Sbjct: 208 GDILNASEIWERLLK-GPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLY 266
Query: 145 MLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLM 203
+ ++ LC + A + +++E + P+ + Y ++ GY G + E ++W +M
Sbjct: 267 TYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVM 326
Query: 204 TDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR--MDDLGLSTYRIVIDWMCKR 261
EG + + +I F+ K DEA+ +++++ K D + TY +++ +CK
Sbjct: 327 EKEGCRTVVSY-NILIRGLFENAKVDEAISIWELLPEKDCCADSM---TYGVLVHGLCKN 382
Query: 262 GKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLY 317
G +++A ++LEE + D SS+I GL GRL E V++++ KP+ +
Sbjct: 383 GYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVC 442
Query: 318 HGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR------------ 365
+ +I G +R + +A + F M+ +GC PT+ TY L+ G L K R
Sbjct: 443 NAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLING-LSKAERFSEAYALVKEML 501
Query: 366 -KGPDPLVNFDTIFVGGLVKAGKSLDAA 392
KG P + ++ + GL + GK LD A
Sbjct: 502 QKGWKPNMITYSLLMNGLCQ-GKKLDMA 528
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 101/230 (43%), Gaps = 22/230 (9%)
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQ 266
G +P I + ++ + NK DEA F + L TY I+I C++ + +
Sbjct: 84 GCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSP-NLQTYNILIKISCRKKQFDK 142
Query: 267 AYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIK 322
A +L M+ +G D + ++I L G + +A K+ +E+ + PD++ Y+ LI
Sbjct: 143 AKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILID 202
Query: 323 GLLRLRRAREATQVFREMIK-RGCEPTMHTYIMLLQG--------------HLGKRGRKG 367
G + A++++ ++K P + +Y +++ G H K+ +G
Sbjct: 203 GFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERG 262
Query: 368 PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
D L + T+ + GL +G A + + + GV YN L+ Y
Sbjct: 263 QD-LYTYSTL-IHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGY 310
>gi|410109903|gb|AFV61031.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
montevidensis]
Length = 431
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 137/288 (47%), Gaps = 41/288 (14%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T + L L +++ K + F+ + +CG SL N ++ C+ + A+ + +
Sbjct: 109 TCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAI 168
Query: 170 SEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++W ++P+ ++Y L+ GY +GDL E ++ + M G +P + +I K +K
Sbjct: 169 TKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKI 228
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
D+A ++F M VK + + T+ +ID CK G++ A + ++M + + D +T ++
Sbjct: 229 DDANELFDEMLVKGLVPNSV-TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 287
Query: 289 IIYGLLARGRLREAYKVVEEIE----KP-------------------------------- 312
+IYGL +G L++A+ +++E+ KP
Sbjct: 288 LIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQEN 347
Query: 313 ---DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
D +Y LI GL R ++ +A ++ REM+ G +P TY M++
Sbjct: 348 TRLDDVVYTALISGLCREGQSVDAEKMLREMLSVGLKPDARTYTMIIN 395
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 95/227 (41%), Gaps = 43/227 (18%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
NS+TF ++D K+ +DL E ++M + L D
Sbjct: 246 NSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPD------------------------ 281
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVG 191
L N ++ LC++ + +A +LI ++S + +KP++I Y LI G C G
Sbjct: 282 ----------LITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDG 331
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLST 250
DL A + M E V +I + + +A K+ +M+ V D T
Sbjct: 332 DLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGQSVDAEKMLREMLSVGLKPDA--RT 389
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
Y ++I+ CK+G + + +L+EM + D S + Y +L G
Sbjct: 390 YTMIINEFCKKGDVWKGSKLLKEM-----QRDGHVPSVVTYNVLMNG 431
>gi|410109877|gb|AFV61018.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
lycioides]
Length = 397
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 138/288 (47%), Gaps = 41/288 (14%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T + L L +++ K + F+ + +CG SL N ++ C+ ++ A+ + +
Sbjct: 92 TCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKEGDIMVAQSVFNAI 151
Query: 170 SEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++W ++P+ +++ L+ GY +GD+ E ++ N M G +P + +I K +K
Sbjct: 152 TKWGLRPSVVSFNTLMNGYIRLGDMDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKM 211
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
D+A ++F M K + G+ T+ +ID CK G++ A + ++M + + D +T ++
Sbjct: 212 DDANEMFDEMLDKGLVPNGV-TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLXPDLITYNT 270
Query: 289 IIYGLLARGRLREAYKVVEEIE----KPD------------------------------- 313
+IYGL +G L++A+ +++E+ KPD
Sbjct: 271 LIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQEX 330
Query: 314 ISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
I L Y LI GL + R +A +V REM+ G +P TY M++
Sbjct: 331 IRLDDVAYTALISGLCQEERYLDAEKVLREMLSVGLKPDTGTYTMIIN 378
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 135/317 (42%), Gaps = 54/317 (17%)
Query: 142 SLEMLNKVVKTLCQRKLVVEAKYLI-------------------LKLSEWIKPNEIAYGW 182
+L+ ++ LC +++ EAK LI L+ + + +
Sbjct: 1 TLDSYCTMIHLLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSG 60
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR--V 240
LI Y + G L +A + + L + F D K++E K +K F+++
Sbjct: 61 LITAYLESGFLRDAXECYRLTREHKFWVPFDTCRKVLEHLMK-------LKYFKLVWGFY 113
Query: 241 KRMDDLG----LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR 296
+ + + G L + I++ CK G I A ++ + K G+ ++ ++++ G +
Sbjct: 114 EEILECGYPASLYFFNILMHRFCKEGDIMVAQSVFNAITKWGLRPSVVSFNTLMNGYIRL 173
Query: 297 GRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
G + E +++ + +PD+ Y LI GL + + +A ++F EM+ +G P T+
Sbjct: 174 GDMDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANEMFDEMLDKGLVPNGVTF 233
Query: 353 IMLLQGHLGKRGRKG---------------PDPLVNFDTIFVGGLVKAGKSLDAAKYVER 397
L+ GH K GR PD L+ ++T+ + GL K G A ++
Sbjct: 234 TTLIDGHC-KNGRVDLAMEIYKQMLSQSLXPD-LITYNTL-IYGLCKKGDLKQAHDLIDE 290
Query: 398 VMNRGVEVPRFDYNKFL 414
+ +G++ + Y +
Sbjct: 291 MSMKGLKPDKITYTTLI 307
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 107/244 (43%), Gaps = 9/244 (3%)
Query: 102 RRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVE 161
R +V+ T + L ++ E ++ N H G + + + ++ LC+ + +
Sbjct: 157 RPSVVSFNTLMNGYIRLGDMDEGFRLKNAMHA---SGVQPDVYTYSVLINGLCKESKMDD 213
Query: 162 AKYLILK-LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIE 220
A + + L + + PN + + LI G+C G + A +I+ M + P + + +I
Sbjct: 214 ANEMFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLXPDLITYNTLIY 273
Query: 221 TFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIE 280
K +A + M +K + + TY +ID CK G + A+ + M + I
Sbjct: 274 GLCKKGDLKQAHDLIDEMSMKGLKPDKI-TYTTLIDGCCKEGDLETAFEHRKRMIQEXIR 332
Query: 281 ADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQV 336
D++ +++I GL R +A KV+ E+ KPD Y +I + +++
Sbjct: 333 LDDVAYTALISGLCQEERYLDAEKVLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKL 392
Query: 337 FREM 340
+EM
Sbjct: 393 LKEM 396
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 84/204 (41%), Gaps = 38/204 (18%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
N +TF ++D K+ +DL E ++M + L D
Sbjct: 229 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLXPD------------------------ 264
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVG 191
L N ++ LC++ + +A LI ++S + +KP++I Y LI G C G
Sbjct: 265 ----------LITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEG 314
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLST 250
DL A + M E +I + + +A KV +M+ V D G T
Sbjct: 315 DLETAFEHRKRMIQEXIRLDDVAYTALISGLCQEERYLDAEKVLREMLSVGLKPDTG--T 372
Query: 251 YRIVIDWMCKRGKISQAYTMLEEM 274
Y ++I+ CK+G + +L+EM
Sbjct: 373 YTMIINEFCKKGDVWTGSKLLKEM 396
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 166/365 (45%), Gaps = 31/365 (8%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHI 133
+T+N ++D + K++ +D LQ M + + D +T+ + E K++V
Sbjct: 305 VTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEE 364
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDVGD 192
M G + + + ++ LC+ EA K + + IKPN YG L+ GY G
Sbjct: 365 MYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGA 424
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS--- 249
+ + + + +LM G P+ + + ++ + K DEAM +F RM GLS
Sbjct: 425 IADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFS-----RMSQHGLSPDV 479
Query: 250 -TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA----YK 304
TY I+ID +CK G++ A +M G+ +++ +S++YGL R +A ++
Sbjct: 480 VTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFE 539
Query: 305 VVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH-LGKR 363
+ ++ +P++ ++ ++ L + A ++ M + G P + +Y L+ GH L R
Sbjct: 540 MWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGR 599
Query: 364 GRKG-------------PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY 410
+ PD L+++DT+ G K G+ +A ++ +GV Y
Sbjct: 600 TDEAAQLLDVMVSVGLKPD-LISYDTLL-RGYCKTGRIDNAYCLFREMLRKGVTPGAVTY 657
Query: 411 NKFLH 415
+ L
Sbjct: 658 STILQ 662
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 144/303 (47%), Gaps = 17/303 (5%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRR-----LVNDKTFKIALMTLAEVRELKKM 127
N + N++++ + ++ +D E + + RR + N + L L + +++
Sbjct: 124 NEVVINQLLNGLCDAKRVD---EAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEA 180
Query: 128 VNFFHIMNDCG---CEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWL 183
+ H M + G C ++ N ++ LC+ + V A+ ++ + + +K + + Y +
Sbjct: 181 LELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTI 240
Query: 184 IKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM 243
I G C + A + M D+G +P + + +I+ K D A V Q M K +
Sbjct: 241 IDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGV 300
Query: 244 DDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
+ TY +ID +CK + +A +L+ M + ++ D T + +I+G L+ G +E
Sbjct: 301 KP-DVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVV 359
Query: 304 KVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
+ +EE+ PD+ Y L+ L + + EA ++F MI++G +P + Y +LL G+
Sbjct: 360 RRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGY 419
Query: 360 LGK 362
+
Sbjct: 420 AAR 422
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 161/350 (46%), Gaps = 17/350 (4%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAE 120
+++ +Q + + +T+ ++D + K +D +M + N F + L
Sbjct: 467 FSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCT 526
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIA 179
V +K F M D G ++ N ++ LC V+ A+ LI + ++PN I+
Sbjct: 527 VDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVIS 586
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
Y LI G+C G EA+++ ++M G +P + D ++ + K + D A +F+ M
Sbjct: 587 YNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREML 646
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
K + G TY ++ + + S+A + M K G + D T + I+ GL +
Sbjct: 647 RKGVTP-GAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCV 705
Query: 300 REAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
EA+K+ + + +P+I + +I L + R ++A +F + G P + TY ++
Sbjct: 706 DEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIM 765
Query: 356 LQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAA---KYVERVMNRG 402
++ ++ + G L FD +F+ + K+G + D+ + ++ RG
Sbjct: 766 MK-NIIQEGL-----LDEFDNLFL-AMEKSGCTPDSVMLNAIIRSLLGRG 808
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/265 (19%), Positives = 108/265 (40%), Gaps = 38/265 (14%)
Query: 170 SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD 229
S ++P+ Y L +C +G + + L+ G+ + V+++++ + D
Sbjct: 83 SNKVRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVD 142
Query: 230 EAMKVFQMMRVKRMDDLG----LSTYRIVIDWMCKRGKISQAYTMLEEMFKRG---IEAD 282
EAM + ++RM + G + + ++ +C ++ +A +L M + G +
Sbjct: 143 EAMDIL----LRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPN 198
Query: 283 NLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFR 338
+T ++II GL + A V++ + K D+ Y +I GL + + A V +
Sbjct: 199 VVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQ 258
Query: 339 EMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERV 398
MI +G +P + TY + GL KA A ++ +
Sbjct: 259 HMIDKGVKPDVVTY-----------------------NTIIDGLCKAQAVDRAEGVLQHM 295
Query: 399 MNRGVEVPRFDYNKFLHYYSNEEGV 423
+++GV+ YN + + V
Sbjct: 296 IDKGVKPDVVTYNTIIDGLCKAQAV 320
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 92/214 (42%), Gaps = 26/214 (12%)
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV- 306
L TY I+ C+ G+I + + K G + + ++ ++ GL R+ EA ++
Sbjct: 90 LCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILL 149
Query: 307 ----EEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRG---CEPTMHTYIMLLQG- 358
E P++ + L+KGL +R EA ++ M + G C P + TY ++ G
Sbjct: 150 RRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGL 209
Query: 359 --------------HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVE 404
H+ +G K +V + TI + GL KA A ++ ++++GV+
Sbjct: 210 CKAQAVDRAEGVLQHMIDKGVKL--DVVTYSTI-IDGLCKAQAVDRAEGVLQHMIDKGVK 266
Query: 405 VPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
YN + + V E V + + + G+
Sbjct: 267 PDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGV 300
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 171/391 (43%), Gaps = 23/391 (5%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKT-FKIALMTLAEVRELKKMVNFFHI 133
+T+ +++ + K DL L +M + ++ D + + +L + R + +N F
Sbjct: 206 VTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTE 265
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGD 192
M++ G + + ++ LC +A L+ + E I PN + + LI + G
Sbjct: 266 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGK 325
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL-GLSTY 251
LIEA K+++ M +P+I + +I F ++ DEA ++F +M K D L + TY
Sbjct: 326 LIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSK--DCLPDVVTY 383
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK 311
+I+ CK K+ + +M +RG+ + +T +++I+G A V +++
Sbjct: 384 NTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVS 443
Query: 312 ----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR-- 365
P+I Y+ L+ GL + + +A VF + K EP ++TY ++ +G + K G+
Sbjct: 444 DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEG-MCKAGKVE 502
Query: 366 -----------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
KG P V + G K G +A ++ G YN +
Sbjct: 503 DGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLI 562
Query: 415 HYYSNEEGVVMFEEVGKKLREVGLADLADIF 445
+ + E+ K++R A A +
Sbjct: 563 RAHLRDGDKAASAELIKEMRSCRFAGDASTY 593
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 166/376 (44%), Gaps = 45/376 (11%)
Query: 60 FQYTQKAQPCFAHNSITFNRMVDIIGK---SRN----------IDLFWETLQEMGRRRLV 106
F + +KA P F I F+ + + SRN +DLF E ++ +V
Sbjct: 7 FVHLRKASPSFCLRGIYFSGLSYDGYREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIV 66
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
F L +A++++ +++F M G ++L N ++ LC+R + A ++
Sbjct: 67 E---FSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAIL 123
Query: 167 LKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI 225
K+ + P+ + L+ G+C + EA + + M + G++P ++ F+
Sbjct: 124 GKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQH 183
Query: 226 NKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
NK EA+ + + M VK L TY VI+ +CKRG+ A +L +M K IEAD +
Sbjct: 184 NKASEAVALVERMVVKGCQP-DLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 242
Query: 286 LSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMI 341
S++I L + +A + E++ +PD+ Y LI L R +A+++ +M+
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML 302
Query: 342 KRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNR 401
+R P + T+ L+ K GK ++A K + ++ R
Sbjct: 303 ERKINPNVVTFNSLID-----------------------AFAKEGKLIEAEKLFDEMIQR 339
Query: 402 GVEVPRFDYNKFLHYY 417
++ YN ++ +
Sbjct: 340 SIDPNIVTYNSLINGF 355
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 135/306 (44%), Gaps = 41/306 (13%)
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS--- 249
L EA ++ M PSI K++ K+ K D + + M + LG+S
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEI-----LGVSHNL 100
Query: 250 -TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY I+I+ +C+R ++S A +L +M K G +TL+S++ G R+ EA +V++
Sbjct: 101 YTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQ 160
Query: 309 I----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
+ +PD + L+ GL + +A EA + M+ +GC+P + TY ++ G L KRG
Sbjct: 161 MVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING-LCKRG 219
Query: 365 RKGPDPLVNF-----------DTIF----VGGLVKAGKSLDAAKYVERVMNRGVEVPRFD 409
PD +N D + + L K DA + N+G+ F
Sbjct: 220 E--PDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFT 277
Query: 410 YNKFLHYYSN-----EEGVVMFEEVGKKLRE--VGLADLADIFQRYGKKMATR---ERRR 459
Y+ + N + ++ + + +K+ V L D F + GK + +
Sbjct: 278 YSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMI 337
Query: 460 NRAIEP 465
R+I+P
Sbjct: 338 QRSIDP 343
>gi|449433055|ref|XP_004134313.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18950-like [Cucumis sativus]
Length = 602
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 115/216 (53%), Gaps = 6/216 (2%)
Query: 148 KVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDE 206
+++ C+ + ++A + L + P+ + Y LI G+C +G L +ASK+W M D+
Sbjct: 302 EIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDK 361
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQ 266
GF P+ + +I F KI DEAMK+++ M + LS +++ +C G+ +
Sbjct: 362 GFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILG-LCLHGRTDE 420
Query: 267 AYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIK 322
AY EM + I D +T +++I G G++ ++ +++E++ +P S Y LI+
Sbjct: 421 AYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQ 480
Query: 323 GLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
L +L +EA +++ +M RG +P + T ++ G
Sbjct: 481 KLCQLGSVQEAKEMWNDMHNRGLQPMVCTRDHIISG 516
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/350 (20%), Positives = 155/350 (44%), Gaps = 31/350 (8%)
Query: 91 DLFW---ETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLN 147
DL W E + E G ++ V+ +T + ++ + + G + N
Sbjct: 207 DLIWKLYEGMMETGVQKDVDIETVGYLIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFN 266
Query: 148 KVVKTLCQRKLVVEAKYLILKLSEWI-----KPNEIAYGWLIKGYCDVGDLIEASKIWNL 202
K++ C+ K + +L+L + P+ Y +I G+C ++A +++N
Sbjct: 267 KLISGFCKEK----NHHRVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFNA 322
Query: 203 MTDEGFEPSIDVVDKMIETFFKINKDDEAMKV-FQMMRVKRMDDLGLSTYRIVIDWMCKR 261
+ D G+ P + + +I F K+ + ++A K+ F+M+ + + +Y +I CK
Sbjct: 323 LKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPN--EYSYNTLIYGFCKI 380
Query: 262 GKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP----DISLY 317
G + +A + ++M G + L+ +++I GL GR EAY E+ D+ Y
Sbjct: 381 GNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNIVCDVITY 440
Query: 318 HGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG--HLGK----------RGR 365
+ LI+G R + ++T + +E+ +G +P+ +Y L+Q LG
Sbjct: 441 NTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEAKEMWNDMHN 500
Query: 366 KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
+G P+V + GL + G ++ +++ ++ ++ + + K +
Sbjct: 501 RGLQPMVCTRDHIISGLCEQGYVVEGMEWLITMLKSNLKPQKETFYKLIQ 550
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 109/274 (39%), Gaps = 30/274 (10%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDE 206
NK+ L + K V AK + P + I+ C+ G + EA ++++ +
Sbjct: 127 NKLFDALLEAKACVPAKSFLYSFE--FSPEPASLENYIRCVCEGGLVEEAVYTFDMLKEA 184
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQ-MMRVKRMDDLGLSTYRIVIDWMCKRGKIS 265
G+ P ++ + ++ K + D K+++ MM D+ + T +I C K+S
Sbjct: 185 GYRPYVETWNFAFQSCLKFGRTDLIWKLYEGMMETGVQKDVDIETVGYLIQAFCNDNKVS 244
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLI 321
+AY +L + + G+ N + +I G ++V + PDI Y +I
Sbjct: 245 RAYEILRQSLEDGLTPCNDAFNKLISGFCKEKNHHRVLELVHTMIVKNRNPDIFTYQEII 304
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGG 381
G + +A +VF + RG P M Y T + G
Sbjct: 305 NGFCKNWMTLQAFEVFNALKDRGYAPDMVMY-----------------------TTLIHG 341
Query: 382 LVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
K G+ DA+K ++++G + YN ++
Sbjct: 342 FCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIY 375
>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
Length = 509
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 162/369 (43%), Gaps = 26/369 (7%)
Query: 58 LFFQYTQKAQPCFAHNSITFNRMVDII---GKSRNI-DLFWETLQEMGRRRLVNDKTFKI 113
LFFQ+ KA+P F HN+ T N ++++ G R +F + L + R +D T+
Sbjct: 2 LFFQWA-KARPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRP---DDFTYGT 57
Query: 114 ALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW- 172
+ + ++ + VN M G ++ +++ LC+ +A + ++ +
Sbjct: 58 LIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMK 117
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
+KP+ Y +I C + L A+ + M G P ++ + FK K ++
Sbjct: 118 VKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGH 177
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
++F+ M + + L TY V++ CK G+I QA +++ + G S++I G
Sbjct: 178 QIFEEM-LSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDG 236
Query: 293 LLARGRLREAYKVVEEI--EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
L R EA ++ E + D+ +Y I GL + + EA V +MI+ GC P
Sbjct: 237 LCKHDRHDEARELFEMAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPV 296
Query: 351 TYIMLLQGHLGKRGRKGPD-------------PLVNFDTIFVGGLVKAGKSLDAAKYVER 397
+Y +++ L K R P V T+ V GL K+ + +A +ER
Sbjct: 297 SYNVIIYS-LCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILER 355
Query: 398 VMNRGVEVP 406
++ G P
Sbjct: 356 MLETGDRAP 364
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 93/412 (22%), Positives = 175/412 (42%), Gaps = 36/412 (8%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+TF ++ + + D + +M ++ D + + + L ++ +L ++F
Sbjct: 88 VTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFER 147
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAK----YLILK--LSEWIKPNEIAYGWLIKGY 187
M GC + +KV T+ L K + I + LS+ P + Y ++ GY
Sbjct: 148 MVQSGC-----LPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGY 202
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C G + +A + + G PS + +I+ K ++ DEA ++F+M D
Sbjct: 203 CKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFEMAAGDVQD--- 259
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
+ Y I +CK GK+ +A + +M + G D ++ + IIY L R+ EA ++++
Sbjct: 260 VIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMD 319
Query: 308 EIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGC-EPTMHTYIMLLQGH--- 359
+ + P + + L+ GL + RR EA + M++ G P++ TY ++ G
Sbjct: 320 QAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKA 379
Query: 360 ---------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY 410
L K R G P V T + K G+ +A + +R+ RG + Y
Sbjct: 380 DRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAY 439
Query: 411 NKFLHYYSN----EEGVVMFEEVGKKLREVGLADLADIFQRYGKKMATRERR 458
N + Y +E + M EE+ + + + L+ I K+ E R
Sbjct: 440 NILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEAR 491
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 121/265 (45%), Gaps = 21/265 (7%)
Query: 168 KLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINK 227
+L +P++ YG LI+G+C + +A + M G P+I +I ++N
Sbjct: 43 ELVTLFRPDDFTYGTLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNF 102
Query: 228 DDEAMKVF-QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTL 286
D+A+++F QM+ +K D L Y +VI +CK K+ A + E M + G D +T
Sbjct: 103 TDKALQIFHQMIDMKVKPDAFL--YTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTY 160
Query: 287 SSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIK 342
+ +++ L + + +++ EE+ P++ Y ++ G + R +A + R +
Sbjct: 161 TVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKG 220
Query: 343 RGCEPTMHTYIMLLQGHLGKRGR-----------KGPDPLVNFDTIFVGGLVKAGKSLDA 391
G P+ Y L+ G L K R G V T F+ GL KAGK LD
Sbjct: 221 TGRSPSGSLYSTLIDG-LCKHDRHDEARELFEMAAGDVQDVIVYTSFISGLCKAGK-LDE 278
Query: 392 AKYVE-RVMNRGVEVPRFDYNKFLH 415
AK V +++ G YN ++
Sbjct: 279 AKAVHVKMIEAGCAPDPVSYNVIIY 303
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 90/173 (52%), Gaps = 3/173 (1%)
Query: 139 CEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWI--KPNEIAYGWLIKGYCDVGDLIEA 196
C + + +V LC+ + V EA ++ ++ E P+ + Y +I G C L +A
Sbjct: 326 CMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDA 385
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVID 256
+ M G P + +I+ F K+ + DEA ++FQ M +R L + Y I+I
Sbjct: 386 YVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMH-ERGCALDVVAYNILIR 444
Query: 257 WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
C+ K+ +A M+EEM RGI+ + ++LS+I+ GL R+ EA ++E++
Sbjct: 445 GYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLMEKM 497
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 67/143 (46%), Gaps = 2/143 (1%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVN 129
A + +T++ ++D + K+ +D + LQ+M R V D T+ + +V L +
Sbjct: 363 APSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARE 422
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYC 188
F M++ GC + N +++ C+ V EA +I +++ I+PN ++ ++ G C
Sbjct: 423 LFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLC 482
Query: 189 DVGDLIEASKIWNLMTDEGFEPS 211
+ EA + M E S
Sbjct: 483 KESRVEEARLLMEKMNFESLPDS 505
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 74/170 (43%), Gaps = 5/170 (2%)
Query: 80 MVDIIGKSRNID---LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMND 136
+VD + KSR ++ + E + E G R + T+ + L + L M
Sbjct: 336 LVDGLCKSRRVEEACVILERMLETGDRA-PSVVTYSAVIDGLCKADRLDDAYVVLQKMRR 394
Query: 137 CGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIE 195
GC + ++ C+ + EA+ L ++ E + +AY LI+GYC + E
Sbjct: 395 AGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDE 454
Query: 196 ASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD 245
A + M G +P++ + +++ K ++ +EA + + M + + D
Sbjct: 455 AIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLMEKMNFESLPD 504
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 132/292 (45%), Gaps = 20/292 (6%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEA 196
GC+ L VV LC+R A L+ K+ + ++P + Y +I G C + +A
Sbjct: 216 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 275
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVID 256
++ M +G P++ +I + +A ++ M ++R + + T+ +ID
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM-IERKINPDVFTFSALID 334
Query: 257 WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----P 312
K GK+ +A + +EM KR I+ +T SS+I G RL EA ++ E + P
Sbjct: 335 AFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP 394
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG-------- 364
D+ Y+ LIKG + +R E +VFREM +RG TY +L+QG L + G
Sbjct: 395 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG-LFQAGDCDMAQEI 453
Query: 365 -----RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
G P + + GL K GK A E + +E + YN
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 505
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 168/384 (43%), Gaps = 21/384 (5%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+T+ +V+ + K + DL + L +M + +L + + L + + + +N F
Sbjct: 222 VTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKE 281
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGD 192
M G ++ + ++ LC +A L+ + E I P+ + LI + G
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
L+EA K+++ M +PSI +I F ++ DEA ++F+ M V + + TY
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM-VSKHCFPDVVTYN 400
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK- 311
+I CK ++ + + EM +RG+ + +T + +I GL G A ++ +E+
Sbjct: 401 TLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD 460
Query: 312 ---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR--- 365
P+I Y+ L+ GL + + +A VF + + EPT++TY ++++G + K G+
Sbjct: 461 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEG-MCKAGKVED 519
Query: 366 ----------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
KG P V + G + G +A + + G YN +
Sbjct: 520 GWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIR 579
Query: 416 YYSNEEGVVMFEEVGKKLREVGLA 439
+ E+ K++R G A
Sbjct: 580 ARLRDGDREASAELIKEMRSCGFA 603
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 155/344 (45%), Gaps = 24/344 (6%)
Query: 111 FKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS 170
F L +A++ + +++ M + G ++ + ++ C+R + A ++ K+
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMM 143
Query: 171 EW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD 229
+ +PN + L+ GYC + EA + + M G++P+ + +I F NK
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS 203
Query: 230 EAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSI 289
EAM + M K L TY +V++ +CKRG A+ +L +M + +E L ++I
Sbjct: 204 EAMALIDRMVAKGCQP-DLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTI 262
Query: 290 IYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGC 345
I GL + +A + +E+E +P++ Y LI L R +A+++ +MI+R
Sbjct: 263 IDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 322
Query: 346 EPTMHTYIMLLQGHLGKRG-------------RKGPDPLVNFDTIFVGGLVKAGKSLDAA 392
P + T+ L+ + K G ++ DP + + + G + +A
Sbjct: 323 NPDVFTFSALIDAFV-KEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 381
Query: 393 KYVERVMNRGVEVPRFDYNK----FLHYYSNEEGVVMFEEVGKK 432
+ E ++++ YN F Y EEG+ +F E+ ++
Sbjct: 382 QMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR 425
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 89/163 (54%), Gaps = 14/163 (8%)
Query: 210 PSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKIS 265
PSI K++ K+NK D + + + +M +LG+ TY I+I+ C+R ++
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGE-----QMQNLGIPHNHYTYSILINCFCRRSQLP 133
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLI 321
A +L +M K G E + +TLSS++ G R+ EA +V+++ +P+ ++ LI
Sbjct: 134 LALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLI 193
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
GL +A EA + M+ +GC+P + TY +++ G L KRG
Sbjct: 194 HGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNG-LCKRG 235
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 86/180 (47%), Gaps = 2/180 (1%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAE 120
+ + +Q N++T+N ++ + ++ + D+ E +EM + N T+ L L +
Sbjct: 419 FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 478
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIA 179
+L+K + F + E ++ N +++ +C+ V + L LS + +KP+ +A
Sbjct: 479 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVA 538
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
Y +I G+C G EA ++ M ++G P+ + +I + + + ++ + MR
Sbjct: 539 YNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 598
>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 135/278 (48%), Gaps = 19/278 (6%)
Query: 179 AYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
AY +I G+C G + +A ++ M +GFEP++ +I+ KI++ DEA +F+
Sbjct: 589 AYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 648
Query: 239 RVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR 298
+ KR++ L + Y +ID K G+I +AY +LEE+ ++G+ + T +S++ L+
Sbjct: 649 KSKRIE-LNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEE 707
Query: 299 LREA---YKVVEEIE-KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIM 354
+ EA ++ ++E++ P+ Y LI GL ++R+ +A ++EM K+G +P+ +Y
Sbjct: 708 INEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTT 767
Query: 355 LLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNR 401
++ G L K G G P + GL +++DA E R
Sbjct: 768 MISG-LAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRR 826
Query: 402 GVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLA 439
G+ + L + + VG LRE G A
Sbjct: 827 GLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETGKA 864
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 146/328 (44%), Gaps = 40/328 (12%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVN 129
A N T+N ++D++ ++ +D +E M + L N +T I + L + ++L +
Sbjct: 374 APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACA 433
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYC 188
F M+ C ++ L + V +A + K L + N I Y LIK +
Sbjct: 434 MFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFF 493
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR------ 242
+ G + KI+ M ++ P + +++ ++ FK + ++ +F+ ++ +R
Sbjct: 494 NHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDAR 553
Query: 243 ------------------------MDDLGL----STYRIVIDWMCKRGKISQAYTMLEEM 274
M + G Y IVID CK GK+++AY +LEEM
Sbjct: 554 SYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEM 613
Query: 275 FKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISL----YHGLIKGLLRLRRA 330
+G E +T S+I GL RL EAY + EE + I L Y LI G ++ R
Sbjct: 614 KTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRI 673
Query: 331 REATQVFREMIKRGCEPTMHTYIMLLQG 358
EA + E++++G P ++T+ LL
Sbjct: 674 DEAYLILEELMQKGLTPNLYTWNSLLDA 701
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 150/363 (41%), Gaps = 55/363 (15%)
Query: 77 FNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKT-FKIALMTLAEVRELKKMVNFFHIMN 135
F ++ K +D L EM L D + + + + +V ++ FFH +
Sbjct: 206 FTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIE 265
Query: 136 DCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIK-PNEIAYGWLIKGYCDVGDLI 194
G + ++ LC+ + EA + L + + P AY +I GY G
Sbjct: 266 ANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFD 325
Query: 195 EASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIV 254
EA + +G PS+ + ++ K+ K DEA+KVF+ M+ +L STY I+
Sbjct: 326 EAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNL--STYNIL 383
Query: 255 IDWMCKRGKISQAY-----------------------------------TMLEEMFKRGI 279
ID +C+ GK+ A+ M EEM +
Sbjct: 384 IDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVC 443
Query: 280 EADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDIS----LYHGLIKGLLRLRRAREATQ 335
D +T S+I GL GR+ +AYKV E++ D +Y LIK R + +
Sbjct: 444 TPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHK 503
Query: 336 VFREMIKRGCEPT---MHTYI-MLLQGHLGKRGRKGPD--------PLVNFDTIFVGGLV 383
++++MI + C P ++TY+ + + ++GR + P +I + GL+
Sbjct: 504 IYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLI 563
Query: 384 KAG 386
KAG
Sbjct: 564 KAG 566
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 141/288 (48%), Gaps = 9/288 (3%)
Query: 74 SITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHI 133
SI + ++ + +LF+ +++E G +++ + + I + + ++ K
Sbjct: 556 SILIHGLIKAGFANETYELFY-SMKEQGC--VLDTRAYNIVIDGFCKCGKVNKAYQLLEE 612
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGD 192
M G E ++ V+ L + + EA L + S+ I+ N + Y LI G+ VG
Sbjct: 613 MKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGR 672
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ EA I + +G P++ + +++ K + +EA+ FQ M+ + + TY
Sbjct: 673 IDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQV-TYG 731
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK- 311
I+I+ +CK K ++A+ +EM K+G++ ++ +++I GL G + EA + + +
Sbjct: 732 ILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKAN 791
Query: 312 ---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
PD + Y+ +I+GL RA +A +F E +RG T ++LL
Sbjct: 792 GGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLL 839
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 101/465 (21%), Positives = 183/465 (39%), Gaps = 66/465 (14%)
Query: 11 VCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCF 70
+C +L + P + ++LS+ +F EF + + R + F Y ++ +
Sbjct: 39 ICNVLETGPWGPSA--ENTLSALSFKPQPEFVIGVLRRLKDVNRAIEYFRWYERRTE--L 94
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNF 130
H ++N ++ ++ + RN D + L EM + F
Sbjct: 95 PHCPESYNSLLLVMARCRNFDALDQILGEM-------------------------SVAGF 129
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIK--PNEIAYGWLIKGYC 188
+N C +EM+ VK R+ Y ++++ K P AY LI +
Sbjct: 130 GPSVNTC-----IEMVLGCVKANKLRE-----GYDVVQMMRKFKFRPAFSAYTTLIGAFS 179
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
V ++ M + G+EP++ + +I F K + D A+ + M+ + D +
Sbjct: 180 AVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSL-DADI 238
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
Y + ID K GK+ A+ E+ G++ D +T +S+I L RL EA ++ E
Sbjct: 239 VLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEH 298
Query: 309 IEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY--IMLLQGHLGK 362
+EK P Y+ +I G + EA + +G P++ Y I+ +GK
Sbjct: 299 LEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGK 358
Query: 363 ---------RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFD---- 409
+K P ++ I + L +AGK LD A + M + P
Sbjct: 359 VDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGK-LDTAFELRDSMQKAGLFPNVRTVNI 417
Query: 410 -YNKFLHYYSNEEGVVMFEEVGKKL---REVGLADLADIFQRYGK 450
++ +E MFEE+ K+ E+ L D + G+
Sbjct: 418 MVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGR 462
>gi|225450630|ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial [Vitis vinifera]
gi|296089757|emb|CBI39576.3| unnamed protein product [Vitis vinifera]
Length = 586
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 155/342 (45%), Gaps = 13/342 (3%)
Query: 24 SRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDI 83
S+LH S C NL F+ + N+ + RP + + + +FN +++
Sbjct: 159 SQLHKSQIKCGENL----FITVIRNYGFAGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNT 214
Query: 84 IGKSRNIDLFWETLQEMGRRRLV--NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEY 141
+ +++ DL + ++ + N T I + L + ++ + M G
Sbjct: 215 LVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIP 274
Query: 142 SLEMLNKVVKTLCQRKLVVEAKYLILKLSE--WIKPNEIAYGWLIKGYCDVGDLIEASKI 199
++ ++ + +V A+ + ++ + W+ P+ Y L+ GYC G ++A K+
Sbjct: 275 NVVTYTTILGGYVSKGDMVGARRVFGEILDRGWV-PDPTTYTILMDGYCKKGRFMDAVKV 333
Query: 200 WNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMC 259
+ M + EP+ +IE + K K E + + M K+ R VID +C
Sbjct: 334 MDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCR-VIDMLC 392
Query: 260 KRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK---PDISL 316
+ GK+ A + +++ K+ DN S++I+ L G++ EA K+ +E EK P
Sbjct: 393 EEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDEFEKGSIPSTLT 452
Query: 317 YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
Y+ LI G+ EA +++ M+++GC P TY ML++G
Sbjct: 453 YNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKG 494
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 134/340 (39%), Gaps = 79/340 (23%)
Query: 56 VYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIA 114
V+L F+ +K + N T N +V + K +ID L+EM + N T+
Sbjct: 224 VHLMFKNCRK-KFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTI 282
Query: 115 LMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WI 173
L ++ F + D G ++ C++ ++A ++ ++ E +
Sbjct: 283 LGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRV 342
Query: 174 KPNEIAYGWLIKGYCD----------VGDLIE-------------------------ASK 198
+PN++ YG +I+ YC + D++E A +
Sbjct: 343 EPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACE 402
Query: 199 IWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWM 258
+W + + P D+ ST +I W+
Sbjct: 403 LWKKLLKKNCTP---------------------------------DNAITST---LIHWL 426
Query: 259 CKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV----VEEIEKPDI 314
CK GK+ +A + +E F++G LT +++I G+ G L EA ++ VE+ P+
Sbjct: 427 CKEGKVWEARKLFDE-FEKGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNA 485
Query: 315 SLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIM 354
Y+ LIKG ++ ARE +V EM+ GC P TY +
Sbjct: 486 FTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPNKATYAI 525
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 50/124 (40%), Gaps = 16/124 (12%)
Query: 312 PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKG---- 367
P++ + L+K L + A +V EM G P + TY +L G++ K G
Sbjct: 239 PNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRV 298
Query: 368 ----------PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
PDP TI + G K G+ +DA K ++ + VE Y + Y
Sbjct: 299 FGEILDRGWVPDPTTY--TILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAY 356
Query: 418 SNEE 421
E+
Sbjct: 357 CKEK 360
>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
Length = 530
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 132/293 (45%), Gaps = 7/293 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
+++ F +++ I K ++ +M + D T I + + +R L +
Sbjct: 111 STVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVL 170
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDV 190
+ GC+ N +++ LC + EA +L K + E +P+ + YG L+ G C V
Sbjct: 171 AKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKV 230
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G+ A ++ M + P++ + +I++ K + EA +F M K + + T
Sbjct: 231 GNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISP-DIFT 289
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y +I +C + T+L EM I + + S+++ L G + A+ VV+ +
Sbjct: 290 YNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMI 349
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
K PD+ Y L+ G EA +VF M+ +GC P + +Y +L+ G+
Sbjct: 350 KRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGY 402
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 132/280 (47%), Gaps = 13/280 (4%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMV 128
F + +T+ +++ + K N L+ M ++ N + + +L + R++ +
Sbjct: 213 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 272
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIK----PNEIAYGWLI 184
N F M G + N ++ LC + E K++ L+E + PN + + ++
Sbjct: 273 NLFSEMITKGISPDIFTYNSLIHALCN---LCEWKHVTTLLNEMVNSKIMPNVVVFSTVV 329
Query: 185 KGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD 244
C G + A + ++M G EP + +++ ++ DEA+KVF M V +
Sbjct: 330 DALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTM-VHKGC 388
Query: 245 DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK 304
+ +Y I+I+ C+ ++ +A +LE+M +G+ AD +T +++I+GL GRL+ A
Sbjct: 389 VPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIA 448
Query: 305 VVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREM 340
+ E+ + PD+ Y L+ L + EA + + +
Sbjct: 449 LFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAI 488
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 120/266 (45%), Gaps = 36/266 (13%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N I +N ++D + K R + + EM + + D T+ + L + E K +
Sbjct: 251 NVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLL 310
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDV 190
+ M + ++ + + VV LC+ ++ A ++ + + ++P+ + Y L+ G+C
Sbjct: 311 NEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLR 370
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM--DDLG- 247
++ EA K+++ M +G P++ + +I + +I + D+AM + + M ++ + D +
Sbjct: 371 SEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTY 430
Query: 248 -------------------------------LSTYRIVIDWMCKRGKISQAYTMLEEMFK 276
L TYRI++D++CK +++A +L+ +
Sbjct: 431 NTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEG 490
Query: 277 RGIEADNLTLSSIIYGLLARGRLREA 302
++AD L + I G+ G L A
Sbjct: 491 SNLDADILVYNIAIDGMCRAGELEAA 516
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 84/186 (45%), Gaps = 31/186 (16%)
Query: 242 RMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
+MD G+ T I+I+ C ++ A+++L ++ K G + DN T +++I GL G
Sbjct: 137 QMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEG 196
Query: 298 RLREAY----KVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYI 353
++ EA K + E +PD+ Y L+ GL ++ A ++ R M+++ C P
Sbjct: 197 KIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPN----- 251
Query: 354 MLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
++ ++TI + L K + +A ++ +G+ F YN
Sbjct: 252 -----------------VIAYNTI-IDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSL 293
Query: 414 LHYYSN 419
+H N
Sbjct: 294 IHALCN 299
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 97/211 (45%), Gaps = 3/211 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVR-ELKKMVNFF 131
N + F+ +VD + K I + + + M +R + D ALM +R E+ + V F
Sbjct: 321 NVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVF 380
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDV 190
M GC ++ N ++ CQ + + +A L+ ++S + + + + Y LI G C V
Sbjct: 381 DTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHV 440
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G L A +++ M G P + +++ K + EAM + + + +D +
Sbjct: 441 GRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDA-DILV 499
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEA 281
Y I ID MC+ G++ A + + +G A
Sbjct: 500 YNIAIDGMCRAGELEAARDLFSNLSCQGFAA 530
>gi|110738150|dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
Length = 642
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 170/389 (43%), Gaps = 41/389 (10%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+T+N M+ K+ E L++M R DK T+ + + V +
Sbjct: 240 VTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQE 299
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK--LSEWIKPNEIAYGWLIKGYCDVG 191
M++ G + + V+ LC+ + E Y + + + + KPN Y LI GY G
Sbjct: 300 MDEKGIQVPPHAFSLVIGGLCKEGKLNEG-YTVFENMIRKGSKPNVAIYTVLIDGYAKSG 358
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST- 250
+ +A ++ + M DEGF+P + ++ K + +EA+ F R D L +++
Sbjct: 359 SVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTC---RFDGLAINSM 415
Query: 251 -YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA---YKVV 306
Y +ID + K G++ +A + EEM ++G D+ +++I ++ EA +K +
Sbjct: 416 FYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRM 475
Query: 307 EEIEKPDISLYHG--LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL--GK 362
EE E D ++Y L+ G+ + R EA +++ MI +G PT + L G GK
Sbjct: 476 EEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGK 535
Query: 363 RGR--KGPDPLVNFDTIF-------VGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
R K D L I + L KAG+ +A K + + RG EVP
Sbjct: 536 VARACKILDELAPMGVILDAACEDMINTLCKAGRIKEACKLADGITERGREVP------- 588
Query: 414 LHYYSNEEGVVMFEEVGKKLREVGLADLA 442
VM LR+VG ADLA
Sbjct: 589 -----GRIRTVMI----NALRKVGKADLA 608
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 147/320 (45%), Gaps = 17/320 (5%)
Query: 56 VYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIAL 115
+ FF +++K Q + HN + +VD++ ++++D E+ + + AL
Sbjct: 117 AWSFFCWSRK-QKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANAL 175
Query: 116 M-TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWI 173
+ + ++ +++++ + M + G E +L N ++ L V A+ + + S I
Sbjct: 176 IKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRI 235
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
KP+ + Y +IKGYC G +A + M G E MI+ + + +
Sbjct: 236 KPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVA 295
Query: 234 VFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSI 289
++Q MD+ G+ + +VI +CK GK+++ YT+ E M ++G + + + +
Sbjct: 296 LYQ-----EMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVL 350
Query: 290 IYGLLARGRLREA----YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGC 345
I G G + +A +++++E KPD+ Y ++ GL + R EA F G
Sbjct: 351 IDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGL 410
Query: 346 EPTMHTYIMLLQGHLGKRGR 365
Y L+ G LGK GR
Sbjct: 411 AINSMFYSSLIDG-LGKAGR 429
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 84/208 (40%), Gaps = 51/208 (24%)
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
+ +S +I K G + + + +M + GIE T + ++ GL++ + A +V
Sbjct: 167 MTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERV 226
Query: 306 VEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ---- 357
E +E KPDI Y+ +IKG + + ++A + R+M RG E TY+ ++Q
Sbjct: 227 FEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYA 286
Query: 358 ------------------------------GHLGKRG-------------RKGPDPLVNF 374
G L K G RKG P V
Sbjct: 287 DSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAI 346
Query: 375 DTIFVGGLVKAGKSLDAAKYVERVMNRG 402
T+ + G K+G DA + + R+++ G
Sbjct: 347 YTVLIDGYAKSGSVEDAIRLLHRMIDEG 374
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 75/179 (41%), Gaps = 4/179 (2%)
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGW--LIKGY 187
F M++ GC N ++ + + V EA L ++ E ++ Y + L+ G
Sbjct: 436 LFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGM 495
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
EA K+W++M D+G P+ + K A K+ + M +
Sbjct: 496 FKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILD--ELAPMGVIL 553
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
+ +I+ +CK G+I +A + + + +RG E + +I L G+ A K++
Sbjct: 554 DAACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMKLM 612
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 135/302 (44%), Gaps = 16/302 (5%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
N +T+N +++ K E EM R ++ N T+ + + L + F
Sbjct: 322 NVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMF 381
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
++M GC + ++ C K + + L+ ++ + N + Y LI G+C V
Sbjct: 382 YLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLV 441
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD------ 244
GDL A + M G P I + +++ K +A+++F+ M+ +MD
Sbjct: 442 GDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHP 501
Query: 245 ----DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
+ + TY I+I + GK +A + EEM RGI D +T SS+I GL + RL
Sbjct: 502 FNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLD 561
Query: 301 EAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
EA ++ + P++ ++ LI G + R + ++F EM +RG YI L+
Sbjct: 562 EATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLI 621
Query: 357 QG 358
G
Sbjct: 622 YG 623
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 154/360 (42%), Gaps = 20/360 (5%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHI 133
I FN+++ + + DL Q+M R+++ D +F I + +L ++ F
Sbjct: 82 IDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGK 141
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDL 193
+ G + ++ LC V EA L ++ +P+ + + L+ G C G +
Sbjct: 142 LTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQIC---RPDVLTFTTLMNGLCREGRV 198
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
+EA + + M + G +P ++ K+ A+ + + M + Y
Sbjct: 199 VEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSA 258
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK-- 311
+ID +CK G+ S ++ + EM +GI + +T + +I G GR A ++++E+ +
Sbjct: 259 IIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERK 318
Query: 312 --PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR------ 363
P++ Y+ LI ++ + EA +++ EM+ RG P TY ++ G +
Sbjct: 319 ISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAE 378
Query: 364 ------GRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
KG P V T + G A + D + + + RG+ YN +H +
Sbjct: 379 DMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGF 438
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 112/261 (42%), Gaps = 15/261 (5%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAE 120
Y + C + + TF ++D ++ ID E L EM RR LV N T+ +
Sbjct: 382 YLMATKGC-SPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCL 440
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE--------- 171
V +L ++ M G + N ++ LC + +A + + +
Sbjct: 441 VGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASH 500
Query: 172 ---WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++P+ + Y LI G + G +EA +++ M G P MI+ K ++
Sbjct: 501 PFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 560
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
DEA ++F M K + T+ +I+ CK G++ + EM +RGI AD + +
Sbjct: 561 DEATQMFVSMGSKSFSP-NVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYIT 619
Query: 289 IIYGLLARGRLREAYKVVEEI 309
+IYG G + A + +E+
Sbjct: 620 LIYGFRKVGNINGALDIFQEM 640
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 111/253 (43%), Gaps = 33/253 (13%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
I+ + ++ LIK +C L A + +T G P + ++ ++ EA+
Sbjct: 112 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEAL 171
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
+F ++ R D L T+ +++ +C+ G++ +A +L+ M + G++ D +T + + G
Sbjct: 172 DLFH--QICRPDVL---TFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDG 226
Query: 293 LLARGRLREAYKVVEEIE-----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
+ G A ++ ++E KP++ +Y +I GL + R ++ +F EM +G P
Sbjct: 227 MCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFP 286
Query: 348 TMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPR 407
+ TY +GG +G+ A + ++ ++ R +
Sbjct: 287 NIVTY-----------------------NCMIGGFCISGRWSAAQRLLQEMLERKISPNV 323
Query: 408 FDYNKFLHYYSNE 420
YN ++ + E
Sbjct: 324 VTYNALINAFVKE 336
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 100/216 (46%), Gaps = 16/216 (7%)
Query: 210 PSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYT 269
PS+ +K++ ++ + D + ++Q M K++ + ++ I+I C K+ A +
Sbjct: 79 PSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIR-CDIYSFTILIKCFCSCSKLPFALS 137
Query: 270 MLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRR 329
++ K G+ D +T +++++GL R+ EA + +I +PD+ + L+ GL R R
Sbjct: 138 TFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRPDVLTFTTLMNGLCREGR 197
Query: 330 AREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG---------RKGPD-----PLVNFD 375
EA + M++ G +P TY + G + K G RK + P V
Sbjct: 198 VVEAVALLDRMVENGLQPDQITYGTFVDG-MCKMGDTVSALNLLRKMEEISHIKPNVVIY 256
Query: 376 TIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
+ + GL K G+ D+ + ++G+ YN
Sbjct: 257 SAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYN 292
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 160/353 (45%), Gaps = 38/353 (10%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
+++++ M++ + +++ L + L++M L N + I +M A +++
Sbjct: 437 SAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLL 496
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
M+ G + N ++ L + + EA +L++ +KP+ + +G I GY
Sbjct: 497 DGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKT 556
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG--- 247
G + EA+K ++ M D G P+ + +I FK EA+ +F +R+ LG
Sbjct: 557 GKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIF-----RRLHALGVLP 611
Query: 248 -LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
+ T I + K G++ +A + E+ ++G+ D T SS+I G +G + +A+++
Sbjct: 612 DVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELH 671
Query: 307 EEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
+E+ P+I +Y+ L+ GL + + A ++F M ++G EP TY ++ G+
Sbjct: 672 DEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGY--- 728
Query: 363 RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
K+ +A + ++GV+ F YN +H
Sbjct: 729 --------------------CKSENVAEAFSLFHEMPSKGVQPHSFVYNALVH 761
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 156/363 (42%), Gaps = 21/363 (5%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHI 133
I N ++ + K ++LFW+ M ++ D T+ + L + +L+
Sbjct: 194 IRCNSLLKDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIE 253
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M++ G + + + V++ +CQ + EA L + E + PN Y + G C
Sbjct: 254 MDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKR 313
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ EA + M G +P + +I+ F + DE +++ +M V + L TY
Sbjct: 314 MNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVM-VSCGIPINLITYN 372
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK- 311
++I +CK GK+ +A +L+ M G + ++ T +I G + A ++++E+EK
Sbjct: 373 VLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKR 432
Query: 312 ---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR--- 365
P Y +I GL + A ++ +M G +P + Y +L+ + GR
Sbjct: 433 NLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAY-ASEGRIEE 491
Query: 366 ----------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
G P + + L KAGK +A+ Y+ + RG++ + F+
Sbjct: 492 ARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFIL 551
Query: 416 YYS 418
YS
Sbjct: 552 GYS 554
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 164/353 (46%), Gaps = 29/353 (8%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVNFFHIM 134
T++ ++ K ++ +E EM + + + AL+ L + ++++ F M
Sbjct: 650 TYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGM 709
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDL 193
+ G E + ++ C+ + V EA L ++ S+ ++P+ Y L+ G C GD+
Sbjct: 710 PEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDM 769
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR-MDDLGLSTYR 252
+A ++ M +GF ++ + +I+ + K K EA ++FQ M K+ M D TY
Sbjct: 770 EKAMNLFREMLQKGFATTLSF-NTLIDGYCKSCKIQEASQLFQEMIAKQIMPDH--VTYT 826
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI--- 309
VIDW CK GK+ +A + +EM +R + D +T +S++YG G+ E + + E++
Sbjct: 827 TVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAK 886
Query: 310 -EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRG--CEPTMHTYIMLLQGHLGKR--- 363
KPD Y +I + EA ++ E++ +G + T+H LL L KR
Sbjct: 887 GVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHD---LLITALCKREDL 943
Query: 364 ----------GRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
G G P + V +AGK +A + E V + G+ VP
Sbjct: 944 TEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGL-VP 995
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/370 (20%), Positives = 171/370 (46%), Gaps = 20/370 (5%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
+++TF + K+ + + EM L+ N+ + + + + L + ++ F
Sbjct: 542 DAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIF 601
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
++ G ++ + + L + V EA + +L E + P+ Y LI G+C
Sbjct: 602 RRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQ 661
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G++ +A ++ + M +G P+I + + +++ K A K+F M K ++ + T
Sbjct: 662 GEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSV-T 720
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y +ID CK +++A+++ EM +G++ + +++++G G + +A + E+
Sbjct: 721 YSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREML 780
Query: 311 KPDISL---YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKG 367
+ + ++ LI G + + +EA+Q+F+EMI + P TY ++ H K G+
Sbjct: 781 QKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHC-KAGKME 839
Query: 368 PDPLVN---------FDTIFVGGLV----KAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
L+ DT+ L+ K G+S + E+++ +GV+ Y +
Sbjct: 840 EANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVI 899
Query: 415 HYYSNEEGVV 424
+ + E+ +V
Sbjct: 900 YAHCKEDNLV 909
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 136/297 (45%), Gaps = 14/297 (4%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRE--LKKMVNF 130
+S+T++ M+D KS N+ + EM + V +F + +E ++K +N
Sbjct: 717 DSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG-VQPHSFVYNALVHGCCKEGDMEKAMNL 775
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCD 189
F M G +L N ++ C+ + EA L ++ ++ I P+ + Y +I +C
Sbjct: 776 FREMLQKGFATTLS-FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCK 834
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK--RMDDLG 247
G + EA+ ++ M + ++ + K+ + E +F+ M K + D++
Sbjct: 835 AGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEV- 893
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
TY +VI CK + +A+ + +E+ +G+ +I L R L EA K+++
Sbjct: 894 --TYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLD 951
Query: 308 EIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL 360
E+ KP ++ + L++ + EAT+VF + G P T I L+ G+L
Sbjct: 952 EMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNL 1008
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 117/258 (45%), Gaps = 17/258 (6%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
I+P+ Y L+ G C++G + EA +W+ G P MI+ + K N+ +E
Sbjct: 508 IQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGE 567
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
K+FQ M +++ + Y +I C+ G + +A+ + ++M RGI + T SS+I+G
Sbjct: 568 KLFQEMVTMKIEQNAV-VYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHG 626
Query: 293 LLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
L G + A ++++E+ K P++ Y LI G +L + + + +EM P
Sbjct: 627 LSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPN 686
Query: 349 MHTYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVE 396
TY +++ GH L + +KG P G K GK +A K +
Sbjct: 687 KITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCD 746
Query: 397 RVMNRGVEVPRFDYNKFL 414
+ G+ + Y +
Sbjct: 747 LMSTGGISLDDITYTTLI 764
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 106/428 (24%), Positives = 177/428 (41%), Gaps = 44/428 (10%)
Query: 39 HEF---FLQICNNFPLSWRPVYLFFQYTQKA--QPCFAHNSITFNRMVDIIG---KSRNI 90
HEF FL I +N ++ R + FF + + +P A + ++ + K
Sbjct: 87 HEFDQCFLAIGSN-NVNPRTAFNFFHFASETLFEPAVAVTVVDL--LIHVYSTQFKHLGF 143
Query: 91 DLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKV 149
+ +E + + L KT L +L + E+K F IM CG + + + +
Sbjct: 144 GVVFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTM 203
Query: 150 VKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGF 208
V C V +A L K+ + + PN + Y +I G C G L EA + M E
Sbjct: 204 VNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERV 263
Query: 209 EPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKI 264
+PS+ +I K+ + DEA + +K M D G + Y +ID C+ G I
Sbjct: 264 KPSLVTYGVLINGLVKLERFDEANCI-----LKEMSDRGYAPNNVVYNTLIDGYCRIGNI 318
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISLYHG----L 320
S A + ++M GI +++T +S+I G ++ A ++EE+ + G +
Sbjct: 319 STALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSV 378
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR-------------KG 367
I L R A EM+ R +P +L+ G L + G+ KG
Sbjct: 379 IHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSG-LCQNGKQSEAIELWYRLLEKG 437
Query: 368 PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFE 427
+ GL +AG +AAK ++ ++ RG+ + YN + E V
Sbjct: 438 FAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKV---- 493
Query: 428 EVGKKLRE 435
E G KL+E
Sbjct: 494 EEGFKLKE 501
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/376 (21%), Positives = 159/376 (42%), Gaps = 30/376 (7%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMV 128
+A N++ +N ++D + NI + +M + N T + + +++
Sbjct: 298 YAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAE 357
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGY 187
+ M G + V+ LC + A I++ L KPN+ L+ G
Sbjct: 358 HLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGL 417
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C G EA ++W + ++GF + + +I + +EA K+ + M ++R L
Sbjct: 418 CQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEM-LERGLVLD 476
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
+Y +I CK GK+ + + + EEM +RGI+ D T + +++GL G++ EA +
Sbjct: 477 SISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWH 536
Query: 308 EIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
E +K PD Y +I G + R E ++F+EM+ E Y L++ +
Sbjct: 537 ECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAY---- 592
Query: 364 GRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGV 423
+ G +A + + + +RG+ Y+ +H SN V
Sbjct: 593 -------------------CENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLV 633
Query: 424 VMFEEVGKKLREVGLA 439
++ ++R+ GL+
Sbjct: 634 DSANQLLDEMRKEGLS 649
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 134/309 (43%), Gaps = 18/309 (5%)
Query: 128 VNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKG 186
+ F M G ++ N ++ LC+ + EA K+ E +KP+ + YG LI G
Sbjct: 217 IELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLING 276
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
+ EA+ I M+D G+ P+ V + +I+ + +I A+++ M +
Sbjct: 277 LVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPN 336
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
+ T +I CK ++ A +LEEM G + T +S+I+ L + R A +
Sbjct: 337 SV-TCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFI 395
Query: 307 EEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
E+ KP+ L L+ GL + + EA +++ ++++G T L+ G
Sbjct: 396 MEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEA 455
Query: 363 RGRKGPDPLVN--------FDTIFVGGLV----KAGKSLDAAKYVERVMNRGVEVPRFDY 410
++ L+ D+I L+ K GK + K E ++ RG++ + Y
Sbjct: 456 GSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTY 515
Query: 411 NKFLHYYSN 419
N LH N
Sbjct: 516 NMLLHGLCN 524
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 125/292 (42%), Gaps = 42/292 (14%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
+SI++N ++ K ++ ++ +EM RR + D T+ + L L + ++++ +
Sbjct: 476 DSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLW 535
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDV 190
H G ++ C+ V E + L ++ I+ N + YG LI+ YC+
Sbjct: 536 HECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCEN 595
Query: 191 GDLIEA-----------------------------------SKIWNLMTDEGFEPSIDVV 215
G++ EA +++ + M EG P++
Sbjct: 596 GNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCY 655
Query: 216 DKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMF 275
+I + K+ + + + Q M + + + TY I+I+ CK G + A +L EM
Sbjct: 656 TALIGGYCKLGQMHKVDSILQEMSINNVHPNKI-TYTIMINGHCKLGNMKAAAKLLNEMA 714
Query: 276 KRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISL----YHGLIKG 323
++GI D +T +++ G G++ EA KV + + ISL Y LI G
Sbjct: 715 QKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDG 766
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/395 (22%), Positives = 169/395 (42%), Gaps = 26/395 (6%)
Query: 65 KAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRE 123
KA C + + +T+N ++D GK +++ + + EM + D T+ + ++
Sbjct: 227 KAMGC-SPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGR 285
Query: 124 LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGW 182
++K ++F M G ++ + V C+ LV EA L ++ + PNE Y
Sbjct: 286 MEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTS 345
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR--- 239
L+ G C G L +A + + M +G P++ M++ K K EA V +M
Sbjct: 346 LVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGG 405
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
VK + L Y +I +A +L +M +G+E D ++I+GL ++
Sbjct: 406 VKANELL----YTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKV 461
Query: 300 REAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
EA ++ ++ +P+ +Y ++ L + + EA + +++ G +P + TY L
Sbjct: 462 DEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCAL 521
Query: 356 LQG------------HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
+ G H K G DP V T + G K G A + ++++G+
Sbjct: 522 IDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGM 581
Query: 404 EVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
+ + Y + Y + + + K+ E GL
Sbjct: 582 SLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGL 616
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 137/344 (39%), Gaps = 53/344 (15%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N V+ LC+ +VEA+ L +++ P+ + Y LI GY GDL E ++ + M
Sbjct: 204 NIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRK 263
Query: 206 EGFEPSIDVVDKMIETFFKINKDD-----------------------------------E 230
G + + +I F K + + E
Sbjct: 264 SGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQE 323
Query: 231 AMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
AMK+F MRV+ M TY ++D CK G++ A +L+EM +G+ + +T + ++
Sbjct: 324 AMKLFAQMRVRGMMPNEF-TYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMV 382
Query: 291 YGLLARGRLREAYKVVEEIEKPDIS----LYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
GL G++ EA V+ +E+ + LY LI G + A + +M +G E
Sbjct: 383 DGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGME 442
Query: 347 PTMHTYIMLLQG------------HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKY 394
+ Y L+ G L K G P T + L KAGK +A
Sbjct: 443 LDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVAL 502
Query: 395 VERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
+ ++++ G + Y + + K+RE+GL
Sbjct: 503 LHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGL 546
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 6/217 (2%)
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGY 187
+ H M CG + + ++ L + EA L+ K L +PN + Y LI G
Sbjct: 466 SLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGL 525
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C G + EA +N M + G +P++ +I+ F KI ++AM + M K M L
Sbjct: 526 CKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGM-SLD 584
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
Y +ID K+ + A+ + +M + G++ D + I G ++EA V+
Sbjct: 585 KVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLS 644
Query: 308 EI----EKPDISLYHGLIKGLLRLRRAREATQVFREM 340
E+ PD ++Y+ LI+ +L EA+ + EM
Sbjct: 645 EMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEM 681
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 105/245 (42%), Gaps = 28/245 (11%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
PN + +I C G+L+EA ++ M G P + + +I+ + K +E ++
Sbjct: 198 PNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQL 257
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
MR K + TY +I+ K G++ +AY+ EM ++G+ A+ +T S+ +
Sbjct: 258 VSEMR-KSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFC 316
Query: 295 ARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
G ++EA K+ ++ P+ Y L+ G + R +A + EM+ +G P +
Sbjct: 317 KEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVV 376
Query: 351 TYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY 410
TY T+ V GL K GK +A + + GV+ Y
Sbjct: 377 TY-----------------------TVMVDGLCKEGKVAEADNVLSLMERGGVKANELLY 413
Query: 411 NKFLH 415
+H
Sbjct: 414 TTLIH 418
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 148/368 (40%), Gaps = 29/368 (7%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
N +TF+ VD K + + +M R ++ N+ T+ + + L +
Sbjct: 304 NVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLL 363
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE--WIKPNEIAYGWLIKGYCD 189
M G ++ +V LC+ V EA +L L E +K NE+ Y LI G+
Sbjct: 364 DEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADN-VLSLMERGGVKANELLYTTLIHGHFM 422
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
+ A + N M ++G E + + +I K K DEA + +M GL
Sbjct: 423 NNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLH-----KMAGCGLR 477
Query: 250 ----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
Y ++D + K GK S+A +L ++ G + + +T ++I GL G + EA
Sbjct: 478 PNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISH 537
Query: 306 VEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG 361
++ + P++ Y LI G ++ +A + EMI +G Y L+ G++
Sbjct: 538 FNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMK 597
Query: 362 KRGRKGPDPL--------VNFD----TIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFD 409
+ + L + D T F+ G +A + ++ G+ +
Sbjct: 598 QANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTV 657
Query: 410 YNKFLHYY 417
YN + Y
Sbjct: 658 YNCLIRKY 665
>gi|15238810|ref|NP_197340.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635760|sp|Q94JX6.2|PP391_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g18390, mitochondrial; Flags: Precursor
gi|332005166|gb|AED92549.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 459
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 165/370 (44%), Gaps = 13/370 (3%)
Query: 29 SLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSR 88
SL+S +T EF ++ S FF + ++ P + S+ + + + +
Sbjct: 67 SLNSLRLPVTSEFVFRVLRATSRSSNDSLRFFNWA-RSNPSYTPTSMEYEELAKSLASHK 125
Query: 89 NIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFH-IMNDCGCEYSLEML 146
+ W+ L++M L ++ +T + + + + V F+ + GC+ ++++
Sbjct: 126 KYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVY 185
Query: 147 NKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N ++ LC K+ A LI ++ + +KP++ Y L+ G+C G + EA + + M+
Sbjct: 186 NSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSR 245
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMK-VFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
GF P D +IE + A + V +M + + D + T+ I+I+ + K G++
Sbjct: 246 RGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPD--IQTFNILIEAISKSGEV 303
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV----VEEIEKPDISLYHGL 320
M K G+ D T ++I + G++ EA+++ VE+ KP SLY +
Sbjct: 304 EFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPI 363
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVG 380
IKG+ R +A F +M + P Y ML+ + RG K D +
Sbjct: 364 IKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLIT--MCGRGGKFVDAANYLVEMTEM 421
Query: 381 GLVKAGKSLD 390
GLV + D
Sbjct: 422 GLVPISRCFD 431
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 77/181 (42%), Gaps = 18/181 (9%)
Query: 263 KISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP-----DISLY 317
K + +L++M ++ TL II G + +A ++ + K + +Y
Sbjct: 126 KYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVY 185
Query: 318 HGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG------------HLGKRGR 365
+ L+ L ++ A + R MI++G +P TY +L+ G L + R
Sbjct: 186 NSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSR 245
Query: 366 KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVM 425
+G +P + + GL+ AG L++AK + M +G VP L ++ G V
Sbjct: 246 RGFNPPARGRDLLIEGLLNAGY-LESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVE 304
Query: 426 F 426
F
Sbjct: 305 F 305
>gi|413921612|gb|AFW61544.1| hypothetical protein ZEAMMB73_526638 [Zea mays]
Length = 456
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 135/299 (45%), Gaps = 7/299 (2%)
Query: 65 KAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALMTLAEVRE 123
+A+P FA ++ F+ ++ + ++R W +M G ++ TF + + R
Sbjct: 100 RAKPSFAASAEHFDALLLPLARARLFPHLWSLASDMRGLGLPLSPTTFSAVISSYGHSRL 159
Query: 124 LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGW 182
+ V F+ + GC + E+ N ++ LC A L+ +++ + + P+ +
Sbjct: 160 PDQAVEVFNRLPRFGCPQTTEVYNALLDALCANGNFTGAYKLLRRMARKGVAPDRATFST 219
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
L+ +C G L EA + M G P + D +++ + ++A K F + K
Sbjct: 220 LVDSWCAAGKLQEAQAFLDDMAGRGLRPPVRGRDLLVDGLVRAGHLEQA-KAFALRMTKE 278
Query: 243 MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
++T+ + + +C G + A ++L + RG+ D T ++ + G++ EA
Sbjct: 279 GILPDVATFNSLAEALCNAGDVDFAVSLLADASSRGLCPDISTYKVMLPAVAKVGKIEEA 338
Query: 303 ----YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
Y VE+ +P SLY +IK L + R +A F +M +G P Y+ML++
Sbjct: 339 FRLFYAAVEDGHRPFPSLYAAIIKALCKAGRFADAFAFFGDMKTKGHPPNRPVYVMLVK 397
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 162/339 (47%), Gaps = 54/339 (15%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-------LAEVRELKKM 127
I+F+ ++ + ++ ++D ++M LV D L+ ++E E++
Sbjct: 326 ISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDK 385
Query: 128 VNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKG 186
M + GC + N ++ LC++KL+ +A L ++ E + P+ + LI G
Sbjct: 386 ------MLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHG 439
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
+C G++ +A ++ +MT + +P I + +I+ F K + ++A +++ M +++
Sbjct: 440 HCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPN 499
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEA------------------------- 281
+S Y I+++ C G +S+A+ + +EM ++GI+
Sbjct: 500 HIS-YAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFL 558
Query: 282 ----------DNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRL 327
D++T +++I G + + +A+ ++ ++E +PD+ Y+ ++ G R
Sbjct: 559 GKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQ 618
Query: 328 RRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK 366
R +EA + R+MI+RG +P TY L+ G++ + K
Sbjct: 619 GRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLK 657
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 177/414 (42%), Gaps = 56/414 (13%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEV 121
Y + A+ N T N MV+ + K ID L +M ++ + D L+ A
Sbjct: 173 YNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLIN-AYC 231
Query: 122 RE--LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEI 178
RE L + + M+ G + +L N V+ LC++ V AK + + LS + P+
Sbjct: 232 REGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTT 291
Query: 179 AYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
Y L+ C + +EA I++ M G P + +I + D+A+ F+ M
Sbjct: 292 TYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDM 351
Query: 239 RVKRM--DD--------------------------------LGLSTYRIVIDWMCKRGKI 264
+ + D+ L + Y +++ +CK+ +
Sbjct: 352 KTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLL 411
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV----VEEIEKPDISLYHGL 320
+ A + +EM +RG+ D T +++I+G G + +A + ++ KPDI Y+ L
Sbjct: 412 ADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNIL 471
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH--LG----------KRGRKGP 368
I G + +A +++ EMI R P +Y +L+ G+ LG + RKG
Sbjct: 472 IDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGI 531
Query: 369 DP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEE 421
P LV +T+ + G ++G A +++ ++++ GV YN ++ + E
Sbjct: 532 KPTLVTCNTV-IKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGE 584
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 126/284 (44%), Gaps = 8/284 (2%)
Query: 90 IDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNK 148
+DL WE E+ R + +N T I + L + ++ + F M G + N
Sbjct: 166 VDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNT 225
Query: 149 VVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEG 207
++ C+ L+ EA ++ +S + +KP Y +I G C G + A ++N M G
Sbjct: 226 LINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIG 285
Query: 208 FEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQA 267
P + ++ + N EA +F M + R L ++ +I + G + QA
Sbjct: 286 LSPDTTTYNTLLVESCRNNNFLEAKDIFSDM-LHRGVSPDLISFSSLIGVSSRNGHLDQA 344
Query: 268 YTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY----KVVEEIEKPDISLYHGLIKG 323
+M G+ DN+ + +I G G + EA K++E+ D+ Y+ ++ G
Sbjct: 345 LMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNG 404
Query: 324 LLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKG 367
L + + +A +F EM++RG P T+ L+ GH K G G
Sbjct: 405 LCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHC-KEGNMG 447
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 136/281 (48%), Gaps = 41/281 (14%)
Query: 67 QPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELK 125
Q C A + + +N +++ + K + + EM R +V D TF + + +
Sbjct: 389 QGC-ALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMG 447
Query: 126 KMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLI 184
K ++ F IM + + N ++ C+ + +A L ++ S I PN I+Y L+
Sbjct: 448 KALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILV 507
Query: 185 KGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFK---INKDDEAM--------- 232
GYC++G + EA ++W+ M +G +P++ + +I+ + + ++K DE +
Sbjct: 508 NGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVG 567
Query: 233 --------------------KVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAY 268
K F + + +M+ GL TY ++++ C++G++ +A
Sbjct: 568 PDSITYNTLINGFVKGEYMDKAFFL--INKMETKGLQPDVVTYNVILNGFCRQGRMQEAE 625
Query: 269 TMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
+L +M +RGI+ D T +++I G +++ L+EA++ +E+
Sbjct: 626 LILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEM 666
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 97/201 (48%), Gaps = 5/201 (2%)
Query: 160 VEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMI 219
VE ++ +S + + + LI+ Y L E + + ++ +GF SI+ + ++
Sbjct: 98 VEIVESLISMSSTCGVDNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLL 157
Query: 220 ETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGI 279
K+ D A +V+ + + +L + T I+++ +CK KI L +M ++GI
Sbjct: 158 GGLVKMGWVDLAWEVYNEI-ARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGI 216
Query: 280 EADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQ 335
AD +T +++I G L EA++V+ + KP + Y+ +I GL + R A
Sbjct: 217 FADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKG 276
Query: 336 VFREMIKRGCEPTMHTYIMLL 356
VF EM+ G P TY LL
Sbjct: 277 VFNEMLSIGLSPDTTTYNTLL 297
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 107/232 (46%), Gaps = 6/232 (2%)
Query: 54 RPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFK 112
+ + LF TQK + +T+N ++D K+ ++ E EM R++ N ++
Sbjct: 448 KALSLFGIMTQKN---IKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYA 504
Query: 113 IALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SE 171
I + + + + + M G + +L N V+K C+ + +A + K+ SE
Sbjct: 505 ILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISE 564
Query: 172 WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEA 231
+ P+ I Y LI G+ + +A + N M +G +P + + ++ F + + EA
Sbjct: 565 GVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEA 624
Query: 232 MKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADN 283
+ + M ++R D STY +I+ + + +A+ +EM +RG D+
Sbjct: 625 ELILRKM-IERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPDD 675
>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Vitis vinifera]
Length = 879
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/426 (23%), Positives = 174/426 (40%), Gaps = 57/426 (13%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIM 134
T+ +++ K + L EM R L VN + + + + + K V M
Sbjct: 276 TYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGM 335
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGDL 193
+CGC+ + N ++ C+ V EA L+ + L + + PN+ +Y LI YC G
Sbjct: 336 IECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGY 395
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ-MMRVKRMDDLGLSTYR 252
AS MT+ G +P + ++ + D A+ + + M+ D G+ Y
Sbjct: 396 DRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGI--YN 453
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE-EIEK 311
I++ +CK+ K+ A +L EM + + D ++++ G + G L EA K+ E IEK
Sbjct: 454 ILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEK 513
Query: 312 ---PDISLYHGLIKGLLRLRRARE-----------------------------------A 333
P I Y+ +IKG + ++ A
Sbjct: 514 GMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGA 573
Query: 334 TQVFREMIKRGCEPTMHTYIMLLQGHLGK----RGRK--------GPDPLVNFDTIFVGG 381
++FREM+K C+P + TY L+ G K R K G P V +I +G
Sbjct: 574 QKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGS 633
Query: 382 LVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADL 441
K K +DAA + E ++ +N ++ +S + G E G + +E +
Sbjct: 634 FCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFS-KNGTRAISEKGNEFQENKQSMF 692
Query: 442 ADIFQR 447
+ F R
Sbjct: 693 LNFFGR 698
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 147/344 (42%), Gaps = 28/344 (8%)
Query: 149 VVKTLCQRKLVVEAKYLIL-KLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEG 207
+VK LC+ + E + LI + + PN I Y LI GYC GD+ A+ ++ + +G
Sbjct: 210 MVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKG 269
Query: 208 FEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQA 267
F P+++ +I F K D +A+ M R + + Y +ID K G I +A
Sbjct: 270 FLPTVETYGAIINGFCK-KGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKA 328
Query: 268 YTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKG 323
+E M + G + D +T +++I G G++ EA +++E+ P+ Y LI
Sbjct: 329 VETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHA 388
Query: 324 LLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL------------GKRGRKGPDPL 371
+ A+ EM +RG +P + TY L+ G + K +G P
Sbjct: 389 YCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPD 448
Query: 372 VNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY----NKFLHYYSNEEGVVMFE 427
I + GL K K A + ++++ V F Y + F+ + +E +FE
Sbjct: 449 AGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFE 508
Query: 428 EVGKKLREVGLADLADIFQRYGK------KMATRERRRNRAIEP 465
+K G+ + + Y K MA R + R + P
Sbjct: 509 LTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAP 552
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 126/275 (45%), Gaps = 26/275 (9%)
Query: 171 EWIKPNEIAYGWLIKGYCDVGDLIEASKIWN-LMTDEGFEPSIDVVDKMIETFFKINKDD 229
E + P A +I+ Y D G + +A +++ ++ + P + + ++ K+ + +
Sbjct: 123 EEMSPTREAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIE 182
Query: 230 EAMKVF-QMMRVKRMDDLGLSTYR--IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTL 286
A K++ +M+ + D + Y I++ +CK GK+ + ++E+ + +G + +
Sbjct: 183 IARKLYDEMLEIDGAGDRCVDNYSTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFY 242
Query: 287 SSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIK 342
+++I G +G + A + E++ P + Y +I G + + ++ EM
Sbjct: 243 NTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNS 302
Query: 343 RGCEPTMHTYIMLL-----QGHLGKR----------GRKGPDPLVNFDTIFVGGLVKAGK 387
RG + Y ++ GH+ K G K PD +V ++T+ + G + GK
Sbjct: 303 RGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCK-PD-IVTYNTL-ISGSCRDGK 359
Query: 388 SLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEG 422
+A + +E+ + +G+ +F Y +H Y + G
Sbjct: 360 VSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGG 394
Score = 41.6 bits (96), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 45/244 (18%), Positives = 100/244 (40%), Gaps = 32/244 (13%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMV 128
A + T++ ++D K ++D + +EM + + N T+ + +L + +
Sbjct: 550 LAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSL 609
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQR-KLVVEAKYLILKLSEWIKPNEIAYGWLIKGY 187
F M CG ++ + ++ + C+ KL+ A + L PN++ + +L+ G+
Sbjct: 610 KIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGF 669
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
G ++++G E F+ NK + F RM G
Sbjct: 670 SKNGT--------RAISEKGNE-------------FQENKQSMFLNFF-----GRMISDG 703
Query: 248 LS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
+ Y ++ +C+ G A + +M +G D+++ ++++G+ GR +E
Sbjct: 704 WAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGRSKEWK 763
Query: 304 KVVE 307
+V
Sbjct: 764 NIVS 767
>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 711
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 138/321 (42%), Gaps = 30/321 (9%)
Query: 123 ELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYG 181
++ K N +H M G + N ++ LC+ + V A+ L+ ++ + + PN++ Y
Sbjct: 131 KIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYT 190
Query: 182 WLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK 241
+I GY +G EA+K++ MT G P I + +++ K + EA ++F M K
Sbjct: 191 SMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAK 250
Query: 242 RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
+ TY I++ G + + M GI A+ L + +I RG + E
Sbjct: 251 GHRP-NIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDE 309
Query: 302 AYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
A ++ E++ PD+ Y LI L R+ R +A F +MI G +P Y L+Q
Sbjct: 310 AMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQ 369
Query: 358 GHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFD-YNKFLHY 416
G G LVK A + V +MN G+ P +N +H
Sbjct: 370 GFCTH-----------------GDLVK------AKELVYEMMNNGIPRPNIAFFNSIVHS 406
Query: 417 YSNEEGVVMFEEVGKKLREVG 437
E V+ + ++++G
Sbjct: 407 ICKEGRVMDAHHIFDLVKDIG 427
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 142/306 (46%), Gaps = 24/306 (7%)
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWI--K 174
T ++ + K++V + +MN+ ++ N +V ++C+ V++A + I L + I +
Sbjct: 373 THGDLVKAKELV--YEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHH-IFDLVKDIGER 429
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
+ I + LI GYC VG++ +A + + M G P + ++ +FK + D+ + +
Sbjct: 430 SDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNL 489
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
F+ M K++ + TY I++D + + G+ A ML EM G T + I+ GL
Sbjct: 490 FREMSDKKIKPTTV-TYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLC 548
Query: 295 ARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
EA + +++ K +I+ + +I + ++R EA +F + G P
Sbjct: 549 RNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNAS 608
Query: 351 TYIMLLQGHLGKRG-------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVER 397
TY ++++ +L K G + G P + L++ G+ + A Y+ +
Sbjct: 609 TYGIMIR-NLLKEGSVEEADNMFSSMEKSGCAPCSRLLNDTIRTLLEKGEIVKAGNYMSK 667
Query: 398 VMNRGV 403
V + +
Sbjct: 668 VDGKSI 673
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 123/317 (38%), Gaps = 63/317 (19%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILK 168
T+ + + R + + FF + G + N V+K LC K +A K L+ +
Sbjct: 10 TYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKVLLRR 69
Query: 169 LSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINK 227
++E P+ +Y ++K CD +A + +M E S DVV
Sbjct: 70 MTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVV------------ 117
Query: 228 DDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLS 287
TY VI K GKI +A + EM ++G D +T +
Sbjct: 118 ----------------------TYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHN 155
Query: 288 SIIYGLLARGRLREA----YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
SII L + A ++V+ P+ Y +I G L R EAT++FREM R
Sbjct: 156 SIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGR 215
Query: 344 GCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
G P +V++++ F+ L K G+S +AA+ + +G
Sbjct: 216 GLIP----------------------DIVSWNS-FMDSLCKHGRSKEAAEIFYSMAAKGH 252
Query: 404 EVPRFDYNKFLHYYSNE 420
Y LH Y+ E
Sbjct: 253 RPNIVTYGILLHGYATE 269
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 67/168 (39%), Gaps = 2/168 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
++ T+N +V+ KS ID +EM +++ T+ I L L
Sbjct: 466 DTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKML 525
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDV 190
H M CG SL N ++K LC+ EA + KL +K N +I V
Sbjct: 526 HEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTV 585
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
EA +++ ++D G P+ MI K +EA +F M
Sbjct: 586 QRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSM 633
>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
Length = 696
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 141/295 (47%), Gaps = 9/295 (3%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
N +T N ++D + K + +D LQ+M ++ N T+ + + + V
Sbjct: 286 NVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRIL 345
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
M+ G ++ + ++ LC+ L EA+ + + KPN YG L+ GY
Sbjct: 346 KEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATE 405
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR-MDDLGLS 249
G+L++ + + +LM G P V + I + K + DEA F M+ + M D +
Sbjct: 406 GNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPD--IV 463
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA----YKV 305
Y VID +CK G++ A + +M G+ D +T +++I+G G+ +A Y++
Sbjct: 464 AYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEM 523
Query: 306 VEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL 360
++ P+++ ++ +I L + + EA ++F M + G +P + +Y ++ G+
Sbjct: 524 MDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYF 578
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 137/322 (42%), Gaps = 20/322 (6%)
Query: 123 ELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYG 181
++ K F M D G ++ N V+ LC+ + + +A+ ++ ++ E I PN Y
Sbjct: 267 DVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYN 326
Query: 182 WLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK 241
LI GY G EA +I M+ +G P++ +I+ K EA ++F M ++
Sbjct: 327 SLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSM-IQ 385
Query: 242 RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
STY ++ G + + + M + G+ + IY GRL E
Sbjct: 386 SGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDE 445
Query: 302 AYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
A ++++ PDI Y +I GL ++ R +A F +MI G P + T+ L+
Sbjct: 446 ASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIH 505
Query: 358 GHL--GKRGR----------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEV 405
G GK + +G P VN + L K GK +A K + + G +
Sbjct: 506 GFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKP 565
Query: 406 PRFDYNKFLHYY--SNEEGVVM 425
YN +H Y + E G VM
Sbjct: 566 NVVSYNTMIHGYFIAGEVGEVM 587
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 131/283 (46%), Gaps = 14/283 (4%)
Query: 73 NSITFNRMVDIIGKS----RNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMV 128
N +T++ ++D + KS ++F +Q G++ N T+ L A L M
Sbjct: 356 NVVTYSMLIDCLCKSGLHAEAREIFNSMIQS-GQKP--NASTYGSLLHGYATEGNLVDMN 412
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGY 187
N +M G + N + C+ + EA K+ + P+ +AY +I G
Sbjct: 413 NVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGL 472
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C +G L +A + M D+G P I + +I F K ++A ++F M + R
Sbjct: 473 CKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEM-MDRGIPPN 531
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
++T+ +ID + K GK+++A + + M + G + + ++ +++I+G G + E K+++
Sbjct: 532 VNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLD 591
Query: 308 EI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
++ KP ++ L+ G++ + + + +I CE
Sbjct: 592 DMLLIGLKPTAVTFNTLLDGMVSMGLKPDVVTC-KTLIDSCCE 633
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 96/233 (41%), Gaps = 42/233 (18%)
Query: 74 SITFNRM------VDIIGKSRNIDLFWETLQEMGRR--------RLVNDK------TFKI 113
S+TFN+M DI+ + ID L ++GR ++++D TF
Sbjct: 447 SLTFNKMQQQGFMPDIVAYTTVID----GLCKIGRLDDAMSRFCQMIDDGLSPDIITFNT 502
Query: 114 ALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEW 172
+ A + +K F+ M D G ++ N ++ L + V EA+ L L
Sbjct: 503 LIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAG 562
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
KPN ++Y +I GY G++ E K+ + M G +P+ + +++ + + +
Sbjct: 563 AKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKPDVV 622
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
T + +ID C+ G+I T+ EM + + D +T
Sbjct: 623 -----------------TCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTIT 658
>gi|449480434|ref|XP_004155892.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18950-like [Cucumis sativus]
Length = 638
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 115/216 (53%), Gaps = 6/216 (2%)
Query: 148 KVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDE 206
+++ C+ + ++A + L + P+ + Y LI G+C +G L +ASK+W M D+
Sbjct: 338 EIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDK 397
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQ 266
GF P+ + +I F KI DEAMK+++ M + LS +++ +C G+ +
Sbjct: 398 GFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILG-LCLHGRTDE 456
Query: 267 AYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIK 322
AY EM + I D +T +++I G G++ ++ +++E++ +P S Y LI+
Sbjct: 457 AYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQ 516
Query: 323 GLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
L +L +EA +++ +M RG +P + T ++ G
Sbjct: 517 KLCQLGSVQEAKEMWNDMHNRGLQPMVCTRDHIISG 552
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/348 (20%), Positives = 156/348 (44%), Gaps = 27/348 (7%)
Query: 91 DLFW---ETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLN 147
DL W E + E G ++ V+ +T + ++ + + G + N
Sbjct: 243 DLIWKLYEGMMETGVQKDVDIETVGYLIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFN 302
Query: 148 KVVKTLCQRK---LVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
K++ C+ K V+E + ++ + P+ Y +I G+C ++A +++N +
Sbjct: 303 KLISGFCKEKNHHRVLELVHTMIVKNR--NPDIFTYQEIINGFCKNWMTLQAFEVFNALK 360
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKV-FQMMRVKRMDDLGLSTYRIVIDWMCKRGK 263
D G+ P + + +I F K+ + ++A K+ F+M+ + + +Y +I CK G
Sbjct: 361 DRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPN--EYSYNTLIYGFCKIGN 418
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP----DISLYHG 319
+ +A + ++M G + L+ +++I GL GR EAY E+ D+ Y+
Sbjct: 419 LDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNIVCDVITYNT 478
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG--HLGK----------RGRKG 367
LI+G R + ++T + +E+ +G +P+ +Y L+Q LG +G
Sbjct: 479 LIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEAKEMWNDMHNRG 538
Query: 368 PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
P+V + GL + G ++ +++ ++ ++ + + K +
Sbjct: 539 LQPMVCTRDHIISGLCEQGYVVEGMEWLITMLKSNLKPQKETFYKLIQ 586
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 109/274 (39%), Gaps = 30/274 (10%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDE 206
NK+ L + K V AK + P + I+ C+ G + EA ++++ +
Sbjct: 163 NKLFDALLEAKACVPAKSFLYSFE--FSPEPASLENYIRCVCEGGLVEEAVYTFDMLKEA 220
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQ-MMRVKRMDDLGLSTYRIVIDWMCKRGKIS 265
G+ P ++ + ++ K + D K+++ MM D+ + T +I C K+S
Sbjct: 221 GYRPYVETWNFAFQSCLKFGRTDLIWKLYEGMMETGVQKDVDIETVGYLIQAFCNDNKVS 280
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLI 321
+AY +L + + G+ N + +I G ++V + PDI Y +I
Sbjct: 281 RAYEILRQSLEDGLTPCNDAFNKLISGFCKEKNHHRVLELVHTMIVKNRNPDIFTYQEII 340
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGG 381
G + +A +VF + RG P M Y T + G
Sbjct: 341 NGFCKNWMTLQAFEVFNALKDRGYAPDMVMY-----------------------TTLIHG 377
Query: 382 LVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
K G+ DA+K ++++G + YN ++
Sbjct: 378 FCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIY 411
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 164/349 (46%), Gaps = 19/349 (5%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
N++ +N ++D + ++ E L+ M + T+ I + +L+ R++ K+ F
Sbjct: 211 NALCYNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALF 270
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQR-KLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDV 190
+ M + + V+ C+ + AK L + ++PNE YG LI G+C +
Sbjct: 271 NEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKI 330
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G + A + M +G + + + MI+ + + D+A+K+ M K +L + T
Sbjct: 331 GQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAME-KMGVELDIYT 389
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y + +C+ ++ +A T+L M + G+ + +T +++I G + EA ++ E+
Sbjct: 390 YNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMA 449
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL--GK-- 362
+ P + Y+ +I G + REA + +EM K+G P ++TY L+ GH GK
Sbjct: 450 EKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVD 509
Query: 363 --------RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
++G +P V T + GL K G+S A + + ++ G+
Sbjct: 510 VALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGL 558
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 107/238 (44%), Gaps = 42/238 (17%)
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGD 192
M G E + N + LC+ + EAK L+ + E + PN + Y LI +C GD
Sbjct: 378 MEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGD 437
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
++EA +++ M ++G PS+ TY
Sbjct: 438 MVEARRLFREMAEKGATPSV------------------------------------VTYN 461
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK- 311
++ID K+G I +A +EM K+G D T +S+++G G++ A K+ EE+++
Sbjct: 462 VMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQR 521
Query: 312 ---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK 366
P++ Y LI GL + R+ A Q++ +M+K G P Y L+ G L RK
Sbjct: 522 GTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALV-GSLHTDNRK 578
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 47/242 (19%), Positives = 100/242 (41%), Gaps = 28/242 (11%)
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
+ +A ++ G C G + +A ++ + M G + + +++ + + D ++
Sbjct: 176 SPLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEIL 235
Query: 236 QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
++M + ++ + TY I++D + IS+ + EM + D +++I
Sbjct: 236 EIMENEGIEAT-VGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCR 294
Query: 296 RGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
G +R A KV++E +P+ Y LI G ++ + A + +M +G
Sbjct: 295 AGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQG------- 347
Query: 352 YIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
+ L Q + F+T+ + G + G DA K + GVE+ + YN
Sbjct: 348 -VGLNQ--------------IIFNTM-IDGYCRKGMVDDALKIKAAMEKMGVELDIYTYN 391
Query: 412 KF 413
Sbjct: 392 TL 393
>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Brachypodium distachyon]
Length = 692
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 138/295 (46%), Gaps = 15/295 (5%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEV-RELKKMVNFF 131
N +T+ +VD + K + + + M R + ++ L+ V + ++ ++
Sbjct: 368 NVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLL 427
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDV 190
M D G E + + ++ LC + + EAK L+ K+ E +KPN + Y ++
Sbjct: 428 SEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKA 487
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL-- 248
EA + M D GF P+I +++ K DEA+ F +M DLGL
Sbjct: 488 RKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFN-----KMVDLGLEP 542
Query: 249 --STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY--- 303
Y ++D +CK G++ +A +L+EM +G+ DN+ +S++ G L +G L++A+
Sbjct: 543 NVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALK 602
Query: 304 -KVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
K++ + D+ Y + G L +EA +V EMI+ G P Y L+
Sbjct: 603 AKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLIN 657
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 160/372 (43%), Gaps = 29/372 (7%)
Query: 51 LSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK- 109
L+WR LF Q A N TFN M+D + K ++ L M D
Sbjct: 181 LAWR---LFEQLP-------APNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVV 230
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILK 168
T+ + + EL+++ M CGC + N +V C+ + A Y
Sbjct: 231 TYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEM 290
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
E + N + + + +C G + EA K++ M +G +P+ +++ K +
Sbjct: 291 KREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRL 350
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
D+A+ + M V++ L + TY +++D +CK GK+++A + M + GI A+ L ++
Sbjct: 351 DDALVLTNEM-VQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTT 409
Query: 289 IIYGLLARGRLREAYKVVEEIEKP----DISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+I+G A ++ E++ D+SLY LI GL L++ EA + +M + G
Sbjct: 410 LIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECG 469
Query: 345 CEPTMHTYIMLLQGHLGKRGR------------KGPDPLVNFDTIFVGGLVKAGKSLDAA 392
+P Y ++ R G P + V GL KAG +A
Sbjct: 470 LKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAI 529
Query: 393 KYVERVMNRGVE 404
+ ++++ G+E
Sbjct: 530 SHFNKMVDLGLE 541
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 182/427 (42%), Gaps = 58/427 (13%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEM---GRRRLVNDKTFKIALMTLAEVRELKKMVNFF 131
+T+N ++D GK ++ + + EM G R V T+ + + +++ ++F
Sbjct: 230 VTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDV--VTYNALVNCFCKFGRMERAYSYF 287
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDV 190
M G ++ + V C+ +V EA L ++ + +KPNE+ Y L+ G C
Sbjct: 288 AEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKA 347
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR----------- 239
G L +A + N M +G ++ +++ K K EA VF++M
Sbjct: 348 GRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLY 407
Query: 240 -------------------VKRMDDLGL----STYRIVIDWMCKRGKISQAYTMLEEMFK 276
+ M D G+ S Y +I +C K+ +A ++L +M +
Sbjct: 408 TTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDE 467
Query: 277 RGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRARE 332
G++ +N+ ++I+ + EA +++++ +P+I Y L+ GL + E
Sbjct: 468 CGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDE 527
Query: 333 ATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGP---------DPLVNFD----TIFV 379
A F +M+ G EP + Y L+ G L K GR D ++ D T +
Sbjct: 528 AISHFNKMVDLGLEPNVQAYTALVDG-LCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLM 586
Query: 380 GGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLA 439
G +K G DA +++N G+++ + Y F+ + N + EV ++ E G+
Sbjct: 587 DGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGIT 646
Query: 440 DLADIFQ 446
A ++
Sbjct: 647 PDAVVYN 653
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 89/208 (42%), Gaps = 22/208 (10%)
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
T+ I+ID++CK G +++A +L M G D +T +S+I G G L E K+V E+
Sbjct: 196 TFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEM 255
Query: 310 E----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRG---------------CEPTMH 350
+PD+ Y+ L+ + R A F EM + G C+ M
Sbjct: 256 RGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMV 315
Query: 351 TYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY 410
M L + +G K P+ + T V G KAG+ DA ++ +GV + Y
Sbjct: 316 REAMKLFAQMRMKGMK-PNEVTY--TCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTY 372
Query: 411 NKFLHYYSNEEGVVMFEEVGKKLREVGL 438
+ E V E+V + + G+
Sbjct: 373 TVLVDGLCKEGKVAEAEDVFRLMERAGI 400
>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
Length = 801
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 143/314 (45%), Gaps = 30/314 (9%)
Query: 76 TFNRMVDIIGKSRNID---LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
T+ ++D K+ I+ +E ++ +G V T+ + + +++ + + FH
Sbjct: 325 TYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTV--VTYTALIHAYLKAKQVPQANDIFH 382
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-----------------SEWIKP 175
M D GC + +V LC+ + +A + KL + P
Sbjct: 383 RMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAP 442
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
N + YG L+ G C + A ++ + M G EP+ V D +I+ F K K D A +VF
Sbjct: 443 NVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 502
Query: 236 -QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
QM + + + TY +ID M K G++ A +L +M K + +T +++I GL
Sbjct: 503 LQMTKCGYLPS--VHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLC 560
Query: 295 ARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
G +A K++ +E+ P++ Y LI GL + + + +F +M ++GC P
Sbjct: 561 RIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYV 620
Query: 351 TYIMLLQGHLGKRG 364
TY +L+ HL G
Sbjct: 621 TYRVLIN-HLCAAG 633
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 153/354 (43%), Gaps = 39/354 (11%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFF 131
N F R + +GK D ++ ++EM R+ V D T+ + L +++K F
Sbjct: 255 NVANFARCLCGVGK---FDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLF 311
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
M G + ++ + C+ L+ +A++L ++ S P + Y LI Y
Sbjct: 312 QEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKA 371
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDL--- 246
+ +A+ I++ M D G P+ +++ K +A +V+ +++ D
Sbjct: 372 KQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFY 431
Query: 247 -----------GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
+ TY ++D +CK K+ A+ +L+ M G E +++ ++I G
Sbjct: 432 FPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCK 491
Query: 296 RGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
G++ A +V ++ K P + Y LI + + R A +V +M+K C P + T
Sbjct: 492 AGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVT 551
Query: 352 YIMLLQG--HLGKRGR----------KGPDPLVNFDTIFVGGLVKAGK---SLD 390
Y ++ G +G+ + KG P V T + GL KAGK SLD
Sbjct: 552 YTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLD 605
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 141/337 (41%), Gaps = 47/337 (13%)
Query: 68 PC-----FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEV 121
PC A N +T+ +VD + K+ +D E L M + AL+ +
Sbjct: 433 PCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKA 492
Query: 122 RELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQR-KLVVEAKYLILKLSEWIKPNEIAY 180
++ F M CG S+ ++ + + +L + K L L + PN + Y
Sbjct: 493 GKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTY 552
Query: 181 GWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
+I G C +G+ +A K+ +LM ++G P++ +I+ K K D ++ +F M
Sbjct: 553 TAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSR 612
Query: 241 KRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEM------------------FKRGIEAD 282
K TYR++I+ +C G + +A +L EM F + A
Sbjct: 613 KGCSP-NYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIAS 671
Query: 283 NLTLSSI----------IYGLL-----ARGRLREAYKVVEEIE------KPDISLYHGLI 321
L + +YG+L GRL A ++ +E+ K D +Y LI
Sbjct: 672 LGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLI 731
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+ L + EA +++ EM +RG P + ++ L++G
Sbjct: 732 QALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKG 768
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 135/334 (40%), Gaps = 49/334 (14%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK----TFKIALMT----------- 117
+ +T+N +V ++ + +DL + +EM D+ F AL
Sbjct: 39 SKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDMI 98
Query: 118 ------------------LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLV 159
L E + ++F H M C ++ ++ ++K +
Sbjct: 99 EREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQL 158
Query: 160 VEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKM 218
K +I + ++E PN + L+ YC+ D A K+ N MT G P V +
Sbjct: 159 GWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIF 218
Query: 219 IETFFKINK------DDEAMKVFQMMRVKR--MDDLGLSTYRIVIDWMCKRGKISQAYTM 270
I + K D A K++ M ++ + ++ + +C GK +A+ +
Sbjct: 219 IGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFA---RCLCGVGKFDKAFQL 275
Query: 271 LEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLR 326
++EM ++G D T S +I L ++ +A+ + +E++ PD+ Y LI +
Sbjct: 276 IKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCK 335
Query: 327 LRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL 360
+A +F EM GC PT+ TY L+ +L
Sbjct: 336 AGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYL 369
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 130/315 (41%), Gaps = 19/315 (6%)
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-------LSEWIKPNEIAYGWLIKG 186
M CGC + N + ++C ++ + L L L+ N++ +
Sbjct: 203 MTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARC 262
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
C VG +A ++ M +GF P K+I K ++A +FQ M++ +
Sbjct: 263 LCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTP- 321
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA---- 302
+ TY I+ID CK G I QA + EEM G +T +++I+ L ++ +A
Sbjct: 322 DVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIF 381
Query: 303 YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
+++V+ +P+ Y L+ GL + +A +V+ ++I Y
Sbjct: 382 HRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPC------- 434
Query: 363 RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEG 422
R P V V GL KA K A + ++ +++ G E Y+ + +
Sbjct: 435 EDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGK 494
Query: 423 VVMFEEVGKKLREVG 437
+ +EV ++ + G
Sbjct: 495 IDSAQEVFLQMTKCG 509
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 133/332 (40%), Gaps = 60/332 (18%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
N +T+ +VD + K+ NI +E ++ D F +F
Sbjct: 392 NDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDF------------------YFP 433
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVG 191
+ ++ +V LC+ V A L+ LS +PN I Y LI G+C G
Sbjct: 434 CEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAG 493
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMR----------- 239
+ A +++ MT G+ PS+ +I+ FK + D AMKV QM++
Sbjct: 494 KIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYT 553
Query: 240 ------------------VKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKR 277
+ M++ G S TY +ID + K GKI + + +M ++
Sbjct: 554 AMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRK 613
Query: 278 GIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK---PD-ISLYHGLIKGLLRLRRAREA 333
G + +T +I L A G L +A ++ E+++ P + Y I+G + A +
Sbjct: 614 GCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIA--S 671
Query: 334 TQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
+ EM G P Y ML+ K GR
Sbjct: 672 LGILEEMESYGTVPIAPVYGMLIDC-FSKAGR 702
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 124/284 (43%), Gaps = 25/284 (8%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHIM 134
T+ ++D + K +DL + L +M + N T+ + L + E +K + +M
Sbjct: 516 TYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLM 575
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDL 193
+ GC ++ ++ L + + + L ++S + PN + Y LI C G L
Sbjct: 576 EEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLL 635
Query: 194 IEASKIWNLMTD-------EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
+A + M +G+ +I K I ++ E+ + V
Sbjct: 636 DKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPV------ 689
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFK--RGIEADNLTLSSIIYGLLARGRLREAYK 304
Y ++ID K G++ A + +EM + ++ DN +S+I L ++ EA++
Sbjct: 690 ----YGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFR 745
Query: 305 VVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+ E+ + P++S++ LIKGL+ +++ EA Q+ + G
Sbjct: 746 LYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEG 789
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 1/115 (0%)
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE-E 308
TY ++ + G++ + + +EM + G D T+ + L GR +A ++E E
Sbjct: 42 TYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDMIERE 101
Query: 309 IEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
K D L +I GL+ EA M C P + TY LL G L K+
Sbjct: 102 DFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKK 156
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 32/169 (18%), Positives = 68/169 (40%), Gaps = 16/169 (9%)
Query: 203 MTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDW----M 258
+ D G+ PS + +++ + D +V K M + G R + +
Sbjct: 31 LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRV-----QKEMSESGFCMDRFTVGCFAHAL 85
Query: 259 CKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDI 314
CK G+ + A M+E + + D + + +I GL+ EA + + P++
Sbjct: 86 CKEGRWADALDMIE---REDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNV 142
Query: 315 SLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
Y L+ G L+ ++ ++ M+ GC P + L+ + ++
Sbjct: 143 VTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEK 191
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 146/298 (48%), Gaps = 8/298 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N +T++ ++D + + R ++ + M + + D T+ + L + K+
Sbjct: 232 NMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALL 291
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDV 190
+ M + N +V T C+ V EA ++ ++E ++PN + Y L+ GY
Sbjct: 292 NEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLW 351
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
D++EA K++++M +G +P+I + +I + K + DEAM++F M + + +S
Sbjct: 352 TDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVS- 410
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y +I C+ GK+ +A + M G D T S ++ G +G L +A+++ ++
Sbjct: 411 YNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQ 470
Query: 311 ----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
KP++ +Y L+ + + ++A ++F E+ +G +P + Y ++ G L K G
Sbjct: 471 STYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIING-LCKEG 527
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 131/279 (46%), Gaps = 13/279 (4%)
Query: 75 ITFNRMVDII---GKSRNIDLFWETLQEMG-RRRLVNDKTFKIALMTLAEVRELKKMVNF 130
+TFN +VD GK +T+ EMG +V + +V E +K+
Sbjct: 304 VTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKL--- 360
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCD 189
FH+M GC+ ++ N ++ C+ K + EA L ++ + + PN ++Y LI G+C
Sbjct: 361 FHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQ 420
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
+G L EA ++ M G P + +++ F K +A ++F+ M+ + L
Sbjct: 421 LGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKP-NLV 479
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
Y I++ MCK G A + E+F +G++ ++II GL G L EA + +
Sbjct: 480 MYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNM 539
Query: 310 EK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
E PD Y+ +I+GLL+ + A + EM RG
Sbjct: 540 EADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRG 578
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 122/265 (46%), Gaps = 25/265 (9%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
++P + + LI G C VG+ +A ++++ M +G +P + + +I KI + A
Sbjct: 159 LQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAA 218
Query: 233 KVFQMMRVKRMDDLG----LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
+ +K+M++ G + TY +ID +C+ +++A + M +GI D T +S
Sbjct: 219 GL-----LKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTS 273
Query: 289 IIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+I GL R +EA ++ E+ PDI ++ L+ + + EA V + M + G
Sbjct: 274 LIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMG 333
Query: 345 CEPTMHTYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAA 392
EP + TY L+ G+ KG P + I + G KA + +A
Sbjct: 334 VEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAM 393
Query: 393 KYVERVMNRGVEVPRFDYNKFLHYY 417
+ ++++G+ YN +H +
Sbjct: 394 QLFNEMIHQGLTPNNVSYNTLIHGF 418
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 53/104 (50%), Gaps = 8/104 (7%)
Query: 263 KISQAYTMLEEMFKR----GIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDI 314
K+ Q Y ++ + K+ G+ + TLS + R+ + V+ ++ K P I
Sbjct: 104 KMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTI 163
Query: 315 SLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+ LI GL ++ +A ++F +M+ +GC+P ++TY ++ G
Sbjct: 164 VTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIING 207
>gi|410109899|gb|AFV61029.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
micrantha]
Length = 431
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 138/288 (47%), Gaps = 41/288 (14%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T + L L +++ K + F+ + +CG SL N ++ C+ + A+ + +
Sbjct: 109 TCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAI 168
Query: 170 SEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++W ++P+ ++Y L+ GY +GDL E ++ + M G +P + +I K +K
Sbjct: 169 TKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKM 228
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
D A ++F M VK + G+ T+ +ID CK G++ A + ++M + + D +T ++
Sbjct: 229 DGANELFDEMLVKGLVPNGV-TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNT 287
Query: 289 IIYGLLARGRLREAYKVVEEIE----KPD------------------------------- 313
+IYGL +G L++A+ +++E+ KPD
Sbjct: 288 LIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQEN 347
Query: 314 ISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
I L Y LI GL + R+ +A ++ REM+ G +P TY M++
Sbjct: 348 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIIN 395
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 93/222 (41%), Gaps = 38/222 (17%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
N +TF ++D K+ +DL E ++M + L+ D
Sbjct: 246 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPD------------------------ 281
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVG 191
L N ++ LC++ + +A LI ++S + +KP++ Y LI G C G
Sbjct: 282 ----------LITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEG 331
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLST 250
DL A + M E +I + + +A K+ +M+ V D G T
Sbjct: 332 DLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTG--T 389
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
Y ++I+ CK+G + + +L+EM + G +T + ++ G
Sbjct: 390 YTMIINEFCKKGDVWKGSKLLKEMHRDGHAPSVVTYNVLMNG 431
>gi|255660852|gb|ACU25595.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 140/303 (46%), Gaps = 41/303 (13%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T + L L E R K + +F+ + +CG SL N +++ C+ + A+ + +
Sbjct: 103 TCRKVLEHLMEFRYFKLVWDFYKEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAI 162
Query: 170 SEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++W ++P+ +++ LI GY +GDL E ++ + M G +P + +I K K
Sbjct: 163 TKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKL 222
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
DEA ++F M + G+ T+ +I CK K+ A + ++M +G+ D +T ++
Sbjct: 223 DEANELFNEMLDNGLVPNGV-TFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNT 281
Query: 289 IIYGLLARGRLREAYKVVEEI----EKPD------------------ISL---------- 316
+IYGL +G L++ + +++E+ KPD I+L
Sbjct: 282 LIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQES 341
Query: 317 -------YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPD 369
Y LI L R RA +A ++ REM+ G +P TY M++ KR K
Sbjct: 342 IRLDDVAYTALISCLCREGRASDAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTAS 401
Query: 370 PLV 372
L+
Sbjct: 402 KLL 404
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/315 (19%), Positives = 130/315 (41%), Gaps = 48/315 (15%)
Query: 141 YSLEMLNKVVKTLCQRKLVVEAKYL-------------------ILKLSEWIKPNEIAYG 181
++L ++ LC ++++EAK L IL+ + + +
Sbjct: 11 HTLHSYCTMIHLLCTHQMLIEAKSLIQVVVSRKGKDSASDVFEAILETKGTQRSDFYVFS 70
Query: 182 WLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIET-----FFKINKDDEAMKVFQ 236
L+ Y + G + +A + + L D K++E +FK+ D F
Sbjct: 71 GLMIAYLESGFVRDAVQCFRLTKQHKIRVPFDTCRKVLEHLMEFRYFKLVWD------FY 124
Query: 237 MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR 296
++ L + I++ CK G++ A ++ + + K G+ ++ +++I G +
Sbjct: 125 KEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKL 184
Query: 297 GRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
G L E +++ + +PD+ Y LI GL + + EA ++F EM+ G P T+
Sbjct: 185 GDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTF 244
Query: 353 IMLLQGHLGKRG------------RKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVM 399
L+ GH +G P L+ ++T+ + GL K G+ ++ ++
Sbjct: 245 TTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTL-IYGLCKKGELKQVHDLIDEMI 303
Query: 400 NRGVEVPRFDYNKFL 414
G++ + Y +
Sbjct: 304 MNGLKPDKISYTTLI 318
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 6/205 (2%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK- 168
T+ I + L + +L + F+ M D G + ++ C+ + V A + +
Sbjct: 208 TYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQM 267
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
LS+ + P+ I Y LI G C G+L + + + M G +P +I+ K
Sbjct: 268 LSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDL 327
Query: 229 DEAMKVFQMM--RVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTL 286
+ A+++ M R+DD+ Y +I +C+ G+ S A ML EM G++ DN T
Sbjct: 328 EIALELRNKMIQESIRLDDVA---YTALISCLCREGRASDAEKMLREMLSVGLKPDNGTY 384
Query: 287 SSIIYGLLARGRLREAYKVVEEIEK 311
+ II + + A K++ E+++
Sbjct: 385 TMIINEFCKKRDSKTASKLLREMQR 409
>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 665
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 125/276 (45%), Gaps = 28/276 (10%)
Query: 167 LKLSEWIK-------PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMI 219
L L+ W K PN + L+KGY G ++EA IWN M +EGFEP++ + +I
Sbjct: 302 LALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLI 361
Query: 220 ETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGI 279
K EA+ V M + +STY +ID K G + A + +M G
Sbjct: 362 HGLCSHGKMGEAVSVSSKME-RNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGC 420
Query: 280 EADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQ 335
+ + +S++ L +A+ ++E++ P+ ++ IKGL R A
Sbjct: 421 IPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAIN 480
Query: 336 VFREMIKRGCEPTMHTYIMLLQGHLGKRGR-------------KGPD-PLVNFDTIFVGG 381
+F +M + GC P + TY +L G L K R KG + LV ++TIF GG
Sbjct: 481 LFCQMEQYGCSPNIKTYNEVLDGLL-KENRIKEALELVTEMEEKGMELNLVTYNTIF-GG 538
Query: 382 LVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
GK +A K + +++ GV+ YN + Y
Sbjct: 539 FCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAY 574
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 164/352 (46%), Gaps = 26/352 (7%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMV 128
F H +T+ M++ +G+ ++D LQ+M + ++ F + T V ++ +
Sbjct: 75 FQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQAL 134
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQ--RKLVVEAKYLILKLSEWIKPNEIAYGWLIKG 186
F+ + + GC+ ++++ N ++ + R ++E Y +K + +PN Y L+K
Sbjct: 135 KMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMK-RDGKEPNVYTYNILLKA 193
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
C + A K+ M+++G EP + +I + K+ K +EA ++ +R +
Sbjct: 194 LCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEAREL--SIRFQP---- 247
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
+S Y +I+ C+ K+ + + +L +M ++GI+ + +T S++I L G + A V
Sbjct: 248 NVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVW 307
Query: 307 EEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG--HL 360
++ P++ + L+KG R EA ++ M + G EP + Y L+ G
Sbjct: 308 AKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSH 367
Query: 361 GKRG----------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
GK G R G P V+ + G KAG + A++ ++M G
Sbjct: 368 GKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNG 419
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 145/327 (44%), Gaps = 10/327 (3%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAE 120
+ + A+ F N + +N ++ + + +M R N T+ + A+
Sbjct: 342 WNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAK 401
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIA 179
+L ++ M GC ++ + +V LC+ + +A LI K+S + PN +
Sbjct: 402 AGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVT 461
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
+ IKG C G + A ++ M G P+I +++++ K N+ EA+++ M
Sbjct: 462 FNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEME 521
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
K M+ L L TY + C GK +A +L +M G++ D +T +++ Y +G++
Sbjct: 522 EKGME-LNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKV 580
Query: 300 REAYKVVEEIEK-----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIM 354
+ A ++++++ P+++ Y L+ G+ EA +M+ G T+
Sbjct: 581 KTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNA 640
Query: 355 LLQGHLGKRGRKGPDPLVNFDTIFVGG 381
L++G G GP + D I G
Sbjct: 641 LVRGLFNSLGHLGPIHI--LDDILTSG 665
>gi|296084463|emb|CBI25022.3| unnamed protein product [Vitis vinifera]
Length = 927
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 140/294 (47%), Gaps = 7/294 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGR-RRLVNDKTFKIALMTLAEVRELKKMVNFFHI 133
+ +N ++ N+D T++EM + R +TF + A ++++ + F +
Sbjct: 514 VLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDM 573
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGD 192
M GC ++ N ++ L ++ + +A ++ ++S I PNE Y ++ GY +GD
Sbjct: 574 MRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGD 633
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+A + + + EG E + + +++ K + A+ V + M +++ Y
Sbjct: 634 TGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTF-VYN 692
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
I+ID +RG + +A ++++M + G++ D T +S I G ++ A K ++E+E
Sbjct: 693 ILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVV 752
Query: 311 --KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
KP+I Y LI G R +A + F+EM G +P Y L+ L +
Sbjct: 753 GVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLMTSLLSR 806
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 88/426 (20%), Positives = 166/426 (38%), Gaps = 60/426 (14%)
Query: 42 FLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMG 101
F ++ P +W+ V F+ +K + F MV + ++ T + M
Sbjct: 242 FRKVLETEPENWQAVVQAFERIKKP------SRKEFGLMVTYYARRGDMHHARGTFESMR 295
Query: 102 RRRLVNDKTFKIALMTLAEV-RELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVV 160
R + +L+ V R++++ ++ M + G E SL + +V +
Sbjct: 296 ARGIEPTSHVYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAE 355
Query: 161 EAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKM- 218
A + + E N I YG +I +C ++ +A + M +EG + ID+ M
Sbjct: 356 AADHWFKEAKERHTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMM 415
Query: 219 ----------------------------------IETFFKINKDDEAMKVFQMMRVKRMD 244
I + KI K +A++V +MM V +
Sbjct: 416 DGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIK 475
Query: 245 DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK 304
+ TY ++I+ + + A+ + E++ K G++ D + ++II G + A +
Sbjct: 476 H-NMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIR 534
Query: 305 VVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH- 359
V+E++K P + +I G R R A ++F M GC PT+HT+ L+ G
Sbjct: 535 TVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLV 594
Query: 360 -----------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRF 408
L + G P + T + G G + A +Y ++ G+E+ +
Sbjct: 595 EKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVY 654
Query: 409 DYNKFL 414
Y L
Sbjct: 655 TYEALL 660
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 124/278 (44%), Gaps = 23/278 (8%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
+KP+ + Y +I+ +C +G++ A + M E P+ +I F + A+
Sbjct: 509 LKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRAL 568
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
++F MMR + T+ +I + ++ ++ +A +L+EM GI + T ++I++G
Sbjct: 569 EIFDMMRWSGCIPT-VHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHG 627
Query: 293 LLARGRLREAYKVVEEIEKP----DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
+ G +A++ +++ D+ Y L+K + R + A V REM +
Sbjct: 628 YASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRN 687
Query: 349 MHTYIMLLQGHLGKRG-------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYV 395
Y +L+ G +RG ++G P ++ T F+ KAG A K +
Sbjct: 688 TFVYNILIDG-WARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTI 746
Query: 396 ERVMNRGVEVPRFDYNKFLHYYSN----EEGVVMFEEV 429
+ + GV+ Y +H ++ E+ + F+E+
Sbjct: 747 QEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEM 784
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 93/230 (40%), Gaps = 3/230 (1%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHIM 134
TFN ++ + + ++ E L EM + N+ T+ + A + + K +F +
Sbjct: 585 TFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKL 644
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKP-NEIAYGWLIKGYCDVGDL 193
G E + ++K C+ + A + ++S P N Y LI G+ GD+
Sbjct: 645 KTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDV 704
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
EA+++ M EG +P I I K A K Q M V + + TY
Sbjct: 705 WEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGVKP-NIKTYTT 763
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
+I + +A +EM G++ D ++ LL+R + E Y
Sbjct: 764 LIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLMTSLLSRASVAEEY 813
>gi|414872431|tpg|DAA50988.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 1627
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 143/311 (45%), Gaps = 15/311 (4%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL--VNDKTFKIALM 116
FF++ K + + H++ T+ ++ + W+ +QEM R + V +
Sbjct: 1099 FFRWAAKRR-NYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSDVVR 1157
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIK-- 174
L + +++ + F+ + C+ + N ++ L + L ++S
Sbjct: 1158 MLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCF 1217
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+ + Y LI +C +G A ++ N M + G +P+ + +I FFK N A+ +
Sbjct: 1218 PDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSL 1277
Query: 235 FQMMRVK--RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
F+ MR + R D + TY +I + K G+I +AY EM + G D + ++++I
Sbjct: 1278 FEEMRHQYCRPD---VFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINF 1334
Query: 293 LLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLR-RAREATQVFREMIKRGCEP 347
L GRL +A K+ +E+E P + Y+ +IK L + RA E F M + G P
Sbjct: 1335 LGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISP 1394
Query: 348 TMHTYIMLLQG 358
+ TY +L+ G
Sbjct: 1395 SSFTYSILIDG 1405
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 150/379 (39%), Gaps = 78/379 (20%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVNFFHIM 134
T+ ++ +GK+ ID + EM R D F ++ L + L + F M
Sbjct: 1292 TYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEM 1351
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW--------IKPNEIAYGWLIKG 186
C S+ N ++K L E+K ++ W I P+ Y LI G
Sbjct: 1352 ETLRCIPSVVTYNTIIKAL------FESKSRASEVPSWFERMKESGISPSSFTYSILIDG 1405
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
+C + +A + M ++GF P +I+ K + D A ++FQ ++ ++
Sbjct: 1406 FCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELK----ENC 1461
Query: 247 GLST---YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
G S+ Y ++I + K G++ A M +EM K G
Sbjct: 1462 GSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGC------------------------ 1497
Query: 304 KVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
PD+ Y+ L+ GL R EA R M + GC P +++Y ++L G L K
Sbjct: 1498 -------APDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNG-LAKT 1549
Query: 364 GRKG---------------PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRF 408
G PD +V+++T+ G L AG +A+K ++ + G E
Sbjct: 1550 GGPHRAMEMLSNMKQSTVRPD-VVSYNTVL-GALSHAGMFEEASKLMKEMNTLGFEYDLI 1607
Query: 409 DYNKFL-------HYYSNE 420
Y+ L H Y+++
Sbjct: 1608 TYSSILEAIGKVDHEYTDQ 1626
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/198 (18%), Positives = 74/198 (37%), Gaps = 41/198 (20%)
Query: 68 PCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRR-RLVNDKTFKIALMTLAEVRELKK 126
PC A + ++D +GK++ DL E QE+ + + + + + L + L
Sbjct: 1429 PCPA----AYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDD 1484
Query: 127 MVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE--------------- 171
+N F MN GC + N ++ L + ++ EA + ++ E
Sbjct: 1485 AINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILN 1544
Query: 172 ---------------------WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEP 210
++P+ ++Y ++ G EASK+ M GFE
Sbjct: 1545 GLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEY 1604
Query: 211 SIDVVDKMIETFFKINKD 228
+ ++E K++ +
Sbjct: 1605 DLITYSSILEAIGKVDHE 1622
>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
Length = 761
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 160/364 (43%), Gaps = 23/364 (6%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIM 134
TFN+++ + K + L ++ ++ + ++ TF I + L L ++ +
Sbjct: 218 TFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSV 277
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDVGDL 193
G + N ++ LC+ VVEA KYL ++ ++P+ Y LI GYC +G L
Sbjct: 278 IREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGML 337
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
A KI +GF P +I + ++ D A+ +F K + + Y +
Sbjct: 338 QNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPT-VILYNM 396
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE-IEK- 311
+I +C+ G I QA M+ EM + G +D T + +I GL G + +A ++ + I K
Sbjct: 397 LIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKG 456
Query: 312 --PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPD 369
PD+ ++ LI G + + Q+ +M G P + TY +L G + K D
Sbjct: 457 YVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGL--SKAVKNED 514
Query: 370 PLVNFDT--------------IFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
+ F+T I L KAGK +A V+ ++N+G+ + +
Sbjct: 515 LMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIIS 574
Query: 416 YYSN 419
++N
Sbjct: 575 GFAN 578
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 113/231 (48%), Gaps = 7/231 (3%)
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLIL-KLSEWIKPNEIAYGWLIKGYCDVGD 192
M++ GC + N V+ LC+ V +A L+ +++ P+ + LI GYC
Sbjct: 417 MSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLK 476
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ +I N M G P + + ++ K K+++ M+ F+ M V++ TY
Sbjct: 477 METTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETM-VEKGCVPNKITYN 535
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI-EK 311
I+ + +CK GK+++A +++E+ +GI D ++ ++II G G L+ AY++ + E+
Sbjct: 536 ILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQ 595
Query: 312 PDIS----LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+S Y+ +I ++F EM GC P +TY +++ G
Sbjct: 596 YKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDG 646
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 127/279 (45%), Gaps = 18/279 (6%)
Query: 150 VKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGF 208
+K+ C+ K A L+ + S+ + N +AY ++ G+ + +EA +++N M G
Sbjct: 153 IKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGI 212
Query: 209 EPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAY 268
P + +K++ T K + E+ ++ + K M L T+ I I +C++G +S A
Sbjct: 213 FPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCS-NLFTFNIFIQGLCRKGMLSGAM 271
Query: 269 TMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA----YKVVEEIEKPDISLYHGLIKGL 324
+ML+ + + G+ D +T +++I GL + EA +K+V +PD Y+ LI G
Sbjct: 272 SMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGY 331
Query: 325 LRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG------------HLGKRGRKGPDPLV 372
++ + A ++ + I +G P TY L+ G KG P V
Sbjct: 332 CKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTV 391
Query: 373 NFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
+ + GL + G L A + + + G + YN
Sbjct: 392 ILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYN 430
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 133/312 (42%), Gaps = 24/312 (7%)
Query: 143 LEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWN 201
+ NK++ TLC++ V E++ L+ K L + + N + I+G C G L A + +
Sbjct: 216 VSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLD 275
Query: 202 LMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKR 261
+ EG P + + +I K + EA K + ++ G TY +ID CK
Sbjct: 276 SVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGF-TYNTLIDGYCKM 334
Query: 262 GKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLY 317
G + A +L+ +G D T S+I GL + A + KP + LY
Sbjct: 335 GMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILY 394
Query: 318 HGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG------------- 364
+ LIKGL + +A Q+ EM + GC + TY +++ G L K G
Sbjct: 395 NMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVING-LCKMGCVSDANNLMNDAI 453
Query: 365 RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYS----NE 420
KG P V + G K K + + ++ + GV YN L+ S NE
Sbjct: 454 AKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNE 513
Query: 421 EGVVMFEEVGKK 432
+ + FE + +K
Sbjct: 514 DLMETFETMVEK 525
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 138/311 (44%), Gaps = 31/311 (9%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIM 134
TFN ++D K ++ + L +M + D T+ L L++ + + ++ F M
Sbjct: 463 TFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETM 522
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGDL 193
+ GC + N + ++LC+ V EA L+ + L++ I P+ +++ +I G+ + GDL
Sbjct: 523 VEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDL 582
Query: 194 IEASKIWNLMTDE-GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS--- 249
A +++ M ++ + + MI F A K+ M K ++G
Sbjct: 583 KGAYQLFRRMGEQYKVSHTTATYNIMINAF--------AEKLDLHMGEKLFLEMGAGGCA 634
Query: 250 ----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
TYR++ID C G Y L EM ++G T +I L + R+ EA +
Sbjct: 635 PDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDI 694
Query: 306 VEEIEKPDISLYHGLIKGLLRL-----RRAREATQ-VFREMIKRGCEPTMHTYIMLLQGH 359
+ +++G++ ++ ++ A + V +++KR C T + Y +L G
Sbjct: 695 IH------FMVHNGIVPEVVNSISEADKKVVAAPKIVVEDLLKRSC-ITYYAYELLYDGI 747
Query: 360 LGKRGRKGPDP 370
K+ +K P
Sbjct: 748 RDKKTQKQKLP 758
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 108/270 (40%), Gaps = 36/270 (13%)
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
E Y +K Y G + EA ++ M EPS+ + ++ + +A KVF
Sbjct: 76 EGVYIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFL 135
Query: 237 MMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
RM ++G+ T+ I I C+ + A +L M +G + + + +++ G
Sbjct: 136 -----RMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAG 190
Query: 293 LLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
EAY++ ++ + PD+S ++ L+ L + +E+ ++ +++K+G
Sbjct: 191 FYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSN 250
Query: 349 MHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRF 408
+ T+ IF+ GL + G A ++ V+ G+
Sbjct: 251 LFTF-----------------------NIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVV 287
Query: 409 DYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
YN + VV E+ KL GL
Sbjct: 288 TYNTLICGLCKNSNVVEAEKYLHKLVNGGL 317
>gi|410109911|gb|AFV61035.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
alba]
Length = 413
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 137/288 (47%), Gaps = 41/288 (14%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T + L L ++R K + F+ + +CG SL N ++ C+ + A+ + +
Sbjct: 91 TCRKVLEHLMKLRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAI 150
Query: 170 SEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++W ++P+ ++Y L+ GY +GDL E ++ + M G +P + +I K +K
Sbjct: 151 TKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKM 210
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
D+A ++F M VK + G+ T+ +ID CK G++ A + ++M + + D +T ++
Sbjct: 211 DDANELFDEMLVKGLVPNGV-TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNT 269
Query: 289 IIYGLLARGRLREAYKVVEEIE----KPD------------------------------- 313
+IYGL +G L +A+ +++E+ KPD
Sbjct: 270 LIYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQEN 329
Query: 314 ISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
I L Y +I GL + R +A ++ REM+ G +P TY M++
Sbjct: 330 IRLDDVAYTAIISGLCQEGRPVDAEKMLREMLSVGLKPDTGTYTMIIN 377
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 102/256 (39%), Gaps = 75/256 (29%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
N +TF ++D K+ +DL E ++M + L+ D
Sbjct: 228 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPD------------------------ 263
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVG 191
L N ++ LC++ + +A LI ++S + +KP++ Y LI G C G
Sbjct: 264 ----------LITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLIDGCCKEG 313
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTY 251
DL D FE ++ + I R+DD+ Y
Sbjct: 314 DL-----------DAAFEHRKRMIQENI----------------------RLDDVA---Y 337
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK 311
+I +C+ G+ A ML EM G++ D T + II +G + + K+++E+++
Sbjct: 338 TAIISGLCQEGRPVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQR 397
Query: 312 ----PDISLYHGLIKG 323
P + Y+ L+ G
Sbjct: 398 NGHVPSVXTYNVLMNG 413
>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 1 [Brachypodium distachyon]
gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 2 [Brachypodium distachyon]
Length = 704
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 140/304 (46%), Gaps = 35/304 (11%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
N T+ + L L ++ K+ + + M + + ++ LC+ V A +
Sbjct: 264 NLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVY 323
Query: 167 LKLSEWIK----PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETF 222
SE IK P+ + Y L+KG+C G + EA K W+ M+ G ++ + M++
Sbjct: 324 ---SEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIR-NVTSYNIMLKGL 379
Query: 223 FKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEAD 282
F D+A +++++ + T+ +I +C++G +++ +LEE G E D
Sbjct: 380 FDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELD 439
Query: 283 NLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFR 338
+ SS+I GL GRL +A K+ E+I KP+ +Y+ LI G + + +A +V+
Sbjct: 440 EFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYS 499
Query: 339 EMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERV 398
+M + C PT TY L+ GL KA K L+A+++ +
Sbjct: 500 QMAENDCSPTTITYNTLIH-----------------------GLCKAEKYLEASRFTREM 536
Query: 399 MNRG 402
+ +G
Sbjct: 537 LEKG 540
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 131/293 (44%), Gaps = 23/293 (7%)
Query: 142 SLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIW 200
+L+ N ++++LC R + A L L + P+ I Y L+ G+ L A +
Sbjct: 158 NLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLL 217
Query: 201 NLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCK 260
+ M +P + ++ F+ + ++AM+V++ + L+TY +++D +CK
Sbjct: 218 DEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCK 277
Query: 261 RGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISL 316
G +A + E M + D +T ++I+GL + A +V E+ K PD+ +
Sbjct: 278 LGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVI 337
Query: 317 YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG---------------HLG 361
Y+ L+KG R EA + + M G + +Y ++L+G L
Sbjct: 338 YNSLLKGFCHAGRVGEAWKFWDSMSVSGIR-NVTSYNIMLKGLFDGGMVDKATDLWELLE 396
Query: 362 KRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
K PD +V F T+ + GL + G + + + +E G E+ F Y+ +
Sbjct: 397 KDDSLSPD-MVTFSTM-IHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMI 447
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 121/290 (41%), Gaps = 42/290 (14%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
TF + L E K + G E + ++ LC+ + +A L K+
Sbjct: 407 TFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKI 466
Query: 170 S-EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
S + KPN Y LI G+C +A ++++ M + P+ + +I K K
Sbjct: 467 SMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKY 526
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
EA + + M +++ L ++TY +I +C+ KI A + ++ +G++ D + +
Sbjct: 527 LEASRFTREM-LEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNI 585
Query: 289 IIYGLLARGRLREAYKVVEEIEK------------------------------------- 311
+I+GL + G++ EA +++ E+++
Sbjct: 586 LIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILEN 645
Query: 312 ---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
PDI Y+ IKGL R E Q+ EM+ G PT T+ +L++
Sbjct: 646 GLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRA 695
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 104/230 (45%), Gaps = 24/230 (10%)
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR---VKRMDDLGLSTYRIVIDWMCKRGK 263
G P + + +++ F + + +A F + R L TY I++ +C RG
Sbjct: 115 GCNPGVRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIMLRSLCVRGD 174
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHG 319
+ +A T+ + + RG+ D +T S+++ G + RL A +++E+ +PD Y+
Sbjct: 175 LDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNA 234
Query: 320 LIKGLLRLRRAREATQVFREMIKR-GCEPTMHTYIMLLQG--HLGKRGRKG--------- 367
L+ G R +A +V+ ++++ G P + TY ++L G LG G
Sbjct: 235 LLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVAN 294
Query: 368 ---PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
PD ++ + T+ + GL ++ AA+ ++ G+ YN L
Sbjct: 295 NHQPD-MITYGTM-IHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLL 342
>gi|255549371|ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545176|gb|EEF46686.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 613
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 155/318 (48%), Gaps = 9/318 (2%)
Query: 72 HNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNF 130
+N+ T+ +++ G S I + ++M R + D F + ++ +K+
Sbjct: 283 YNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMKRAFAL 342
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCD 189
F +N+ G + ++ C + A+ L+ ++ S+ + N + + LI GYC
Sbjct: 343 FDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCK 402
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
G + EA ++ ++M +GFE I + + K+N+ +EA + M K +D +S
Sbjct: 403 KGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVS 462
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
+ I+ID CK G + +A + ++M K+G + + +T +++I G +G+L+EAY++ +E+
Sbjct: 463 -FTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEM 521
Query: 310 EK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
E DI Y L+ G + EA + E+ ++G ++ TY ++ G L K GR
Sbjct: 522 ESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISG-LSKEGR 580
Query: 366 KGPDPLVNFDTIFVGGLV 383
+ +D + GL
Sbjct: 581 -SEEAFRLYDEMMAAGLT 597
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/412 (21%), Positives = 180/412 (43%), Gaps = 61/412 (14%)
Query: 106 VNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYL 165
++D++ + L+ L ++ + FF M + + ++ + V+ LC++ V AK L
Sbjct: 178 IDDRSCIVCLLALKRSDQMVMSLGFFKKMVEFKVDVTVYSMTIVIDGLCKKGRVERAKDL 237
Query: 166 ILKLS-EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFK 224
+L+++ + IKPN + Y L+ Y + D +++ LM + + +IE +
Sbjct: 238 MLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLRLMEMDKVVYNAATYTLLIEWYGS 297
Query: 225 INKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNL 284
K EA KVF+ M ++R + + + +I W CK G + +A+ + +E+ +RG+ A+
Sbjct: 298 SGKIAEAEKVFEKM-LERGVEADIHVFTSIISWQCKLGNMKRAFALFDELNERGLVANAH 356
Query: 285 TLSSIIYGLLARGRLREAYKVVEEIE---------------------------------- 310
T ++I+G G+L A +V E++
Sbjct: 357 TYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVM 416
Query: 311 -----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG- 364
+ DI Y+ + GL +L R EA + M+++G +P ++ +++ H K G
Sbjct: 417 EKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHC-KEGN 475
Query: 365 ------------RKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
+KG P +V ++T+ + G K GK +A + + + + G+ + Y
Sbjct: 476 LVEAERVFQDMKKKGEKPNVVTYNTL-IDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYT 534
Query: 412 KFLH----YYSNEEGVVMFEEVGKKLREVGLADLADIFQRYGKKMATRERRR 459
+H + EE + + EV +K + + I K+ + E R
Sbjct: 535 TLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFR 586
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 112/280 (40%), Gaps = 77/280 (27%)
Query: 201 NLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD---------------- 244
N M +EGF+ V D M+ KI D+ + ++ +KR D
Sbjct: 158 NSMFEEGFK----VFDYMVHNGLKI---DDRSCIVCLLALKRSDQMVMSLGFFKKMVEFK 210
Query: 245 -DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGI------------------------ 279
D+ + + IVID +CK+G++ +A ++ EM +GI
Sbjct: 211 VDVTVYSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVN 270
Query: 280 ------EADNLTLSSIIYGLL-----ARGRLREAYKVVEEI----EKPDISLYHGLIKGL 324
E D + ++ Y LL + G++ EA KV E++ + DI ++ +I
Sbjct: 271 EMLRLMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQ 330
Query: 325 LRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVN----------- 373
+L + A +F E+ +RG HTY L+ G + LVN
Sbjct: 331 CKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNL 390
Query: 374 --FDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
F+T+ + G K G +A + + + +G E F YN
Sbjct: 391 VIFNTL-INGYCKKGMIDEALRMQDVMEKKGFENDIFTYN 429
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 82/196 (41%), Gaps = 35/196 (17%)
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAK-YLILKLSEWIKPNEIAYGWLIKGYCDVG 191
+M G E + N + LC+ EAK +L + + + PN +++ +I +C G
Sbjct: 415 VMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEG 474
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD------ 245
+L+EA +++ M +G +P++ + +I+ + K K EA ++ M M
Sbjct: 475 NLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYT 534
Query: 246 ----------------------------LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKR 277
+ + TY +I + K G+ +A+ + +EM
Sbjct: 535 TLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDEMMAA 594
Query: 278 GIEADNLTLSSIIYGL 293
G+ D+ +S++ L
Sbjct: 595 GLTPDDRVYTSLVANL 610
>gi|302756087|ref|XP_002961467.1| hypothetical protein SELMODRAFT_77006 [Selaginella moellendorffii]
gi|300170126|gb|EFJ36727.1| hypothetical protein SELMODRAFT_77006 [Selaginella moellendorffii]
Length = 500
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 151/343 (44%), Gaps = 35/343 (10%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIM 134
+TF ++ K+R ++ WE QEM + F ++ +EL +M ++
Sbjct: 47 VTFTALIRGFCKNRMVERAWEIFQEMIKSNRCQPDCFLYGVLIDGYCKEL-RMDRALELL 105
Query: 135 NDCGCEYSLE----MLNKVVKTLCQRKLVVEA-KYLILKL-SEWIKPNEIAYGWLIKGYC 188
+ E ++ + N +V LC+ +EA K+L + + P + Y LI+G C
Sbjct: 106 REMRVERRIQPDVVIYNSIVDGLCRSNRFLEAWKFLDETMVRQGCSPTVVTYTSLIRGAC 165
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG- 247
+ A IWN M + +P+I +I+ K + +A +V V+ M+ LG
Sbjct: 166 KAKKMKLAMTIWNAMLERKIQPTIVSYSVIIDGLSKAGRVYDAYRV-----VREMETLGC 220
Query: 248 ---LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK 304
+ Y +ID +CK G + AY + M + G + T +++I R A
Sbjct: 221 ELNVVIYTTLIDGLCKSGFLDDAYALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALG 280
Query: 305 VVEEIEK--P-DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG 361
+ + I P D+++Y ++ GL R RR +A +FREM G H Y +LL G
Sbjct: 281 LFDHIRDYCPLDVAMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHGAF- 339
Query: 362 KRGRK----------GPDP-----LVNFDTIFVGGLVKAGKSL 389
+ GR G DP L+ ++T+ G +++G L
Sbjct: 340 RSGRSEEAFRILEELGDDPGCVANLLTYNTVIAGCCLESGMVL 382
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 149/349 (42%), Gaps = 28/349 (8%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
N F + L++ L +M D G + +++ C+ ++V A +
Sbjct: 10 NQHAFASLIDALSKSNRLGDAARALELMCDAGIHPDVVTFTALIRGFCKNRMVERAWEIF 69
Query: 167 LKL--SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLM-TDEGFEPSIDVVDKMIETFF 223
++ S +P+ YG LI GYC + A ++ M + +P + + + +++
Sbjct: 70 QEMIKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGLC 129
Query: 224 KINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADN 283
+ N+ EA K V++ + TY +I CK K+ A T+ M +R I+
Sbjct: 130 RSNRFLEAWKFLDETMVRQGCSPTVVTYTSLIRGACKAKKMKLAMTIWNAMLERKIQPTI 189
Query: 284 LTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFRE 339
++ S II GL GR+ +AY+VV E+E + ++ +Y LI GL + +A ++R
Sbjct: 190 VSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALYRI 249
Query: 340 MIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFD-------------TIFVGGLVKAG 386
M + G P TY L+ R + L FD T V GL +
Sbjct: 250 MKRSGAFPNQRTYATLIDTFC--RNDRTETALGLFDHIRDYCPLDVAMYTAVVSGLCRE- 306
Query: 387 KSLDAAKYVERVMN-RGVEVPRFDYNKFLHYY----SNEEGVVMFEEVG 430
+ LD A+ + R M GV YN LH +EE + EE+G
Sbjct: 307 RRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSGRSEEAFRILEELG 355
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 115/251 (45%), Gaps = 21/251 (8%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
PN+ A+ LI L +A++ LM D G P + +I F K + A ++
Sbjct: 9 PNQHAFASLIDALSKSNRLGDAARALELMCDAGIHPDVVTFTALIRGFCKNRMVERAWEI 68
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEM-FKRGIEADNLTLSSIIYGL 293
FQ M Y ++ID CK ++ +A +L EM +R I+ D + +SI+ GL
Sbjct: 69 FQEMIKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGL 128
Query: 294 LARGRLREAYKVVEEIE-----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
R EA+K ++E P + Y LI+G + ++ + A ++ M++R +PT
Sbjct: 129 CRSNRFLEAWKFLDETMVRQGCSPTVVTYTSLIRGACKAKKMKLAMTIWNAMLERKIQPT 188
Query: 349 MHTYIMLLQGHLGKRGRK-------------GPDPLVNFDTIFVGGLVKAGKSLDAAKYV 395
+ +Y +++ G L K GR G + V T + GL K+G LD A +
Sbjct: 189 IVSYSVIIDG-LSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSG-FLDDAYAL 246
Query: 396 ERVMNRGVEVP 406
R+M R P
Sbjct: 247 YRIMKRSGAFP 257
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/323 (19%), Positives = 134/323 (41%), Gaps = 45/323 (13%)
Query: 64 QKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK--TFKIALMTLAEV 121
++ QP + + +N +VD + +S W+ L E R+ + T+ + +
Sbjct: 112 RRIQP----DVVIYNSIVDGLCRSNRFLEAWKFLDETMVRQGCSPTVVTYTSLIRGACKA 167
Query: 122 RELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAY 180
+++K + ++ M + + ++ + ++ L + V +A ++ ++ + N + Y
Sbjct: 168 KKMKLAMTIWNAMLERKIQPTIVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIY 227
Query: 181 GWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
LI G C G L +A ++ +M G P+ +I+TF + ++ + A+ +F +R
Sbjct: 228 TTLIDGLCKSGFLDDAYALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHIR- 286
Query: 241 KRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
L ++ Y V+ +C+ ++ A + EM G+ AD + +++G GR
Sbjct: 287 -DYCPLDVAMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSGRSE 345
Query: 301 EAYKVVEEIE------------------------------------KPDISLYHGLIKGL 324
EA++++EE+ PD + Y LI L
Sbjct: 346 EAFRILEELGDDPGCVANLLTYNTVIAGCCLESGMVLFYEMRQRGIAPDFATYSALIDRL 405
Query: 325 LRLRRAREATQVFREMIKRGCEP 347
L R A + EM+ G P
Sbjct: 406 LGSGEIRRAFDLCEEMLASGLSP 428
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 81/202 (40%), Gaps = 12/202 (5%)
Query: 124 LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWL 183
L + IM G + ++ T C+ A L + ++ + Y +
Sbjct: 240 LDDAYALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHIRDYCPLDVAMYTAV 299
Query: 184 IKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM 243
+ G C L +A ++ M G + ++ F+ + +EA ++ + +
Sbjct: 300 VSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSGRSEEAFRILEELG---- 355
Query: 244 DDLG----LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
DD G L TY VI C + + EM +RGI D T S++I LL G +
Sbjct: 356 DDPGCVANLLTYNTVIAGCC----LESGMVLFYEMRQRGIAPDFATYSALIDRLLGSGEI 411
Query: 300 REAYKVVEEIEKPDISLYHGLI 321
R A+ + EE+ +S G++
Sbjct: 412 RRAFDLCEEMLASGLSPPSGVL 433
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 97/237 (40%), Gaps = 7/237 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRR-RLVNDKTFKIALMTLAEVRELKKMVNFF 131
N + + ++D + KS +D + + M R N +T+ + T + + F
Sbjct: 223 NVVIYTTLIDGLCKSGFLDDAYALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLF 282
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDV 190
+ D C + M VV LC+ + + +A+ L ++ + + AY L+ G
Sbjct: 283 DHIRD-YCPLDVAMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHGAFRS 341
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G EA +I + D+ P T + M +F MR +R +T
Sbjct: 342 GRSEEAFRILEELGDD---PGCVANLLTYNTVIAGCCLESGMVLFYEMR-QRGIAPDFAT 397
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
Y +ID + G+I +A+ + EEM G+ + L ++ L R A K++E
Sbjct: 398 YSALIDRLLGSGEIRRAFDLCEEMLASGLSPPSGVLGRVVARLCWSRRGDLAAKLIE 454
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/432 (22%), Positives = 180/432 (41%), Gaps = 72/432 (16%)
Query: 62 YTQKAQPCFAH-------------NSITFNRMVDIIGK---SRNIDLFWETLQEMGRRRL 105
Y Q QP A N +T N +++ + + S ++ E + + +
Sbjct: 145 YVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGI 204
Query: 106 V-NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKY 164
V N TF I + + K V F ++M C N ++ TLC++ + +A+
Sbjct: 205 VPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARD 264
Query: 165 LILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSI----------- 212
L++ + S + PN Y L+ GYC +G L EA+ + LMT P +
Sbjct: 265 LLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLC 324
Query: 213 ----------------------DVV--DKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
DVV + +I + +K EA K+ + M K + +
Sbjct: 325 NEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAV 384
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
T+ I++ W CK GK+ A + +M + G D +T +++I G G + EA++ ++E
Sbjct: 385 -THNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDE 443
Query: 309 IEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG--- 361
+ + ++ + + +++ L R ++ EA ++ KRG +Y L+ G+
Sbjct: 444 MGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGN 503
Query: 362 -KRGRKGPDPL---------VNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
R K D + V ++ I +GGL + GK+ A + ++ G+ YN
Sbjct: 504 VDRALKLWDEMKEKEIIPSTVTYNCI-IGGLCQCGKTEQAISKLNELLESGLLPDETTYN 562
Query: 412 KFLHYYSNEEGV 423
LH Y E V
Sbjct: 563 TILHGYCREGDV 574
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 161/371 (43%), Gaps = 77/371 (20%)
Query: 63 TQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEV 121
T+ + F+ + +T+N +++ K+ N+ + T+ EMGR+ + D T L TL
Sbjct: 407 TKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCRE 466
Query: 122 RELKK-----------------------MVNFFHIMNDCGCEYSLEM------------- 145
++L++ +V +F D + +L++
Sbjct: 467 KKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFK---DGNVDRALKLWDEMKEKEIIPST 523
Query: 146 --LNKVVKTLCQRKLVVEAKYLILKLSEWIK----PNEIAYGWLIKGYCDVGDLIEASKI 199
N ++ LCQ +A I KL+E ++ P+E Y ++ GYC GD+ +A +
Sbjct: 524 VTYNCIIGGLCQCGKTEQA---ISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQF 580
Query: 200 WNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMC 259
N M + F+P + + ++ ++A+K+F V + + TY +I +C
Sbjct: 581 HNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTW-VSKGKAIDTVTYNTLITSLC 639
Query: 260 KRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA----YKVVEEIEKPDIS 315
K G++ A+ +L EM ++ + D+ T ++II L GR+REA K++E+ PD
Sbjct: 640 KEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQV 699
Query: 316 L-----------------------YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
L Y IK L + ++A ++F E ++G TY
Sbjct: 700 LQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTY 759
Query: 353 IMLLQGHLGKR 363
I L+ G + +R
Sbjct: 760 INLMDGLIKRR 770
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 96/211 (45%), Gaps = 22/211 (10%)
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
++T+ IVI C K A L M K DN+T ++I+ L +GRL +A ++
Sbjct: 208 VNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLM 267
Query: 308 EIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
+++ P+ + Y+ L+ G ++ +EA V M + P + TY ML+ G L
Sbjct: 268 DMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLING-LCNE 326
Query: 364 GRKG---------------PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRF 408
GR PD +V+++T+ + G ++ K +A K +E + +GV+
Sbjct: 327 GRIEEAFKLRDEMENLKLLPD-VVSYNTL-INGCLEWSKISEAFKLLEEMSEKGVKPNAV 384
Query: 409 DYNKFLHYYSNEEGVVMFEEVGKKLREVGLA 439
+N + +Y E + K+ E G +
Sbjct: 385 THNIMVKWYCKEGKMDDASNTITKMEESGFS 415
>gi|255660814|gb|ACU25576.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
Length = 418
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 158/346 (45%), Gaps = 36/346 (10%)
Query: 104 RLVNDKTFKIALMTLAEVRE-------LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQR 156
RL + F++ T +V E K + F+ +CG SL N ++ + C+
Sbjct: 90 RLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFCKE 149
Query: 157 KLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVV 215
+ A+ + +++W ++P+ +++ L+ GY +GDL E ++ N M G +P +
Sbjct: 150 GEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTY 209
Query: 216 DKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMF 275
+I K +K D+A ++F M + G+ T+ +ID CK G++ A + ++M
Sbjct: 210 SVLINGLCKESKMDDANELFDEMLDNGLVPNGV-TFTTLIDGHCKNGRVDLAMEIYKQML 268
Query: 276 KRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAR 331
+ + D +T +++IYGL +G L++A +++E+ KPD Y LI G +
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLE 328
Query: 332 EATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDA 391
A + + MIK Y T + GL + G+S+DA
Sbjct: 329 TAFEYRKIMIKENIRLDDVAY-----------------------TALISGLCQEGRSVDA 365
Query: 392 AKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVG 437
K + +++ G+++ Y ++ + + V ++ K+++ G
Sbjct: 366 EKMLREMLSVGLKLEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDG 411
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 38/208 (18%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
N +TF ++D K+ +DL E ++M + L D
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPD------------------------ 275
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVG 191
L N ++ LC++ + +A+ LI ++S + +KP++I Y LI G C G
Sbjct: 276 ----------LITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEG 325
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLST 250
DL A + +M E +I + + +A K+ +M+ V ++G T
Sbjct: 326 DLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKLEIG--T 383
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRG 278
Y ++I+ CK+G + +++EM + G
Sbjct: 384 YTMIINEFCKKGDVWTGSKLMKEMQRDG 411
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 143/295 (48%), Gaps = 13/295 (4%)
Query: 73 NSITFNRMVDIIGKSRNID---LFWETLQEMGR-RRLVNDKTFKIALMTLAEVRELKKMV 128
N+ T+N ++ + +I+ + +E + +MG +V T +T V +++
Sbjct: 407 NTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLL 466
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGY 187
+ +M + GCE N++V + + A + ++ E + PN ++Y LI G+
Sbjct: 467 D---LMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGH 523
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
G + A + M + G P+++ + +I K N+ EA K+ M V++
Sbjct: 524 SKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKM-VEQGLLPN 582
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
+ TY +ID +C+ G+ A+ + +M KR + T SS+IYGL G+ EA +++
Sbjct: 583 VITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLK 642
Query: 308 EIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
E+E+ PD + LI G + L R A + R M+ GC+P TY +LL+G
Sbjct: 643 EMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKG 697
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 146/336 (43%), Gaps = 19/336 (5%)
Query: 86 KSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLE 144
++RN+DL + M + N T+ + L + + ++ M + G E ++
Sbjct: 245 RNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVY 304
Query: 145 MLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLM 203
+ LC + EA L+ ++ + +PN Y LI G +G L A +++ M
Sbjct: 305 TYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKM 364
Query: 204 TDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGK 263
EG P+ + +I + A+K+F M TY +I +C G
Sbjct: 365 LKEGLVPNTVTYNALINELCVGGRFSTALKIFHWME-GHGSLANTQTYNEIIKGLCLGGD 423
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHG 319
I +A + E+M K G +T +++I G L +G + A ++++ +++ PD Y+
Sbjct: 424 IEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNE 483
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------------LGKRGRKG 367
L+ G + + A+ F+EM++ G P +Y L+ GH L + G
Sbjct: 484 LVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMG 543
Query: 368 PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
+P V + GL K + +A K ++++ +G+
Sbjct: 544 CNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGL 579
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 164/379 (43%), Gaps = 34/379 (8%)
Query: 104 RLVNDKTFK----IALMTLAEVR---ELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQR 156
RLV D+ F I ++ + R E++++ +F + ++ G +SL N ++ L +
Sbjct: 117 RLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKF 176
Query: 157 KLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVV 215
++V A+ L + L+ I+P+ + + LI G + EA I + + P +
Sbjct: 177 EMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTY 236
Query: 216 DKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMF 275
+I + D A VF M VK D TY +I+ +C G++ +A MLEEM
Sbjct: 237 TSLILGHCRNRNLDLAFGVFDRM-VKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMI 295
Query: 276 KRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAR 331
++GIE T + I L A EA ++V ++K P++ Y LI GL RL +
Sbjct: 296 EKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLE 355
Query: 332 EATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR-----------KGPDPLVNFDTI--F 378
A ++ +M+K G P TY L+ L GR +G L N T
Sbjct: 356 VAIGLYHKMLKEGLVPNTVTYNALIN-ELCVGGRFSTALKIFHWMEGHGSLANTQTYNEI 414
Query: 379 VGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVV-------MFEEVGK 431
+ GL G A E+++ G YN ++ Y + V + +E G
Sbjct: 415 IKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGC 474
Query: 432 KLREVGLADLADIFQRYGK 450
+ E +L F ++GK
Sbjct: 475 EPDEWTYNELVSGFSKWGK 493
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 10/165 (6%)
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGD 192
M + GC ++E N V+ L + EA+ + K+ E + PN I Y LI G C G
Sbjct: 539 MEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGR 598
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS--- 249
A KI++ M P++ +I + K DEA + +K M+ GL+
Sbjct: 599 TQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAE-----ILLKEMERKGLAPDE 653
Query: 250 -TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
T+ +ID G+I A+ +L M G + + T S ++ GL
Sbjct: 654 VTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGL 698
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 142/303 (46%), Gaps = 18/303 (5%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEA 196
GC+ + ++ +C+ A L+ K+ IKP+ + Y +I C G L +A
Sbjct: 225 GCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDA 284
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVID 256
++ M +G + ++ + +I +F + D+ ++ + M +++ + T+ +ID
Sbjct: 285 LSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITP-NVVTFSALID 343
Query: 257 WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----P 312
+ K GK+++A + EM RGIE + +T +S+IYGL RL EA ++++ + P
Sbjct: 344 SLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDP 403
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG-------- 364
DI Y+ LI G + ++ + ++FR+M RG TY L+QG R
Sbjct: 404 DIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVF 463
Query: 365 ----RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE 420
+G P + I + GL G+ +A ++++ +E+ YN +H N
Sbjct: 464 QEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNA 523
Query: 421 EGV 423
V
Sbjct: 524 NKV 526
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 142/294 (48%), Gaps = 7/294 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
N T+N ++ D + L++M R++ N TF + +L + +L + + +
Sbjct: 299 NVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLY 358
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDV 190
+ M G E + N ++ LC K + EA ++ L +S+ P+ Y LI G+C
Sbjct: 359 NEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKA 418
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
+ + +++ M+ G +I+ F + K A KVFQ M V + G+ T
Sbjct: 419 KQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEM-VSQGVHPGIMT 477
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y I++D +C G++ +A +L++M K +E D + II+G+ ++ +A+ + +
Sbjct: 478 YAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLP 537
Query: 311 ----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL 360
K DI Y+ ++ GL + EA +FR+M + G EP TY L++ HL
Sbjct: 538 SKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHL 591
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/433 (20%), Positives = 170/433 (39%), Gaps = 91/433 (21%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTL 118
FQ +++P I FNR+ ++ +++ DL ++M
Sbjct: 77 LFQSMLRSRP--LPTVIDFNRLFGLLARTKQYDLVLALCKQM------------------ 116
Query: 119 AEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRK---LVVEAKYLILKLSEWIKP 175
ELK G Y L LN ++ C+R+ A I KL +P
Sbjct: 117 ----ELK------------GIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLG--YEP 158
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
N + + L+ G C G + EA ++ + M P + ++ ++ ++ EA+ +
Sbjct: 159 NTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLI 218
Query: 236 QMMR--------------VKRMDDLG--------------------LSTYRIVIDWMCKR 261
M + RM G + TY I+ID +CK
Sbjct: 219 ARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKD 278
Query: 262 GKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLY 317
G++ A + EM +GI+A+ T +S+I + GR + +++ ++ P++ +
Sbjct: 279 GRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTF 338
Query: 318 HGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG------------R 365
LI L++ + EA ++ EMI RG EP TY L+ G +
Sbjct: 339 SALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVS 398
Query: 366 KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVM 425
KG DP + I + G KA + D + ++ RG+ Y+ + + +++
Sbjct: 399 KGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIV 458
Query: 426 FEEVGKKLREVGL 438
++V +++ G+
Sbjct: 459 AKKVFQEMVSQGV 471
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 127/272 (46%), Gaps = 3/272 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N+IT+N ++ + + +D + + M + D T+ I + + +++ + F
Sbjct: 369 NTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLF 428
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQ-RKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDV 190
M+ G + +++ CQ RKL+V K +S+ + P + Y L+ G CD
Sbjct: 429 RKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDN 488
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G+L EA I + M E I + + +I NK D+A +F + K + + +
Sbjct: 489 GELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKR-DIQS 547
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y I++ +CKR +S+A + +M + G E D T +++I L + + +++EE++
Sbjct: 548 YNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMK 607
Query: 311 KPDISLYHGLIKGLLRLRRAREATQVFREMIK 342
+ S +K ++ + + E + F M+
Sbjct: 608 RCGFSSDASTVKIVMDMLSSGELDKSFLNMLS 639
>gi|15237345|ref|NP_197146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170213|sp|Q9FFE3.1|PP388_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16420, mitochondrial; Flags: Precursor
gi|9759124|dbj|BAB09609.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332004907|gb|AED92290.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 535
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 171/366 (46%), Gaps = 36/366 (9%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
N T N +V + K +I+ ++ L E+ LV N T+ L +++
Sbjct: 190 NIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVL 249
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
M D G ++ C+ EA ++ + + I+PNE+ YG +I+ C
Sbjct: 250 EEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKE 309
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLS 249
EA +++ M + F P + K+I+ + +K DEA ++ +M++ M D L
Sbjct: 310 KKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALL 369
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
+ +I W+CK G++++A + +E F++G LT +++I G+ +G L EA ++ +++
Sbjct: 370 S--TLIHWLCKEGRVTEARKLFDE-FEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDM 426
Query: 310 E----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
KP+ Y+ LI+GL + +E +V EM++ GC P T+++L +
Sbjct: 427 YERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFE-------- 478
Query: 366 KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE--EGV 423
GL K GK DA K V + G +V + + FL ++ E +GV
Sbjct: 479 ---------------GLQKLGKEEDAMKIVSMAVMNG-KVDKESWELFLKKFAGELDKGV 522
Query: 424 VMFEEV 429
+ +E+
Sbjct: 523 LPLKEL 528
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 173/396 (43%), Gaps = 29/396 (7%)
Query: 60 FQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL---VNDKTFKIALM 116
F Y K+ P F HN T++ ++ + ++R D + ++ + F L
Sbjct: 69 FLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLR 128
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQ--RKLVVEAKYLILKLSEWIK 174
+ + F + D G + S+ LN ++ L Q R +V A + K S I
Sbjct: 129 NYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGIT 188
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
PN L+K C D+ A K+ + + G P++ ++ + + A +V
Sbjct: 189 PNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRV 248
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
+ M + R +TY +++D CK G+ S+A T++++M K IE + +T +I L
Sbjct: 249 LEEM-LDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALC 307
Query: 295 ARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
+ EA + +E+ + PD SL +I L + EA ++R+M+K C P +
Sbjct: 308 KEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPD-N 366
Query: 351 TYIMLLQGHLGKRGR------------KGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVER 397
+ L L K GR KG P L+ ++T+ + G+ + G+ +A + +
Sbjct: 367 ALLSTLIHWLCKEGRVTEARKLFDEFEKGSIPSLLTYNTL-IAGMCEKGELTEAGRLWDD 425
Query: 398 VMNRGVEVPRFDYNKFLHYYSN----EEGVVMFEEV 429
+ R + F YN + S +EGV + EE+
Sbjct: 426 MYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEM 461
>gi|224081867|ref|XP_002306508.1| predicted protein [Populus trichocarpa]
gi|222855957|gb|EEE93504.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/414 (23%), Positives = 179/414 (43%), Gaps = 33/414 (7%)
Query: 23 ESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVD 82
SR + S NL Q + + W+ FF + + + F H + T+NRM+D
Sbjct: 30 HSRTPNPPQSDPLNLDSSTVFQTLSCYNNDWKRALDFFNWVE-TESQFQHTTETYNRMID 88
Query: 83 IIGKSRNIDLFWETLQEMGRRRLV--NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCE 140
I+GK DL W+ +Q M N TF++ + + V+ + D E
Sbjct: 89 ILGKFFEFDLSWDLIQRMRNNPFSTPNHTTFRVLFHRYISAHLVNEAVSVYE---DRLKE 145
Query: 141 YSLEMLNK---VVKTLCQRKLVVEAKYLILKLSEWIKPNEI---AYGWLIKGYCDVGDLI 194
+ L+ +V LC+ K V+EA L + Y +++G+ +G
Sbjct: 146 FGLKDETSYCILVDALCEYKHVIEAHELCFGNNNNSINVRNITKIYNMILRGWFKMGWWG 205
Query: 195 EASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIV 254
+ + W M + + ++ K K +A+K+++ M+ K + L + Y V
Sbjct: 206 KCREFWEEMDRKEVCKDLHSYSIYMDILCKSGKPWKAVKLYKEMKSKGI-KLDVVAYNTV 264
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK--- 311
I+ + + + EM + G + + +T +++I L GR++EAYK+++E+ +
Sbjct: 265 INAIGLSEGVDFVLRVYREMRELGCQPNVVTCNTVIKLLCENGRIKEAYKMLDEMPQSYI 324
Query: 312 -PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ--GHLG------- 361
PD+ YH + L + +E +F +MI+ G P M TY+ML++ G G
Sbjct: 325 APDVFTYHCFFRC---LEKPKEILCLFDQMIENGVCPRMDTYVMLMRKFGRWGFLRPVFL 381
Query: 362 ---KRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEV-PRFDYN 411
K + G P + L++ G A KY E +M +G+ PR + N
Sbjct: 382 VWKKMEKLGCSPDEFAYNALIDALIQKGMVDMARKYDEEMMAKGLSAKPRVELN 435
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 41/240 (17%), Positives = 100/240 (41%), Gaps = 29/240 (12%)
Query: 204 TDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGK 263
T+ F+ + + ++MI+ K + D + + Q MR +T+R++
Sbjct: 72 TESQFQHTTETYNRMIDILGKFFEFDLSWDLIQRMRNNPFSTPNHTTFRVLFHRYISAHL 131
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV------EEIEKPDISLY 317
+++A ++ E+ K D + ++ L + EA+++ + +Y
Sbjct: 132 VNEAVSVYEDRLKEFGLKDETSYCILVDALCEYKHVIEAHELCFGNNNNSINVRNITKIY 191
Query: 318 HGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTI 377
+ +++G ++ + + + EM ++ +H+Y +I
Sbjct: 192 NMILRGWFKMGWWGKCREFWEEMDRKEVCKDLHSY-----------------------SI 228
Query: 378 FVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVG 437
++ L K+GK A K + + ++G+++ YN ++ EGV V +++RE+G
Sbjct: 229 YMDILCKSGKPWKAVKLYKEMKSKGIKLDVVAYNTVINAIGLSEGVDFVLRVYREMRELG 288
>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
Length = 578
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 152/338 (44%), Gaps = 47/338 (13%)
Query: 70 FAHNSITFNRMVDI------IGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRE 123
A + T+N ++D G ++D+ + + E G TF + + +
Sbjct: 222 LAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTA--VTFGVLINGYCKNSN 279
Query: 124 LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGW 182
V F M G S+ N ++ LC V E L+ ++ + + PNEI +G
Sbjct: 280 TAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGC 339
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK- 241
++KG+C G + +A+ + MT+ EP + + + +I+ + ++ K ++AM V + M K
Sbjct: 340 VLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKG 399
Query: 242 -----------------------------RMDDLGLS----TYRIVIDWMCKRGKISQAY 268
M + G+ TY ++I +C +G++ +A
Sbjct: 400 ISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAV 459
Query: 269 TMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGL 324
+L+EM + G+E ++LT ++II G +G ++ AY++ +EK ++ Y+ IK
Sbjct: 460 KLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYF 519
Query: 325 LRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
++ + EA + EM+ + P TY + +G + K
Sbjct: 520 CQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEK 557
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 162/381 (42%), Gaps = 41/381 (10%)
Query: 56 VYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIA 114
Y F ++ P ++ + N ++ + ++ +DL + + RRR+ D TF
Sbjct: 138 AYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTV 197
Query: 115 LMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-- 172
+ L + +L+K + + G S+ N ++ C++ ++ + L E
Sbjct: 198 ISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVE 257
Query: 173 --IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDE 230
I P + +G LI GYC + A +++ M +G S+ + +I K +E
Sbjct: 258 AGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEE 317
Query: 231 AMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTL 286
+K+ + M+DLGLS T+ V+ CK+G ++ A ++ M +R +E D +
Sbjct: 318 GVKLME-----EMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIY 372
Query: 287 SSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIK 342
+ +I G++ +A V E + K P+++ Y+ LI G R R A+ + EM +
Sbjct: 373 NILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKE 432
Query: 343 RGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
+G E + TY + +G L G+ A K ++ + G
Sbjct: 433 KGIEADVVTY-----------------------NVLIGALCCKGEVRKAVKLLDEMSEVG 469
Query: 403 VEVPRFDYNKFLHYYSNEEGV 423
+E YN + + ++ +
Sbjct: 470 LEPNHLTYNTIIQGFCDKGNI 490
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 94/227 (41%), Gaps = 42/227 (18%)
Query: 75 ITFNRMVDI---IGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFF 131
+ +N ++D+ +GK + E + + G N T+ + + + +
Sbjct: 370 VIYNILIDVYRRLGKMEDAMAVKEAMAKKGISP--NVTTYNCLITGFSRSGDWRSASGLL 427
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
M + G E + N ++ LC + V +A L+ ++SE ++PN + Y +I+G+CD
Sbjct: 428 DEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDK 487
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G++ A +I M E +VV T
Sbjct: 488 GNIKSAYEIRTRM--EKCRKRANVV----------------------------------T 511
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
Y + I + C+ GK+ +A +L EM + + + +T +I G++ +G
Sbjct: 512 YNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 71/168 (42%), Gaps = 23/168 (13%)
Query: 285 TLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREM 340
++++++ GL+ R+ A K + PDI ++ +I GL R+ + R+A V +++
Sbjct: 158 SVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDI 217
Query: 341 IKRGCEPTMHTYIMLLQGHLGKRG---------------RKGPDPLVNFDTIFVGGLVKA 385
G P++ TY L+ G+ K G G P + + G K
Sbjct: 218 KAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKN 277
Query: 386 GKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN----EEGVVMFEEV 429
+ A + E + +G+ YN + + EEGV + EE+
Sbjct: 278 SNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEM 325
>gi|410109869|gb|AFV61014.1| pentatricopeptide repeat-containing protein 11, partial
[Acantholippia seriphioides]
Length = 414
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 136/288 (47%), Gaps = 41/288 (14%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T + L L +++ K + F+ + +CG SL N ++ C+ + A+ + +
Sbjct: 92 TCRKVLEHLMKLKYFKLVWGFYQEILECGYPASLYFFNILMHRFCKEGNIRVAQSVFDAI 151
Query: 170 SEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++W ++P+ ++Y L+ GY +GDL E ++ + M G +P + +I K K
Sbjct: 152 TKWGLRPSVVSYNTLMSGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKEXKM 211
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
DEA ++F M V + G+ T+ +ID CK G++ A + ++M + + D +T ++
Sbjct: 212 DEANELFDEMLVXGLVPXGV-TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNT 270
Query: 289 IIYGLLARGRLREAYKVVEEIE----KPD------------------------------- 313
+IYGL +G L++A+ ++ E+ KPD
Sbjct: 271 LIYGLCKKGBLKQAHVLIXEMSLKGXKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQEN 330
Query: 314 ISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
I L Y LI GL + R+ +A ++ REM+ G +P TY M++
Sbjct: 331 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGXKPDTRTYTMIIN 378
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 99/255 (38%), Gaps = 75/255 (29%)
Query: 74 SITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHI 133
+TF ++D K+ +DL E ++M + L+ D
Sbjct: 230 GVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPD------------------------- 264
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGD 192
L N ++ LC++ + +A LI ++S + KP++I Y LI G C GD
Sbjct: 265 ---------LITYNTLIYGLCKKGBLKQAHVLIXEMSLKGXKPDKITYTTLIDGCCKEGD 315
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
L D FE ++ + I R+DD+ Y
Sbjct: 316 L-----------DTAFEHRKRMIQENI----------------------RLDDVA---YT 339
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK- 311
+I +C+ G+ A ML EM G + D T + II +G + K+++E+++
Sbjct: 340 ALISGLCQEGRSVDAEKMLREMLSVGXKPDTRTYTMIINEFCKKGDVWTGSKLLKEMQRD 399
Query: 312 ---PDISLYHGLIKG 323
P + Y+ L+ G
Sbjct: 400 GHVPSVVTYNVLMNG 414
>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 874
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 177/384 (46%), Gaps = 29/384 (7%)
Query: 80 MVDIIGKSRNIDLFWETLQEMGRRRLVNDKT----FKIALMTLAEVRELKKMVNFFHIMN 135
+V I KS +ID + Q + R R +K + + L + R ++ + + M
Sbjct: 81 VVSIFAKSNHIDKAFPQFQFV-RSRFPENKPGIYLYNVLLESCIRERRVEFVSWLYKDMV 139
Query: 136 DCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLI 194
CG N +++ LC V A+ L ++ E KPNE +G L++GYC G
Sbjct: 140 LCGISPETYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTD 199
Query: 195 EASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIV 254
+ ++ N M G P+ V + ++ +F + ++D++ K+ + MR + + + T+
Sbjct: 200 KGLELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVP-DIVTFNSR 258
Query: 255 IDWMCKRGKISQAYTMLEEM----FKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
I +CK GK+ A + +M + +++T + ++ G G L +A + E I
Sbjct: 259 ISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIR 318
Query: 311 KPD--ISL--YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------- 359
+ D +SL Y+ ++GL+R + EA V ++MI +G P++++Y +L+ G
Sbjct: 319 ENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLS 378
Query: 360 -----LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPR-FDYNKF 413
+G R G P + G GK +DAAK + + M R +P + N
Sbjct: 379 DAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGK-VDAAKSLLQEMMRNNCLPNAYTCNIL 437
Query: 414 LHYYSNEEGVVMFEEVGKKLREVG 437
LH N + EE+ +K+ E G
Sbjct: 438 LHSLWNMGRISEAEELLRKMNEKG 461
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 167/400 (41%), Gaps = 46/400 (11%)
Query: 73 NSITFNRMVD---IIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
NSIT+N M+ +G + +E+++E LV+ +++ I L L + +
Sbjct: 290 NSITYNLMLKGFCKVGLLEDAKTLFESIRE--NDDLVSLQSYNIWLQGLVRHGKFIEAET 347
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYC 188
M D G S+ N ++ LC+ ++ +AK ++ L + P+ + YG L+ GYC
Sbjct: 348 VLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYC 407
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
VG + A + M P+ + ++ + + + + EA ++ + M K L
Sbjct: 408 SVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYG-LDT 466
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEA-----------------------DNLT 285
T I++D +C G++ +A +++ M G A D +T
Sbjct: 467 VTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLIT 526
Query: 286 LSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMI 341
S+++ GL GR EA + E+ +PD Y+ I + + A +V ++M
Sbjct: 527 YSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDME 586
Query: 342 KRGCEPTMHTY------------IMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSL 389
K+GC ++ TY I + G + + KG P + + L + GK
Sbjct: 587 KKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVE 646
Query: 390 DAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEV 429
DA ++ +M + + F + + + M +EV
Sbjct: 647 DATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEV 686
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 153/367 (41%), Gaps = 54/367 (14%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRR-LVNDKTFKIALMTLAEVRELKKMVNFF 131
+++T+ ++ +D LQEM R L N T I L +L + + +
Sbjct: 395 DAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELL 454
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVG 191
MN+ G N +V LC E K EI G + G +G
Sbjct: 455 RKMNEKGYGLDTVTCNIIVDGLCGS-------------GELDKAIEIVKGMRVHGSAALG 501
Query: 192 DLIEASKIWNLMTDEGFE----PSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
+L + L+ D E P + ++ K + EA +F M +++
Sbjct: 502 NL--GNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDS 559
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
L+ Y I I CK+GKIS A+ +L++M K+G T +S+I GL + ++ E + +++
Sbjct: 560 LA-YNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMD 618
Query: 308 EIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
E+ + P+I Y+ I+ L + +AT + EM+++ P + ++ L+
Sbjct: 619 EMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFC--- 675
Query: 364 GRKGPDPLVNFD--------------------TIFVGGLVKAGKSLDAAKYVERVMNRGV 403
K PD FD ++ L+ AG+ L A + +E V++RG
Sbjct: 676 --KVPD----FDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGF 729
Query: 404 EVPRFDY 410
E+ F Y
Sbjct: 730 ELGTFLY 736
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 138/322 (42%), Gaps = 51/322 (15%)
Query: 146 LNKVVKTLCQRKLVVEAKYLI--LKLSEWI---KPNEIAYGWLIKGYCDVGDL------- 193
N + LC+ V++A + ++L E++ +PN I Y ++KG+C VG L
Sbjct: 255 FNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLF 314
Query: 194 ----------------------------IEASKIWNLMTDEGFEPSIDVVDKMIETFFKI 225
IEA + M D+G PSI + +++ K+
Sbjct: 315 ESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKL 374
Query: 226 NKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
+A + +M+ + + TY ++ C GK+ A ++L+EM + + T
Sbjct: 375 GMLSDAKTIVGLMKRNGVSPDAV-TYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYT 433
Query: 286 LSSIIYGLLARGRLREAYKVVEEIEKP----DISLYHGLIKGLLRLRRAREATQVFREMI 341
+ +++ L GR+ EA +++ ++ + D + ++ GL +A ++ + M
Sbjct: 434 CNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMR 493
Query: 342 KRGCEP---TMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERV 398
G ++YI L+ L + PD L+ + T+ + GL KAG+ +A +
Sbjct: 494 VHGSAALGNLGNSYIGLVDDSLIENNCL-PD-LITYSTL-LNGLCKAGRFAEAKTLFAEM 550
Query: 399 MNRGVEVPRFDYNKFLHYYSNE 420
M ++ YN F+H++ +
Sbjct: 551 MGEKLQPDSLAYNIFIHHFCKQ 572
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 93/221 (42%), Gaps = 37/221 (16%)
Query: 126 KMVNFFHIMNDC---GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYG 181
K+ + F ++ D GC SLE N ++ L + + E L+ ++ E I PN Y
Sbjct: 574 KISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYN 633
Query: 182 WLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF------ 235
I+ C+ G + +A+ + + M + P++ +I F K+ D A +VF
Sbjct: 634 TAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFETAVSI 693
Query: 236 -------------------QMMR--------VKRMDDLGLSTYRIVIDWMCKRGKISQAY 268
Q+++ + R +LG Y+ ++ +CK+ ++ A
Sbjct: 694 CGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVAS 753
Query: 269 TMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
+L +M +G D L +I GL G +EA E++
Sbjct: 754 GILHKMIDKGYGFDPAALMPVIDGLGKMGNKKEANNFAEKM 794
>gi|357127305|ref|XP_003565323.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Brachypodium distachyon]
Length = 746
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 164/392 (41%), Gaps = 63/392 (16%)
Query: 37 LTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKS---RNIDLF 93
+TH F FPL + FF ++ + A ++FN ++ + S RN L+
Sbjct: 234 ITHHSFNSALLRFPLPPHLLPAFFSHSLRRFTRLAPTLLSFNLLLKCVCSSLVPRNHQLY 293
Query: 94 WETLQEMGRR-----RLVNDK-TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLN 147
E + R +LV DK T+ + LA+ + V H M G
Sbjct: 294 LELALRVVHRSIPAWKLVPDKFTYSTVVSALADAGRVDDAVALVHEMVVDG--------- 344
Query: 148 KVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEG 207
VV A+ A+ ++ GD+ A+K+++ M +G
Sbjct: 345 -----------VVAAE---------------AFNPVLGAMLRTGDVTGAAKLFSFMQLKG 378
Query: 208 FEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL-GLSTYRIVIDWMCKRGKISQ 266
PS + ++ + AM V M R++R + + G+ TY V+D + + G++
Sbjct: 379 CAPSAATYNVLLHGLLLCGRAKAAMGV--MRRMERAEVVPGVMTYGAVVDGLVRCGRLED 436
Query: 267 AYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV----VEEIEKPDISLYHGLIK 322
A ++EEM +G+ + S +I G G + A +V V KP++ LY +I
Sbjct: 437 ACKVIEEMRSKGLVPNEFVFSPVITGFCKLGEVDRASRVWDTMVAAGIKPNVVLYSAMID 496
Query: 323 GLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH--LGKRG----------RKGPDP 370
GL R + EA +FREMI+ C P + TY +++G+ +G R G P
Sbjct: 497 GLARCGKMTEAELLFREMIEAKCVPNIMTYSSMVRGYFQIGDSSQALSFWEDMLRIGCTP 556
Query: 371 LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
++ + GL G+S DA + ++ RG
Sbjct: 557 NAVTYSVLINGLCNVGRSKDAMMVWKHMLGRG 588
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 99/197 (50%), Gaps = 8/197 (4%)
Query: 170 SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD 229
S+ + PNE + +I G+C +G++ AS++W+ M G +P++ + MI+ + K
Sbjct: 446 SKGLVPNEFVFSPVITGFCKLGEVDRASRVWDTMVAAGIKPNVVLYSAMIDGLARCGKMT 505
Query: 230 EAMKVF-QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
EA +F +M+ K + + + TY ++ + G SQA + E+M + G + +T S
Sbjct: 506 EAELLFREMIEAKCVPN--IMTYSSMVRGYFQIGDSSQALSFWEDMLRIGCTPNAVTYSV 563
Query: 289 IIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+I GL GR ++A V + + PD Y +IKG ++F +M+ RG
Sbjct: 564 LINGLCNVGRSKDAMMVWKHMLGRGCVPDTIAYTSMIKGFCVSGMVDAGLRLFYDMLARG 623
Query: 345 -CEPTMHTYIMLLQGHL 360
P + Y +LL G L
Sbjct: 624 DTHPDVICYNVLLDGLL 640
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 76/184 (41%), Gaps = 14/184 (7%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
PN + Y LI G C+VG +A +W M G P MI+ F D +++
Sbjct: 556 PNAVTYSVLINGLCNVGRSKDAMMVWKHMLGRGCVPDTIAYTSMIKGFCVSGMVDAGLRL 615
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
F M + + Y +++D + + + +A +L +M + + D +T ++
Sbjct: 616 FYDMLARGDTHPDVICYNVLLDGLLRAKDLPRAMDLLNQMLDQACDPDTVTCNTF----- 670
Query: 295 ARGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIM 354
LRE E+ + GL+ L +R + A +V M+ + P M
Sbjct: 671 ----LREI-----EVGQKGQEFLEGLVVRLCNRKRNKAAGEVLMVMLAKYIVPEAAVLEM 721
Query: 355 LLQG 358
+++G
Sbjct: 722 VVRG 725
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 66/148 (44%), Gaps = 15/148 (10%)
Query: 282 DNLTLSSIIYGLLARGRLREAYKVVEEIEKPDI---SLYHGLIKGLLRLRRAREATQVFR 338
D T S+++ L GR+ +A +V E+ + ++ ++ +LR A ++F
Sbjct: 313 DKFTYSTVVSALADAGRVDDAVALVHEMVVDGVVAAEAFNPVLGAMLRTGDVTGAAKLFS 372
Query: 339 EMIKRGCEPTMHTYIMLLQGHL------------GKRGRKGPDPLVNFDTIFVGGLVKAG 386
M +GC P+ TY +LL G L + R P V V GLV+ G
Sbjct: 373 FMQLKGCAPSAATYNVLLHGLLLCGRAKAAMGVMRRMERAEVVPGVMTYGAVVDGLVRCG 432
Query: 387 KSLDAAKYVERVMNRGVEVPRFDYNKFL 414
+ DA K +E + ++G+ F ++ +
Sbjct: 433 RLEDACKVIEEMRSKGLVPNEFVFSPVI 460
>gi|449438586|ref|XP_004137069.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 164/367 (44%), Gaps = 22/367 (5%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
+S +FN +D++ KS N+D W E R + +F I + E + K
Sbjct: 72 SSFSFNNALDLLAKSGNLDRTWGFFTEYLGRTQFDVYSFGITIKAFCENGNVSKGFELLA 131
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVG 191
M G ++ + +++ C+ + +AK + ++ + + N+ Y +I G+ G
Sbjct: 132 QMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKG 191
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTY 251
+ +++ M G P++ + +I + + K A KVF + KR TY
Sbjct: 192 YKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEIS-KRGVACNAVTY 250
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK 311
I+I +C++G++S+A +LE M + I T + ++ GL G+L +A +E+++
Sbjct: 251 NILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKL 310
Query: 312 ----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG--------- 358
P + Y+ LI G ++ + +++ REM RG P+ TY +L+
Sbjct: 311 IGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEK 370
Query: 359 -----HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
HL KR PD + + + GL G ++A+K + ++ ++ YN
Sbjct: 371 AYEMFHLMKRIGLVPDQ--HTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTM 428
Query: 414 LHYYSNE 420
++ Y E
Sbjct: 429 INGYCKE 435
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 122/269 (45%), Gaps = 37/269 (13%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N ++ LC++ V +A+ L+ ++ I P + L+ G C+ G L +A +
Sbjct: 251 NILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKL 310
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKR 261
G P++ + +I F K+ ++ V+ M+D G+S TY I+++ +
Sbjct: 311 IGLCPTLVTYNILISGFSKVGNSSVVSEL-----VREMEDRGISPSKVTYTILMNTFVRS 365
Query: 262 GKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV----VEEIEKPDISLY 317
I +AY M M + G+ D T +I+GL +G + EA K+ VE +P+ +Y
Sbjct: 366 DDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIY 425
Query: 318 HGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTI 377
+ +I G + + +A + EM+K G P + +YI +Q
Sbjct: 426 NTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQ-------------------- 465
Query: 378 FVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
L K GKS++A + ++ + G++ P
Sbjct: 466 ---ILCKDGKSIEAKRLLKEMTEAGLKPP 491
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 118/269 (43%), Gaps = 36/269 (13%)
Query: 179 AYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
++G IK +C+ G++ + ++ M G P++ + +IE + D+A +F
Sbjct: 109 SFGITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFS-- 166
Query: 239 RVKRMDDLGLST----YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
RMDDLGL+ Y I+I+ K+G + + ++M G+ + T +S+I
Sbjct: 167 ---RMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYC 223
Query: 295 ARGRLREAYKVVEEIEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
G+L A+KV +EI K ++ Y+ LI GL R + +A + M + PT
Sbjct: 224 RDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTR 283
Query: 351 TYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY 410
T+ ML+ G L G+ A Y+E++ G+ Y
Sbjct: 284 TFNMLMDG-----------------------LCNTGQLDKALSYLEKLKLIGLCPTLVTY 320
Query: 411 NKFLHYYSNEEGVVMFEEVGKKLREVGLA 439
N + +S + E+ +++ + G++
Sbjct: 321 NILISGFSKVGNSSVVSELVREMEDRGIS 349
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 91/207 (43%), Gaps = 36/207 (17%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+T+N ++ K N + E ++EM R + K T+ I + T +++K FH+
Sbjct: 318 VTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHL 377
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDL 193
M G + P++ YG LI G C G++
Sbjct: 378 MKRIG----------------------------------LVPDQHTYGVLIHGLCIKGNM 403
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
+EASK++ M + +P+ + + MI + K +A+K + M VK +++Y
Sbjct: 404 VEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEM-VKNGVTPNVASYIS 462
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIE 280
I +CK GK +A +L+EM + G++
Sbjct: 463 TIQILCKDGKSIEAKRLLKEMTEAGLK 489
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/401 (23%), Positives = 158/401 (39%), Gaps = 54/401 (13%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIM 134
T++ ++ +G+ R+ + L+EM L N T+ I + L + M
Sbjct: 229 TYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTM 288
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDL 193
D GC + ++ LC + +AK L K+ + KP+ + Y L+ + + GDL
Sbjct: 289 EDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDL 348
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK------------ 241
+ W+ M +G+ P + ++E K K D+A + +MRV+
Sbjct: 349 ETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTL 408
Query: 242 ------------------RMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGI 279
M+ LG++ +Y + ID+ K G +A E+M KRGI
Sbjct: 409 ISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGI 468
Query: 280 EADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQ 335
++ +Y L GR+REA + +I PD Y+ ++K + + +AT+
Sbjct: 469 MPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATK 528
Query: 336 VFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGP-------------DPLVNFDTIFVGGL 382
+ EM+ GCEP + L+ L K GR P V I + GL
Sbjct: 529 LLTEMLSEGCEPDIIVVNSLID-TLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGL 587
Query: 383 VKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGV 423
K GK L A + G +N L + V
Sbjct: 588 GKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAV 628
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 140/294 (47%), Gaps = 17/294 (5%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
N T+N ++D GKS+ ID +E EM R N T I + L + + K ++ +
Sbjct: 822 NIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLY 881
Query: 132 H--IMND---CGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIK 185
+ I D C Y ++ L + EA + ++ ++ KPN Y LI
Sbjct: 882 YEIISGDFSPTPCTYG-----PLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILIN 936
Query: 186 GYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD 245
G+ G++ A ++ M EG P + ++E F + D+A+ F+ +++ +D
Sbjct: 937 GFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDP 996
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
+S Y ++I+ + K ++ +A ++ EM RGI + T +++I G + +A K+
Sbjct: 997 DTVS-YNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKM 1055
Query: 306 VEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
EE++ +P++ Y+ LI+G + A VF++M+ GC P T+ L
Sbjct: 1056 FEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQL 1109
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 137/307 (44%), Gaps = 24/307 (7%)
Query: 149 VVKTLCQRKLVVEAKYLILKLSEWI--KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDE 206
+++ LC++K ++AK L K ++ + P +Y L+ G A K++ M +
Sbjct: 758 LIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNA 817
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQ 266
G P+I + +++ K + DE +++ M + + T+ I+I + K I++
Sbjct: 818 GCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKP-NIITHNIIISALVKSNSINK 876
Query: 267 AYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIK 322
A + E+ T +I GLL GR EA K+ EE+ KP+ ++Y+ LI
Sbjct: 877 ALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILIN 936
Query: 323 GLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR-------------KGPD 369
G + A +F+ MIK G P + +Y +L++ L GR G D
Sbjct: 937 GFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVE-CLFMTGRVDDAVHYFEELKLTGLD 995
Query: 370 PLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEV 429
P + + GL K+ + +A + NRG+ + YN + ++ N M ++
Sbjct: 996 PDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAG---MVDQA 1052
Query: 430 GKKLREV 436
GK E+
Sbjct: 1053 GKMFEEL 1059
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 152/341 (44%), Gaps = 52/341 (15%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMV 128
+A + +T+ +V+ + KS +D ++ L M R +V N T+ + L +R L + +
Sbjct: 363 YAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEAL 422
Query: 129 NFFHIMNDCGC--------------------EYSLEMLNKVVK---------------TL 153
F+ M G E +L+ K+ K +L
Sbjct: 423 ELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSL 482
Query: 154 CQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSI 212
+ + EAK + + + P+ + Y ++K Y G + +A+K+ M EG EP I
Sbjct: 483 AEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDI 542
Query: 213 DVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAY 268
VV+ +I+T +K + DEA ++F R+ DL L+ TY I+I + K GK+ +A
Sbjct: 543 IVVNSLIDTLYKAGRVDEAWQMFG-----RLKDLKLAPTVVTYNILITGLGKEGKLLKAL 597
Query: 269 TMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGL 324
+ M + G + +T ++++ L + A K+ + PD+ Y+ +I GL
Sbjct: 598 DLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGL 657
Query: 325 LRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
++ RA A + +M K+ P T LL G + K GR
Sbjct: 658 IKEGRAGYAFWFYHQM-KKFLSPDHVTLYTLLPGVV-KDGR 696
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 117/287 (40%), Gaps = 28/287 (9%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
L KPN I + +I + +A ++ + F P+ +I K +
Sbjct: 850 LCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRS 909
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
+EAMK+F+ M + + Y I+I+ K G ++ A + + M K GI D + +
Sbjct: 910 EEAMKIFEEMPDYQCKP-NCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTI 968
Query: 289 IIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
++ L GR+ +A EE++ PD Y+ +I GL + RR EA +F EM RG
Sbjct: 969 LVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRG 1028
Query: 345 CEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVE 404
P ++TY L+ H G AG A K E + G+E
Sbjct: 1029 ISPELYTYNALIL-HFG----------------------NAGMVDQAGKMFEELQFMGLE 1065
Query: 405 VPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLADIFQRYGKK 451
F YN + +S V KK+ VG + A F + K
Sbjct: 1066 PNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQLPNK 1112
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 137/322 (42%), Gaps = 58/322 (18%)
Query: 96 TLQEMGRRRLVND--------------KTFKIALMTLAEVRELKKMVNFFHIMNDCGCEY 141
+L EMGR R D T+ + + ++ ++ K M GCE
Sbjct: 481 SLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEP 540
Query: 142 SLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIW 200
+ ++N ++ TL + V EA + +L + + P + Y LI G G L++A ++
Sbjct: 541 DIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLF 600
Query: 201 NLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCK 260
M + G P+ + +++ K + D A+K+F M + + TY +I + K
Sbjct: 601 GSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSP-DVLTYNTIIYGLIK 659
Query: 261 RGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV-------------- 306
G+ A+ +M K+ + D++TL +++ G++ GR+ +A K+V
Sbjct: 660 EGRAGYAFWFYHQM-KKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQ 718
Query: 307 ------------EEIEKP--------------DISLYHGLIKGLLRLRRAREATQVFREM 340
EIE+ D +L LI+ L + ++A +A ++F +
Sbjct: 719 VWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKF 778
Query: 341 IKR-GCEPTMHTYIMLLQGHLG 361
K G PT +Y L+ G LG
Sbjct: 779 TKSLGTHPTPESYNCLMDGLLG 800
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 119/282 (42%), Gaps = 36/282 (12%)
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
N + Y L G+C EA K++ M EG +PS+ ++ + M +
Sbjct: 196 NGLIYFLLQPGFCK-----EALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLL 250
Query: 236 QMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
+ M+ LGL TY I I + + G+I AY +L+ M G D +T + +I
Sbjct: 251 E-----EMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLID 305
Query: 292 GLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
L A G+L +A ++ ++ KPD+ Y L+ + + EM G P
Sbjct: 306 ALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAP 365
Query: 348 TMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKY 394
+ TY +L++ L K G+ +G P ++ + GL+ + +A +
Sbjct: 366 DVVTYTILVEA-LCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALEL 424
Query: 395 VERVMNRGVEVPRFDYNKFLHYYSN----EEGVVMFEEVGKK 432
+ + GV + Y F+ YY E+ + FE++ K+
Sbjct: 425 FNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKR 466
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 92/199 (46%), Gaps = 22/199 (11%)
Query: 213 DVVDKMIETFFKINKDDEAMK-VFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTML 271
+ + M+E F +++ E M VF +M+ K++ + +TY + + +G I QA L
Sbjct: 123 ETCNYMLE-FLRVHGRVEDMAFVFDLMQ-KQVINRNPNTYLTIFKALSIKGGIRQAPFAL 180
Query: 272 EEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV----VEEIEKPDISLYHGLIKGLLRL 327
+M + G + + + +IY LL G +EA KV + E KP + Y L+ L R
Sbjct: 181 GKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRR 240
Query: 328 RRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR-------------KGPDPLVNF 374
R + EM G P ++TY + ++ LG+ GR +G P V
Sbjct: 241 RDTGTIMDLLEEMETLGLRPNIYTYTICIR-VLGRAGRIDDAYGILKTMEDEGCGPDVVT 299
Query: 375 DTIFVGGLVKAGKSLDAAK 393
T+ + L AGK LD AK
Sbjct: 300 YTVLIDALCAAGK-LDKAK 317
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 76/150 (50%), Gaps = 9/150 (6%)
Query: 224 KINKDDEAMKVFQMMRVKRMDDLGLS--TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEA 281
I+ + A+ F+M V ++ ++ + T +++++ G++ + + M K+ I
Sbjct: 98 SISDPNSALSYFKM--VSQLPNIVHTPETCNYMLEFLRVHGRVEDMAFVFDLMQKQVINR 155
Query: 282 DNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISL----YHGLIKGLLRLRRAREATQVF 337
+ T +I L +G +R+A + ++ + L Y+GLI LL+ +EA +V+
Sbjct: 156 NPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVY 215
Query: 338 REMIKRGCEPTMHTYIMLLQGHLGKRGRKG 367
+ MI G +P+M TY L+ LG+R G
Sbjct: 216 KRMISEGLKPSMKTYSALMVA-LGRRRDTG 244
>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
Length = 855
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 143/314 (45%), Gaps = 30/314 (9%)
Query: 76 TFNRMVDIIGKSRNID---LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
T+ ++D K+ I+ +E ++ +G V T+ + + +++ + + FH
Sbjct: 325 TYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTV--VTYTALIHAYLKAKQVPQANDIFH 382
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-----------------SEWIKP 175
M D GC + +V LC+ + +A + KL + P
Sbjct: 383 RMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAP 442
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
N + YG L+ G C + A ++ + M G EP+ V D +I+ F K K D A +VF
Sbjct: 443 NVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 502
Query: 236 -QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
QM + + + TY +ID M K G++ A +L +M K + +T +++I GL
Sbjct: 503 LQMTKCGYLPS--VHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLC 560
Query: 295 ARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
G +A K++ +E+ P++ Y LI GL + + + +F +M ++GC P
Sbjct: 561 RIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYV 620
Query: 351 TYIMLLQGHLGKRG 364
TY +L+ HL G
Sbjct: 621 TYRVLIN-HLCAAG 633
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 153/354 (43%), Gaps = 39/354 (11%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFF 131
N F R + +GK D ++ ++EM R+ V D T+ + L +++K F
Sbjct: 255 NVANFARCLCGVGK---FDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLF 311
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
M G + ++ + C+ L+ +A++L ++ S P + Y LI Y
Sbjct: 312 QEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKA 371
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDL--- 246
+ +A+ I++ M D G P+ +++ K +A +V+ +++ D
Sbjct: 372 KQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFY 431
Query: 247 -----------GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
+ TY ++D +CK K+ A+ +L+ M G E +++ ++I G
Sbjct: 432 FPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCK 491
Query: 296 RGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
G++ A +V ++ K P + Y LI + + R A +V +M+K C P + T
Sbjct: 492 AGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVT 551
Query: 352 YIMLLQG--HLGKRGR----------KGPDPLVNFDTIFVGGLVKAGK---SLD 390
Y ++ G +G+ + KG P V T + GL KAGK SLD
Sbjct: 552 YTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLD 605
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 141/337 (41%), Gaps = 47/337 (13%)
Query: 68 PC-----FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEV 121
PC A N +T+ +VD + K+ +D E L M + AL+ +
Sbjct: 433 PCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKA 492
Query: 122 RELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQR-KLVVEAKYLILKLSEWIKPNEIAY 180
++ F M CG S+ ++ + + +L + K L L + PN + Y
Sbjct: 493 GKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTY 552
Query: 181 GWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
+I G C +G+ +A K+ +LM ++G P++ +I+ K K D ++ +F M
Sbjct: 553 TAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSR 612
Query: 241 KRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEM------------------FKRGIEAD 282
K TYR++I+ +C G + +A +L EM F + A
Sbjct: 613 KGCSP-NYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIAS 671
Query: 283 NLTLSSI----------IYGLL-----ARGRLREAYKVVEEIE------KPDISLYHGLI 321
L + +YG+L GRL A ++ +E+ K D +Y LI
Sbjct: 672 LGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLI 731
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+ L + EA +++ EM +RG P + ++ L++G
Sbjct: 732 QALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKG 768
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 135/334 (40%), Gaps = 49/334 (14%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK----TFKIALMT----------- 117
+ +T+N +V ++ + +DL + +EM D+ F AL
Sbjct: 39 SKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDMI 98
Query: 118 ------------------LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLV 159
L E + ++F H M C ++ ++ ++K +
Sbjct: 99 EREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQL 158
Query: 160 VEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKM 218
K +I + ++E PN + L+ YC+ D A K+ N MT G P V +
Sbjct: 159 GWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIF 218
Query: 219 IETFFKINK------DDEAMKVFQMMRVKR--MDDLGLSTYRIVIDWMCKRGKISQAYTM 270
I + K D A K++ M ++ + ++ + +C GK +A+ +
Sbjct: 219 IGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFA---RCLCGVGKFDKAFQL 275
Query: 271 LEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLR 326
++EM ++G D T S +I L ++ +A+ + +E++ PD+ Y LI +
Sbjct: 276 IKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCK 335
Query: 327 LRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL 360
+A +F EM GC PT+ TY L+ +L
Sbjct: 336 AGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYL 369
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 130/315 (41%), Gaps = 19/315 (6%)
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-------LSEWIKPNEIAYGWLIKG 186
M CGC + N + ++C ++ + L L L+ N++ +
Sbjct: 203 MTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARC 262
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
C VG +A ++ M +GF P K+I K ++A +FQ M++ +
Sbjct: 263 LCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTP- 321
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA---- 302
+ TY I+ID CK G I QA + EEM G +T +++I+ L ++ +A
Sbjct: 322 DVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIF 381
Query: 303 YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
+++V+ +P+ Y L+ GL + +A +V+ ++I Y
Sbjct: 382 HRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPC------- 434
Query: 363 RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEG 422
R P V V GL KA K A + ++ +++ G E Y+ + +
Sbjct: 435 EDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGK 494
Query: 423 VVMFEEVGKKLREVG 437
+ +EV ++ + G
Sbjct: 495 IDSAQEVFLQMTKCG 509
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 133/332 (40%), Gaps = 60/332 (18%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
N +T+ +VD + K+ NI +E ++ D F +F
Sbjct: 392 NDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDF------------------YFP 433
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVG 191
+ ++ +V LC+ V A L+ LS +PN I Y LI G+C G
Sbjct: 434 CEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAG 493
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMR----------- 239
+ A +++ MT G+ PS+ +I+ FK + D AMKV QM++
Sbjct: 494 KIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYT 553
Query: 240 ------------------VKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKR 277
+ M++ G S TY +ID + K GKI + + +M ++
Sbjct: 554 AMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRK 613
Query: 278 GIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK---PD-ISLYHGLIKGLLRLRRAREA 333
G + +T +I L A G L +A ++ E+++ P + Y I+G + A +
Sbjct: 614 GCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIA--S 671
Query: 334 TQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
+ EM G P Y ML+ K GR
Sbjct: 672 LGILEEMESYGTVPIAPVYGMLIDC-FSKAGR 702
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 122/276 (44%), Gaps = 25/276 (9%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHIM 134
T+ ++D + K +DL + L +M + N T+ + L + E +K + +M
Sbjct: 516 TYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLM 575
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDL 193
+ GC ++ ++ L + + + L ++S + PN + Y LI C G L
Sbjct: 576 EEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLL 635
Query: 194 IEASKIWNLMTD-------EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
+A + M +G+ +I K I ++ E+ + V
Sbjct: 636 DKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPV------ 689
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFK--RGIEADNLTLSSIIYGLLARGRLREAYK 304
Y ++ID K G++ A + +EM + ++ DN +S+I L ++ EA++
Sbjct: 690 ----YGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFR 745
Query: 305 VVEEIEK----PDISLYHGLIKGLLRLRRAREATQV 336
+ E+ + P++S++ LIKGL+ +++ EA Q+
Sbjct: 746 LYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 781
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 1/115 (0%)
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE-E 308
TY ++ + G++ + + +EM + G D T+ + L GR +A ++E E
Sbjct: 42 TYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDMIERE 101
Query: 309 IEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
K D L +I GL+ EA M C P + TY LL G L K+
Sbjct: 102 DFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKK 156
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 32/169 (18%), Positives = 68/169 (40%), Gaps = 16/169 (9%)
Query: 203 MTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDW----M 258
+ D G+ PS + +++ + D +V K M + G R + +
Sbjct: 31 LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRV-----QKEMSESGFCMDRFTVGCFAHAL 85
Query: 259 CKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDI 314
CK G+ + A M+E + + D + + +I GL+ EA + + P++
Sbjct: 86 CKEGRWADALDMIE---REDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNV 142
Query: 315 SLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
Y L+ G L+ ++ ++ M+ GC P + L+ + ++
Sbjct: 143 VTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEK 191
>gi|410109883|gb|AFV61021.1| pentatricopeptide repeat-containing protein 11, partial
[Burroughsia fastigiata]
Length = 431
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 140/301 (46%), Gaps = 46/301 (15%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T + L L +++ K + F+ +CG SL N + C+ + A+ + +
Sbjct: 109 TCRKVLEHLMKLKYFKLVWGFYEEFLECGYPASLYFFNILXHRFCKEGDIRVAQSVFDAI 168
Query: 170 SEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++W ++P+ ++Y L+ GY +GDL E K+ + M G P + +I K +K
Sbjct: 169 TKWGLRPSVVSYNTLMNGYIRLGDLDEGFKLKSAMHASGVXPDVYTYSVLINGLCKESKM 228
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
D A ++F M VK + G+ T+ +ID CK G++ A + ++M + + D +T ++
Sbjct: 229 DXANELFDEMLVKGLVPNGV-TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNT 287
Query: 289 IIYGLLARGRLREAYKVVEEIE----KPD------------------------------- 313
+IYGL +G L +A+ +++E+ KPD
Sbjct: 288 LIYGLCKKGDLNQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQEN 347
Query: 314 ISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL-----QGHLGKRG 364
I L Y LI GL + R+ +A ++ REM+ G +P TY M++ +G +GK
Sbjct: 348 IRLDDVAYTALISGLCQEGRSVDAEKMMREMLSVGLKPDTGTYTMIINEVCKKGDVGKGS 407
Query: 365 R 365
+
Sbjct: 408 K 408
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 95/227 (41%), Gaps = 43/227 (18%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
N +TF ++D K+ +DL E ++M + L+ D
Sbjct: 246 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPD------------------------ 281
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVG 191
L N ++ LC++ + +A LI ++S + +KP++I Y LI G C G
Sbjct: 282 ----------LITYNTLIYGLCKKGDLNQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEG 331
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLST 250
DL A + M E +I + + +A K+ +M+ V D G T
Sbjct: 332 DLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSVGLKPDTG--T 389
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
Y ++I+ +CK+G + + +L+EM + D S + Y +L G
Sbjct: 390 YTMIINEVCKKGDVGKGSKLLKEM-----QXDGHAPSVVTYNVLMNG 431
>gi|255660846|gb|ACU25592.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 418
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 103/193 (53%), Gaps = 7/193 (3%)
Query: 170 SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD 229
+ ++P+ Y LI G C + EA+ ++N M D+G P+ +I+ K K D
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFTTLIDGHCKNGKVD 258
Query: 230 EAMKVF-QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
AM+ + QM+ + DL TY +I +CK+G + QA +L+EM +G++ D +T ++
Sbjct: 259 SAMETYKQMLSQCFLPDL--ITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKITYTT 316
Query: 289 IIYGLLARGRLREAYKVVEEIEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRG 344
+I G G L A+++ E + K I L Y LI GL + RA +A ++ REM+ G
Sbjct: 317 LIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRATDAEKMLREMLSVG 376
Query: 345 CEPTMHTYIMLLQ 357
+P TY M++
Sbjct: 377 LKPDNGTYTMIIN 389
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 117/255 (45%), Gaps = 9/255 (3%)
Query: 102 RRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVE 161
R +V+ T + L ++ + K+ N H G + + + ++ LC+ + E
Sbjct: 168 RPSVVSFNTLMNGYIRLGDLDQGFKLKNAMHA---SGVQPDVYTYSVLINGLCKESKMNE 224
Query: 162 AKYLILK-LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIE 220
A L + L + + PN + + LI G+C G + A + + M + F P + + +I
Sbjct: 225 ANDLFNEMLDKGLVPNGVTFTTLIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIY 284
Query: 221 TFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIE 280
K +A + MR+K + + TY +ID CK G + A+ + E M K I
Sbjct: 285 GLCKKGDLKQAQDLLDEMRMKGLKPDKI-TYTTLIDGNCKEGDLDSAFELRETMVKESIR 343
Query: 281 ADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQV 336
D++ +++I GL GR +A K++ E+ KPD Y +I + + A ++
Sbjct: 344 LDDVAYTALISGLCQEGRATDAEKMLREMLSVGLKPDNGTYTMIINEFCKKEDVKTAAKL 403
Query: 337 FREMIKRGCEPTMHT 351
+EM ++G P + T
Sbjct: 404 LKEMQRQGHVPCVVT 418
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 136/318 (42%), Gaps = 54/318 (16%)
Query: 141 YSLEMLNKVVKTLCQRKLVVEAKYLI-------------------LKLSEWIKPNEIAYG 181
++L ++ LC ++++EAK LI L+ + + +
Sbjct: 11 HTLHTYCTMIHFLCTHQMLLEAKSLIQIVVSRKGKDSASAVFAAILETKGTQRSDIYVFS 70
Query: 182 WLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM--R 239
LI Y + G + +A + + L + D K++E K +K F+++
Sbjct: 71 GLINAYLESGFVRDAIECFRLTREHKLRVPFDTCRKVLEHLMK-------LKYFKLVWGF 123
Query: 240 VKRMDDLG----LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
K + + G L + I++ CK G+I A ++ + + K G+ ++ ++++ G +
Sbjct: 124 YKEILECGYPASLYFFNILMHRFCKEGEIWIAQSVFDSITKWGLRPSVVSFNTLMNGYIR 183
Query: 296 RGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
G L + +K+ + +PD+ Y LI GL + + EA +F EM+ +G P T
Sbjct: 184 LGDLDQGFKLKNAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVT 243
Query: 352 YIMLLQGHLGKRGRKG---------------PDPLVNFDTIFVGGLVKAGKSLDAAKYVE 396
+ L+ GH K G+ PD L+ ++T+ + GL K G A ++
Sbjct: 244 FTTLIDGHC-KNGKVDSAMETYKQMLSQCFLPD-LITYNTL-IYGLCKKGDLKQAQDLLD 300
Query: 397 RVMNRGVEVPRFDYNKFL 414
+ +G++ + Y +
Sbjct: 301 EMRMKGLKPDKITYTTLI 318
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 95/240 (39%), Gaps = 71/240 (29%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
N +TF ++D K+ +D ET ++M + + D
Sbjct: 240 NGVTFTTLIDGHCKNGKVDSAMETYKQMLSQCFLPD------------------------ 275
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVG 191
L N ++ LC++ + +A+ L+ ++ + +KP++I Y LI G C G
Sbjct: 276 ----------LITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKITYTTLIDGNCKEG 325
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTY 251
DL A ++ M E R+DD+ Y
Sbjct: 326 DLDSAFELRETMVKESI---------------------------------RLDDVA---Y 349
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK 311
+I +C+ G+ + A ML EM G++ DN T + II + ++ A K+++E+++
Sbjct: 350 TALISGLCQEGRATDAEKMLREMLSVGLKPDNGTYTMIINEFCKKEDVKTAAKLLKEMQR 409
>gi|225464410|ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic [Vitis vinifera]
Length = 929
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 140/294 (47%), Gaps = 7/294 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGR-RRLVNDKTFKIALMTLAEVRELKKMVNFFHI 133
+ +N ++ N+D T++EM + R +TF + A ++++ + F +
Sbjct: 535 VLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDM 594
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGD 192
M GC ++ N ++ L ++ + +A ++ ++S I PNE Y ++ GY +GD
Sbjct: 595 MRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGD 654
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+A + + + EG E + + +++ K + A+ V + M +++ Y
Sbjct: 655 TGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTF-VYN 713
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
I+ID +RG + +A ++++M + G++ D T +S I G ++ A K ++E+E
Sbjct: 714 ILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVV 773
Query: 311 --KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
KP+I Y LI G R +A + F+EM G +P Y L+ L +
Sbjct: 774 GVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLMTSLLSR 827
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 88/426 (20%), Positives = 166/426 (38%), Gaps = 60/426 (14%)
Query: 42 FLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMG 101
F ++ P +W+ V F+ +K + F MV + ++ T + M
Sbjct: 263 FRKVLETEPENWQAVVQAFERIKKP------SRKEFGLMVTYYARRGDMHHARGTFESMR 316
Query: 102 RRRLVNDKTFKIALMTLAEV-RELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVV 160
R + +L+ V R++++ ++ M + G E SL + +V +
Sbjct: 317 ARGIEPTSHVYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAE 376
Query: 161 EAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKM- 218
A + + E N I YG +I +C ++ +A + M +EG + ID+ M
Sbjct: 377 AADHWFKEAKERHTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMM 436
Query: 219 ----------------------------------IETFFKINKDDEAMKVFQMMRVKRMD 244
I + KI K +A++V +MM V +
Sbjct: 437 DGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIK 496
Query: 245 DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK 304
+ TY ++I+ + + A+ + E++ K G++ D + ++II G + A +
Sbjct: 497 H-NMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIR 555
Query: 305 VVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH- 359
V+E++K P + +I G R R A ++F M GC PT+HT+ L+ G
Sbjct: 556 TVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLV 615
Query: 360 -----------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRF 408
L + G P + T + G G + A +Y ++ G+E+ +
Sbjct: 616 EKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVY 675
Query: 409 DYNKFL 414
Y L
Sbjct: 676 TYEALL 681
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 117/263 (44%), Gaps = 19/263 (7%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
+KP+ + Y +I+ +C +G++ A + M E P+ +I F + A+
Sbjct: 530 LKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRAL 589
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
++F MMR + T+ +I + ++ ++ +A +L+EM GI + T ++I++G
Sbjct: 590 EIFDMMRWSGCIPT-VHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHG 648
Query: 293 LLARGRLREAYKVVEEIEKP----DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
+ G +A++ +++ D+ Y L+K + R + A V REM +
Sbjct: 649 YASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRN 708
Query: 349 MHTYIMLLQGHLGKRG-------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYV 395
Y +L+ G +RG ++G P ++ T F+ KAG A K +
Sbjct: 709 TFVYNILIDG-WARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTI 767
Query: 396 ERVMNRGVEVPRFDYNKFLHYYS 418
+ + GV+ Y +H ++
Sbjct: 768 QEMEVVGVKPNIKTYTTLIHGWA 790
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 93/230 (40%), Gaps = 3/230 (1%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHIM 134
TFN ++ + + ++ E L EM + N+ T+ + A + + K +F +
Sbjct: 606 TFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKL 665
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKP-NEIAYGWLIKGYCDVGDL 193
G E + ++K C+ + A + ++S P N Y LI G+ GD+
Sbjct: 666 KTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDV 725
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
EA+++ M EG +P I I K A K Q M V + + TY
Sbjct: 726 WEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGVKP-NIKTYTT 784
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
+I + +A +EM G++ D ++ LL+R + E Y
Sbjct: 785 LIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLMTSLLSRASVAEEY 834
>gi|410109867|gb|AFV61013.1| pentatricopeptide repeat-containing protein 11, partial
[Acantholippia salsoloides]
Length = 410
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 155/333 (46%), Gaps = 29/333 (8%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T K L L +++ K + F+ + +CG SL N ++ C+ + A+ + +
Sbjct: 95 TCKKVLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIRVARSVFDAI 154
Query: 170 SEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++W ++P+ +++ L+ GY +GDL E ++ + M G EP + +I K +K
Sbjct: 155 TKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVEPDVYTYSVLINGLCKESKI 214
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
D A ++F M K + G+ T+ +ID CK G++ A + ++M + + AD +T ++
Sbjct: 215 DGANELFDEMLDKGLVPNGV-TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNT 273
Query: 289 IIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+IYGL +G L++A +++E+ KPD Y LI G + A + + MI+
Sbjct: 274 LIYGLCKKGDLKQAQNLIDEMRMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQEN 333
Query: 345 CEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVE 404
Y T + GL + G+S+DA K + +++ G++
Sbjct: 334 IRLDDVVY-----------------------TTLISGLCQEGRSVDAEKMLREMLSVGLK 370
Query: 405 VPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVG 437
Y ++ + + V ++ K+++ G
Sbjct: 371 PDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 403
Score = 42.0 bits (97), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 37/177 (20%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVN-- 129
N +TF ++D K+ +DL E ++M + L D T+ + L + +LK+ N
Sbjct: 232 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLI 291
Query: 130 --------------FFHIMNDCGCEYSLEM--------------LNKVVKT-----LCQR 156
+ +++ C E LE L+ VV T LCQ
Sbjct: 292 DEMRMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVVYTTLISGLCQE 351
Query: 157 KLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSI 212
V+A+ ++ + LS +KP+ Y +I +C GD+ SK+ M +G PS+
Sbjct: 352 GRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSV 408
>gi|410109949|gb|AFV61054.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
turbinata]
Length = 413
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 136/288 (47%), Gaps = 41/288 (14%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T + L L ++R K + F+ + +CG SL N ++ C+ + A+ + +
Sbjct: 91 TCRKMLEHLMKLRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAI 150
Query: 170 SEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++W ++P+ ++Y L+ GY +GDL E ++ + M G +P + +I K +K
Sbjct: 151 TKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLANGVQPDVYTYSVLINGLCKESKM 210
Query: 229 DEAMKVFQMMRVKRMDDLGLS----------------------------------TYRIV 254
D+A ++F M VK + G++ TY +
Sbjct: 211 DDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTL 270
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK-----VVEEI 309
I +CK G + QA+ +++EM +G++ D T +++I G G L A+K + E I
Sbjct: 271 IYGLCKNGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQENI 330
Query: 310 EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
D++ Y LI GL + ++ +A ++ REM+ G +P + TY M++
Sbjct: 331 RLDDVA-YTALISGLCQEGQSVDAEKMLREMLSVGLKPDIGTYTMIIN 377
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 92/222 (41%), Gaps = 38/222 (17%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
N +TF ++D K+ +DL E + M + L+ D
Sbjct: 228 NGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPD------------------------ 263
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVG 191
L N ++ LC+ + +A LI ++S + +KP++ Y LI G C G
Sbjct: 264 ----------LITYNTLIYGLCKNGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEG 313
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLST 250
DL A K M E +I + + +A K+ +M+ V D+G T
Sbjct: 314 DLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQSVDAEKMLREMLSVGLKPDIG--T 371
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
Y ++I+ CK+G + + +L+EM + G +T + ++ G
Sbjct: 372 YTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 413
>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 806
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 162/383 (42%), Gaps = 32/383 (8%)
Query: 77 FNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIMN 135
+N ++ + K ++ + EM R + N ++ + L+++ ++ + F M
Sbjct: 247 YNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMF 306
Query: 136 DCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGDLI 194
GC +++ ++K R V +A L L + E + PN +AY LI G C G++
Sbjct: 307 VRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMD 366
Query: 195 EASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIV 254
EA +WN M + P++ +I F K A + + M + + Y +
Sbjct: 367 EAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKM-INCGCRPNVVVYTCM 425
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK--- 311
+D +C+ QA+ +++ M G +T ++ I GL GR+ A V++++EK
Sbjct: 426 VDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYEC 485
Query: 312 -PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH----------- 359
P+I Y+ L+ GL R REA + RE+ +R E TY ++ G
Sbjct: 486 LPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQ 545
Query: 360 -LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH--- 415
LGK G + DTI V V A L K +V++ F + H
Sbjct: 546 LLGKMLVNG----IKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADIITHTII 601
Query: 416 ------YYSNEEGVVMFEEVGKK 432
+ EE VV E+ K+
Sbjct: 602 LWGICNWLGTEEAVVYLHEMLKR 624
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 162/353 (45%), Gaps = 28/353 (7%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMV 128
F H +T+ M+D +G++ +D LQ+M + + + F+ + ++ +
Sbjct: 70 FKHTHLTYETMIDKLGRNNEMDGVSYLLQQMKLENVPCSQELFQFVIKCYRRSNLGEQGL 129
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKL--VVEAKYLILKLSEWIKPNEIAYGWLIKG 186
F+ + + GCE S+++ N V+ L + L ++ A Y +K SE ++PN Y L+K
Sbjct: 130 KMFYRIREFGCEPSVKIYNLVLDALLSQNLFKMINALYNNMK-SEGLEPNVFTYNVLLKA 188
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
C G + A K+ M+++G +P +I + K+ D+A ++ M+ + +
Sbjct: 189 LCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKAREL--AMKFEPV--- 243
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
+ Y +I +CK + +A+ ++ EM RG++ + ++ S++I L G + + V
Sbjct: 244 -VPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVF 302
Query: 307 EEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
+ +P++ + LIKG R +A ++ MI+ G P + Y L+ G L
Sbjct: 303 GRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHG-LCS 361
Query: 363 RG-------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
G + P V + + G K+G + A + +++N G
Sbjct: 362 DGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCG 414
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 137/303 (45%), Gaps = 8/303 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
N + +N ++ + N+D +M + + N T+ + A+ +L +
Sbjct: 348 NVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETW 407
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
+ M +CGC ++ + +V LCQ + +A LI + S+ P I + IKG C
Sbjct: 408 NKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRA 467
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G + A + + M P+I +++++ F+ N EA + + + ++++ T
Sbjct: 468 GRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVE-FDCVT 526
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y ++ G Q +L +M GI+ D +T+++ + G+++ A KV++ I
Sbjct: 527 YNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNIS 586
Query: 311 -----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
+ DI + ++ G+ EA EM+KRG P + T+ +L++G K G
Sbjct: 587 AEKEFRADIITHTIILWGICNWLGTEEAVVYLHEMLKRGIFPNIATWNVLVRGFFSKLGH 646
Query: 366 KGP 368
GP
Sbjct: 647 MGP 649
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 103/221 (46%), Gaps = 14/221 (6%)
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQ 266
G EPS+ + + +++ N ++ M+ + ++ + TY +++ +C+ GK+
Sbjct: 139 GCEPSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEP-NVFTYNVLLKALCQNGKVDG 197
Query: 267 AYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISLYHGLIKGLLR 326
A +L EM +G + D+++ +++I + G + +A ++ + E P + +Y+ LI G+ +
Sbjct: 198 ACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKARELAMKFE-PVVPVYNALIHGVCK 256
Query: 327 LRRAREATQVFREMIKRGCEPTMHTYIMLLQ------------GHLGKRGRKGPDPLVNF 374
R +EA + EM+ RG +P + +Y ++ G+ +G P V
Sbjct: 257 ECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQT 316
Query: 375 DTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
T + G G+ DA ++ GV YN +H
Sbjct: 317 FTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIH 357
>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
Length = 736
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 143/314 (45%), Gaps = 30/314 (9%)
Query: 76 TFNRMVDIIGKSRNID---LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
T+ ++D K+ I+ +E ++ +G V T+ + + +++ + + FH
Sbjct: 260 TYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTV--VTYTALIHAYLKAKQVPQANDIFH 317
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-----------------SEWIKP 175
M D GC + +V LC+ + +A + KL + P
Sbjct: 318 RMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAP 377
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
N + YG L+ G C + A ++ + M G EP+ V D +I+ F K K D A +VF
Sbjct: 378 NVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 437
Query: 236 -QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
QM + + + TY +ID M K G++ A +L +M K + +T +++I GL
Sbjct: 438 LQMTKCGYLPS--VHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLC 495
Query: 295 ARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
G +A K++ +E+ P++ Y LI GL + + + +F +M ++GC P
Sbjct: 496 RIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYV 555
Query: 351 TYIMLLQGHLGKRG 364
TY +L+ HL G
Sbjct: 556 TYRVLIN-HLCAAG 568
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 153/354 (43%), Gaps = 39/354 (11%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFF 131
N F R + +GK D ++ ++EM R+ V D T+ + L +++K F
Sbjct: 190 NVANFARCLCGVGK---FDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLF 246
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
M G + ++ + C+ L+ +A++L ++ S P + Y LI Y
Sbjct: 247 QEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKA 306
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDL--- 246
+ +A+ I++ M D G P+ +++ K +A +V+ +++ D
Sbjct: 307 KQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFY 366
Query: 247 -----------GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
+ TY ++D +CK K+ A+ +L+ M G E +++ ++I G
Sbjct: 367 FPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCK 426
Query: 296 RGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
G++ A +V ++ K P + Y LI + + R A +V +M+K C P + T
Sbjct: 427 AGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVT 486
Query: 352 YIMLLQG--HLGKRGR----------KGPDPLVNFDTIFVGGLVKAGK---SLD 390
Y ++ G +G+ + KG P V T + GL KAGK SLD
Sbjct: 487 YTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLD 540
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 141/337 (41%), Gaps = 47/337 (13%)
Query: 68 PC-----FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEV 121
PC A N +T+ +VD + K+ +D E L M + AL+ +
Sbjct: 368 PCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKA 427
Query: 122 RELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQR-KLVVEAKYLILKLSEWIKPNEIAY 180
++ F M CG S+ ++ + + +L + K L L + PN + Y
Sbjct: 428 GKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTY 487
Query: 181 GWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
+I G C +G+ +A K+ +LM ++G P++ +I+ K K D ++ +F M
Sbjct: 488 TAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSR 547
Query: 241 KRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEM------------------FKRGIEAD 282
K TYR++I+ +C G + +A +L EM F + A
Sbjct: 548 KGCSP-NYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIAS 606
Query: 283 NLTLSSI----------IYGLL-----ARGRLREAYKVVEEIE------KPDISLYHGLI 321
L + +YG+L GRL A ++ +E+ K D +Y LI
Sbjct: 607 LGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLI 666
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+ L + EA +++ EM +RG P + ++ L++G
Sbjct: 667 QALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKG 703
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 113/256 (44%), Gaps = 16/256 (6%)
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPN 176
L E + ++F H M C ++ ++ ++K + K +I + ++E PN
Sbjct: 52 LMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPN 111
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINK------DDE 230
+ L+ YC+ D A K+ N MT G P V + I + K D
Sbjct: 112 PSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDL 171
Query: 231 AMKVFQMMRVKR--MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
A K++ M ++ + ++ + +C GK +A+ +++EM ++G D T S
Sbjct: 172 AEKIYGEMLAANCVLNKVNVANFA---RCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSK 228
Query: 289 IIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+I L ++ +A+ + +E++ PD+ Y LI + +A +F EM G
Sbjct: 229 VITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVG 288
Query: 345 CEPTMHTYIMLLQGHL 360
C PT+ TY L+ +L
Sbjct: 289 CSPTVVTYTALIHAYL 304
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 130/315 (41%), Gaps = 19/315 (6%)
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-------LSEWIKPNEIAYGWLIKG 186
M CGC + N + ++C ++ + L L L+ N++ +
Sbjct: 138 MTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARC 197
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
C VG +A ++ M +GF P K+I K ++A +FQ M++ +
Sbjct: 198 LCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTP- 256
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA---- 302
+ TY I+ID CK G I QA + EEM G +T +++I+ L ++ +A
Sbjct: 257 DVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIF 316
Query: 303 YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
+++V+ +P+ Y L+ GL + +A +V+ ++I Y
Sbjct: 317 HRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPC------- 369
Query: 363 RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEG 422
R P V V GL KA K A + ++ +++ G E Y+ + +
Sbjct: 370 EDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGK 429
Query: 423 VVMFEEVGKKLREVG 437
+ +EV ++ + G
Sbjct: 430 IDSAQEVFLQMTKCG 444
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 110/256 (42%), Gaps = 42/256 (16%)
Query: 149 VVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEG 207
+V LC+ V A L+ LS +PN I Y LI G+C G + A +++ MT G
Sbjct: 385 LVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCG 444
Query: 208 FEPSIDVVDKMIETFFKINKDDEAMKVF-QMMR--------------------------- 239
+ PS+ +I+ FK + D AMKV QM++
Sbjct: 445 YLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKAL 504
Query: 240 --VKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
+ M++ G S TY +ID + K GKI + + +M ++G + +T +I L
Sbjct: 505 KLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHL 564
Query: 294 LARGRLREAYKVVEEIEK---PD-ISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
A G L +A ++ E+++ P + Y I+G + A + + EM G P
Sbjct: 565 CAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIA--SLGILEEMESYGTVPIA 622
Query: 350 HTYIMLLQGHLGKRGR 365
Y ML+ K GR
Sbjct: 623 PVYGMLIDC-FSKAGR 637
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 124/284 (43%), Gaps = 25/284 (8%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHIM 134
T+ ++D + K +DL + L +M + N T+ + L + E +K + +M
Sbjct: 451 TYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLM 510
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDL 193
+ GC ++ ++ L + + + L ++S + PN + Y LI C G L
Sbjct: 511 EEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLL 570
Query: 194 IEASKIWNLMTD-------EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
+A + M +G+ +I K I ++ E+ + V
Sbjct: 571 DKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPV------ 624
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFK--RGIEADNLTLSSIIYGLLARGRLREAYK 304
Y ++ID K G++ A + +EM + ++ DN +S+I L ++ EA++
Sbjct: 625 ----YGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFR 680
Query: 305 VVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+ E+ + P++S++ LIKGL+ +++ EA Q+ + G
Sbjct: 681 LYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEG 724
>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
Length = 970
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 145/305 (47%), Gaps = 11/305 (3%)
Query: 70 FAHNSITFNRMVDIIGKSRNID---LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKK 126
F N +N +++ + K ++D L ++ + M +ND T+ I + + + L
Sbjct: 354 FLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLP--LNDVTYSILIDSFCKRGMLDV 411
Query: 127 MVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIK 185
++F M + G ++ N ++ C+ + A++L K+ +E ++P + LI
Sbjct: 412 AESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLIS 471
Query: 186 GYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD 245
GYC + +A K++ M ++ PS+ +I N+ EA K+F M +++
Sbjct: 472 GYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKP 531
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
+ TY ++I+ CK + +A+ +LE+M G+ D T +I GL + GR+ A
Sbjct: 532 TEV-TYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDF 590
Query: 306 VEEIEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG 361
++++ K ++ L Y L+ G R EA EMI+RG + + +L+ G +
Sbjct: 591 IDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMK 650
Query: 362 KRGRK 366
++ K
Sbjct: 651 QQDMK 655
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 158/352 (44%), Gaps = 23/352 (6%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+T+N M++ K+ N+D +E L++M LV D T++ + L + +F
Sbjct: 534 VTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDD 593
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
++ + + + ++ C + + EA ++ + I + + + LI G D
Sbjct: 594 LHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQD 653
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ + M D+G P + MI+ + K ++ + +M ++ + TY
Sbjct: 654 MKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFP-NVVTYT 712
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK- 311
++ +CK G+I +A + E+M I +++T + L G ++EA + E+ K
Sbjct: 713 AFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLKG 772
Query: 312 --PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL--GKRG--- 364
+ + Y+ LI+G +L R EAT+V EM + G P TY ++ H G G
Sbjct: 773 LLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAV 832
Query: 365 -------RKGPDP-LVNFDTIFVGGLVKAGKSLDAA-KYVERVMNRGVEVPR 407
RKG +P V F+ + G V +LD A + +++RG++ PR
Sbjct: 833 ELWDTMLRKGVEPDSVAFNLLIYGCCVNG--ALDKAFELRNDMLSRGLK-PR 881
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/305 (20%), Positives = 122/305 (40%), Gaps = 54/305 (17%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAE 120
Y Q +P +S+ + M+D K + E L M + + A M L +
Sbjct: 665 YDQGLRP----DSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCK 720
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAY 180
V E+ + + F M + + +L + + EA L ++ + + N Y
Sbjct: 721 VGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLKGLLANTATY 780
Query: 181 GWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
LI+G+C +G LIEA+K+ + MT+ G P D +
Sbjct: 781 NILIRGFCKLGRLIEATKVLSEMTENGIFP--DCI------------------------- 813
Query: 241 KRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
TY +I C+ G + A + + M ++G+E D++ + +IYG G L
Sbjct: 814 ---------TYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALD 864
Query: 301 EAYKV-------------VEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
+A+++ + +++K D+ + + L+ G A +++ M+ R +
Sbjct: 865 KAFELRNDMLSRGLKPRQILQLQKRDLGVCNFLMHGGCVTGEVDTALRLYHSMLTRAVKL 924
Query: 348 TMHTY 352
++ +
Sbjct: 925 SLEMW 929
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 91/461 (19%), Positives = 177/461 (38%), Gaps = 44/461 (9%)
Query: 21 SPESRLHSSLSSCNFNLTHEFFLQICN--NFPLSWRPVYLFFQYTQKAQPCFA------- 71
SP R S+ S N N TH F I + LSW+ + + +P
Sbjct: 14 SPLQRTFSTSKSTNENDTH-FITHISDIVRGNLSWKIAFNDPSISSTLKPHHVEQVLINT 72
Query: 72 -HNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIA---LMTLAEVRELKKM 127
H+S R + +G +N++ + + LV +K F A L TL K
Sbjct: 73 LHDSKLALRFFNFLGLHKNMNHTTTSFAIL-VHALVQNKLFWPANSLLHTLLLRGSDPKF 131
Query: 128 VNFFHIMNDCGCEYSLEM-LNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIK 185
V + + C++S + + +V + Q V +A ++ L L + P ++
Sbjct: 132 VFEKFLESHKQCKFSSTLGFDFLVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILN 191
Query: 186 GYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD 245
G + I ++++ + G +P +I + ++ A + M R D
Sbjct: 192 GLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFD- 250
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
L + TY ++I +CK G + +A + + + ++G++ D +T +++ G + + +
Sbjct: 251 LSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICL 310
Query: 306 VEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG 361
+ E+ + P + GL+ GL + A + ++ + G P + Y L+
Sbjct: 311 MNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALC- 369
Query: 362 KRGRKGPD----------------PLVNFD-TIFVGGLVKAGKSLDAAKYVERVMNRGVE 404
KG D PL + +I + K G A Y R++ G+
Sbjct: 370 ----KGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIR 425
Query: 405 VPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLADIF 445
+ YN ++ + + E + K+ GL A F
Sbjct: 426 ETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTF 466
>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 840
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 163/337 (48%), Gaps = 13/337 (3%)
Query: 53 WRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TF 111
++ LFFQ T+ + F + ++FN ++ K +D+ M + L+ D ++
Sbjct: 262 FQDAVLFFQDTEGKE--FQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSY 319
Query: 112 KIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LS 170
I + L + + ++ + M + G E + N + K L+ A +I K L
Sbjct: 320 NILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLI 379
Query: 171 EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDE 230
+ PN + Y LI G+C +G++ EA K++ M GF+ SI ++ + K + D
Sbjct: 380 KGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDV 439
Query: 231 AMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
A K+F M + L TY +I +CK+G++ QA + E+M I ++L +I+
Sbjct: 440 AFKLFCEMEANGLRP-DLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAIL 498
Query: 291 YGLLARGRLREA-----YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGC 345
GL +G++ +A Y + + DI LY+ +I G ++ REA ++++++ ++G
Sbjct: 499 MGLCEKGKISQARMYFDYLITSNLSL-DIILYNIMIDGYIKRGNTREAVKLYKQLGEKGI 557
Query: 346 EPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGL 382
PT+ T+ L+ G R L+ DTI + GL
Sbjct: 558 SPTIVTFNSLMYGFCINRKLSQARRLL--DTIKLHGL 592
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/390 (18%), Positives = 153/390 (39%), Gaps = 61/390 (15%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIA-LMTLAEVRELKKMVNFFHI 133
IT++ ++ + K + ++M R++ + A LM L E ++ + +F
Sbjct: 457 ITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDY 516
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
+ + + N ++ +R EA L +L E I P + + L+ G+C
Sbjct: 517 LITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRK 576
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
L +A ++ + + G EP+ ++ + + +++ M+ K + + TY
Sbjct: 577 LSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHI-TYT 635
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP 312
+VI +CK+ K+ ++ +LE+M G+ D ++
Sbjct: 636 VVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVS--------------------------- 668
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLV 372
Y+ +I+ + R R+A Q++ +M+ EPT TY
Sbjct: 669 ----YNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTY-------------------- 704
Query: 373 NFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN----EEGVVMFEE 428
I + G G DA + + NR V + ++ Y + + ++ VV F +
Sbjct: 705 ---NILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQ 761
Query: 429 VGKKLREVGLADLADIFQRYGKKMATRERR 458
+ +K EV + D + + R K+ E +
Sbjct: 762 MVEKGFEVSIRDYSAVIGRLCKRCLVTEAK 791
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/315 (20%), Positives = 125/315 (39%), Gaps = 62/315 (19%)
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
+E ++ G C +A + + F+PS+ + ++ + K+ D A F
Sbjct: 245 SEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFF 304
Query: 236 QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
MM + S Y I+I +C G + +A + +M G+E D +T + + G
Sbjct: 305 CMMLKHGLLPDAYS-YNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRL 363
Query: 296 RGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRG------- 344
G + A+ +++++ P++ Y LI G ++ EA ++++EMI G
Sbjct: 364 LGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIIS 423
Query: 345 ---------------------CE-------PTMHTYIMLLQGHLGKRG------------ 364
CE P + TY L+ G L K+G
Sbjct: 424 STVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHG-LCKQGEVQQAILLYEKM 482
Query: 365 ---RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY---- 417
R P+ L++ + GL + GK A Y + ++ + + YN + Y
Sbjct: 483 CSNRIIPNSLIHGAILM--GLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRG 540
Query: 418 SNEEGVVMFEEVGKK 432
+ E V +++++G+K
Sbjct: 541 NTREAVKLYKQLGEK 555
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 92/209 (44%), Gaps = 9/209 (4%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
IT+ ++ + K + + L++M L D+ ++ + + R+++K +
Sbjct: 632 ITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDK 691
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGD 192
M E + N ++ C + +A L++ L + + N+ AY +IK +C GD
Sbjct: 692 MLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGD 751
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM---DDLGLS 249
+ +A + M ++GFE SI +I K EA F MM + DL
Sbjct: 752 VDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDL--- 808
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRG 278
+ ++++ + G ++ + +L EM K G
Sbjct: 809 -FEVLLNAFHQCGHLNSEFELLAEMIKSG 836
>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 485
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 169/375 (45%), Gaps = 36/375 (9%)
Query: 90 IDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKV 149
IDLF +Q R L + F L +A+ + +++ FH M CG + L N V
Sbjct: 54 IDLFCNMIQS---RPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIV 110
Query: 150 VKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGF 208
+ LC+ V A ++ K+ ++ +P+ + LI G+C + A + + M +
Sbjct: 111 INCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRC 170
Query: 209 EPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK--RMDDLGLSTYRIVIDWMCKRGKISQ 266
+ + + + +I+ F K + A+ +F M R D + TY ++ +C G+ S
Sbjct: 171 KLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTV---TYNSLVTGLCCSGRRSD 227
Query: 267 AYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIK 322
A ++ +M R I + +T +++I + G+ EA K EE+ + PD+ Y+ +I
Sbjct: 228 AARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIH 287
Query: 323 GLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL-GKRGRKGPDPL---------- 371
GL + EA Q+ M+ +GC P + TY L+ G KR +G +
Sbjct: 288 GLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVV 347
Query: 372 --VNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHY-----YSNEEGVV 424
V F+TI + G +AG+ A + R+ +R P L Y + E+ +V
Sbjct: 348 DTVTFNTI-IQGYFQAGRPDAAQEIFSRMGSR----PNIRTYSILLYGLCYNWRVEKALV 402
Query: 425 MFEEVGKKLREVGLA 439
+FE + K E+ +
Sbjct: 403 LFESMQKSEMELDIT 417
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 156/358 (43%), Gaps = 20/358 (5%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHI 133
+ F++++ I KS+N DL M + +D T+ I + L ++
Sbjct: 70 VEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVINCLCRCSRFVIALSVVGK 129
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGD 192
M G E + ++ ++ CQ V A L+ K+ E K + + Y +I G+C G
Sbjct: 130 MMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGL 189
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL--GLST 250
+ A ++ M +G + ++ + +A + +MR M D+ + T
Sbjct: 190 VNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAAR---LMRDMVMRDIVPNVIT 246
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
+ +I+ + GK +A EEM +R I+ D T +S+I+GL G++ EA ++++ +
Sbjct: 247 FTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMV 306
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR--- 363
PD+ Y+ LI G + +R E T++ REM +RG T+ ++QG+
Sbjct: 307 TKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPD 366
Query: 364 ------GRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
R G P + +I + GL + A E + +E+ YN +H
Sbjct: 367 AAQEIFSRMGSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIH 424
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 100/206 (48%), Gaps = 9/206 (4%)
Query: 147 NKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N ++ LC V EAK ++ L +++ P+ + Y LI G+C + E +K+ M+
Sbjct: 283 NSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQ 342
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKIS 265
G + +I+ +F+ + D A ++F M + + TY I++ +C ++
Sbjct: 343 RGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRMGSRP----NIRTYSILLYGLCYNWRVE 398
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLI 321
+A + E M K +E D T + +I+G+ G + +A+ + + +PD+ Y +I
Sbjct: 399 KALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMI 458
Query: 322 KGLLRLRRAREATQVFREMIKRGCEP 347
G R R +A ++R+M + G P
Sbjct: 459 SGFCRKRLWDKADFLYRKMQEDGLLP 484
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 87/187 (46%), Gaps = 2/187 (1%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
I PN I + LI + G +EA K + M +P + + MI + DEA
Sbjct: 240 IVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAK 299
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
++ +M K + TY +I+ CK ++ + ++ EM +RG+ D +T ++II G
Sbjct: 300 QILDLMVTKGCFP-DVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQG 358
Query: 293 LLARGRLREAYKVVEEI-EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
GR A ++ + +P+I Y L+ GL R +A +F M K E + T
Sbjct: 359 YFQAGRPDAAQEIFSRMGSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITT 418
Query: 352 YIMLLQG 358
Y +++ G
Sbjct: 419 YNIVIHG 425
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 24/232 (10%)
Query: 147 NKVVKTLCQRKLVVEAKYLILK------LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIW 200
N + T V E K+L K + I P+ Y +I G C G + EA +I
Sbjct: 243 NVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQIL 302
Query: 201 NLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVID 256
+LM +G P + + +I F K + DE K+ V+ M GL T+ +I
Sbjct: 303 DLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKL-----VREMSQRGLVVDTVTFNTIIQ 357
Query: 257 WMCKRGKISQAYTMLEEMFKR-GIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP--- 312
+ G+ A +E+F R G + T S ++YGL R+ +A + E ++K
Sbjct: 358 GYFQAGRPDAA----QEIFSRMGSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEME 413
Query: 313 -DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
DI+ Y+ +I G+ + +A +F + +G EP + TY ++ G KR
Sbjct: 414 LDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKR 465
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 100/421 (23%), Positives = 177/421 (42%), Gaps = 35/421 (8%)
Query: 27 HSSL--SSCNFNLTHEF------FLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFN 78
H SL S NFN F FL C ++ + FF + P +S F
Sbjct: 43 HKSLNVSPQNFNTPISFQQQLSMFLHNCKTGNITATQAFQFFHLMMYSNPTPPLSS--FT 100
Query: 79 RMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIMNDC 137
++ + K ++ + +M + D T I L L V + + + +
Sbjct: 101 HLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRR 160
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEA 196
G + ++K LC + +A L ++ + PN I YG L+KG C G++ A
Sbjct: 161 GYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIA 220
Query: 197 SKIWNLMTDEG------FEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
K+ M ++ F+P + +I+ K ++DEA +F+ M+V+ M +S
Sbjct: 221 LKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVIS- 279
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y +I C GK +A + EM +G++ + +T + +I L G++ EA ++E +
Sbjct: 280 YTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMI 339
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG-- 364
+ P++ Y+ LI+G + A ++F M +GCEP + Y +L+ G+
Sbjct: 340 QRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVE 399
Query: 365 ----------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
+ G P V + GL + GK DA K + G+ + Y FL
Sbjct: 400 EAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFL 459
Query: 415 H 415
+
Sbjct: 460 N 460
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 152/327 (46%), Gaps = 46/327 (14%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEM---GRRRLVNDKTFKI-ALMTLAEVRELKKMVNF 130
I+++ ++D + K R D + +EM G V T I + E K++
Sbjct: 243 ISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRL--- 299
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCD 189
F+ M + G + ++ N ++ LC+ V+EAK L+ + + I PN + Y LI+G+C
Sbjct: 300 FNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCL 359
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ-MMRVKRMDDL-- 246
VGDL A +++ M +G EP + +I + K +K +EAMK++ M++V + D+
Sbjct: 360 VGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKT 419
Query: 247 -------------------------------GLSTYRIVIDWMCKRGKISQAYTMLEEMF 275
L Y I ++ +CK G + +A + ++
Sbjct: 420 YGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLK 479
Query: 276 KRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAR 331
I+ D + +I GL G+L A+++ E++ +PD+ Y+ +I R +
Sbjct: 480 SYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVV 539
Query: 332 EATQVFREMIKRGCEPTMHTYIMLLQG 358
+A +F++M K GC P TY L++G
Sbjct: 540 KANILFQKMEKNGCTPDKITYATLIRG 566
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 135/288 (46%), Gaps = 15/288 (5%)
Query: 64 QKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVR 122
Q QP N +TFN ++D++ K + + L+ M +R +V N T+ + V
Sbjct: 306 QGVQP----NVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVG 361
Query: 123 ELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYL---ILKLSEWIKPNEIA 179
+L F M GCE + ++ C+ V EA L +L++ + +P+
Sbjct: 362 DLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGK--RPDVKT 419
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
YG L+ G G + +A K++ +M G + + + K EAM++F ++
Sbjct: 420 YGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLK 479
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
+ L + + +ID +CK GK+ A+ + E++ + ++ D +T + +I+ G++
Sbjct: 480 SYNIK-LDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQV 538
Query: 300 REAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
+A + +++EK PD Y LI+G ++ + ++ M++R
Sbjct: 539 VKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQR 586
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 107/261 (40%), Gaps = 36/261 (13%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P ++ L+ G + + ++N M G P ++ ++ +N+ E + V
Sbjct: 94 PPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAV 153
Query: 235 FQ-MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
++R + D+ TY +I +C +IS+A + M K G + +T +++ GL
Sbjct: 154 MAGILRRGYIPDI--VTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGL 211
Query: 294 LARGRLREAYKVVEEIE----------KPDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
G + A K+ +E+ KP + Y +I L + RR EA +F EM +
Sbjct: 212 CRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQ 271
Query: 344 GCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
G PT+ +Y L+ G F G GK +A + ++N+GV
Sbjct: 272 GMTPTVISYTSLIHG-------------------FCCG----GKWEEAKRLFNEMVNQGV 308
Query: 404 EVPRFDYNKFLHYYSNEEGVV 424
+ +N + E V+
Sbjct: 309 QPNVVTFNVLIDVLCKEGKVI 329
>gi|410109923|gb|AFV61041.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
hederifolia]
Length = 431
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 139/288 (48%), Gaps = 41/288 (14%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T + L L +++ K + F+ + +CG SL N ++ C+ + A+ + +
Sbjct: 109 TCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAI 168
Query: 170 SEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++W ++P+ ++Y L+ GY +GDL E ++ + M G +P + +I K +K
Sbjct: 169 TKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKM 228
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
D+A ++F M VK + G+ T+ +ID CK G++ A + ++M + + D +T ++
Sbjct: 229 DDANELFDEMLVKGLIPNGV-TFTTLIDGHCKNGRVDLAMEIYKQMLSQCLLPDLITYNT 287
Query: 289 IIYGLLARGRLREAYKVVEEIE----KPD------------------------------- 313
+IYGL +G L++A+ +++E+ KPD
Sbjct: 288 LIYGLXKKGDLKQAHDLIDEMSMKGLKPDKFTYXTLIDGCCKEGDLDTAFEHRKRMIQEN 347
Query: 314 ISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
I L Y LI GL + R+ +A ++ REM+ G +P TY M++
Sbjct: 348 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDDRTYTMIIN 395
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 91/227 (40%), Gaps = 43/227 (18%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N +TF ++D K+ +DL E ++M + L+ D T+ + L + +LK+ +
Sbjct: 246 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQCLLPDLITYNTLIYGLXKKGDLKQAHDLI 305
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQR-KLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDV 190
M+ G + ++ C+ L ++ + E I+ +++AY LI G C
Sbjct: 306 DEMSMKGLKPDKFTYXTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQE 365
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G ++A K+ M G +P DD T
Sbjct: 366 GRSVDAEKMLREMLSVGLKP-----------------DDR-------------------T 389
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
Y ++I+ CK+G + + +L+EM + D S + Y +L G
Sbjct: 390 YTMIINEFCKKGDVWKGSKLLKEM-----QRDGHVPSVVTYNVLMNG 431
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 72/160 (45%), Gaps = 16/160 (10%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAE 120
Y Q C + IT+N ++ + K ++ + + EM + L DK T+ + +
Sbjct: 270 YKQMLSQCLLPDLITYNTLIYGLXKKGDLKQAHDLIDEMSMKGLKPDKFTYXTLIDGCCK 329
Query: 121 VREL-------KKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEW 172
+L K+M+ ++D ++ LCQ V+A+ ++ + LS
Sbjct: 330 EGDLDTAFEHRKRMIQENIRLDDVA-------YTALISGLCQEGRSVDAEKMLREMLSVG 382
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSI 212
+KP++ Y +I +C GD+ + SK+ M +G PS+
Sbjct: 383 LKPDDRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSV 422
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 146/293 (49%), Gaps = 24/293 (8%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLSE--WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
N V+ C R V A ++ ++ E I PN+ YG +I G+C VG + EA K+++ M
Sbjct: 523 NTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEML 582
Query: 205 DEG-FEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGK 263
+G +P + + +I + K D A+ +++ V+R + ++TY +++ + G+
Sbjct: 583 TKGEVKPEAVMYNALIGGYCDQGKLDTAL-LYRDRMVERGVAMTVATYNLLVHALFMDGR 641
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHG 319
++AY ++EEM +G+ D T + +I G G +++A ++ E + + + Y
Sbjct: 642 GTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTA 701
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------------LG--KRGR 365
LI L + + +E ++F E ++RG P + Y L+ H +G ++ R
Sbjct: 702 LIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR 761
Query: 366 KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYS 418
PD V ++T+ + GL G+ +A K ++ + RG++ YN + YS
Sbjct: 762 IAPDD-VTYNTL-MRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYS 812
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 131/300 (43%), Gaps = 52/300 (17%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
+KP + Y LI GYCD G L A + M + G ++ + ++ F + EA
Sbjct: 587 VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAY 646
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
++ + M K + + TY I+I+ CK G + +A + E M +RG+ A +T +++IY
Sbjct: 647 ELVEEMGGKGLAP-DVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYA 705
Query: 293 LLARGRLRE-----------------------------------AYKVVEEIEK----PD 313
L +G+++E A++++ E+EK PD
Sbjct: 706 LSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPD 765
Query: 314 ISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG--------- 364
Y+ L++GL L R EA ++ EM +RG +P + TY L+ G+ K
Sbjct: 766 DVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRN 825
Query: 365 ---RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEE 421
KG +P + + GL K G+ DA V+ ++ G+ Y + + E+
Sbjct: 826 EMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTED 885
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 107/225 (47%), Gaps = 9/225 (4%)
Query: 146 LNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N +++ LC A L+ ++ +PN + Y +I G+C G + A I M +
Sbjct: 491 FNIMLRHLCSAGKPARALELLRQMP---RPNAVTYNTVIAGFCSRGRVQAALDIMREMRE 547
Query: 206 E-GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
G P+ +I + K+ + DEA+KVF M K Y +I C +GK+
Sbjct: 548 RGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKL 607
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGL 320
A + M +RG+ T + +++ L GR EAY++VEE+ PD+ Y+ L
Sbjct: 608 DTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNIL 667
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
I G + ++A ++F M +RG T+ TY L+ L K+G+
Sbjct: 668 INGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYA-LSKKGQ 711
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 117/233 (50%), Gaps = 7/233 (3%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLIEA 196
G ++ N +V L EA L+ ++ + + P+ Y LI G+C G++ +A
Sbjct: 621 GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKA 680
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVID 256
+I+ M+ G ++ +I K + E K+F V+R L Y +I+
Sbjct: 681 LEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEA-VRRGIRPDLVLYNALIN 739
Query: 257 WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KP 312
G I +A+ ++ EM K+ I D++T ++++ GL GR+ EA K+++E+ +P
Sbjct: 740 SHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQP 799
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
D+ Y+ LI G ++A ++ EM+ +G PT+ TY L+QG L K G+
Sbjct: 800 DLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQG-LCKNGQ 851
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 107/226 (47%), Gaps = 3/226 (1%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMV 128
A + T+N +++ K N+ E + M RR + T+ + L++ ++++
Sbjct: 657 LAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETD 716
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGY 187
F G L + N ++ + + A ++ ++ + I P+++ Y L++G
Sbjct: 717 KLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGL 776
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C +G + EA K+ + MT+ G +P + + +I + +A+++ M K +
Sbjct: 777 CLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPT- 835
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
L TY +I +CK G+ A M++EM + GI D+ T S+I GL
Sbjct: 836 LLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 881
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 80/187 (42%), Gaps = 18/187 (9%)
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKR-GIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY VI C RG++ A ++ EM +R GI + T ++I G GR+ EA KV +E
Sbjct: 521 TYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDE 580
Query: 309 I-----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG----- 358
+ KP+ +Y+ LI G + A M++RG T+ TY +L+
Sbjct: 581 MLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDG 640
Query: 359 -------HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
+ + G KG P V I + G K G A + E + RGV Y
Sbjct: 641 RGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYT 700
Query: 412 KFLHYYS 418
++ S
Sbjct: 701 ALIYALS 707
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 93/225 (41%), Gaps = 28/225 (12%)
Query: 241 KRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
RM L L + + + A+ + +MF+ + T + ++ L + G+
Sbjct: 446 SRMKSLSLPISTASLHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPA 505
Query: 301 EAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKR-GCEPTMHTYIMLLQG- 358
A +++ ++ +P+ Y+ +I G R + A + REM +R G P +TY ++ G
Sbjct: 506 RALELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGW 565
Query: 359 --------------HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVE 404
+ +G P+ ++ +GG GK A Y +R++ RGV
Sbjct: 566 CKVGRVDEAVKVFDEMLTKGEVKPEAVMY--NALIGGYCDQGKLDTALLYRDRMVERGVA 623
Query: 405 VPRFDYNKFLHYY----SNEEGVVMFEEVGKKLREVGLADLADIF 445
+ YN +H E + EE+G K GLA D+F
Sbjct: 624 MTVATYNLLVHALFMDGRGTEAYELVEEMGGK----GLA--PDVF 662
>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
[Oryza sativa Japonica Group]
Length = 571
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 152/338 (44%), Gaps = 47/338 (13%)
Query: 70 FAHNSITFNRMVDI------IGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRE 123
A + T+N ++D G ++D+ + + E G TF + + +
Sbjct: 222 LAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTA--VTFGVLINGYCKNSN 279
Query: 124 LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGW 182
V F M G S+ N ++ LC V E L+ ++ + + PNEI +G
Sbjct: 280 TAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGC 339
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK- 241
++KG+C G + +A+ + MT+ EP + + + +I+ + ++ K ++AM V + M K
Sbjct: 340 VLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKG 399
Query: 242 -----------------------------RMDDLGLS----TYRIVIDWMCKRGKISQAY 268
M + G+ TY ++I +C +G++ +A
Sbjct: 400 ISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAV 459
Query: 269 TMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGL 324
+L+EM + G+E ++LT ++II G +G ++ AY++ +EK ++ Y+ IK
Sbjct: 460 KLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYF 519
Query: 325 LRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
++ + EA + EM+ + P TY + +G + K
Sbjct: 520 CQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEK 557
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 162/381 (42%), Gaps = 41/381 (10%)
Query: 56 VYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIA 114
Y F ++ P ++ + N ++ + ++ +DL + + RRR+ D TF
Sbjct: 138 AYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTV 197
Query: 115 LMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-- 172
+ L + +L+K + + G S+ N ++ C++ ++ + L E
Sbjct: 198 ISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVE 257
Query: 173 --IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDE 230
I P + +G LI GYC + A +++ M +G S+ + +I K +E
Sbjct: 258 AGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEE 317
Query: 231 AMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTL 286
+K+ + M+DLGLS T+ V+ CK+G ++ A ++ M +R +E D +
Sbjct: 318 GVKLME-----EMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIY 372
Query: 287 SSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIK 342
+ +I G++ +A V E + K P+++ Y+ LI G R R A+ + EM +
Sbjct: 373 NILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKE 432
Query: 343 RGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
+G E + TY + +G L G+ A K ++ + G
Sbjct: 433 KGIEADVVTY-----------------------NVLIGALCCKGEVRKAVKLLDEMSEVG 469
Query: 403 VEVPRFDYNKFLHYYSNEEGV 423
+E YN + + ++ +
Sbjct: 470 LEPNHLTYNTIIQGFCDKGNI 490
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 94/227 (41%), Gaps = 42/227 (18%)
Query: 75 ITFNRMVDI---IGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFF 131
+ +N ++D+ +GK + E + + G N T+ + + + +
Sbjct: 370 VIYNILIDVYRRLGKMEDAMAVKEAMAKKGISP--NVTTYNCLITGFSRSGDWRSASGLL 427
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
M + G E + N ++ LC + V +A L+ ++SE ++PN + Y +I+G+CD
Sbjct: 428 DEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDK 487
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G++ A +I M E +VV T
Sbjct: 488 GNIKSAYEIRTRM--EKCRKRANVV----------------------------------T 511
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
Y + I + C+ GK+ +A +L EM + + + +T +I G++ +G
Sbjct: 512 YNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 71/168 (42%), Gaps = 23/168 (13%)
Query: 285 TLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREM 340
++++++ GL+ R+ A K + PDI ++ +I GL R+ + R+A V +++
Sbjct: 158 SVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDI 217
Query: 341 IKRGCEPTMHTYIMLLQGHLGKRG---------------RKGPDPLVNFDTIFVGGLVKA 385
G P++ TY L+ G+ K G G P + + G K
Sbjct: 218 KAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKN 277
Query: 386 GKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN----EEGVVMFEEV 429
+ A + E + +G+ YN + + EEGV + EE+
Sbjct: 278 SNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEM 325
>gi|242075962|ref|XP_002447917.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
gi|241939100|gb|EES12245.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
Length = 550
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 123/260 (47%), Gaps = 8/260 (3%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
+F + + + V +K + M + GC N +V LC+ K V L+ +L
Sbjct: 220 SFNVVIKGVCRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRL 279
Query: 170 SE--WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINK 227
PN + Y +I GYC G + +A ++N M + G P+ + +I + K
Sbjct: 280 QRDGVCMPNVVTYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALD 339
Query: 228 DDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLS 287
+ A+++++ + ++R + T+ +ID C+ G++ A + +EM + I+ + T S
Sbjct: 340 MESAVRMYRQLILRRCPP-DVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFS 398
Query: 288 SIIYGLLARGRLREAYKVVEEIE-----KPDISLYHGLIKGLLRLRRAREATQVFREMIK 342
II+ L + R EA + E+ P +Y+ +I L + + EA + +M +
Sbjct: 399 IIIHSLCKQNRSAEALGFLRELNMRADIAPQTFIYNPVIDILCKGGQVEEANLIVTDMEE 458
Query: 343 RGCEPTMHTYIMLLQGHLGK 362
+GC P +TY +L+ GH K
Sbjct: 459 KGCHPDKYTYTILIIGHCMK 478
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 130/277 (46%), Gaps = 17/277 (6%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV--NDKTFKIALMTLAEVRELKKMVNF 130
++IT N +VD + +++ ++ + L+ + R + N T+ + + ++ ++
Sbjct: 252 DTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDALSV 311
Query: 131 FHIMNDCGCEYSLEMLNKVV----KTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKG 186
++ M + G + N ++ K L V + LIL+ P+ + + LI G
Sbjct: 312 YNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILR---RCPPDVVTFSSLIDG 368
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
YC G L +A +IW M +P++ +I + K N+ EA+ + + ++ D+
Sbjct: 369 YCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEALGFLRELNMRA--DI 426
Query: 247 GLST--YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA-- 302
T Y VID +CK G++ +A ++ +M ++G D T + +I G +GR+ EA
Sbjct: 427 APQTFIYNPVIDILCKGGQVEEANLIVTDMEEKGCHPDKYTYTILIIGHCMKGRIPEAIT 486
Query: 303 --YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVF 337
+K+VE +PD + I +L+ E Q+
Sbjct: 487 LFHKMVETGCRPDKITVNSFISCVLKAGMPNEVDQIM 523
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 100/215 (46%), Gaps = 10/215 (4%)
Query: 162 AKYLILKLSEWIK-----PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVD 216
A+ + WI+ P+ ++ +IKG C VG+ +A ++ MT+ G P +
Sbjct: 198 AQDAVALFESWIQDGLYSPDGWSFNVVIKGVCRVGNFQKALELVERMTEFGCSPDTITHN 257
Query: 217 KMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFK 276
+++ + + + + + ++ + + TY VI CK G++ A ++ +M +
Sbjct: 258 ILVDGLCRAKQVNRGHDLLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDALSVYNDMLE 317
Query: 277 RGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRARE 332
G + +T + +I G + A ++ ++ PD+ + LI G R + +
Sbjct: 318 SGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRRCPPDVVTFSSLIDGYCRCGQLDD 377
Query: 333 ATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKG 367
A ++++EM + +P ++T+ +++ L K+ R
Sbjct: 378 AMRIWKEMGQHHIQPNVYTFSIIIHS-LCKQNRSA 411
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 99/242 (40%), Gaps = 22/242 (9%)
Query: 210 PSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYT 269
PS +I + + +A+K+F M + + V G + A T
Sbjct: 109 PSEQSYSHVITLLCRSGRHRDALKLFDQMTDQSGYLPDAVFFSFVAGSCTNAGLLDAAVT 168
Query: 270 MLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE-----IEKPDISLYHGLIKGL 324
+L + + G + ++++ L+ARGR ++A + E + PD ++ +IKG+
Sbjct: 169 LLTKASQFGRRIEPYAYNNLLNLLIARGRAQDAVALFESWIQDGLYSPDGWSFNVVIKGV 228
Query: 325 LRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL-GKRGRKGPD------------PL 371
R+ ++A ++ M + GC P T+ +L+ G K+ +G D P
Sbjct: 229 CRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPN 288
Query: 372 VNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN----EEGVVMFE 427
V T + G KAG+ DA ++ G YN ++ Y E V M+
Sbjct: 289 VVTYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYR 348
Query: 428 EV 429
++
Sbjct: 349 QL 350
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 136/291 (46%), Gaps = 44/291 (15%)
Query: 65 KAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRE 123
K+ C + + +T+N ++D + K+R ++ + + M V N TF + L E
Sbjct: 212 KSHSC-SPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGE 270
Query: 124 LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGW 182
L+K + F M + GC+ + ++ LC+ + V++A+ L K+++ I P+ +AY
Sbjct: 271 LEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNS 330
Query: 183 LIKGYCDVGDLIEASKIWNLMTD-EGFEPSIDVVDKMIETFFKI---------------- 225
LI GYC G + EA K++ M+ G +P+I + +I+ F K+
Sbjct: 331 LIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTK 390
Query: 226 -------------------NKDDEAMKVFQMMRVKR--MDDLGLSTYRIVIDWMCKRGKI 264
K DEA++V++ MR K+ +D + ++ + +CK G I
Sbjct: 391 GLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSF---VGGLCKTGNI 447
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDIS 315
QAY + E K G + T + L+ GR+ +A K++E + DI+
Sbjct: 448 DQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARDIT 498
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 160/352 (45%), Gaps = 21/352 (5%)
Query: 34 NFNLTHEFFLQICNNFPLSWRPVYLFFQYT---QKAQPCFAH--------NSITFNRMVD 82
++ + E CN ++ V F + +KA+ + H ++++++ ++
Sbjct: 29 SYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIH 88
Query: 83 IIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEY 141
+ K +D + L EM R + + + + + LA+ R + + F M G
Sbjct: 89 GLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHP 148
Query: 142 SLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIW 200
M +++ LCQ V +A ++ + +PN Y L+ G C G L +A+ ++
Sbjct: 149 DRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLF 208
Query: 201 NLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCK 260
M P + + +++ K + +E K+F+ MR + T+ +I +C+
Sbjct: 209 AEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVP-NVITFSTLIHGLCR 267
Query: 261 RGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISL 316
G++ +A + M + G + + T +++I GL ++ +A ++ E++ + PD
Sbjct: 268 TGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVA 327
Query: 317 YHGLIKGLLRLRRAREATQVFREMI-KRGCEPTMHTYIMLLQG--HLGKRGR 365
Y+ LI G + EA +++REM G +PT+ T+ L+ G LGK GR
Sbjct: 328 YNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGR 379
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 94/192 (48%), Gaps = 9/192 (4%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
I N Y +IK E+ K+ M G P + + +++ F + N ++A
Sbjct: 6 IAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAR 65
Query: 233 KVFQMMRVK--RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
+V+Q M + D++ +Y I+I + K GK+ ++ +L EM RG SS++
Sbjct: 66 EVYQHMVESGYKPDNV---SYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLV 122
Query: 291 YGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
L R+ A + +E+ PD +++ LI GL + + ++A++ F++M K GC+
Sbjct: 123 RALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQ 182
Query: 347 PTMHTYIMLLQG 358
P + Y +LL G
Sbjct: 183 PNVPVYNVLLHG 194
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 88/185 (47%), Gaps = 22/185 (11%)
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG----RLREAYK- 304
TY +I + K K ++Y +LEEM G D + ++ G AR + RE Y+
Sbjct: 12 TYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGF-ARSNNMEKAREVYQH 70
Query: 305 VVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG------ 358
+VE KPD YH LI GL ++ + E+ ++ EM+ RG P+M Y L++
Sbjct: 71 MVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARR 130
Query: 359 --HLGK------RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY 410
H RG PD L+ ++ I GL +AGK DA++ +++ G + Y
Sbjct: 131 VDHASSLFDEMIRGGHHPDRLMFYELIL--GLCQAGKVKDASERFKQMPKHGCQPNVPVY 188
Query: 411 NKFLH 415
N LH
Sbjct: 189 NVLLH 193
>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 539
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 157/351 (44%), Gaps = 25/351 (7%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
TF I + A++ ++ + + G + + +L ++K LC + V+EA L L
Sbjct: 107 TFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAVSL---L 163
Query: 170 SEWI----KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI 225
E++ + +E+ YG +I G C +G +A +++ M P++ + + +I+ K
Sbjct: 164 HEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQ 223
Query: 226 NKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRG-IEADNL 284
DEA + M V+ +L + +Y +I C G+ A +L+EM RG + D
Sbjct: 224 GLVDEACGLCTEM-VENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVY 282
Query: 285 TLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREM 340
T + +I GL GR+ EAY VV + K PDI Y+ L+ G EA QVF +M
Sbjct: 283 TFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKM 342
Query: 341 IKRGCEPTMHTYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKS 388
++R P + +Y L+ G+ L + K P + GL K+G+S
Sbjct: 343 VERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRS 402
Query: 389 LDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLA 439
L VE + G YN L Y E + + + E+G++
Sbjct: 403 LYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGIS 453
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 139/308 (45%), Gaps = 7/308 (2%)
Query: 65 KAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRE 123
+++P + ITF+ +++ + + + L + + D LM L
Sbjct: 96 QSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGR 155
Query: 124 LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGW 182
+ + V+ H D G + ++ LC+ +A + K+ + + PN I Y
Sbjct: 156 VLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNT 215
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
+I G C G + EA + M + G E + + MI F + + A+K+ M V+
Sbjct: 216 VIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRG 275
Query: 243 MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
+ T+ I+ID +CK G++S+AY ++ M KRG + D ++ ++++ G G + EA
Sbjct: 276 KVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEA 335
Query: 303 YKV----VEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+V VE P++ Y LI G ++R EA + EM + P TY LL G
Sbjct: 336 KQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDG 395
Query: 359 HLGKRGRK 366
L K GR
Sbjct: 396 -LSKSGRS 402
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 118/256 (46%), Gaps = 43/256 (16%)
Query: 146 LNKVVKTLCQ--RKLVVEAKYLILKLSEWIKPNEIAYGWLI------------------- 184
NK++ TL + R V + Y IL+ IKP+ I + LI
Sbjct: 72 FNKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNI 131
Query: 185 ----------------KGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
KG C G ++EA + + D GF +I KI K
Sbjct: 132 LKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKT 191
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
+A+++F M+ R+ L Y VID +CK+G + +A + EM + GIE D + +S
Sbjct: 192 RDAIQMFPKMKKIRVYP-NLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNS 250
Query: 289 IIYGLLARGRLREAYKVVEEI-----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
+I+G + GR + A K+++E+ PD+ ++ LI GL +L R EA V MIKR
Sbjct: 251 MIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKR 310
Query: 344 GCEPTMHTYIMLLQGH 359
G +P + +Y L+ G+
Sbjct: 311 GWKPDIVSYNALMNGY 326
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 113/225 (50%), Gaps = 9/225 (4%)
Query: 146 LNKVVKTLCQRKLVVEAKYLILKLSE--WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLM 203
N ++ LC+ V EA ++ + + W KP+ ++Y L+ GYC G + EA ++++ M
Sbjct: 284 FNILIDGLCKLGRVSEAYNVVAVMIKRGW-KPDIVSYNALMNGYCLSGSVGEAKQVFDKM 342
Query: 204 TDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGK 263
+ P++ +I + K+ DEAM + M K + TY ++D + K G+
Sbjct: 343 VERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVP-DTVTYNCLLDGLSKSGR 401
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHG 319
+ ++E M G AD +T + ++ + +A + + I + P+I Y+
Sbjct: 402 SLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNI 461
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
L+ GL + R + A ++F+ + +GC+P + TY +++ G L K G
Sbjct: 462 LLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHG-LCKEG 505
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 113/260 (43%), Gaps = 49/260 (18%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
TF I + L ++ + + N +M G + + N ++ C V EAK + K+
Sbjct: 283 TFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKM 342
Query: 170 SEWIK-PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSI---------------- 212
E PN I+Y LI GYC V + EA + M ++ P
Sbjct: 343 VERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRS 402
Query: 213 ----DVVDKM---------------IETFFKINKDDEAMKVFQMMRVKRMDDLGLS---- 249
D+V+ M ++ +FK K D+A+ +FQ + ++G+S
Sbjct: 403 LYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQ-----HIIEIGISPNIR 457
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA----YKV 305
TY I++D +CK G++ A + + + +G + + T + +I+GL G L EA YK+
Sbjct: 458 TYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKM 517
Query: 306 VEEIEKPDISLYHGLIKGLL 325
V P+ + +++ +L
Sbjct: 518 VNNNYLPNYITFDTIVRAIL 537
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 146/293 (49%), Gaps = 24/293 (8%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLSE--WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
N V+ C R V A ++ ++ E I PN+ YG +I G+C VG + EA K+++ M
Sbjct: 518 NTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEML 577
Query: 205 DEG-FEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGK 263
+G +P + + +I + K D A+ +++ V+R + ++TY +++ + G+
Sbjct: 578 TKGEVKPEAVMYNALIGGYCDQGKLDTAL-LYRDRMVERGVAMTVATYNLLVHALFMDGR 636
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHG 319
++AY ++EEM +G+ D T + +I G G +++A ++ E + + + Y
Sbjct: 637 GTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTA 696
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------------LG--KRGR 365
LI L + + +E ++F E ++RG P + Y L+ H +G ++ R
Sbjct: 697 LIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR 756
Query: 366 KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYS 418
PD V ++T+ + GL G+ +A K ++ + RG++ YN + YS
Sbjct: 757 IAPDD-VTYNTL-MRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYS 807
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 131/300 (43%), Gaps = 52/300 (17%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
+KP + Y LI GYCD G L A + M + G ++ + ++ F + EA
Sbjct: 582 VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAY 641
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
++ + M K + + TY I+I+ CK G + +A + E M +RG+ A +T +++IY
Sbjct: 642 ELVEEMGGKGLAP-DVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYA 700
Query: 293 LLARGRLRE-----------------------------------AYKVVEEIEK----PD 313
L +G+++E A++++ E+EK PD
Sbjct: 701 LSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPD 760
Query: 314 ISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG--------- 364
Y+ L++GL L R EA ++ EM +RG +P + TY L+ G+ K
Sbjct: 761 DVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRN 820
Query: 365 ---RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEE 421
KG +P + + GL K G+ DA V+ ++ G+ Y + + E+
Sbjct: 821 EMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTED 880
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 107/225 (47%), Gaps = 9/225 (4%)
Query: 146 LNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N +++ LC A L+ ++ +PN + Y +I G+C G + A I M +
Sbjct: 486 FNIMLRHLCSAGKPARALELLRQMP---RPNAVTYNTVIAGFCSRGRVQAALDIMREMRE 542
Query: 206 E-GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
G P+ +I + K+ + DEA+KVF M K Y +I C +GK+
Sbjct: 543 RGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKL 602
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGL 320
A + M +RG+ T + +++ L GR EAY++VEE+ PD+ Y+ L
Sbjct: 603 DTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNIL 662
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
I G + ++A ++F M +RG T+ TY L+ L K+G+
Sbjct: 663 INGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYA-LSKKGQ 706
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 117/233 (50%), Gaps = 7/233 (3%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLIEA 196
G ++ N +V L EA L+ ++ + + P+ Y LI G+C G++ +A
Sbjct: 616 GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKA 675
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVID 256
+I+ M+ G ++ +I K + E K+F V+R L Y +I+
Sbjct: 676 LEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEA-VRRGIRPDLVLYNALIN 734
Query: 257 WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KP 312
G I +A+ ++ EM K+ I D++T ++++ GL GR+ EA K+++E+ +P
Sbjct: 735 SHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQP 794
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
D+ Y+ LI G ++A ++ EM+ +G PT+ TY L+QG L K G+
Sbjct: 795 DLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQG-LCKNGQ 846
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 110/219 (50%), Gaps = 10/219 (4%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N ++ C+ V +A + +S ++ + Y LI G + E K+++
Sbjct: 660 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVR 719
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM--DDLGLSTYRIVIDWMCKRGK 263
G P + + + +I + D A ++ M KR+ DD+ TY ++ +C G+
Sbjct: 720 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV---TYNTLMRGLCLLGR 776
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHG 319
+ +A +++EM +RGI+ D +T +++I G +G +++A ++ E+ P + Y+
Sbjct: 777 VDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNA 836
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
LI+GL + + +A + +EM++ G P TYI L++G
Sbjct: 837 LIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEG 875
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 107/226 (47%), Gaps = 3/226 (1%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMV 128
A + T+N +++ K N+ E + M RR + T+ + L++ ++++
Sbjct: 652 LAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETD 711
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGY 187
F G L + N ++ + + A ++ ++ + I P+++ Y L++G
Sbjct: 712 KLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGL 771
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C +G + EA K+ + MT+ G +P + + +I + +A+++ M K +
Sbjct: 772 CLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPT- 830
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
L TY +I +CK G+ A M++EM + GI D+ T S+I GL
Sbjct: 831 LLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 876
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 80/187 (42%), Gaps = 18/187 (9%)
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKR-GIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY VI C RG++ A ++ EM +R GI + T ++I G GR+ EA KV +E
Sbjct: 516 TYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDE 575
Query: 309 I-----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG----- 358
+ KP+ +Y+ LI G + A M++RG T+ TY +L+
Sbjct: 576 MLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDG 635
Query: 359 -------HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
+ + G KG P V I + G K G A + E + RGV Y
Sbjct: 636 RGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYT 695
Query: 412 KFLHYYS 418
++ S
Sbjct: 696 ALIYALS 702
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 95/225 (42%), Gaps = 28/225 (12%)
Query: 241 KRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
RM L L + + + A+ + +MF+ + T + ++ L + G+
Sbjct: 441 SRMKSLSLPISTASLHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPA 500
Query: 301 EAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKR-GCEPTMHTYIMLLQG- 358
A +++ ++ +P+ Y+ +I G R + A + REM +R G P +TY ++ G
Sbjct: 501 RALELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGW 560
Query: 359 -HLGK-------------RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVE 404
+G+ +G P+ ++ +GG GK A Y +R++ RGV
Sbjct: 561 CKVGRVDEAVKVFDEMLTKGEVKPEAVMY--NALIGGYCDQGKLDTALLYRDRMVERGVA 618
Query: 405 VPRFDYNKFLHYY----SNEEGVVMFEEVGKKLREVGLADLADIF 445
+ YN +H E + EE+G K GLA D+F
Sbjct: 619 MTVATYNLLVHALFMDGRGTEAYELVEEMGGK----GLA--PDVF 657
>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Brachypodium distachyon]
Length = 627
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 156/311 (50%), Gaps = 24/311 (7%)
Query: 149 VVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEG 207
+++ LC + +A L+ + + ++P+ + YG LI+G CD D+ +A ++ M + G
Sbjct: 119 LMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESG 178
Query: 208 FEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQA 267
EP++ V +++ + K + + KVF+ M + ++ + Y +ID +C+ GK+ +A
Sbjct: 179 IEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEP-DVVMYTGLIDSLCREGKVKKA 237
Query: 268 YTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISL----YHGLIKG 323
++++M +RG+E + +T + +I + G ++EA + + + ++L Y+ LI G
Sbjct: 238 TQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITG 297
Query: 324 LLRLRRAREATQVFREMI--KRGCEPTMHTYIMLLQGHLGKRGR--------------KG 367
L + EA + EMI + EP + T+ ++ G L K GR
Sbjct: 298 LSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHG-LCKTGRMRQAFQVRDMMAENGC 356
Query: 368 PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFE 427
LV F+ + +GGL++ K A + ++ + + G+E F Y+ ++ + V E
Sbjct: 357 ACNLVTFN-LLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAE 415
Query: 428 EVGKKLREVGL 438
+ K+R G+
Sbjct: 416 SLLSKMRRDGI 426
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/380 (21%), Positives = 166/380 (43%), Gaps = 31/380 (8%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHI 133
+ + ++D + + + + + +M R L N T+ + + ++ + +K+ ++ +
Sbjct: 219 VMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNN 278
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL---SEWIKPNEIAYGWLIKGYCDV 190
M + G N ++ L + EA L+ ++ ++PN + + +I G C
Sbjct: 279 MLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKT 338
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G + +A ++ ++M + G ++ + +I +++K +AM++ M ++ T
Sbjct: 339 GRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSF-T 397
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y I+I+ CK ++ +A ++L +M + GIE + + ++ L +G + +A +E+
Sbjct: 398 YSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMH 457
Query: 311 KP---DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL-----QGHLGK 362
K D+ Y +I G RLR + A + + M+ G P TY ML+ G LG
Sbjct: 458 KNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGA 517
Query: 363 RGR-------KG--PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
R G PD V FD++ G G D K +E + + D
Sbjct: 518 AERVLKQMTASGFVPDVAV-FDSLIKG----YGAKGDTEKVLELIREMTAKDIALDSKII 572
Query: 414 LHYYS----NEEGVVMFEEV 429
Y+ N EG + + V
Sbjct: 573 STIYTCLVANNEGKALLQSV 592
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 18/207 (8%)
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
+Y V+ +C++G A L + ++ ++++ L A R +A ++ ++
Sbjct: 80 SYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRDM 139
Query: 310 E----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
+ +PD+ Y LI+GL +A ++ REM + G EP + Y LLQG+ K GR
Sbjct: 140 QASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYC-KAGR 198
Query: 366 -------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNK 412
+G +P V T + L + GK A + ++++M RG+E YN
Sbjct: 199 WECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNV 258
Query: 413 FLHYYSNEEGVVMFEEVGKKLREVGLA 439
++ E V + + E G+A
Sbjct: 259 LINSMCKEGSVKEAMSLRNNMLEKGVA 285
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 122/281 (43%), Gaps = 10/281 (3%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV---NDKTFKIALMTLAEVRELKKM 127
A +++T+N ++ + +D L+EM + N TF + L + +++
Sbjct: 285 ALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQA 344
Query: 128 VNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKG 186
+M + GC +L N ++ L + V +A L+ ++ S ++P+ Y LI G
Sbjct: 345 FQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILING 404
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
+C + + A + + M +G EP + ++ + ++A F M + L
Sbjct: 405 FCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMH--KNCKL 462
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
+ Y +I C+ A L+ M G+ D++T S +I G L A +V+
Sbjct: 463 DVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVL 522
Query: 307 EEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
+++ PD++++ LIKG + ++ REM +
Sbjct: 523 KQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAK 563
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 85/189 (44%), Gaps = 6/189 (3%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVNFF 131
+S T++ +++ K +D L +M R + + I L+ L E +++ NFF
Sbjct: 394 DSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFF 453
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQ-RKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDV 190
M+ C+ + + ++ C+ R ++L L E + P+ + Y LI + +
Sbjct: 454 DEMHK-NCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANS 512
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
GDL A ++ MT GF P + V D +I+ + + KV +++R D+ L +
Sbjct: 513 GDLGAAERVLKQMTASGFVPDVAVFDSLIKGY---GAKGDTEKVLELIREMTAKDIALDS 569
Query: 251 YRIVIDWMC 259
I + C
Sbjct: 570 KIISTIYTC 578
>gi|115475535|ref|NP_001061364.1| Os08g0248400 [Oryza sativa Japonica Group]
gi|113623333|dbj|BAF23278.1| Os08g0248400, partial [Oryza sativa Japonica Group]
Length = 440
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 117/226 (51%), Gaps = 9/226 (3%)
Query: 145 MLNKVVKTLCQRKLVVEAKYLILK-LSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNL 202
+ ++K+LC K A ++L+ ++E P+ +Y L+KG C EA ++ ++
Sbjct: 135 IFTPLLKSLCAEKRTSNAMNIVLRRMTELGCAPHVFSYNILLKGLCHESRSQEALELLHM 194
Query: 203 MTDEGFEPSIDVV--DKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCK 260
M D+G + DVV +I+ FK D+A + M ++R + TY ++ +CK
Sbjct: 195 MADDGGDCPPDVVSYSTIIDGLFKEGDSDKAYSTYHEM-LERGILPDVVTYNTIVAALCK 253
Query: 261 RGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISL 316
+ +A +L M K G+ D +T +SI++G + G+ +EA ++E++ +PD
Sbjct: 254 AQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVT 313
Query: 317 YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
Y L+ L + R EA ++ MIKRG +P + TY LL G+ K
Sbjct: 314 YTSLMDYLCKNGRCIEARKILDSMIKRGLKPNVITYSTLLHGYATK 359
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 130/295 (44%), Gaps = 26/295 (8%)
Query: 119 AEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE---WIKP 175
AE R M M + GC + N ++K LC EA L+ +++ P
Sbjct: 145 AEKRTSNAMNIVLRRMTELGCAPHVFSYNILLKGLCHESRSQEALELLHMMADDGGDCPP 204
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
+ ++Y +I G GD +A ++ M + G P + + ++ K D+AM V
Sbjct: 205 DVVSYSTIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVL 264
Query: 236 -QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
+M++ M D TY ++ C G+ +A +LE+M G+E D +T +S++ L
Sbjct: 265 NRMVKNGVMPD--CITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLC 322
Query: 295 ARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
GR EA K+++ + KP++ Y L+ G E + M++ G +P H
Sbjct: 323 KNGRCIEARKILDSMIKRGLKPNVITYSTLLHGYATKGALVEMRDLLDLMVRNGIQPDRH 382
Query: 351 TYIMLLQGHLG--------------KRGRKGPDPLVNFDTIFVGGLVKAGKSLDA 391
+ +L+ ++ R PD +V + T+ + GL K+G+ DA
Sbjct: 383 VFSILICACTKHQNVDVAMFVFSKMRQQRLTPD-VVTYGTL-IDGLCKSGRVDDA 435
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 3/200 (1%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+T+N +V + K++ +D + L M + ++ D T+ + + K+ +
Sbjct: 242 VTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEK 301
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDVGD 192
M G E ++ LC+ +EA K L + +KPN I Y L+ GY G
Sbjct: 302 MCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIKRGLKPNVITYSTLLHGYATKGA 361
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
L+E + +LM G +P V +I K D AM VF MR +R+ + TY
Sbjct: 362 LVEMRDLLDLMVRNGIQPDRHVFSILICACTKHQNVDVAMFVFSKMRQQRLTP-DVVTYG 420
Query: 253 IVIDWMCKRGKISQAYTMLE 272
+ID +CK G++ A LE
Sbjct: 421 TLIDGLCKSGRVDDAMLNLE 440
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 102/211 (48%), Gaps = 7/211 (3%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
L I P+ + Y ++ C + +A + N M G P + ++ + +
Sbjct: 233 LERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQS 292
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
EA+ + + M ++ + TY ++D++CK G+ +A +L+ M KRG++ + +T S+
Sbjct: 293 KEAIGILEKMCSDGVEPDAV-TYTSLMDYLCKNGRCIEARKILDSMIKRGLKPNVITYST 351
Query: 289 IIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+++G +G L E +++ + + PD ++ LI + + A VF +M ++
Sbjct: 352 LLHGYATKGALVEMRDLLDLMVRNGIQPDRHVFSILICACTKHQNVDVAMFVFSKMRQQR 411
Query: 345 CEPTMHTYIMLLQGHLGKRGRKGPDPLVNFD 375
P + TY L+ G L K GR D ++N +
Sbjct: 412 LTPDVVTYGTLIDG-LCKSGRVD-DAMLNLE 440
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 113/276 (40%), Gaps = 36/276 (13%)
Query: 214 VVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG----LSTYRIVIDWMCKRGKISQAYT 269
++ + + +D A V R+ R D L TY I+I C+ G++ +
Sbjct: 60 IIRSLNRALAAVARDSPAAAVSGFNRMARSSDGAVTPTLHTYGILIGCCCRAGRLDLGFA 119
Query: 270 MLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV-----EEIEKPDISLYHGLIKGL 324
L + K+G + + + ++ L A R A +V E P + Y+ L+KGL
Sbjct: 120 GLGNVIKKGYRVEPIIFTPLLKSLCAEKRTSNAMNIVLRRMTELGCAPHVFSYNILLKGL 179
Query: 325 LRLRRAREATQVFREMIKRG--CEPTMHTYIMLLQGHLGKRGRKG--------------- 367
R++EA ++ M G C P + +Y ++ G L K G
Sbjct: 180 CHESRSQEALELLHMMADDGGDCPPDVVSYSTIIDG-LFKEGDSDKAYSTYHEMLERGIL 238
Query: 368 PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYS----NEEGV 423
PD +V ++TI V L KA A + R++ GV YN +H Y ++E +
Sbjct: 239 PD-VVTYNTI-VAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAI 296
Query: 424 VMFEEV---GKKLREVGLADLADIFQRYGKKMATRE 456
+ E++ G + V L D + G+ + R+
Sbjct: 297 GILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARK 332
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 144/337 (42%), Gaps = 53/337 (15%)
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYC 188
F+ + DCG + N ++ LC+ + EA+ L ++ + ++P +++ LI GYC
Sbjct: 212 FYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYC 271
Query: 189 DVGDLIE-----------------------------------ASKIWNLMTDEGFEPSID 213
G+L + A+K++ M D G P+
Sbjct: 272 KSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDV 331
Query: 214 VVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEE 273
+I + D M+++Q M K + + TY +I+ +CK G + +A ++ E
Sbjct: 332 TFTTLINGHCVTGRADLGMEIYQQMLRKGVKP-DVITYNTLINGLCKVGDLREAKKLVIE 390
Query: 274 MFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISL----YHGLIKGLLRLRR 329
M +RG++ D T + +I G G L A ++ +E+ K I L + LI G R +
Sbjct: 391 MTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQ 450
Query: 330 AREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK------------GPDPLVNFDTI 377
EA + REM++ G +P TY M++ G K K G P V +
Sbjct: 451 VIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNV 510
Query: 378 FVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
+ GL K G+ +A ++ ++N GV YN L
Sbjct: 511 LLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILL 547
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 123/283 (43%), Gaps = 25/283 (8%)
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
+ + + L+ Y D G +A + + L+ + + + K+N A +
Sbjct: 154 SNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFY 213
Query: 236 QMMRVKRMDDLG----LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
+ + D G + + +++ +CK KI++A + E+ KRG+ ++ +++I
Sbjct: 214 E-----EILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLIN 268
Query: 292 GLLARGRLREAYKV----VEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
G G L + +++ +E PD+ Y LI GL + + +A ++F EM RG P
Sbjct: 269 GYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVP 328
Query: 348 TMHTYIMLLQGH-------LG-----KRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYV 395
T+ L+ GH LG + RKG P V + GL K G +A K V
Sbjct: 329 NDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLV 388
Query: 396 ERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
+ RG++ +F Y + E + E+ K++ + G+
Sbjct: 389 IEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGI 431
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 144/337 (42%), Gaps = 53/337 (15%)
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYC 188
F+ + DCG + N ++ LC+ + EA+ L ++ + ++P +++ LI GYC
Sbjct: 212 FYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYC 271
Query: 189 DVGDLIE-----------------------------------ASKIWNLMTDEGFEPSID 213
G+L + A+K++ M D G P+
Sbjct: 272 KSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDV 331
Query: 214 VVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEE 273
+I + D M+++Q M K + + TY +I+ +CK G + +A ++ E
Sbjct: 332 TFTTLINGHCVTGRADLGMEIYQQMLRKGVKP-DVITYNTLINGLCKVGDLREAKKLVIE 390
Query: 274 MFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISL----YHGLIKGLLRLRR 329
M +RG++ D T + +I G G L A ++ +E+ K I L + LI G R +
Sbjct: 391 MTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQ 450
Query: 330 AREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK------------GPDPLVNFDTI 377
EA + REM++ G +P TY M++ G K K G P V +
Sbjct: 451 VIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNV 510
Query: 378 FVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
+ GL K G+ +A ++ ++N GV YN L
Sbjct: 511 LLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILL 547
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 123/283 (43%), Gaps = 25/283 (8%)
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
+ + + L+ Y D G +A + + L+ + + + K+N A +
Sbjct: 154 SNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFY 213
Query: 236 QMMRVKRMDDLG----LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
+ + D G + + +++ +CK KI++A + E+ KRG+ ++ +++I
Sbjct: 214 E-----EILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLIN 268
Query: 292 GLLARGRLREAYKV----VEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
G G L + +++ +E PD+ Y LI GL + + +A ++F EM RG P
Sbjct: 269 GYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVP 328
Query: 348 TMHTYIMLLQGH-------LG-----KRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYV 395
T+ L+ GH LG + RKG P V + GL K G +A K V
Sbjct: 329 NDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLV 388
Query: 396 ERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
+ RG++ +F Y + E + E+ K++ + G+
Sbjct: 389 IEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGI 431
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 122/284 (42%), Gaps = 46/284 (16%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND----KTFKIALMTLAEVRELKKMV 128
N +TF +++ + DL E Q+M R+ + D T L + ++RE KK+V
Sbjct: 329 NDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLV 388
Query: 129 -----------NFFHIMNDCGC------EYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE 171
F + M GC E +LE+ ++VK E
Sbjct: 389 IEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVK-------------------E 429
Query: 172 WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEA 231
I+ + +A+ LI G+C G +IEA + M + G +P +I F K
Sbjct: 430 GIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTG 489
Query: 232 MKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
K+ + M+ G+ TY ++++ +CK+G++ A +L+ M G+ D++T + ++
Sbjct: 490 FKLLKEMQCDGHVP-GVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLE 548
Query: 292 GLLARGRLREAYKVVEEIEK---PDISLYHGLIKGLLRLRRARE 332
G G RE + ++ EK D Y LI L + + R+
Sbjct: 549 GHCKHGN-REDFDKLQS-EKGLVQDYGSYTSLIGDLRKTCKERQ 590
>gi|297720523|ref|NP_001172623.1| Os01g0816000 [Oryza sativa Japonica Group]
gi|56785065|dbj|BAD82704.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|125572420|gb|EAZ13935.1| hypothetical protein OsJ_03862 [Oryza sativa Japonica Group]
gi|255673815|dbj|BAH91353.1| Os01g0816000 [Oryza sativa Japonica Group]
Length = 530
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 99/461 (21%), Positives = 186/461 (40%), Gaps = 36/461 (7%)
Query: 2 PVDPGHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQ 61
P D V + ++ +R L C + + + + S + F+
Sbjct: 76 PPDVARDVEAVVGAAEGFHADAARARGLLERCGATASEPVVVAVLDRLRNSCAAAHAAFR 135
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEV 121
+ AQP +A + M+ I+ K R D L +M R L + + +
Sbjct: 136 WAS-AQPGYAPGRHACHSMLAILAKHRRFDDARALLDQMRRSSLASPAAVMLLIRRYCAA 194
Query: 122 RELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYG 181
R++ V F + + G + + ++ LC+ K V +A++L+L + ++
Sbjct: 195 RDVAGAVAAFRALPNLGFRPGVAEFHGLLTALCRYKNVQDAEHLLLSSEKEFPFETKSFN 254
Query: 182 WLIKGYCD-VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
++ G+C+ V + EA + WN M +G + + MI F K D MK+F
Sbjct: 255 VVLNGWCNMVRSVREAKRFWNAMEIKGIKRDVVSYGSMISCFSKAGSLDTVMKLFN---- 310
Query: 241 KRMDDLGL----STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR 296
RM + G+ Y V+ + K +++A ++ M ++G+ D T +S+I L
Sbjct: 311 -RMKEAGVIPDRKIYNAVVYALAKGQCVNEAKALVRSMEEKGVAPDTATFNSLIRPLCKA 369
Query: 297 GRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVF---REMIKRGCEPTM 349
+++EA K+++++ P + +H L L AR +VF +M + C+P M
Sbjct: 370 RQVQEARKMLDDMLGRGLSPSVRTFHAL------LDVARSPIEVFDLLDKMKELQCDPEM 423
Query: 350 HTYIMLLQGHLGKRGR------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVER 397
T+IML++ R G P + + + GL G+ ++AKY E
Sbjct: 424 DTFIMLIRKFCRWRQHDSVEKLWSAMPANGLSPDRSAYIVLIHGLFLNGRLEESAKYYEE 483
Query: 398 VMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
+ +G + + S E VG + V L
Sbjct: 484 MKAKGFPPEKKTEEMIQAWLSGRELAKASASVGSRGGSVSL 524
>gi|410109919|gb|AFV61039.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
duartei]
Length = 412
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 136/288 (47%), Gaps = 41/288 (14%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T + L L +++ K + F+ + +CG SL N ++ C+ + A+ + +
Sbjct: 90 TCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAI 149
Query: 170 SEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++W ++P+ ++Y L+ GY GDL E + + M G +P + +I K +K
Sbjct: 150 TKWGLRPSVVSYNTLMNGYIRXGDLDEGFXLKSXMLASGVQPDVYTYSVLINGLCKESKM 209
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
D+A ++F M VK + G+ T+ +ID CK G++ A + ++M + + D +T ++
Sbjct: 210 DDANELFDEMLVKGLVPNGV-TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 268
Query: 289 IIYGLLARGRLREAYKVVEEIE----KPD------------------------------- 313
+IYGL +G L++A+ +++E+ KPD
Sbjct: 269 LIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLINGCCKEGDLDSAFEHRKRMIQEN 328
Query: 314 ISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
I L Y LI G + R+ +A ++ REM+ G +P TY M++
Sbjct: 329 IRLDEVAYTALISGXCQEGRSVDAEKMLREMLSVGLKPDARTYTMIIN 376
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 74/177 (41%), Gaps = 37/177 (20%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKM---- 127
N +TF ++D K+ +DL E ++M + L D T+ + L + +LK+
Sbjct: 227 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLI 286
Query: 128 ------------VNFFHIMNDCGCEYSLEM--------------LNKVVKT-----LCQR 156
+ + ++N C E L+ L++V T CQ
Sbjct: 287 DEMSVKGLKPDKITYTTLINGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGXCQE 346
Query: 157 KLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSI 212
V+A+ ++ + LS +KP+ Y +I +C GD+ SK+ M +G PS+
Sbjct: 347 GRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKXGDVWXGSKLLKEMQRDGHVPSV 403
>gi|410109889|gb|AFV61024.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
camara]
Length = 431
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 137/288 (47%), Gaps = 41/288 (14%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T + L L +++ K + F+ + +CG SL N ++ C+ + A+ + +
Sbjct: 109 TCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAI 168
Query: 170 SEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++W ++P+ ++Y L+ GY +GDL E ++ + M G +P + +I K +K
Sbjct: 169 TKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKM 228
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
D A +F M VK + G+ T+ +ID CK G++ A + ++M + + D +T ++
Sbjct: 229 DGANGLFDEMLVKGLVPNGV-TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNT 287
Query: 289 IIYGLLARGRLREAYKVVEEIE----KPD------------------------------- 313
+IYGL +G L++A+ +++E+ KPD
Sbjct: 288 LIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQEN 347
Query: 314 ISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
I L Y LI GL + R+ +A ++ REM+ G +P TY M++
Sbjct: 348 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVN 395
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 93/222 (41%), Gaps = 38/222 (17%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
N +TF ++D K+ +DL E ++M + L+ D
Sbjct: 246 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPD------------------------ 281
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVG 191
L N ++ LC++ + +A LI ++S + +KP++ Y LI G C G
Sbjct: 282 ----------LITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEG 331
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLST 250
DL A + M E +I + + +A K+ +M+ V D G T
Sbjct: 332 DLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTG--T 389
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
Y ++++ CK+G + + +L+EM + G +T + ++ G
Sbjct: 390 YTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 431
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 147/339 (43%), Gaps = 37/339 (10%)
Query: 76 TFNRMVDIIGKSRNID---LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
T+ +VD + K++ I E + G + T+ L L ++ L++ ++
Sbjct: 36 TYTTIVDWLAKNKKIQEAVALMEKITANGCTPTI--ATYNALLNGLCKMGRLEEAIDLLR 93
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVG 191
+ D GC + ++ L ++K EA L ++ S + + + Y LI+G G
Sbjct: 94 KIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAG 153
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS-- 249
+ +AS ++ MT +G P + + MI+ K + A+++F+ M + GL+
Sbjct: 154 KIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEAR-----GLAPN 208
Query: 250 --TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
Y +I +CK K+ A ML +M K D +T + +I GL G + A +
Sbjct: 209 EVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFD 268
Query: 308 EI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG----- 358
E+ KPD+ Y+ LI G + A VF +M C P + TY L+ G
Sbjct: 269 EMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRR 328
Query: 359 ----------HLGKRGRKGPDPLVNFDTIFVGGLVKAGK 387
H+ +RG PD V + V GL K+GK
Sbjct: 329 QLTKASLYYQHMKERGCP-PDSFVY--SSLVDGLCKSGK 364
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 130/307 (42%), Gaps = 29/307 (9%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
TF I + L + L + + GC + +V L + K + EA L+ K+
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60
Query: 170 S-EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
+ P Y L+ G C +G L EA + + D G P + +I+ K +
Sbjct: 61 TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
EA K+F+ M + + L Y +I + + GKI QA ++ + M +G D +TLS+
Sbjct: 121 FEAYKLFKEMASRGLA-LDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLST 179
Query: 289 IIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+I GL GR+ A ++ + +E P+ +Y LI GL + R+ A ++ +M K
Sbjct: 180 MIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAF 239
Query: 345 CEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVE 404
C P TY I + GL K+G A + + ++ G +
Sbjct: 240 CTPDTITY-----------------------NILIDGLCKSGDVAAARAFFDEMLEAGCK 276
Query: 405 VPRFDYN 411
+ YN
Sbjct: 277 PDVYTYN 283
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 126/310 (40%), Gaps = 41/310 (13%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALM-TLAEVRELKKMVNFFHI 133
+T+ ++D +GK + ++ +EM R L D AL+ L + ++ + + +
Sbjct: 105 VTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKT 164
Query: 134 MNDCGCEYSLEMLNKVVKTLCQ------------------------------------RK 157
M GC + L+ ++ LC+ RK
Sbjct: 165 MTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARK 224
Query: 158 LVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDK 217
+ + L + P+ I Y LI G C GD+ A ++ M + G +P + +
Sbjct: 225 MDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNI 284
Query: 218 MIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKR 277
+I F K D A VF M R + TY +I +CKR ++++A + M +R
Sbjct: 285 LISGFCKAGNTDAACGVFDDMSSSRCSP-NVVTYGTLISGLCKRRQLTKASLYYQHMKER 343
Query: 278 GIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISLYHG---LIKGLLRLRRAREAT 334
G D+ SS++ GL G+L + +E+E+ ++ LI L + R EA
Sbjct: 344 GCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIFHLCKANRVDEAV 403
Query: 335 QVFREMIKRG 344
+F + K G
Sbjct: 404 SLFNAIRKEG 413
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 90/206 (43%), Gaps = 9/206 (4%)
Query: 73 NSITFNRMVDIIGKSRNIDL---FWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
++IT+N ++D + KS ++ F++ + E G + V T+ I + +
Sbjct: 243 DTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDV--YTYNILISGFCKAGNTDAACG 300
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYC 188
F M+ C ++ ++ LC+R+ + +A + E P+ Y L+ G C
Sbjct: 301 VFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLC 360
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
G L +++ M G S ++I K N+ DEA+ +F +R + M
Sbjct: 361 KSGKLEGGCMLFDEMERSGVANS-QTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHP-- 417
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEM 274
Y +I + K GK+++ + +EM
Sbjct: 418 YAYNSIISALIKSGKVNEGQAVYQEM 443
>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 804
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 143/297 (48%), Gaps = 19/297 (6%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHI 133
++ N ++D++ K +L+W+ L+E+ R ++ F + + A++ ++K V F +
Sbjct: 92 VSHNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEM 151
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYL---ILKLSEWIKPNEIAYGWLIKGYCDV 190
M D C+ + N V+ + ++++V+ A + +LKL+ PN + LI G C
Sbjct: 152 MKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLN--CLPNIATFSILIDGMCKS 209
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL-- 248
G A ++++ MT P+ +I + K D A ++F M+ D G
Sbjct: 210 GKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMK-----DHGCIP 264
Query: 249 --STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY--- 303
TY ++ CK G++ +A +L+ K D S +I GL R +A
Sbjct: 265 DSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWY 324
Query: 304 -KVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
K+ E KPD+ LY ++KGL + + ++A ++ EM +RG P H Y L++G+
Sbjct: 325 RKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGY 381
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 120/259 (46%), Gaps = 17/259 (6%)
Query: 111 FKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS 170
+ I + L++ + K + + M + G N ++K C L+ EAK L L++S
Sbjct: 339 YTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEIS 398
Query: 171 EW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD 229
+ + Y LI G C G + +A +I+N M G PS+ + +I+ F K +
Sbjct: 399 KNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIE 458
Query: 230 EAMKVFQMMRVKRMDDLGL------------STYRIVIDWMCKRGKISQAYTMLEEMFKR 277
+A +F M + R L L ++ + +++ +C G I +AY +L ++
Sbjct: 459 KAQLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDS 518
Query: 278 GIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREA 333
G + +T + +I+G G + A+K+ +E++ PD Y LI GLL R +A
Sbjct: 519 GFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREEDA 578
Query: 334 TQVFREMIKRGCEPTMHTY 352
V +++K GC P Y
Sbjct: 579 FTVLDQILKNGCTPITEVY 597
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 84/399 (21%), Positives = 144/399 (36%), Gaps = 94/399 (23%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N TF+ ++D + KS + EM +RR++ +K T+ I + L + ++ F
Sbjct: 195 NIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLF 254
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI------------------------- 166
M D GC N ++ C+ V EA L+
Sbjct: 255 IAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRA 314
Query: 167 ----------LKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVV 215
K++E IKP+ I Y ++KG G +A ++ N MT+ G P
Sbjct: 315 RRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCY 374
Query: 216 DKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS-TYRIVIDWMCKRGKISQAYTMLEEM 274
+ +I+ + + DEA + + + + D + TY I+I MC+ G + A + EM
Sbjct: 375 NALIKGYCDLGLLDEAKSLH--LEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEM 432
Query: 275 FKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE------------------------ 310
K G +T +++I G G + +A + ++E
Sbjct: 433 EKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTASL 492
Query: 311 ----------------------------KPDISLYHGLIKGLLRLRRAREATQVFREMIK 342
P+I Y+ LI G + A ++F+E+
Sbjct: 493 QTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQL 552
Query: 343 RGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGG 381
+G P TY L+ G L + D D I G
Sbjct: 553 KGLSPDSVTYGTLINGLLS--ANREEDAFTVLDQILKNG 589
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 106/238 (44%), Gaps = 40/238 (16%)
Query: 146 LNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
L +V+ LC L+++A ++++L++ PN I Y LI G+C G++ A K++ +
Sbjct: 492 LQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQ 551
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
+G P +I N++++A V + +K Y+ + W C+R KI
Sbjct: 552 LKGLSPDSVTYGTLINGLLSANREEDAFTVLDQI-LKNGCTPITEVYKSFMTWSCRRNKI 610
Query: 265 SQAYTM------------------LEEMFKRG---------IEAD------NLTLSSI-I 290
+ A+++ +EE F++G +E D L +I +
Sbjct: 611 TLAFSLWLKYLRSIPGRDSEVLKSVEENFEKGEVEEAVRGLLEMDFKLNDFQLAPYTIWL 670
Query: 291 YGLLARGRLREAYKVVEEIEKPDISLYH----GLIKGLLRLRRAREATQVFREMIKRG 344
GL GRL EA K+ +E+ ++ + LI LL++ A ++F I +G
Sbjct: 671 IGLCQAGRLEEALKIFFTLEEHNVLVTPPSCVKLIYRLLKVGNLDLAAEIFLYTIDKG 728
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 145/293 (49%), Gaps = 24/293 (8%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLSE--WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
N V+ C R V A ++ ++ E I PN+ YG +I G+C VG + EA K+++ M
Sbjct: 149 NTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEML 208
Query: 205 DEG-FEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGK 263
+G +P + + +I + K D A+ +++ V+R + ++TY +++ + G+
Sbjct: 209 TKGEVKPEAVMYNALIGGYCDQGKLDTAL-LYRDRMVERGVAMTVATYNLLVHALFMDGR 267
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHG 319
++AY ++EEM +G+ D T + +I G G +++A ++ E + + + Y
Sbjct: 268 GTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTA 327
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------------LG--KRGR 365
LI L + + +E ++F E ++RG P + Y L+ H +G ++ R
Sbjct: 328 LIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR 387
Query: 366 KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYS 418
PD V ++T+ GL G+ +A K ++ + RG++ YN + YS
Sbjct: 388 IAPDD-VTYNTLMR-GLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYS 438
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 132/304 (43%), Gaps = 60/304 (19%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
+KP + Y LI GYCD G L A + M + G ++ + ++ F + EA
Sbjct: 213 VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAY 272
Query: 233 KVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
++ V+ M GL+ TY I+I+ CK G + +A + E M +RG+ A +T ++
Sbjct: 273 EL-----VEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTA 327
Query: 289 IIYGLLARGRLRE-----------------------------------AYKVVEEIEK-- 311
+IY L +G+++E A++++ E+EK
Sbjct: 328 LIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR 387
Query: 312 --PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG----- 364
PD Y+ L++GL L R EA ++ EM +RG +P + TY L+ G+ K
Sbjct: 388 IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDAL 447
Query: 365 -------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
KG +P + + GL K G+ DA V+ ++ G+ Y +
Sbjct: 448 RIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 507
Query: 418 SNEE 421
+ E+
Sbjct: 508 TTED 511
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 106/224 (47%), Gaps = 9/224 (4%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDE 206
N +++ LC A L L + +PN + Y +I G+C G + A I M +
Sbjct: 118 NIMLRHLCSAGKPARALEL---LRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRER 174
Query: 207 -GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKIS 265
G P+ +I + K+ + DEA+KVF M K Y +I C +GK+
Sbjct: 175 GGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLD 234
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLI 321
A + M +RG+ T + +++ L GR EAY++VEE+ PD+ Y+ LI
Sbjct: 235 TALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILI 294
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
G + ++A ++F M +RG T+ TY L+ L K+G+
Sbjct: 295 NGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYA-LSKKGQ 337
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 117/233 (50%), Gaps = 7/233 (3%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLIEA 196
G ++ N +V L EA L+ ++ + + P+ Y LI G+C G++ +A
Sbjct: 247 GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKA 306
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVID 256
+I+ M+ G ++ +I K + E K+F V+R L Y +I+
Sbjct: 307 LEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEA-VRRGIRPDLVLYNALIN 365
Query: 257 WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KP 312
G I +A+ ++ EM K+ I D++T ++++ GL GR+ EA K+++E+ +P
Sbjct: 366 SHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQP 425
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
D+ Y+ LI G ++A ++ EM+ +G PT+ TY L+QG L K G+
Sbjct: 426 DLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQG-LCKNGQ 477
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 110/219 (50%), Gaps = 10/219 (4%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N ++ C+ V +A + +S ++ + Y LI G + E K+++
Sbjct: 291 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVR 350
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM--DDLGLSTYRIVIDWMCKRGK 263
G P + + + +I + D A ++ M KR+ DD+ TY ++ +C G+
Sbjct: 351 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV---TYNTLMRGLCLLGR 407
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHG 319
+ +A +++EM +RGI+ D +T +++I G +G +++A ++ E+ P + Y+
Sbjct: 408 VDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNA 467
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
LI+GL + + +A + +EM++ G P TYI L++G
Sbjct: 468 LIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEG 506
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 107/226 (47%), Gaps = 3/226 (1%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMV 128
A + T+N +++ K N+ E + M RR + T+ + L++ ++++
Sbjct: 283 LAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETD 342
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGY 187
F G L + N ++ + + A ++ ++ + I P+++ Y L++G
Sbjct: 343 KLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGL 402
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C +G + EA K+ + MT+ G +P + + +I + +A+++ M K +
Sbjct: 403 CLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPT- 461
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
L TY +I +CK G+ A M++EM + GI D+ T S+I GL
Sbjct: 462 LLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 507
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 80/187 (42%), Gaps = 18/187 (9%)
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKR-GIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY VI C RG++ A ++ EM +R GI + T ++I G GR+ EA KV +E
Sbjct: 147 TYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDE 206
Query: 309 I-----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG----- 358
+ KP+ +Y+ LI G + A M++RG T+ TY +L+
Sbjct: 207 MLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDG 266
Query: 359 -------HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
+ + G KG P V I + G K G A + E + RGV Y
Sbjct: 267 RGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYT 326
Query: 412 KFLHYYS 418
++ S
Sbjct: 327 ALIYALS 333
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 95/225 (42%), Gaps = 28/225 (12%)
Query: 241 KRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
RM L L + + + A+ + +MF+ + T + ++ L + G+
Sbjct: 72 SRMKSLSLPISTASLHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPA 131
Query: 301 EAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKR-GCEPTMHTYIMLLQG- 358
A +++ ++ +P+ Y+ +I G R + A + REM +R G P +TY ++ G
Sbjct: 132 RALELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGW 191
Query: 359 -HLGK-------------RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVE 404
+G+ +G P+ ++ +GG GK A Y +R++ RGV
Sbjct: 192 CKVGRVDEAVKVFDEMLTKGEVKPEAVMY--NALIGGYCDQGKLDTALLYRDRMVERGVA 249
Query: 405 VPRFDYNKFLHYY----SNEEGVVMFEEVGKKLREVGLADLADIF 445
+ YN +H E + EE+G K GLA D+F
Sbjct: 250 MTVATYNLLVHALFMDGRGTEAYELVEEMGGK----GLA--PDVF 288
>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/398 (22%), Positives = 175/398 (43%), Gaps = 62/398 (15%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHI 133
+T+N ++D K + + L EM RR ND T+ + + L++ E ++
Sbjct: 235 VTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGE 294
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYL----ILK--------------------- 168
M G + S N ++ + ++ EA L +LK
Sbjct: 295 MLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGR 354
Query: 169 -----------LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDK 217
L+ + P+ ++Y LI GYC +G+L++A +++ + P+I +
Sbjct: 355 MSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNT 414
Query: 218 MIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEE 273
+++ + + ++V Q ++V+ +++ G++ TY I+++ CK G +S A +E
Sbjct: 415 LLDGLCRQGE----LEVAQQLKVEMINE-GIAPDIVTYTILVNGSCKMGSLSMAQEFFDE 469
Query: 274 MFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRR 329
M G+E D+ ++ I G L G A+ + EE+ PD+ +Y+ ++ GL +L
Sbjct: 470 MLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGN 529
Query: 330 AREATQVFREMIKRGCEPTMHTYIMLLQGHLG----KRGR--------KGPDPLVNFDTI 377
EA+++ ++M+ G P TY ++ HL ++GR KG P V T+
Sbjct: 530 LEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTV 589
Query: 378 FVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
+ G G+ A Y + +G+ YN ++
Sbjct: 590 LIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLIN 627
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 111/251 (44%), Gaps = 41/251 (16%)
Query: 147 NKVVKTLC-QRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N ++ LC Q +L V + + ++E I P+ + Y L+ G C +G L A + ++ M
Sbjct: 413 NTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLH 472
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKIS 265
EG E I K+ A + + M K L Y +V+D +CK G +
Sbjct: 473 EGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPP-DLIIYNVVVDGLCKLGNLE 531
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI---------------- 309
+A +L++M G+ D +T +SII+ L GRLR+ ++ E+
Sbjct: 532 EASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLI 591
Query: 310 --------------------EK---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
EK P++ Y+ LI GL ++RR +A F EM+++G
Sbjct: 592 HGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIF 651
Query: 347 PTMHTYIMLLQ 357
P ++Y +L+
Sbjct: 652 PNKYSYTILIN 662
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 126/281 (44%), Gaps = 13/281 (4%)
Query: 124 LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGW 182
+ K V + M + G + ++ N ++ + C+ V + L+ ++ PN++ Y
Sbjct: 215 MSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNV 274
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
LI G G+ +A + M G + S + +I +F EA+ + + M +K
Sbjct: 275 LINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKG 334
Query: 243 MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
++TY I +CK G++S A L +M + D ++ +++IYG G L +A
Sbjct: 335 ASPT-VATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKA 393
Query: 303 YKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+ + +E+ P I Y+ L+ GL R A Q+ EMI G P + TY +L+ G
Sbjct: 394 FLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNG 453
Query: 359 HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVM 399
K G ++ F ++ G LD+ Y R++
Sbjct: 454 SC-KMGS------LSMAQEFFDEMLHEGLELDSYAYATRIV 487
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/362 (20%), Positives = 164/362 (45%), Gaps = 44/362 (12%)
Query: 16 YQQQYSPESRLHSSLSSCNFNLTHEF---------FLQICNNFPLSWRPVYLFFQYTQKA 66
+Q S R S S + L+H+F F+++ ++F S R F++ + +
Sbjct: 49 FQDVISKSIREKPSNFSNYYWLSHQFGPVIVDPDLFVRVLSSFRTSPRMALRLFRWAE-S 107
Query: 67 QPCFAHNSITFNRMVDIIGKSRNI-DLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELK 125
QP F + F +++I+ ++ + +W R++N +I + +
Sbjct: 108 QPGFRRSEFVFCAILEILAQNNLMRSAYWVM------ERVINANMHRIVDVLIG------ 155
Query: 126 KMVNFFHIMNDCGC---EYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYG 181
GC E S+++L+ ++ ++ +V + + K+ + P+
Sbjct: 156 ------------GCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCN 203
Query: 182 WLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK 241
+++ D + +A +++ M + G +P+I + +++++ K K + + + M+ +
Sbjct: 204 RILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQ-R 262
Query: 242 RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
R TY ++I+ + K+G+ QA ++ EM K G++ T + +IYG +G L E
Sbjct: 263 RGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAE 322
Query: 302 AYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
A + EE+ P ++ Y+ I GL +L R +A Q +M+ P + +Y L+
Sbjct: 323 ALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIY 382
Query: 358 GH 359
G+
Sbjct: 383 GY 384
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 67/165 (40%), Gaps = 27/165 (16%)
Query: 260 KRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDIS 315
K+ + Q ++ ++M K + D + I+ L + + +A +V + KP I
Sbjct: 176 KKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIV 235
Query: 316 LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFD 375
Y+ L+ + + ++ + EM +RGC P TY
Sbjct: 236 TYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTY----------------------- 272
Query: 376 TIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE 420
+ + GL K G+ A + ++ G++V + YN ++ Y N+
Sbjct: 273 NVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNK 317
Score = 38.1 bits (87), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 59/121 (48%), Gaps = 4/121 (3%)
Query: 91 DLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVV 150
++F+E L + +V T+ + + A L++ +F M + G ++ N ++
Sbjct: 570 EIFYEMLSKGLTPSVV---TYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLI 626
Query: 151 KTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFE 209
LC+ + + +A ++ E I PN+ +Y LI C++G+ EA ++ M D G +
Sbjct: 627 NGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQ 686
Query: 210 P 210
P
Sbjct: 687 P 687
>gi|125528152|gb|EAY76266.1| hypothetical protein OsI_04202 [Oryza sativa Indica Group]
Length = 528
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 99/461 (21%), Positives = 185/461 (40%), Gaps = 36/461 (7%)
Query: 2 PVDPGHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQ 61
P D V + ++ +R L C + + + S + F+
Sbjct: 74 PPDVARDVEAVVGAAEGFHADAARARGLLERCGATASEPVVVAVLARLRNSCAAAHAAFR 133
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEV 121
+ AQP +A ++ M+ I+ K R D L +M R L + + +
Sbjct: 134 WAS-AQPGYAPGRHAYHSMLAILAKHRRFDDARALLDQMRRSSLASPAAVMLLIRRYCAA 192
Query: 122 RELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYG 181
R++ V F + G + + ++ LC+ K V +A++L+L + ++
Sbjct: 193 RDVAGAVAAFRALPSLGFRPGVAEFHGLLTALCRYKNVQDAEHLLLSSEKEFPFETKSFN 252
Query: 182 WLIKGYCD-VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
++ G+C+ V + EA + WN M +G + + MI F K D MK+F
Sbjct: 253 VVLNGWCNMVRSVREAKRFWNAMEIKGIKRDVVSYGSMISCFSKAGSLDTVMKLFN---- 308
Query: 241 KRMDDLGL----STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR 296
RM + G+ Y V+ + K +++A ++ M ++G+ D T +S+I L
Sbjct: 309 -RMKEAGVVPDRKIYNAVVYALAKGRCVNEAKALVRSMEEKGVAPDTATFNSLIRPLCKA 367
Query: 297 GRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVF---REMIKRGCEPTM 349
+++EA K+++++ P + +H L L AR +VF +M + C+P M
Sbjct: 368 RQVQEARKMLDDMLGRGLSPSVRTFHAL------LDVARSPIEVFDLLDKMKELQCDPEM 421
Query: 350 HTYIMLLQGHLGKRGR------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVER 397
T+IML++ R G P + + + GL G+ ++AKY E
Sbjct: 422 DTFIMLIRKFCRWRQHDSVEKLWSAMPANGLSPDRSAYIVLIHGLFLNGRLEESAKYYEE 481
Query: 398 VMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
+ +G + + S E VG + V L
Sbjct: 482 MKAKGFPPEKKTEEMIQAWLSGRELAKASASVGSRGGSVSL 522
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 166/379 (43%), Gaps = 57/379 (15%)
Query: 73 NSITFNRMVDIIGKSRNID---LFWETLQEMGR-RRLVNDKTFKIALMTLAEVRELKKMV 128
N+ T+N ++ + +I+ + +E + +MG +V T +T V +++
Sbjct: 449 NTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLL 508
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGY 187
+ +M + GCE N++V + + A + ++ E + PN ++Y LI G+
Sbjct: 509 D---LMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGH 565
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
G + A + M + G P+++ + +I K N+ EA K+ +M + G
Sbjct: 566 SKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKI-----CDKMAEQG 620
Query: 248 L----STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
L TY +ID +C+ G+ A+ + +M KR + T SS+IYGL G+ EA
Sbjct: 621 LLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAE 680
Query: 304 KVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG- 358
+++E+E+ PD + LI G + L R A + R M+ GC+P TY +LL+G
Sbjct: 681 ILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGL 740
Query: 359 --------------H---------------------LGKRGRKGPDPLVNFDTIFVGGLV 383
H L + G +P ++ + V GL
Sbjct: 741 QKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLC 800
Query: 384 KAGKSLDAAKYVERVMNRG 402
+ G+ +A + V+ + RG
Sbjct: 801 RKGRFYEAEQLVKDMKERG 819
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 149/346 (43%), Gaps = 19/346 (5%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIM 134
T+ ++ ++RN+DL + M + N T+ + L + + ++ M
Sbjct: 277 TYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEM 336
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDL 193
+ G E ++ + LC + EA L+ ++ + +PN Y LI G +G L
Sbjct: 337 IEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKL 396
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
A +++ M EG P+ + +I + A+K+F M TY
Sbjct: 397 EVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWME-GHGSLANTQTYNE 455
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK-- 311
+I +C G I +A + E+M K G +T +++I G L +G + A ++++ +++
Sbjct: 456 IIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENG 515
Query: 312 --PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH---------- 359
PD Y+ L+ G + + A+ F+EM++ G P +Y L+ GH
Sbjct: 516 CEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIAL 575
Query: 360 --LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
L + G +P V + GL K + +A K +++ +G+
Sbjct: 576 SLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGL 621
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 164/379 (43%), Gaps = 34/379 (8%)
Query: 104 RLVNDKTFK----IALMTLAEVR---ELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQR 156
RLV D+ F I ++ + R E++++ +F + ++ G +SL N ++ L +
Sbjct: 159 RLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKF 218
Query: 157 KLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVV 215
++V A+ L + L+ I+P+ + + LI G + EA I + + P +
Sbjct: 219 EMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTY 278
Query: 216 DKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMF 275
+I + D A VF M VK D TY +I+ +C G++ +A MLEEM
Sbjct: 279 TSLILGHCRNRNLDLAFGVFDRM-VKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMI 337
Query: 276 KRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAR 331
++GIE T + I L A EA ++V ++K P++ Y LI GL RL +
Sbjct: 338 EKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLE 397
Query: 332 EATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR-----------KGPDPLVNFDTI--F 378
A ++ +M+K G P TY L+ L GR +G L N T
Sbjct: 398 VAIGLYHKMLKEGLVPNTVTYNALIN-ELCVGGRFSTALKIFHWMEGHGSLANTQTYNEI 456
Query: 379 VGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVV-------MFEEVGK 431
+ GL G A E+++ G YN ++ Y + V + +E G
Sbjct: 457 IKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGC 516
Query: 432 KLREVGLADLADIFQRYGK 450
+ E +L F ++GK
Sbjct: 517 EPDEWTYNELVSGFSKWGK 535
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 117/267 (43%), Gaps = 31/267 (11%)
Query: 97 LQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQ 155
L+EM R+ L D+ TF + + + M D GC+ + + ++K L +
Sbjct: 683 LKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQK 742
Query: 156 RKLVVEAKY------------------------LILKLSE-WIKPNEIAYGWLIKGYCDV 190
L++E K L+ ++SE +P Y L+ G C
Sbjct: 743 ECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRK 802
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G EA ++ M + GF P ++ ++ K + D A+K+F + K L LS
Sbjct: 803 GRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQ-LHLSI 861
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
YR +I +CK G++ +A + + M ++ AD + + ++ GLL G L K++ +E
Sbjct: 862 YRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIME 921
Query: 311 K----PDISLYHGLIKGLLRLRRAREA 333
P+I Y L + L R+ ++ E+
Sbjct: 922 SKNFTPNIQTYVILGRELSRIGKSIES 948
>gi|414872432|tpg|DAA50989.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 604
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 143/311 (45%), Gaps = 15/311 (4%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL--VNDKTFKIALM 116
FF++ K + + H++ T+ ++ + W+ +QEM R + V +
Sbjct: 76 FFRWAAKRRN-YEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSDVVR 134
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE--WIK 174
L + +++ + F+ + C+ + N ++ L + L ++S
Sbjct: 135 MLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCF 194
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+ + Y LI +C +G A ++ N M + G +P+ + +I FFK N A+ +
Sbjct: 195 PDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSL 254
Query: 235 FQMMRVK--RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
F+ MR + R D + TY +I + K G+I +AY EM + G D + ++++I
Sbjct: 255 FEEMRHQYCRPD---VFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINF 311
Query: 293 LLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLR-RAREATQVFREMIKRGCEP 347
L GRL +A K+ +E+E P + Y+ +IK L + RA E F M + G P
Sbjct: 312 LGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISP 371
Query: 348 TMHTYIMLLQG 358
+ TY +L+ G
Sbjct: 372 SSFTYSILIDG 382
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 146/361 (40%), Gaps = 61/361 (16%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVNFFHIM 134
T+ ++ +GK+ ID + EM R D F ++ L + L + F M
Sbjct: 269 TYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEM 328
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKL-VVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
C S+ N ++K L + K E ++ E I P+ Y LI G+C
Sbjct: 329 ETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNR 388
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST-- 250
+ +A + M ++GF P +I+ K + D A ++FQ ++ ++ G S+
Sbjct: 389 MEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELK----ENCGSSSAR 444
Query: 251 -YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
Y ++I + K G++ A M +EM K G
Sbjct: 445 VYAVMIKHLGKAGRLDDAINMFDEMNKLGC------------------------------ 474
Query: 310 EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPD 369
PD+ Y+ L+ GL R EA R M + GC P +++Y ++L G L K G GP
Sbjct: 475 -APDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNG-LAKTG--GPH 530
Query: 370 ----------------PLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
+V+++T+ +G L AG +A+K ++ + G E Y+
Sbjct: 531 RAMEMLSNMKQSTVRPDVVSYNTV-LGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSI 589
Query: 414 L 414
L
Sbjct: 590 L 590
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 37/198 (18%), Positives = 74/198 (37%), Gaps = 41/198 (20%)
Query: 68 PCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRR-RLVNDKTFKIALMTLAEVRELKK 126
PC A + ++D +GK++ DL E QE+ + + + + + L + L
Sbjct: 406 PCPA----AYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDD 461
Query: 127 MVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-------------- 172
+N F MN GC + N ++ L + ++ EA + ++ E
Sbjct: 462 AINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILN 521
Query: 173 ----------------------IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEP 210
++P+ ++Y ++ G EASK+ M GFE
Sbjct: 522 GLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEY 581
Query: 211 SIDVVDKMIETFFKINKD 228
+ ++E K++ +
Sbjct: 582 DLITYSSILEAIGKVDHE 599
>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 142/297 (47%), Gaps = 15/297 (5%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALM-TLAEVRELKKMVNFF 131
+++T+N ++ + S L++M +R++ + F AL+ T + L + N +
Sbjct: 218 DAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLY 277
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDV 190
M ++ N ++ C + +AKY+ L +S+ P+ + Y LI G+C
Sbjct: 278 KEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKS 337
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS- 249
+ + K++ MT +G + +I + + K + A KVF RM D G+S
Sbjct: 338 KRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFN-----RMVDCGVSP 392
Query: 250 ---TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
TY I++D +C GKI +A M+E++ K ++ D +T + II GL +L+EA+ +
Sbjct: 393 DIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLF 452
Query: 307 EEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
+ KPD Y +I GL R REA ++ R M + G P+ Y L+ H
Sbjct: 453 RSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDH 509
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 146/308 (47%), Gaps = 7/308 (2%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMV 128
F N + +N +++ + K+R+++ E M ++ + D T+ + L+
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 239
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGY 187
M + ++ ++ T + ++EA+ L ++ + PN Y LI G+
Sbjct: 240 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 299
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C G L +A +++LM +G P + + +I F K + ++ MK+F M + +
Sbjct: 300 CIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDA 359
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
TY +I C+ GK++ A + M G+ D +T + ++ L G++ +A +VE
Sbjct: 360 F-TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 418
Query: 308 EIEKP----DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
+++K DI Y+ +I+GL R + +EA +FR + ++G +P YI ++ G K
Sbjct: 419 DLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 478
Query: 364 GRKGPDPL 371
++ D L
Sbjct: 479 LQREADKL 486
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 167/379 (44%), Gaps = 31/379 (8%)
Query: 92 LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVK 151
LF E LQ +V+ F L +A++ + ++ +H M + G + L ++
Sbjct: 66 LFCEMLQSRPIPSIVD---FTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIH 122
Query: 152 TLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEP 210
C+ + A L+ K+ + +P+ + G L+ G+C EA + + M GF P
Sbjct: 123 CFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVP 182
Query: 211 SIDVVDKMIETFFKINKDDEAMKVFQMMRVK--RMDDLGLSTYRIVIDWMCKRGKISQAY 268
++ + + +I K + A++VF M K R D + TY +I + G+ + A
Sbjct: 183 NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAV---TYNTLISGLSNSGRWTDAA 239
Query: 269 TMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGL 324
+L +M KR I+ + + +++I + G L EA + +E+ + P++ Y+ LI G
Sbjct: 240 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 299
Query: 325 LRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL-GKRGRKGPDPLV----------- 372
+A +F M+ +GC P + TY L+ G KR G
Sbjct: 300 CIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDA 359
Query: 373 -NFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN----EEGVVMFE 427
++T+ + G +AGK A K R+++ GV YN L N E+ +VM E
Sbjct: 360 FTYNTL-IHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 418
Query: 428 EVGKKLREVGLADLADIFQ 446
++ K +V + I Q
Sbjct: 419 DLQKSEMDVDIITYNIIIQ 437
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 82/195 (42%), Gaps = 38/195 (19%)
Query: 66 AQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVREL 124
++ CF + +T+N ++ KS+ ++ + EM + LV D T+ + + +L
Sbjct: 317 SKGCFP-DVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKL 375
Query: 125 KKMVNFFHIMNDCGC--------------------EYSLEML---------------NKV 149
F+ M DCG E +L M+ N +
Sbjct: 376 NVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNII 435
Query: 150 VKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGF 208
++ LC+ + EA L L+ + +KP+ IAY +I G C G EA K+ M ++GF
Sbjct: 436 IQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGF 495
Query: 209 EPSIDVVDKMIETFF 223
PS + D+ + +
Sbjct: 496 MPSERIYDETLRDHY 510
>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
Length = 1202
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 155/337 (45%), Gaps = 44/337 (13%)
Query: 63 TQKAQPCFAHNSITFNRMVDIIGKSRNIDL---FWETLQEMGRRRLVNDKTFKIALMTLA 119
T+ F ++ TF+ + D + D +ET + G + +N T I L L
Sbjct: 681 TEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLK--MNAYTCSILLNALC 738
Query: 120 EVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEI 178
+ +++K G + + N ++ ++ +V A+ I + + +KP+ +
Sbjct: 739 KEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHL 798
Query: 179 AYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETF------------FKIN 226
AY LI+ +C++GD+ A + N M +G PS++ + +I + K
Sbjct: 799 AYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEM 858
Query: 227 KDDEAM-----------------KVFQMMRVKR-MDDLGLST----YRIVIDWMCKRGKI 264
+D+ M K+ + VKR M+D G+S Y ++ID C +GKI
Sbjct: 859 EDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKI 918
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGL 320
A+ EEMFK+GIE + +T +++I GL G+L EA ++ EI KPD+ Y+ L
Sbjct: 919 EDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSL 978
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
I G + ++ EM G +PT+ TY +L+
Sbjct: 979 ISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLIS 1015
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 153/358 (42%), Gaps = 48/358 (13%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
ITFN ++ + K+ ++ L EM + V D TF I + + + +
Sbjct: 658 ITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYET 717
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGD 192
D G + + + ++ LC+ + +A+ ++ + +++ + PNE+ Y +I GY GD
Sbjct: 718 AVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGD 777
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
L+ A + M +G +P + +I TF ++ + A + M++K + + TY
Sbjct: 778 LVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSP-SVETYN 836
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP 312
I+I ++ + + + +L+EM DN T+ P
Sbjct: 837 ILIGGYGRKYEFDKCFDLLKEM------EDNGTM-------------------------P 865
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG-------- 364
++ Y LI L + + EA V R+M RG P + Y ML+ G K
Sbjct: 866 NVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFS 925
Query: 365 ----RKGPD-PLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
+KG + LV ++T+ + GL GK +A + + +G++ F YN + Y
Sbjct: 926 EEMFKKGIELNLVTYNTL-IDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGY 982
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/333 (20%), Positives = 146/333 (43%), Gaps = 24/333 (7%)
Query: 105 LVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLE----MLNKVVKTLCQRKLVV 160
L +D ++ + + L E + + + + F + + G S + +L+ +VKT ++ V
Sbjct: 479 LKHDFSYLLLSVLLNESKMISEAADLFFALRNEGIFPSSDSLTLLLDHLVKT---KQFRV 535
Query: 161 EAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIE 220
+ L +P++ YG I+ + D+ + +++N M + P++ + + +I+
Sbjct: 536 TINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLID 595
Query: 221 TFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIE 280
K+ + +A ++F M +R+ L TY +ID CK G +++ + E M IE
Sbjct: 596 GLCKVRQMKDAEQLFDEMLARRLLP-SLITYNTLIDGYCKDGNPEKSFKVRERMKADNIE 654
Query: 281 ADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQV 336
+T ++++ GL G + +A V+ E++ PD + L G +A A V
Sbjct: 655 PSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGV 714
Query: 337 FREMIKRGCEPTMHTYIMLL-----QGH-------LGKRGRKGPDPLVNFDTIFVGGLVK 384
+ + G + +T +LL +G LG+ KG P + G +
Sbjct: 715 YETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSR 774
Query: 385 AGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
G + A ++ + +G++ YN + +
Sbjct: 775 KGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTF 807
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 101/212 (47%), Gaps = 10/212 (4%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLIEA 196
G E +L N ++ L + EA+ ++L++S + +KP+ Y LI GY G++
Sbjct: 932 GIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRC 991
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVID 256
++ M G +P++ +I K + K+F M ++ L Y V+
Sbjct: 992 IALYEEMKTSGIKPTLKTYHLLISLCTK-EGIELTKKIFGEMSLQP----DLLVYNGVLH 1046
Query: 257 WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KP 312
G + +A+ + ++M ++ I D T +S+I G L G+L E +++E++ +P
Sbjct: 1047 CYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEP 1106
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+ Y ++KG ++ A +REM ++G
Sbjct: 1107 EADTYDIIVKGHCEMKDYMGAYVWYREMQEKG 1138
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 130/290 (44%), Gaps = 11/290 (3%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIM 134
T+N ++ G+ D ++ L+EM + N ++ + L + +L + M
Sbjct: 834 TYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDM 893
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDVGDL 193
D G ++ + N ++ C + + +A ++ + I+ N + Y LI G G L
Sbjct: 894 EDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKL 953
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
EA + ++ +G +P + + +I + + +++ M+ + L TY +
Sbjct: 954 AEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPT-LKTYHL 1012
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE-IEKP 312
+I +C + I + EM ++ D L + +++ G + +A+ + ++ IEK
Sbjct: 1013 LIS-LCTKEGIELTKKIFGEM---SLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKS 1068
Query: 313 ---DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
D + Y+ LI G L++ + E + EM R EP TY ++++GH
Sbjct: 1069 IGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGH 1118
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 77/161 (47%), Gaps = 21/161 (13%)
Query: 274 MFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREA 333
M+ + I+A + LS + GL R++ + P + +Y+ LI GL ++R+ ++A
Sbjct: 554 MYGKAIQA-AVKLSDVGKGLELFNRMKH------DRISPTVFIYNVLIDGLCKVRQMKDA 606
Query: 334 TQVFREMIKRGCEPTMHTYIMLLQGHLGK---------RGRKGPD----PLVNFDTIFVG 380
Q+F EM+ R P++ TY L+ G+ R R D L+ F+T+ +
Sbjct: 607 EQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTL-LK 665
Query: 381 GLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEE 421
GL KAG DA + + ++G F ++ YS+ +
Sbjct: 666 GLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSND 706
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 106/238 (44%), Gaps = 5/238 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N +T+N ++D + + + + L E+ R+ L D T+ + +++ + +
Sbjct: 936 NLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALY 995
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVG 191
M G + +L+ + ++ +LC ++ + K + ++S ++P+ + Y ++ Y G
Sbjct: 996 EEMKTSGIKPTLKTYHLLI-SLCTKEGIELTKKIFGEMS--LQPDLLVYNGVLHCYAVHG 1052
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTY 251
D+ +A + M ++ + +I K+ K E + M+ + M+ TY
Sbjct: 1053 DMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEA-DTY 1111
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
I++ C+ AY EM ++G+ D ++ GL R +EA V+ E+
Sbjct: 1112 DIIVKGHCEMKDYMGAYVWYREMQEKGLLLDVCIGDELVSGLKEEWRSKEAENVISEM 1169
>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 167/352 (47%), Gaps = 25/352 (7%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEM---GRRRLVNDKTFKIALMTLAEVRELKKMVN 129
N+ +N ++D + +N E L+EM G V T+ I + L+ ++ K+ +
Sbjct: 167 NACCYNPLLDTYTRQKNDARVAEVLKEMESGGVEPTVG--TYTILVDGLSTAGDISKVES 224
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYC 188
F + + + V+ C+ V A + + + I+PNE YG LI G+C
Sbjct: 225 VFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFC 284
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD-DLG 247
+G + A + M G + + + MI+ + + D+A+++ +M +RM L
Sbjct: 285 KIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVM--ERMGIQLD 342
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
+ TY + +C+ ++ A +L M + G+E++ ++ +++I G + EA ++
Sbjct: 343 VYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTLISIHSKEGDMVEARRLFR 402
Query: 308 EIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL--G 361
++E +P + Y+ +I G ++ REA + +EM K+G P ++TY L+ GH G
Sbjct: 403 DMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNG 462
Query: 362 K----------RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
K ++G P V T + GL K G+S +A ++ + ++ G+
Sbjct: 463 KVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQFYDNMLAAGL 514
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 139/296 (46%), Gaps = 12/296 (4%)
Query: 77 FNRMVDIIGKSRNIDLFWETLQE-MGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMN 135
++ +++ ++ N+ E E +G N++T+ + ++ +++ M
Sbjct: 241 YSAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQ 300
Query: 136 DCGCEYSLEMLNKVVKTLCQRKLV---VEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGD 192
G ++ + N ++ C+ +V +E K ++ ++ I+ + Y L G C V
Sbjct: 301 LRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVMERMG--IQLDVYTYNTLACGLCRVNR 358
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ +A K+ ++MT+ G E + +I K EA ++F+ M K + TY
Sbjct: 359 MEDAKKLLHIMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKG-SRPSVVTYN 417
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
++ID K G I +A +EM K+G+ D T +++++G G++ A ++ EE++
Sbjct: 418 VMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQR 477
Query: 311 --KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG-HLGKR 363
KP++ Y LI GL + R+ EA Q + M+ G P Y ML+ H KR
Sbjct: 478 GAKPNVVAYTALISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSMLVGSLHTDKR 533
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 114/267 (42%), Gaps = 40/267 (14%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNF 130
HN I FN M+D + +D K +
Sbjct: 305 GHNQIIFNTMIDGYCRHGMVD----------------------------------KALEI 330
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCD 189
+M G + + N + LC+ + +AK L+ ++E ++ N ++Y LI +
Sbjct: 331 KAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTLISIHSK 390
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
GD++EA +++ M +G PS+ + MI+ + K EA + + M K + +
Sbjct: 391 EGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVP-DVY 449
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
TY ++ C GK+ A + EEM +RG + + + +++I GL GR EA++ + +
Sbjct: 450 TYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQFYDNM 509
Query: 310 EK----PDISLYHGLIKGLLRLRRARE 332
PD +LY L+ L +R E
Sbjct: 510 LAAGLTPDDTLYSMLVGSLHTDKRKDE 536
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 5/145 (3%)
Query: 218 MIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKR 277
+++ F K + D+A ++ M + L Y ++D ++ ++ +L+EM
Sbjct: 139 VVDGFCKAGRMDDARRLLDEMP-RHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEMESG 197
Query: 278 GIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP----DISLYHGLIKGLLRLRRAREA 333
G+E T + ++ GL G + + V +EI++ D+ Y +I R R A
Sbjct: 198 GVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRA 257
Query: 334 TQVFREMIKRGCEPTMHTYIMLLQG 358
++VF E + G EP TY L+ G
Sbjct: 258 SEVFDECVGNGIEPNERTYGALING 282
>gi|255660824|gb|ACU25581.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 418
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 140/303 (46%), Gaps = 52/303 (17%)
Query: 104 RLVNDKTFKIALMT-------LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQR 156
RL + F++ T L +++ K + F+ +CG SL N ++ C+
Sbjct: 90 RLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHXFCKE 149
Query: 157 KLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVV 215
+ A+ + +++W ++P+ +++ L+ GY +GDL E ++ ++M G P +
Sbjct: 150 GEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVHPDVYTY 209
Query: 216 DKMIETFFKINKDDEAMKVF------------------------------------QMMR 239
+I K +K D+A ++F QM+
Sbjct: 210 SVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLIDGHCKNGRVDLAMEIYRQMLS 269
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
+ D L TY +I +CK+G + QA+ +++EM +G++ D +T +++I G G L
Sbjct: 270 QSLLPD--LITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGXCKEGDL 327
Query: 300 REAYK-----VVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIM 354
A++ + E I D++ Y LI GL + R+ +A ++ REM+ G +P + TY M
Sbjct: 328 ETAFEYRKRMIKENIRXDDVA-YTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTM 386
Query: 355 LLQ 357
++
Sbjct: 387 IIN 389
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 38/208 (18%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
N +TF ++D K+ +DL E ++M + L+ D
Sbjct: 240 NXVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPD------------------------ 275
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVG 191
L N ++ LC++ + +A LI ++S + +KP++I Y LI G C G
Sbjct: 276 ----------LITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGXCKEG 325
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLST 250
DL A + M E +I + + +A K+ +M+ V ++G T
Sbjct: 326 DLETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG--T 383
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRG 278
Y ++I+ CK+G + +L+EM + G
Sbjct: 384 YTMIINEXCKKGDVWTGSKLLKEMQRXG 411
>gi|410109931|gb|AFV61045.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
macrophylla]
Length = 431
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 156/333 (46%), Gaps = 29/333 (8%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T + L L +++ K + F+ + +CG SL N ++ C+ + A+ + +
Sbjct: 109 TCRKVLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAI 168
Query: 170 SEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++W ++P+ ++Y L+ GY +GDL E ++ + M G +P + +I K +K
Sbjct: 169 TKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKM 228
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
D+A ++F M VK + G+ + +ID CK G++ A + ++M + + D +T ++
Sbjct: 229 DDANELFDEMLVKGLVPNGV-IFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNT 287
Query: 289 IIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+IYGL +G L++ + +++E+ KPD Y LI G + A + ++MI+
Sbjct: 288 LIYGLCKKGDLKQVHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKQMIQEN 347
Query: 345 CEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVE 404
Y T + GL + G+S+DA K + ++N G++
Sbjct: 348 IRLDEVAY-----------------------TALISGLCQEGRSVDAEKMLREMLNVGLK 384
Query: 405 VPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVG 437
Y ++ + + V ++ K+++ G
Sbjct: 385 PDARTYTMIINEFCKKGDVWKGSKLLKEMQRDG 417
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 102/256 (39%), Gaps = 75/256 (29%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
N + F ++D K+ +DL E ++M + L+ D
Sbjct: 246 NGVIFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPD------------------------ 281
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVG 191
L N ++ LC++ + + +LI ++S + +KP++I Y LI G C G
Sbjct: 282 ----------LITYNTLIYGLCKKGDLKQVHHLIDEMSMKGLKPDKITYTTLIDGCCKEG 331
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTY 251
DL D FE ++ + I R+D++ Y
Sbjct: 332 DL-----------DTAFEHRKQMIQENI----------------------RLDEVA---Y 355
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK 311
+I +C+ G+ A ML EM G++ D T + II +G + + K+++E+++
Sbjct: 356 TALISGLCQEGRSVDAEKMLREMLNVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQR 415
Query: 312 ----PDISLYHGLIKG 323
P + Y+ L+ G
Sbjct: 416 DGHVPSVVTYNVLMNG 431
>gi|357139229|ref|XP_003571186.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Brachypodium distachyon]
Length = 628
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 141/311 (45%), Gaps = 15/311 (4%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL--VNDKTFKIALM 116
FF++ K + + H++ T+ ++ + W+ +QEM R + V +
Sbjct: 105 FFRWAAKKRN-YEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSDIIR 163
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE--WIK 174
L + + K V F+ + C+ + + N ++ L + L ++S
Sbjct: 164 MLGNAKMISKAVAIFYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEGHCF 223
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+ + Y LI +C +G A ++ N M D G +P+ + +I FFK+N A+ +
Sbjct: 224 PDTVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGL 283
Query: 235 FQMMRVK--RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
F+ MR + R D + TY +I + K G+ +AY EM + G D + ++++I
Sbjct: 284 FEEMRHQYCRPD---VFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINF 340
Query: 293 LLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLR-RAREATQVFREMIKRGCEP 347
L GRL +A K+ EE+ P + Y+ +IK L + R E + F M G P
Sbjct: 341 LGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGISP 400
Query: 348 TMHTYIMLLQG 358
+ TY +L+ G
Sbjct: 401 SPFTYSILIDG 411
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 145/367 (39%), Gaps = 73/367 (19%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT--LAEVRELKKMVNFFHI 133
T+ ++ +GK+ D + EM RR T I M L + L V F
Sbjct: 298 TYTELIRGLGKAGRFDEAYNFFHEM-RREGCRPDTVVINNMINFLGKAGRLDDAVKLFEE 356
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW--------IKPNEIAYGWLIK 185
M C S+ N ++K L E+K I ++S W I P+ Y LI
Sbjct: 357 MGTLQCIPSVVTYNTIIKAL------FESKSRISEISSWFERMKGSGISPSPFTYSILID 410
Query: 186 GYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD 245
G+C +A + M ++GF P +I+ K + D A ++FQ ++ ++
Sbjct: 411 GFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELK----EN 466
Query: 246 LGLST---YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
G S+ Y ++I + K G++ A + +EM K G
Sbjct: 467 CGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGC----------------------- 503
Query: 303 YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
P++ Y+ L+ GL R EA R M + GC P +++Y ++L G L K
Sbjct: 504 --------TPNVYAYNALMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNIILNG-LAK 554
Query: 363 RGRK---------------GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPR 407
G PD V+++T+ +G + AG +AAK ++ + G E
Sbjct: 555 TGGPHRAMEMLSNMKQSAIKPDA-VSYNTV-LGAMSHAGLFEEAAKLMKEMNVLGFEYDL 612
Query: 408 FDYNKFL 414
Y+ L
Sbjct: 613 ITYSSIL 619
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 85/227 (37%), Gaps = 40/227 (17%)
Query: 68 PCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRR-RLVNDKTFKIALMTLAEVRELKK 126
PC A + ++D +GK++ D+ E QE+ + + + + + L + L
Sbjct: 435 PCPA----AYCSLIDALGKAKRYDIAHELFQELKENCGSSSARVYAVMIKHLGKAGRLDD 490
Query: 127 MVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKG 186
VN F MN GC PN AY L+ G
Sbjct: 491 AVNLFDEMNKLGC----------------------------------TPNVYAYNALMSG 516
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
G L EA M + G P I+ + ++ K AM++ M+ +
Sbjct: 517 LARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPD 576
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
+S Y V+ M G +A +++EM G E D +T SSI+ +
Sbjct: 577 AVS-YNTVLGAMSHAGLFEEAAKLMKEMNVLGFEYDLITYSSILEAI 622
>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
Length = 684
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 162/362 (44%), Gaps = 25/362 (6%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIM 134
+T+ ++ + ++R D E +GR VN + +L + + +M
Sbjct: 286 VTYGFLLRGLCRTRQAD---EAYAMLGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMM 342
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDL 193
GC + N ++ LC+ A ++ ++ E PN + Y L+ +C G
Sbjct: 343 GSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMW 402
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
+A + + M+ +GF + + +I K K DEAM++ Q M+ + + TY
Sbjct: 403 DDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKP-DICTYNT 461
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE--- 310
+I +C ++ +A + + + G+ A+ +T +++I+ LL GR +E ++ E+
Sbjct: 462 IIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHG 521
Query: 311 -KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR---- 365
D+ Y+GLIK L + + + EM+ +G +P +Y ML+ L K G+
Sbjct: 522 CPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLIN-ELCKAGKVRDA 580
Query: 366 ---------KGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
+G P +V ++T+ + GL K G + A +E++ N V YN +
Sbjct: 581 LELSKEMLNQGLTPDIVTYNTL-INGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILIS 639
Query: 416 YY 417
++
Sbjct: 640 WH 641
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 170/407 (41%), Gaps = 59/407 (14%)
Query: 84 IGKSRNIDLFWETLQEMGRRRLVND----KTFKIALMTLAEVRELKKMVNFFHIMNDCGC 139
+G++R+ L+ M R V D +T AL+ V E +++ +M GC
Sbjct: 193 LGRARDA---LALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLM---GC 246
Query: 140 EYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDV-------- 190
+ N VV LC V EA L+ ++ P+ + YG+L++G C
Sbjct: 247 AADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYA 306
Query: 191 -----------------------GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINK 227
G L A++++ +M +G P + + ++ K+ +
Sbjct: 307 MLGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGR 366
Query: 228 DDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLS 287
A+++ M K + TY ++ C+ G A ML++M +G ++ +
Sbjct: 367 CGSAVRMLDEMEEKGCAP-NIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYN 425
Query: 288 SIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
IIY L G+L EA ++V+E++ KPDI Y+ +I L + EA +F +++
Sbjct: 426 GIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEE 485
Query: 344 GCEPTMHTYIMLLQG--HLGK--RGRKGPDPLV----NFDTIFVGGLVKA----GKSLDA 391
G TY L+ H G+ G + + +V D + GL+KA G +
Sbjct: 486 GVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRS 545
Query: 392 AKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
+E +M +G++ F YN ++ V E+ K++ GL
Sbjct: 546 MMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGL 592
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 124/299 (41%), Gaps = 40/299 (13%)
Query: 64 QKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRE 123
Q + F+ NS +N ++ +GK +D +QEM +
Sbjct: 411 QMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQ-------------------- 450
Query: 124 LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGW 182
GC+ + N ++ LC + EA+++ L E + N I Y
Sbjct: 451 --------------GCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNT 496
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
LI G E ++ N M G + + +I+ K D +M + + M K
Sbjct: 497 LIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKG 556
Query: 243 MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
+ S Y ++I+ +CK GK+ A + +EM +G+ D +T +++I GL G A
Sbjct: 557 IKPNNFS-YNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAA 615
Query: 303 YKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
++E++ PDI Y+ LI ++R +A+ + + + G P T+ M++Q
Sbjct: 616 LNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTWGMMVQ 674
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 114/242 (47%), Gaps = 8/242 (3%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N ++ L + + EA L+ ++ S+ KP+ Y +I C+ + EA I+ + +
Sbjct: 425 NGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLE 484
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKIS 265
EG + + +I + E +++ M V L + +Y +I +CK G +
Sbjct: 485 EGVVANGITYNTLIHALLHSGRWQEGLRLANEM-VLHGCPLDVVSYNGLIKALCKEGNVD 543
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLI 321
++ +LEEM +GI+ +N + + +I L G++R+A ++ +E+ PDI Y+ LI
Sbjct: 544 RSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLI 603
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGG 381
GL ++ A + ++ P + TY +L+ H + R D + D GG
Sbjct: 604 NGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHC--KVRLLDDASMLLDKAVSGG 661
Query: 382 LV 383
+V
Sbjct: 662 IV 663
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 15/228 (6%)
Query: 147 NKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N V+ TL + +A L + L + + P +G + C +G +A + M
Sbjct: 149 NAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRARDALALLRGMAR 208
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
G P + +I EA + +M+ + D+ +T+ V+ +C G +
Sbjct: 209 HGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADV--NTFNDVVLGLCGLGHV 266
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR-----EAYKVVEEIEKPDISLYHG 319
+A +++ M G T S + YG L RG R EAY ++ + + ++ + +
Sbjct: 267 REAARLVDRMMMHGC-----TPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEVNVVMLNT 321
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKG 367
+I+G L + AT+++ M +GC P +HTY +L+ G L K GR G
Sbjct: 322 VIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHG-LCKLGRCG 368
>gi|449530582|ref|XP_004172273.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 165/369 (44%), Gaps = 22/369 (5%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNF 130
+ +S +FN +D++ KS N+D W E R + +F I + E + K
Sbjct: 70 SPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGRTQFDVYSFWITIKAFCENGNVSKGFEL 129
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCD 189
M G ++ + +++ C+ + +AK + ++ + + N+ Y +I G+
Sbjct: 130 LAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFK 189
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
G + +++ M G P++ + +I + + K A KVF + KR
Sbjct: 190 KGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEIS-KRGVACNAV 248
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
TY I+I +C++G++S+A +LE M + I T + ++ GL G+L +A +E++
Sbjct: 249 TYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKL 308
Query: 310 EK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG------- 358
+ P + Y+ LI G ++ + +++ REM RG P+ TY +L+
Sbjct: 309 KLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDI 368
Query: 359 -------HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
HL KR PD + + + GL G ++A+K + ++ ++ YN
Sbjct: 369 EKAYEMFHLMKRIGLVPDQ--HTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYN 426
Query: 412 KFLHYYSNE 420
++ Y E
Sbjct: 427 TMINGYCKE 435
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 122/269 (45%), Gaps = 37/269 (13%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N ++ LC++ V +A+ L+ ++ I P + L+ G C+ G L +A +
Sbjct: 251 NILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKL 310
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKR 261
G P++ + +I F K+ ++ V+ M+D G+S TY I+++ +
Sbjct: 311 IGLCPTLVTYNILISGFSKVGNSSVVSEL-----VREMEDRGISPSKVTYTILMNTFVRS 365
Query: 262 GKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV----VEEIEKPDISLY 317
I +AY M M + G+ D T +I+GL +G + EA K+ VE +P+ +Y
Sbjct: 366 DDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIY 425
Query: 318 HGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTI 377
+ +I G + + +A + EM+K G P + +YI +Q
Sbjct: 426 NTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQ-------------------- 465
Query: 378 FVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
L K GKS++A + ++ + G++ P
Sbjct: 466 ---ILCKDGKSIEAKRLLKEMTEAGLKPP 491
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 117/267 (43%), Gaps = 37/267 (13%)
Query: 182 WL-IKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
W+ IK +C+ G++ + ++ M G P++ + +IE + D+A +F
Sbjct: 111 WITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFS---- 166
Query: 241 KRMDDLGLST----YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR 296
RMDDLGL+ Y I+I+ K+G + + ++M G+ + T +S+I
Sbjct: 167 -RMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRD 225
Query: 297 GRLREAYKVVEEIEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
G+L A+KV +EI K ++ Y+ LI GL R + +A + M + PT T+
Sbjct: 226 GKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTF 285
Query: 353 IMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNK 412
ML+ G L G+ A Y+E++ G+ YN
Sbjct: 286 NMLMDG-----------------------LCNTGQLDKALSYLEKLKLIGLCPTLVTYNI 322
Query: 413 FLHYYSNEEGVVMFEEVGKKLREVGLA 439
+ +S + E+ +++ + G++
Sbjct: 323 LISGFSKVGNSSVVSELVREMEDRGIS 349
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 91/207 (43%), Gaps = 36/207 (17%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+T+N ++ K N + E ++EM R + K T+ I + T +++K FH+
Sbjct: 318 VTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHL 377
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDL 193
M G + P++ YG LI G C G++
Sbjct: 378 MKRIG----------------------------------LVPDQHTYGVLIHGLCIKGNM 403
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
+EASK++ M + +P+ + + MI + K +A+K + M VK +++Y
Sbjct: 404 VEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEM-VKNGVTPNVASYIS 462
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIE 280
I +CK GK +A +L+EM + G++
Sbjct: 463 TIQILCKDGKSIEAKRLLKEMTEAGLK 489
>gi|449455956|ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
gi|449492939|ref|XP_004159147.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
Length = 535
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 112/452 (24%), Positives = 193/452 (42%), Gaps = 97/452 (21%)
Query: 60 FQYTQKAQPCFAHNSITFNRMVDIIGKSRNI-------------------DLFWETLQEM 100
F Y K P F HN T++ ++ + ++R DLF ++
Sbjct: 72 FHYAGKYHPAFTHNYDTYHAIIYRLSRARAFEPVESLLLELQDSGINCSEDLFITVIRSY 131
Query: 101 G--RRRLVNDKTFKIALMTLA---EVRELKKMVN--------------FFHIMNDCGCEY 141
G R + KTF + + T VR L ++N F + + G
Sbjct: 132 GLASRPKMALKTF-LRIQTFGVRRSVRSLNTLLNALVQNNRFSSVHLLFKYSKSKFGVVP 190
Query: 142 SLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIW 200
++ N ++K LC++ V A+ + ++ S I PN + Y ++ GY GD+I A +++
Sbjct: 191 NVFTCNILIKALCKKNDVEGARKVFDEMPSMGIVPNVVTYTTILGGYVSRGDMIGAKRVF 250
Query: 201 NLMTDEGFEP--------------------SIDVVDKMIET---------------FFKI 225
+ D G+ P ++ V+D+M E + K
Sbjct: 251 GELFDHGWLPDATTYTILMDGYVKQGRFTDAVKVMDEMEENGVEPNDITYGVIILGYCKE 310
Query: 226 NKDDEAMKVFQ-MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNL 284
K EA+ + M+ K + + L VID +C G++ +A M E++ K+ DN
Sbjct: 311 RKSGEALNLLNDMLEKKYIPNSALCCK--VIDVLCGEGRVKEACKMWEKLLKKNCTPDNA 368
Query: 285 TLSSIIYGLLARGRLREAYKVVEEIEKPDIS---LYHGLIKGLLRLRRAREATQVFREMI 341
S++I+ L G + EA K+ E E+ IS Y+ LI G+ + EA +++ +M+
Sbjct: 369 ITSTLIHWLCKEGNIWEARKLFNEFERGTISSLLTYNTLIAGMCEMGELCEAARLWDDML 428
Query: 342 KRGCEPTMHTYIMLLQGHLGKRGRK-----------GPDPLVNFDT--IFVGGLVKAGKS 388
++GC P TY ML++G L K G+ L+N T I V GL+K GK
Sbjct: 429 EKGCVPNEFTYNMLIKGFL-KVGKAKEVIKVVEEMLDKGCLLNESTYLILVEGLLKLGKR 487
Query: 389 LDAAKYVERVMNRGVEVPRFDYNKFL-HYYSN 419
+ + +++ G V +N F+ H+ SN
Sbjct: 488 EELLNILSMIISSGA-VDFKAWNLFVPHFVSN 518
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 93/440 (21%), Positives = 181/440 (41%), Gaps = 71/440 (16%)
Query: 78 NRMVDIIGKSRNIDLFWETLQEMGRRRLV---NDKTFKIALMTLAEVRELKKMVNFFHIM 134
NR+V +I + +N+DL + G+ N T+ + L+ R + + + +
Sbjct: 53 NRLVAMIRRQQNLDLALQIFHYAGKYHPAFTHNYDTYHAIIYRLSRARAFEPVESLLLEL 112
Query: 135 NDCGCEYSLEM-----------------------------------LNKVVKTLCQRKLV 159
D G S ++ LN ++ L Q
Sbjct: 113 QDSGINCSEDLFITVIRSYGLASRPKMALKTFLRIQTFGVRRSVRSLNTLLNALVQNNR- 171
Query: 160 VEAKYLILKLSE---WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVD 216
+ +L+ K S+ + PN LIK C D+ A K+++ M G P++
Sbjct: 172 FSSVHLLFKYSKSKFGVVPNVFTCNILIKALCKKNDVEGARKVFDEMPSMGIVPNVVTYT 231
Query: 217 KMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMF 275
++ + A +VF ++ + D +TY I++D K+G+ + A +++EM
Sbjct: 232 TILGGYVSRGDMIGAKRVFGELFDHGWLPD--ATTYTILMDGYVKQGRFTDAVKVMDEME 289
Query: 276 KRGIEADNLTLSSIIYGLLARGRLREAYKVVEE-IEK---PDISLYHGLIKGLLRLRRAR 331
+ G+E +++T II G + EA ++ + +EK P+ +L +I L R +
Sbjct: 290 ENGVEPNDITYGVIILGYCKERKSGEALNLLNDMLEKKYIPNSALCCKVIDVLCGEGRVK 349
Query: 332 EATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG-------------RKGPDPLVNFDTIF 378
EA +++ +++K+ C P L+ L K G R L+ ++T+
Sbjct: 350 EACKMWEKLLKKNCTPDNAITSTLIH-WLCKEGNIWEARKLFNEFERGTISSLLTYNTL- 407
Query: 379 VGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN----KFLHYYSNEEGVVMFEEV---GK 431
+ G+ + G+ +AA+ + ++ +G F YN FL +E + + EE+ G
Sbjct: 408 IAGMCEMGELCEAARLWDDMLEKGCVPNEFTYNMLIKGFLKVGKAKEVIKVVEEMLDKGC 467
Query: 432 KLREVGLADLADIFQRYGKK 451
L E L + + GK+
Sbjct: 468 LLNESTYLILVEGLLKLGKR 487
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 132/292 (45%), Gaps = 20/292 (6%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEA 196
GC+ L VV LC+R A L+ K+ + ++P + Y +I G C + +A
Sbjct: 830 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 889
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVID 256
++ M +G P++ +I + +A ++ M ++R + + T+ +ID
Sbjct: 890 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM-IERKINPDVFTFSALID 948
Query: 257 WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----P 312
K GK+ +A + +EM KR I+ +T SS+I G RL EA ++ E + P
Sbjct: 949 AFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP 1008
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG-------- 364
D+ Y+ LIKG + +R E +VFREM +RG TY +L+QG L + G
Sbjct: 1009 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG-LFQAGDCDMAQEI 1067
Query: 365 -----RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
G P + + GL K GK A E + +E + YN
Sbjct: 1068 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 1119
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 168/384 (43%), Gaps = 21/384 (5%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+T+ +V+ + K + DL + L +M + +L + + L + + + +N F
Sbjct: 836 VTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKE 895
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGD 192
M G ++ + ++ LC +A L+ + E I P+ + LI + G
Sbjct: 896 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 955
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
L+EA K+++ M +PSI +I F ++ DEA ++F+ M V + + TY
Sbjct: 956 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM-VSKHCFPDVVTYN 1014
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK- 311
+I CK ++ + + EM +RG+ + +T + +I GL G A ++ +E+
Sbjct: 1015 TLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD 1074
Query: 312 ---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR--- 365
P+I Y+ L+ GL + + +A VF + + EPT++TY ++++G + K G+
Sbjct: 1075 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEG-MCKAGKVED 1133
Query: 366 ----------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
KG P V + G + G +A + + G YN +
Sbjct: 1134 GWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIR 1193
Query: 416 YYSNEEGVVMFEEVGKKLREVGLA 439
+ E+ K++R G A
Sbjct: 1194 ARLRDGDREASAELIKEMRSCGFA 1217
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 135/290 (46%), Gaps = 7/290 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHI 133
+ FNR++ I K + D+ ++M + ND TF I + ++ ++
Sbjct: 189 VDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGK 248
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M G E + +V C+R V +A L+ K+ E KP+ +AY +I C
Sbjct: 249 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKR 308
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ +A + + +G P++ ++ ++ +A ++ M +K+ + TY
Sbjct: 309 VNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDM-IKKKITPNVITYS 367
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK- 311
++D K GK+ +A + EEM + I+ D +T SS+I GL R+ EA ++ + +
Sbjct: 368 ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 427
Query: 312 ---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
D+ Y+ LI G + +R + ++FREM +RG TY L+QG
Sbjct: 428 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQG 477
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 155/344 (45%), Gaps = 24/344 (6%)
Query: 111 FKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS 170
F L +A++ + +++ M + G ++ + ++ C+R + A ++ K+
Sbjct: 698 FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMM 757
Query: 171 EW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD 229
+ +PN + L+ GYC + EA + + M G++P+ + +I F NK
Sbjct: 758 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS 817
Query: 230 EAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSI 289
EAM + M K L TY +V++ +CKRG A+ +L +M + +E L ++I
Sbjct: 818 EAMALIDRMVAKGCQP-DLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTI 876
Query: 290 IYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGC 345
I GL + +A + +E+E +P++ Y LI L R +A+++ +MI+R
Sbjct: 877 IDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 936
Query: 346 EPTMHTYIMLLQGHLGKRG-------------RKGPDPLVNFDTIFVGGLVKAGKSLDAA 392
P + T+ L+ + K G ++ DP + + + G + +A
Sbjct: 937 NPDVFTFSALIDAFV-KEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 995
Query: 393 KYVERVMNRGVEVPRFDYNK----FLHYYSNEEGVVMFEEVGKK 432
+ E ++++ YN F Y EEG+ +F E+ ++
Sbjct: 996 QMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR 1039
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 144/312 (46%), Gaps = 21/312 (6%)
Query: 45 ICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRR 104
+CN+ S L +K P N IT++ ++D K+ + E +EM R
Sbjct: 338 LCNSSRWSDAARLLSDMIKKKITP----NVITYSALLDAFVKNGKVLEAKELFEEMVRMS 393
Query: 105 LVND-KTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAK 163
+ D T+ + L + + F +M GC + N ++ C+ K V +
Sbjct: 394 IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGM 453
Query: 164 YLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETF 222
L ++S+ + N + Y LI+G+ GD+ +A + ++ M G P I + ++
Sbjct: 454 KLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGL 513
Query: 223 FKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEAD 282
+ ++A+ +F+ M+ + MD L + TY VI MCK GK+ +A+++ + +G++ D
Sbjct: 514 CDNGELEKALVIFEDMQKREMD-LDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPD 572
Query: 283 NLTLSSIIYGLLARGRLREAYKVV-----EEIEKPDISLYHGLIKGLLRLRRAREATQVF 337
+T ++++ GL +G L E + E + K D +L G I + ++
Sbjct: 573 IVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDIT---------LSAELI 623
Query: 338 REMIKRGCEPTM 349
++M+ G P++
Sbjct: 624 KKMLSCGYAPSL 635
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 89/163 (54%), Gaps = 14/163 (8%)
Query: 210 PSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKIS 265
PSI K++ K+NK D + + + M+ +LG+ TY I+I+ C+R ++
Sbjct: 693 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQ-----NLGIPHNHYTYSILINCFCRRSQLP 747
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLI 321
A +L +M K G E + +TLSS++ G R+ EA +V+++ +P+ ++ LI
Sbjct: 748 LALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLI 807
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
GL +A EA + M+ +GC+P + TY +++ G L KRG
Sbjct: 808 HGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNG-LCKRG 849
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 107/228 (46%), Gaps = 32/228 (14%)
Query: 210 PSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYT 269
PSI ++++ K+ K D + + + M V + + L T+ IVI+ C ++S A +
Sbjct: 186 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRN-DLYTFNIVINCFCCCFQVSLALS 244
Query: 270 MLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLL 325
+L +M K G E D +T+ S++ G R R+ +A +V+++ KPDI Y+ +I L
Sbjct: 245 ILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLC 304
Query: 326 RLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKA 385
+ +R +A F+E+ ++G P + TY T V GL +
Sbjct: 305 KTKRVNDAFDFFKEIERKGIRPNVVTY-----------------------TALVNGLCNS 341
Query: 386 GKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVV----MFEEV 429
+ DAA+ + ++ + + Y+ L + V+ +FEE+
Sbjct: 342 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM 389
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 101/205 (49%), Gaps = 6/205 (2%)
Query: 159 VVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDK 217
V+EAK L ++ I P+ + Y LI G C + EA+++++LM +G + +
Sbjct: 379 VLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNT 438
Query: 218 MIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKR 277
+I F K + ++ MK+F+ M + + TY +I + G + +A +M
Sbjct: 439 LINGFCKAKRVEDGMKLFREMSQRGLVS-NTVTYNTLIQGFFQAGDVDKAQEFFSQMDFF 497
Query: 278 GIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP----DISLYHGLIKGLLRLRRAREA 333
GI D T + ++ GL G L +A + E+++K DI Y +I+G+ + + EA
Sbjct: 498 GISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEA 557
Query: 334 TQVFREMIKRGCEPTMHTYIMLLQG 358
+F + +G +P + TY ++ G
Sbjct: 558 WSLFCSLSLKGLKPDIVTYTTMMSG 582
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 86/180 (47%), Gaps = 2/180 (1%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAE 120
+ + +Q N++T+N ++ + ++ + D+ E +EM + N T+ L L +
Sbjct: 1033 FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 1092
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIA 179
+L+K + F + E ++ N +++ +C+ V + L LS + +KP+ +A
Sbjct: 1093 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVA 1152
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
Y +I G+C G EA ++ M ++G P+ + +I + + + ++ + MR
Sbjct: 1153 YNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 1212
>gi|410109895|gb|AFV61027.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
urticoides]
Length = 412
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 137/288 (47%), Gaps = 41/288 (14%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T + L L +++ K + F+ + +CG SL N ++ C+ + A+ + +
Sbjct: 90 TCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAI 149
Query: 170 SEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++W ++P+ ++Y L+ GY +GDL E ++ + M G +P + +I K +K
Sbjct: 150 TKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKM 209
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
D A +F M VK + G+ T+ +ID CK G++ A + ++M + + D +T ++
Sbjct: 210 DGANGLFDEMLVKGLVPNGV-TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNT 268
Query: 289 IIYGLLARGRLREAYKVVEEIE----KPD------------------------------- 313
+IYGL +G L++A+ +++E+ KPD
Sbjct: 269 LIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQEN 328
Query: 314 ISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
I L Y LI GL + R+ +A ++ REM+ G +P TY M++
Sbjct: 329 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVN 376
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 93/222 (41%), Gaps = 38/222 (17%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
N +TF ++D K+ +DL E ++M + L+ D
Sbjct: 227 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPD------------------------ 262
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVG 191
L N ++ LC++ + +A LI ++S + +KP++ Y LI G C G
Sbjct: 263 ----------LITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEG 312
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLST 250
DL A + M E +I + + +A K+ +M+ V D G T
Sbjct: 313 DLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTG--T 370
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
Y ++++ CK+G + + +L+EM + G +T + ++ G
Sbjct: 371 YTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 412
>gi|218184813|gb|EEC67240.1| hypothetical protein OsI_34171 [Oryza sativa Indica Group]
Length = 458
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 139/299 (46%), Gaps = 33/299 (11%)
Query: 149 VVKTLCQRKLVVEAKYLILK-LSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDE 206
++K LC K +A ++L+ ++E P+ + L+KG CD EA ++ ++M D+
Sbjct: 136 LLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADD 195
Query: 207 ---GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGK 263
G P + +I FFK D+A + M +R+ + TY +I +CK
Sbjct: 196 RGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLGRRISP-NVVTYSSIIAALCKAQA 254
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHG 319
+ +A +L M K G+ D +T SSI++G + G+ +E + ++ +P++ Y
Sbjct: 255 MDKAMEVLNTMVKNGVMPDCMTYSSILHGYCSSGQPKEDIGTLNKMRSDGVEPNVVTYRS 314
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFV 379
L+ L + R +A ++F M KRG EP + TY LLQG+ K
Sbjct: 315 LMNYLCKNGRCTKARKIFDSMTKRGLEPDIATYRTLLQGYATK----------------- 357
Query: 380 GGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
G LV+ LD ++ G++ +N + Y+ +E V V K+R+ GL
Sbjct: 358 GALVEMHALLDL------MVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGL 410
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 109/225 (48%), Gaps = 4/225 (1%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMV 128
+ N +T++ ++ + K++ +D E L M + ++ D T+ L + K+ +
Sbjct: 235 ISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYSSILHGYCSSGQPKEDI 294
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGY 187
+ M G E ++ ++ LC+ +A+ + +++ ++P+ Y L++GY
Sbjct: 295 GTLNKMRSDGVEPNVVTYRSLMNYLCKNGRCTKARKIFDSMTKRGLEPDIATYRTLLQGY 354
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
G L+E + +LM G +P V + +I + K K D+AM VF MR ++
Sbjct: 355 ATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNP-N 413
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEAD-NLTLSSIIY 291
+ Y VID +CK G + A E+M G+ + L++SS+++
Sbjct: 414 VVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIILSVSSVLF 458
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 88/188 (46%), Gaps = 5/188 (2%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
L I PN + Y +I C + +A ++ N M G P ++ + +
Sbjct: 231 LGRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYSSILHGYCSSGQP 290
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
E + MR ++ + TYR +++++CK G+ ++A + + M KRG+E D T +
Sbjct: 291 KEDIGTLNKMRSDGVEP-NVVTYRSLMNYLCKNGRCTKARKIFDSMTKRGLEPDIATYRT 349
Query: 289 IIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
++ G +G L E + +++ + + PD +++ LI + + +A VF +M + G
Sbjct: 350 LLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHG 409
Query: 345 CEPTMHTY 352
P + Y
Sbjct: 410 LNPNVVCY 417
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 118/280 (42%), Gaps = 40/280 (14%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALMTLAEVRELKKMVNFFHI 133
+++ +++ K + D + T EM GRR N T+ + L + + + K
Sbjct: 205 VSYTTVINGFFKEGDSDKAYSTYHEMLGRRISPNVVTYSSIIAALCKAQAMDK------- 257
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDL 193
++E+LN +VK + P+ + Y ++ GYC G
Sbjct: 258 --------AMEVLNTMVK-------------------NGVMPDCMTYSSILHGYCSSGQP 290
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
E N M +G EP++ ++ K + +A K+F M KR + ++TYR
Sbjct: 291 KEDIGTLNKMRSDGVEPNVVTYRSLMNYLCKNGRCTKARKIFDSM-TKRGLEPDIATYRT 349
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK-- 311
++ +G + + + +L+ M + GI+ D+ + +I + ++ +A V ++ +
Sbjct: 350 LLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHG 409
Query: 312 --PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
P++ Y +I L + +A F +MI G P +
Sbjct: 410 LNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNI 449
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 94/225 (41%), Gaps = 26/225 (11%)
Query: 221 TFFKINKDDEAMKVFQMMRVKRM--DDL--GLSTYRIVIDWMCKRGKISQAYTMLEEMFK 276
T + +D A V R+ R D++ L TY I+I C+ G++ + L + K
Sbjct: 64 TLTDVARDSPAAAVSLFNRMARAGADEVTPDLCTYSILIGCCCRAGRLDLGFAALGNVIK 123
Query: 277 RGIEADNLTLSSIIYGLLARGRLREAYKVV-----EEIEKPDISLYHGLIKGLLRLRRAR 331
+G + +T + ++ GL A R +A +V E PD+ L+KGL R++
Sbjct: 124 KGFRVEAITFAPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQ 183
Query: 332 EATQVFREMIKR---GCEPTMHTYIMLLQGHLGKR-------------GRKGPDPLVNFD 375
EA ++ M G P + +Y ++ G + GR+ +V +
Sbjct: 184 EALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLGRRISPNVVTYS 243
Query: 376 TIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE 420
+I + L KA A + + ++ GV Y+ LH Y +
Sbjct: 244 SI-IAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYSSILHGYCSS 287
>gi|125579821|gb|EAZ20967.1| hypothetical protein OsJ_36620 [Oryza sativa Japonica Group]
Length = 408
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 120/263 (45%), Gaps = 6/263 (2%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
N + + + L R + + M GC+ + N ++ LC V +A++ +
Sbjct: 9 NVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFL 68
Query: 167 LK-LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI 225
+ + + PN+++Y LI G+C G+L+ AS + M G P + +I
Sbjct: 69 REAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVA 128
Query: 226 NKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
K EA+ V + M +R ++ Y ++I +CK+ + A +LEEM ++ ++ D
Sbjct: 129 GKVSEALIVREKM-TERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFV 187
Query: 286 LSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMI 341
+++I G + L +A K+ E +E PDI + +IKG + EA M
Sbjct: 188 YATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMR 247
Query: 342 KRGCEPTMHTYIMLLQGHLGKRG 364
K GC P TY ++ G+ + G
Sbjct: 248 KVGCIPDEFTYTTVISGYAKQEG 270
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 114/267 (42%), Gaps = 21/267 (7%)
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
PN Y +I C+ +A I M G +P I + +I + + K
Sbjct: 7 SPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLIT---GLCHEGHVRK 63
Query: 234 VFQMMR--VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
+R ++R + +Y +I C RG++ A +L EM RG D +T ++I+
Sbjct: 64 AEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIH 123
Query: 292 GLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
GL+ G++ EA V E++ + PD+++Y+ LI GL + R A + EM+++ +P
Sbjct: 124 GLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQP 183
Query: 348 TMHTYIMLLQG-----HLGKRGR-------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYV 395
Y L+ G +LG + KG P + + G + G +A +
Sbjct: 184 DEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCM 243
Query: 396 ERVMNRGVEVPRFDYNKFLHYYSNEEG 422
+ G F Y + Y+ +EG
Sbjct: 244 SNMRKVGCIPDEFTYTTVISGYAKQEG 270
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 87/200 (43%), Gaps = 18/200 (9%)
Query: 241 KRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
KR + Y VID +C +QA +L++MF G + D +T +++I GL G +R
Sbjct: 3 KRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVR 62
Query: 301 EAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
+A + E + P+ Y LI G A+ + EM+ RG P + T+ L+
Sbjct: 63 KAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALI 122
Query: 357 QGHL------------GKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYV-ERVMNRGV 403
G + K + P VN + + GL K + L AAK + E ++ + V
Sbjct: 123 HGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKK-RMLPAAKNILEEMLEKNV 181
Query: 404 EVPRFDYNKFLHYYSNEEGV 423
+ F Y + + E +
Sbjct: 182 QPDEFVYATLIDGFIRSENL 201
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 170/389 (43%), Gaps = 29/389 (7%)
Query: 72 HNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNF 130
HN T++ +++ + + L L +M + D T L + + + V
Sbjct: 114 HNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVAL 173
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCD 189
M + G + N ++ L EA LI ++ + +P+ YG ++ G C
Sbjct: 174 VDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCK 233
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
GD+ A + M E ++ + + +I+ K D+A +F M K + +
Sbjct: 234 RGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP-DVF 292
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
TY +I +C G+ S A +L +M +R I + +T +S+I G+L EA K+ +E+
Sbjct: 293 TYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 352
Query: 310 EK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG------- 358
+ P+I Y+ LI G R EA Q+F M+ + C P + TY L++G
Sbjct: 353 IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRV 412
Query: 359 --------HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY 410
+ +RG G V ++T+ + GL +AG A K +++++ GV Y
Sbjct: 413 EEGMELFREMSQRGLVGNT--VTYNTL-IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITY 469
Query: 411 NKFLH----YYSNEEGVVMFEEVGKKLRE 435
+ L Y E+ +V+FE + K E
Sbjct: 470 SILLDGLCKYGKLEKALVVFEYLQKSKME 498
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 130/279 (46%), Gaps = 9/279 (3%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
N +TFN ++D K + + EM +R + N T+ + L + F
Sbjct: 325 NVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF 384
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
+M C + N ++K C+ K V E L ++S+ + N + Y LI+G
Sbjct: 385 TLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQA 444
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
GD A KI+ M +G P I +++ K K ++A+ VF+ ++ +M+ + T
Sbjct: 445 GDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP-NIYT 503
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y I+I+ MCK GK+ + + + +G++ + + +++I G +G EA + E++
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 563
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGC 345
+ PD Y+ LI+ LR + ++ +EM R C
Sbjct: 564 EDGTLPDSGCYNTLIRARLRDGDKAASAELIKEM--RSC 600
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 135/288 (46%), Gaps = 39/288 (13%)
Query: 210 PSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKIS 265
PSI K++ K+NK D + + + +M +LG+ TY I+++ C+R ++
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGE-----QMQNLGIPHNHYTYSILLNCFCRRSQLP 133
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLI 321
A +L +M K G E D +TLSS++ G R+ EA +V+++ KPD ++ LI
Sbjct: 134 LALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLI 193
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG------------RKGP- 368
GL +A EA + M+ RGC+P + TY ++ G L KRG KG
Sbjct: 194 HGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNG-LCKRGDIDLALSLLKKMEKGKI 252
Query: 369 -DPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN-----EEG 422
+V ++TI + GL K DA ++ +G++ F YN + N +
Sbjct: 253 EANVVIYNTI-IDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDAS 311
Query: 423 VVMFEEVGKKLRE--VGLADLADIFQRYGKKMATR---ERRRNRAIEP 465
++ + + +K+ V L D F + GK + + R+I+P
Sbjct: 312 RLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 359
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 141/305 (46%), Gaps = 7/305 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N + +N ++D + K +++D ++ +M + + D T+ + L
Sbjct: 255 NVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLL 314
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
M + ++ N ++ + ++EA+ L ++ + I PN + Y LI G+C
Sbjct: 315 SDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMH 374
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
L EA +I+ LM + P + + +I+ F K + +E M++F+ M + + T
Sbjct: 375 DRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG-NTVT 433
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y +I + + G A + ++M G+ D +T S ++ GL G+L +A V E ++
Sbjct: 434 YNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ 493
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK 366
K P+I Y+ +I+G+ + + + +F + +G +P + Y ++ G K ++
Sbjct: 494 KSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKE 553
Query: 367 GPDPL 371
D L
Sbjct: 554 EADAL 558
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 118/284 (41%), Gaps = 63/284 (22%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEP--------------------SI 212
I N Y L+ +C L A + M G+EP ++
Sbjct: 112 IPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAV 171
Query: 213 DVVDKMIETFFKI---------------NKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDW 257
+VD+M+E +K NK EA+ + M V R L TY V++
Sbjct: 172 ALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRM-VARGCQPDLFTYGTVVNG 230
Query: 258 MCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPD 313
+CKRG I A ++L++M K IEA+ + ++II GL + +A+ + ++E KPD
Sbjct: 231 LCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPD 290
Query: 314 ISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVN 373
+ Y+ LI L R +A+++ +MI+R P + T+ L+
Sbjct: 291 VFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLID---------------- 334
Query: 374 FDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
K GK ++A K + ++ R ++ YN ++ +
Sbjct: 335 -------AFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGF 371
>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 634
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 162/367 (44%), Gaps = 42/367 (11%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMV 128
F +S T+++++ + + ++ ++ QEM R + D T+ L +V +++
Sbjct: 118 FIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQAR 177
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKT-LCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGY 187
N+F M GC ++ ++ L RKL + + LS PN + Y LI G+
Sbjct: 178 NWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGH 237
Query: 188 CDVGDLIEASKIWNLMTDEGF-----------------EPSIDVVDKMIETFFKINKDDE 230
C G+ +A +I+ M ++ EP++ +++ K +K E
Sbjct: 238 CKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKE 297
Query: 231 AMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
A + + M ++ + + Y +ID CK GK+ +A + +M G + T SS+I
Sbjct: 298 ARDLLETMSLEGCEPNQI-IYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLI 356
Query: 291 YGLLARGRLREAYKVV----EEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
L RL A KV+ E P++ +Y ++ GL ++ + EA ++ M ++GC
Sbjct: 357 DKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCY 416
Query: 347 PTMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDT--IFVGGLVKAGKSLDA 391
P + TY ++ G GK GR KG P NF T + + AG DA
Sbjct: 417 PNVVTYTAMIDG-FGKAGRVDRCLELLQLMTSKGCAP--NFITYRVLINHCCAAGLLDDA 473
Query: 392 AKYVERV 398
K +E +
Sbjct: 474 HKLLEEM 480
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 120/284 (42%), Gaps = 37/284 (13%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIE- 195
GC S + N +V C+ A L+ K+ +P + Y LI G C DL
Sbjct: 6 GCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSM 65
Query: 196 -----ASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLS 249
A + +N M + G + V I K ++A V +MM + D S
Sbjct: 66 EVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDS--S 123
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
TY VI ++C K+ +A+ + +EM + GI D T ++++ G + +A +E+
Sbjct: 124 TYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEM 183
Query: 310 EK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
++ P++ Y LI L+ R+ A ++F M+ GC P + TY L+ GH
Sbjct: 184 QQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGH------ 237
Query: 366 KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFD 409
KAG++ A + R+ N V++P D
Sbjct: 238 -----------------CKAGETEKACQIYARMKNDKVDIPDVD 264
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 115/256 (44%), Gaps = 42/256 (16%)
Query: 149 VVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEG 207
+V LC+ V EA+ L+ +S E +PN+I Y LI G+C VG L EA +++ M G
Sbjct: 285 LVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHG 344
Query: 208 FEPSIDVVDKMIETFFKINKDDEAMKVFQMM--------------------RVKRMDDL- 246
P++ +I+ FK + D A+KV M +V + D+
Sbjct: 345 CSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAY 404
Query: 247 -------------GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
+ TY +ID K G++ + +L+ M +G + +T +I
Sbjct: 405 RLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHC 464
Query: 294 LARGRLREAYKVVEEIEKP----DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
A G L +A+K++EE+++ I +Y +I+G A + + E+ + G P +
Sbjct: 465 CAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSHEFVA--SLGLLAELSEDGSVPIL 522
Query: 350 HTYIMLLQGHLGKRGR 365
Y +L+ + K GR
Sbjct: 523 PVYKLLIDNFI-KAGR 537
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 125/302 (41%), Gaps = 39/302 (12%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALMTLAEVRELKKMVNFF 131
N I ++ ++D K +D E +M G N T+ + L + + L +
Sbjct: 313 NQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVL 372
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
M + C ++ + ++V LC+ EA L+L + E PN + Y +I G+
Sbjct: 373 TKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKA 432
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR----------- 239
G + ++ LMT +G P+ +I D+A K+ + M+
Sbjct: 433 GRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMY 492
Query: 240 -----------------VKRMDDLG----LSTYRIVIDWMCKRGKISQAYTMLEEMFKRG 278
+ + + G L Y+++ID K G++ A + EE+
Sbjct: 493 RKVIEGFSHEFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFS 552
Query: 279 IEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREAT 334
N T S+I L ++ +A+K+ ++ + P++S+ LIKGLLR+ + EA
Sbjct: 553 AAYQN-TYVSLIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEAL 611
Query: 335 QV 336
Q+
Sbjct: 612 QL 613
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/246 (19%), Positives = 108/246 (43%), Gaps = 6/246 (2%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVN 129
A N + + MVD + K D + + M + N T+ + + + + +
Sbjct: 381 APNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLE 440
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIA-YGWLIKGYC 188
+M GC + ++ C L+ +A L+ ++ + P I Y +I+G+
Sbjct: 441 LLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFS 500
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
+ + + + ++++G P + V +I+ F K + + A+++ + +
Sbjct: 501 H--EFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHE--ELSSFSAAYQ 556
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
+TY +I+ + K+ +A+ + +M +RG + L +I GLL G+ EA ++ +
Sbjct: 557 NTYVSLIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQLSDS 616
Query: 309 IEKPDI 314
I + DI
Sbjct: 617 ICQMDI 622
>gi|449491568|ref|XP_004158939.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 412
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 155/311 (49%), Gaps = 25/311 (8%)
Query: 149 VVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEG 207
++ LC+ EAK + ++ ++ + PN I+Y L+ G+C G L E+ +++N M D+G
Sbjct: 68 IIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQG 127
Query: 208 FEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQA 267
+P++ + +I+ K K EA K+ + + ++R L L TY +ID CK G +S A
Sbjct: 128 VQPNLVQFNVLIDILCKEGKVIEAKKLLE-VTIQRGIILDLVTYNSLIDGFCKIGDLSSA 186
Query: 268 YTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKG 323
+ M +G E + ++ + +I G ++ EA + E+ ++P++ Y L+ G
Sbjct: 187 RKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTG 246
Query: 324 LLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG-----------RKGPDPLV 372
LL+ + +A ++F M G Y++ L G L K G K + +
Sbjct: 247 LLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDG-LCKNGVLFEAMELFNELKSYNFKL 305
Query: 373 NFDTI--FVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGV----VMF 426
+F++ + GL KAGK A ++ +++ G++ N +H + E V ++F
Sbjct: 306 DFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILF 365
Query: 427 EEVGKKLREVG 437
E++ +K+ E G
Sbjct: 366 EKM-EKMEENG 375
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 153/334 (45%), Gaps = 11/334 (3%)
Query: 33 CNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHN-SITFNRMVDIIGKSRNID 91
CN N E + + P + + K C H S+ ++D + K + D
Sbjct: 21 CNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGL-CRVHRISVATCIIIDGLCKVGHED 79
Query: 92 LFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVV 150
E +EM + ++ N ++ + +L++ F+ M D G + +L N ++
Sbjct: 80 EAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLI 139
Query: 151 KTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFE 209
LC+ V+EAK L+ + + I + + Y LI G+C +GDL A K++ M +G E
Sbjct: 140 DILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCE 199
Query: 210 PSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAY 268
+ +I + KI K +EAM ++ +M +V + + + TY ++ + + GK+ A
Sbjct: 200 HNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPN--VKTYSTLLTGLLQTGKVGDAN 257
Query: 269 TMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGL 324
+ M GI D+ + GL G L EA ++ E++ K D Y LI GL
Sbjct: 258 KLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGL 317
Query: 325 LRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+ + A + F+++ + G +P + T +++ G
Sbjct: 318 CKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHG 351
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 109/220 (49%), Gaps = 9/220 (4%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N ++ C+ + A+ L L + S+ + NEI+Y LI GYC + + EA ++N M
Sbjct: 171 NSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQ 230
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKIS 265
G P++ ++ + K +A K+F +M+ + + Y I +D +CK G +
Sbjct: 231 VGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGIS-VDSCIYVIFLDGLCKNGVLF 289
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLI 321
+A + E+ + D + S +I GL G++ A++ +++ + P++ + +I
Sbjct: 290 EAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMI 349
Query: 322 KGLLRLRRAREATQVFREMIK---RGCEPTMHTYIMLLQG 358
G R+ + +A +F +M K GC P + TY LL+G
Sbjct: 350 HGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRG 389
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 131/288 (45%), Gaps = 47/288 (16%)
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIK----- 185
+I+ +C C LN+V + L ++ Y+ P+ + Y LIK
Sbjct: 13 LNILANCLCN-----LNRVSEGLAAMTGILRRGYI---------PDIVTYNTLIKGLCRV 58
Query: 186 ------------GYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
G C VG EA +I+ M +G P++ ++ F K +E+ +
Sbjct: 59 HRISVATCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKR 118
Query: 234 VFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
+F M V + L + ++ID +CK GK+ +A +LE +RGI D +T +S+I G
Sbjct: 119 LFNEM-VDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGF 177
Query: 294 LARGRLREAYKVV-----EEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
G L A K+ + E +IS Y LI G ++ + EA ++ EM + G P
Sbjct: 178 CKIGDLSSARKLFLSMPSKGCEHNEIS-YTILINGYCKIWKVEEAMNLYNEMPQVGKRPN 236
Query: 349 MHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKA-GKSLDAAKYV 395
+ TY LL G L + G+ G D + G++KA G S+D+ YV
Sbjct: 237 VKTYSTLLTGLL-QTGKVG-------DANKLFGVMKASGISVDSCIYV 276
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 102/214 (47%), Gaps = 12/214 (5%)
Query: 72 HNSITFNRMVDIIGKSRNIDL---FWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMV 128
HN I++ +++ K ++ + + ++G+R N KT+ L L + ++
Sbjct: 200 HNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRP--NVKTYSTLLTGLLQTGKVGDAN 257
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGY 187
F +M G + + LC+ ++ EA L +L + K + +Y LI G
Sbjct: 258 KLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGL 317
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C G + A + + ++ EG +P++ + MI F ++ + D+A +F+ M ++M++ G
Sbjct: 318 CKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKM--EKMEENG 375
Query: 248 LS----TYRIVIDWMCKRGKISQAYTMLEEMFKR 277
+ TY ++ C+ K+ + +L +MFKR
Sbjct: 376 CTPDIITYNTLLRGFCESNKLEEVVNLLHKMFKR 409
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 80/180 (44%), Gaps = 28/180 (15%)
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
L T I+ + +C ++S+ + + +RG D +T +++I GL R+ A ++
Sbjct: 10 LFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRISVATCII- 68
Query: 308 EIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL--GKRGR 365
I GL ++ EA ++F EM +G P + +Y L+ G GK
Sbjct: 69 -------------IDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEE 115
Query: 366 ----------KGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
+G P LV F+ + + L K GK ++A K +E + RG+ + YN +
Sbjct: 116 SKRLFNEMVDQGVQPNLVQFN-VLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLI 174
>gi|410109893|gb|AFV61026.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
fucata]
Length = 414
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 136/288 (47%), Gaps = 41/288 (14%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T + L L +++ K + F+ + +CG SL N ++ C+ + A+ + +
Sbjct: 92 TCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAI 151
Query: 170 SEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++W ++P+ ++Y L+ GY +GDL E ++ + M G +P + +I K +K
Sbjct: 152 TKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKI 211
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
D+A ++F M VK + + T+ +ID CK G++ A + ++M + + D +T ++
Sbjct: 212 DDANELFDEMLVKGLVPNSV-TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 270
Query: 289 IIYGLLARGRLREAYKVVEEIE----KPDI------------------------------ 314
+IYGL +G L++A+ +++E+ KPD
Sbjct: 271 LIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQEN 330
Query: 315 -----SLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
+Y LI GL R + +A ++ REM+ G +P TY M++
Sbjct: 331 TRLDDVVYTALISGLCREGXSVDAEKMLREMLSVGLKPDARTYTMIIN 378
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 94/227 (41%), Gaps = 43/227 (18%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
NS+TF ++D K+ +DL E ++M + L D
Sbjct: 229 NSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPD------------------------ 264
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVG 191
L N ++ LC++ + +A +LI ++S + +KP++I Y LI G C G
Sbjct: 265 ----------LITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDG 314
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLST 250
DL A + M E V +I + +A K+ +M+ V D T
Sbjct: 315 DLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGXSVDAEKMLREMLSVGLKPDA--RT 372
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
Y ++I+ CK+G + + +L+EM + D S + Y +L G
Sbjct: 373 YTMIINEFCKKGDVWKGSKLLKEM-----QRDGHVPSVVTYNVLMNG 414
>gi|222640196|gb|EEE68328.1| hypothetical protein OsJ_26607 [Oryza sativa Japonica Group]
Length = 461
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 117/226 (51%), Gaps = 9/226 (3%)
Query: 145 MLNKVVKTLCQRKLVVEAKYLILK-LSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNL 202
+ ++K+LC K A ++L+ ++E P+ +Y L+KG C EA ++ ++
Sbjct: 135 IFTPLLKSLCAEKRTSNAMNIVLRRMTELGCAPHVFSYNILLKGLCHESRSQEALELLHM 194
Query: 203 MTDEGFEPSIDVVD--KMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCK 260
M D+G + DVV +I+ FK D+A + M ++R + TY ++ +CK
Sbjct: 195 MADDGGDCPPDVVSYSTIIDGLFKEGDSDKAYSTYHEM-LERGILPDVVTYNTIVAALCK 253
Query: 261 RGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISL 316
+ +A +L M K G+ D +T +SI++G + G+ +EA ++E++ +PD
Sbjct: 254 AQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVT 313
Query: 317 YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
Y L+ L + R EA ++ MIKRG +P + TY LL G+ K
Sbjct: 314 YTSLMDYLCKNGRCIEARKILDSMIKRGLKPNVITYSTLLHGYATK 359
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 90/195 (46%), Gaps = 4/195 (2%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCG--CEYSLEMLNKVVKTLCQRKLVVEAKYLIL 167
++ I L L ++ + H+M D G C + + ++ L + +A
Sbjct: 171 SYNILLKGLCHESRSQEALELLHMMADDGGDCPPDVVSYSTIIDGLFKEGDSDKAYSTYH 230
Query: 168 KLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKIN 226
++ E I P+ + Y ++ C + +A + N M G P + ++ +
Sbjct: 231 EMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSG 290
Query: 227 KDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTL 286
+ EA+ + + M ++ + TY ++D++CK G+ +A +L+ M KRG++ + +T
Sbjct: 291 QSKEAIGILEKMCSDGVEPDAV-TYTSLMDYLCKNGRCIEARKILDSMIKRGLKPNVITY 349
Query: 287 SSIIYGLLARGRLRE 301
S++++G +G L E
Sbjct: 350 STLLHGYATKGALVE 364
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 113/276 (40%), Gaps = 36/276 (13%)
Query: 214 VVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG----LSTYRIVIDWMCKRGKISQAYT 269
++ + + +D A V R+ R D L TY I+I C+ G++ +
Sbjct: 60 IIRSLNRALAAVARDSPAAAVSGFNRMARSSDGAVTPTLHTYGILIGCCCRAGRLDLGFA 119
Query: 270 MLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV-----EEIEKPDISLYHGLIKGL 324
L + K+G + + + ++ L A R A +V E P + Y+ L+KGL
Sbjct: 120 GLGNVIKKGYRVEPIIFTPLLKSLCAEKRTSNAMNIVLRRMTELGCAPHVFSYNILLKGL 179
Query: 325 LRLRRAREATQVFREMIKRG--CEPTMHTYIMLLQGHLGKRGRKG--------------- 367
R++EA ++ M G C P + +Y ++ G L K G
Sbjct: 180 CHESRSQEALELLHMMADDGGDCPPDVVSYSTIIDG-LFKEGDSDKAYSTYHEMLERGIL 238
Query: 368 PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYS----NEEGV 423
PD +V ++TI V L KA A + R++ GV YN +H Y ++E +
Sbjct: 239 PD-VVTYNTI-VAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAI 296
Query: 424 VMFEEV---GKKLREVGLADLADIFQRYGKKMATRE 456
+ E++ G + V L D + G+ + R+
Sbjct: 297 GILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARK 332
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 60/135 (44%), Gaps = 2/135 (1%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+T+N +V + K++ +D + L M + ++ D T+ + + K+ +
Sbjct: 242 VTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEK 301
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDVGD 192
M G E ++ LC+ +EA K L + +KPN I Y L+ GY G
Sbjct: 302 MCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIKRGLKPNVITYSTLLHGYATKGA 361
Query: 193 LIEASKIWNLMTDEG 207
L+E + +LM +E
Sbjct: 362 LVEMRDLLDLMQNEA 376
>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 566
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 113/226 (50%), Gaps = 6/226 (2%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEA 196
GC S+ N ++ LCQ+ L+ +A L + PN ++ LI+G+C+ + A
Sbjct: 306 GCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRA 365
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVID 256
+ +M G P I + ++ K K D+A+ + + K L +Y VID
Sbjct: 366 IEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSP-SLISYNTVID 424
Query: 257 WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KP 312
+ K GK A +LEEM +G++ D +T +S++ GL G++ EA K ++ KP
Sbjct: 425 GLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKP 484
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+ +Y+ ++ GL + ++ A +M+ GC+PT +Y L++G
Sbjct: 485 NAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKG 530
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 163/358 (45%), Gaps = 24/358 (6%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHIM 134
++N +++ KS I+ E L+ + + N T+ L +L + +LK+ +
Sbjct: 141 SYNVLINAYCKSGEIE---EALRVLDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQ 197
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDL 193
C + ++ C+ V +A L ++ + KP+ + Y LIKG+C G L
Sbjct: 198 LQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRL 257
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
EA + G + + + ++ + + +AMK+ M +++ + T+ I
Sbjct: 258 DEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATM-LRKGCFPSVVTFNI 316
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK-- 311
+I+++C++G + +A +LE M K G ++ + + +I G R + A + +E +
Sbjct: 317 LINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRG 376
Query: 312 --PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR---- 365
PDI Y+ L+ L + + +A + ++ +GC P++ +Y ++ G L K G+
Sbjct: 377 CYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLL-KVGKAELA 435
Query: 366 ---------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
KG P + T VGGL + GK +A K+ + G++ F YN +
Sbjct: 436 VELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIM 493
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 140/335 (41%), Gaps = 20/335 (5%)
Query: 97 LQEMGRRRLVNDKTFKIALM-TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQ 155
L+ M + + D AL+ ++ K I+ + G N ++ C+
Sbjct: 92 LEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANSYNVLINAYCK 151
Query: 156 RKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVV 215
+ EA ++ S + PN Y ++ CD G L +A ++ + P +
Sbjct: 152 SGEIEEALRVLDHTS--VAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTC 209
Query: 216 DKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMF 275
+I+ K + +AMK+F MR K + TY ++I CK G++ +A L+++
Sbjct: 210 TVLIDATCKESGVGQAMKLFNEMRGKGCKP-DVVTYNVLIKGFCKEGRLDEAIIFLKKLP 268
Query: 276 KRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAR 331
G ++D ++ + I+ L + GR +A K++ + + P + ++ LI L +
Sbjct: 269 SYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLG 328
Query: 332 EATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG------------RKGPDPLVNFDTIFV 379
+A V M K G P ++ L+QG ++G +G P + I +
Sbjct: 329 KALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILL 388
Query: 380 GGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
L K GK DA + ++ ++G YN +
Sbjct: 389 TALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVI 423
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 115/243 (47%), Gaps = 22/243 (9%)
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G+L E S+ MT++G P + +I F KI + A ++ ++ + + ++
Sbjct: 83 GELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILE-ESGAVIDANS 141
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE-EI 309
Y ++I+ CK G+I +A +L+ + + T +++ L RG+L++A +V++ ++
Sbjct: 142 YNVLINAYCKSGEIEEALRVLDHT---SVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQL 198
Query: 310 EK---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR- 365
+ PD+ LI + +A ++F EM +GC+P + TY +L++G K GR
Sbjct: 199 QSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFC-KEGRL 257
Query: 366 --------KGPDPLVNFDTI----FVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
K P D I + L G+ +DA K + ++ +G +N
Sbjct: 258 DEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNIL 317
Query: 414 LHY 416
+++
Sbjct: 318 INF 320
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 67/136 (49%), Gaps = 2/136 (1%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
I++N ++D + K +L E L+EM + L D T + L+ ++ + + FFH
Sbjct: 417 ISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHY 476
Query: 134 MNDCGCEYSLEMLNKVVKTLCQ-RKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGD 192
+ G + + + N ++ LC+ ++ + +L+ ++ KP E +Y LIKG G
Sbjct: 477 LKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGL 536
Query: 193 LIEASKIWNLMTDEGF 208
EASK+ N + G
Sbjct: 537 AEEASKLSNELYSRGL 552
>gi|302754000|ref|XP_002960424.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
gi|300171363|gb|EFJ37963.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
Length = 321
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 128/286 (44%), Gaps = 41/286 (14%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILK 168
TF I + L + L +M + GC + + N ++ LC+ EA Y+
Sbjct: 12 TFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGRSAEAYGYIETM 71
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
S + P + Y LI G+C L A +I MT G EP+ + + K K
Sbjct: 72 RSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGKV 131
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEM-------------- 274
D+A+ +F+ M K++ L + Y +ID +C+ GK+++AY++L+EM
Sbjct: 132 DDALALFRAMTEKKI-RLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNA 190
Query: 275 -----------------FKR----GIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPD 313
FKR GI D LT +++G R+ +A ++++++
Sbjct: 191 ILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAG 250
Query: 314 IS----LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
++ +Y+ LI L R R EA ++ +EMI RG P TY ++
Sbjct: 251 LAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRTYALM 296
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 93/191 (48%), Gaps = 13/191 (6%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P + +G L+ G C L +A ++ +M + G P+ V + +++ K + EA
Sbjct: 8 PTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGRSAEAYGY 67
Query: 235 FQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
+ MR +G+S TY I+ID CK K+ +A +L+EM RG E +++T ++ +
Sbjct: 68 IETMR-----SMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFL 122
Query: 291 YGLLARGRLREAYKVVEEIEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCE 346
+GL G++ +A + + + I L Y LI GL + + EA + EM GC
Sbjct: 123 HGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCV 182
Query: 347 PTMHTYIMLLQ 357
P Y +L
Sbjct: 183 PKPGCYNAILS 193
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 84/185 (45%), Gaps = 20/185 (10%)
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
T+ I++D +CK +++ A+ ++E M +RG + L + I+ L GR EAY +E +
Sbjct: 12 TFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGRSAEAYGYIETM 71
Query: 310 EK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
P I Y+ LI G + + A ++ +EM RG EP TY L G L K G
Sbjct: 72 RSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHG-LCKYG- 129
Query: 366 KGPDPLVNFD--------------TIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
K D L F T + GL +AGK +A ++ + N G YN
Sbjct: 130 KVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYN 189
Query: 412 KFLHY 416
L +
Sbjct: 190 AILSW 194
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 117/249 (46%), Gaps = 16/249 (6%)
Query: 69 CFAHNSITFNRMVDII---GKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELK 125
CF N++ FN ++D + G+S + ET++ MG + T+ I + + +L
Sbjct: 41 CFP-NALVFNGIMDALCKEGRSAEAYGYIETMRSMGVSPTI--VTYNILIDGFCKEEKLH 97
Query: 126 KMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLI 184
+ + M G E + N + LC+ V +A L ++E I+ + Y LI
Sbjct: 98 RALEILQEMTGRGHEPNHVTYNTFLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLI 157
Query: 185 KGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD 244
G C G L EA + + M + G P + ++ K ++ +EA K+F KRM
Sbjct: 158 DGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSRINEAHKLF-----KRMT 212
Query: 245 DLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
G+ T+ +++ C+ +I A +L++M G+ + +++I L GR+
Sbjct: 213 GSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPREVIYNTLIDALNRAGRVS 272
Query: 301 EAYKVVEEI 309
EAY++++E+
Sbjct: 273 EAYRLLQEM 281
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 34/188 (18%)
Query: 274 MFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRR 329
M ++G +T ++ GL RL +A+++VE + + P+ +++G++ L + R
Sbjct: 1 MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGR 60
Query: 330 AREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSL 389
+ EA M G PT+ TY I + G K K
Sbjct: 61 SAEAYGYIETMRSMGVSPTIVTY-----------------------NILIDGFCKEEKLH 97
Query: 390 DAAKYVERVMNRGVEVPRFDYNKFLH----YYSNEEGVVMFEEVGKK---LREVGLADLA 442
A + ++ + RG E YN FLH Y ++ + +F + +K L G L
Sbjct: 98 RALEILQEMTGRGHEPNHVTYNTFLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLI 157
Query: 443 DIFQRYGK 450
D + GK
Sbjct: 158 DGLCQAGK 165
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 146/312 (46%), Gaps = 24/312 (7%)
Query: 148 KVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDE 206
++ +C+ + EA L K+ E + PN + Y LI GYC+ GDL A + M +
Sbjct: 248 SLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKK 307
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQ 266
G PS+ + ++ F + EA + + MR K + + TY I+I+ + G +
Sbjct: 308 GIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAI-TYNILINGYSRCGNAKR 366
Query: 267 AYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA----YKVVEEIEKPDISLYHGLIK 322
A+ + EM +GIE ++T +S+IY L R R++EA K++++ PD+ +++ +I
Sbjct: 367 AFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMID 426
Query: 323 GLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG---------------HLGKRGRKG 367
G A + +EM ++ P T+ L+QG + RG K
Sbjct: 427 GHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIK- 485
Query: 368 PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFE 427
PD ++++T+ + G + G DA + +++ G YN + + + E
Sbjct: 486 PDH-ISYNTL-ISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAE 543
Query: 428 EVGKKLREVGLA 439
E+ K++ G++
Sbjct: 544 ELLKEMVNKGIS 555
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 110/222 (49%), Gaps = 13/222 (5%)
Query: 143 LEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNL 202
L + + +V L + KL +++ KPN ++Y +I GY G++ A +I +
Sbjct: 174 LSVKSSIVFDLLEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDA 233
Query: 203 MTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWM 258
M +G EP +I K + +EA +F +M ++GL TY +ID
Sbjct: 234 MRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFD-----KMVEIGLVPNAVTYNTLIDGY 288
Query: 259 CKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDI 314
C +G + +A++ +EM K+GI T + +++ L GR+ EA +++E+ K PD
Sbjct: 289 CNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDA 348
Query: 315 SLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
Y+ LI G R A+ A + EM+ +G EPT TY L+
Sbjct: 349 ITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLI 390
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 118/260 (45%), Gaps = 39/260 (15%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEA 196
G S+ N +V L + EA +I ++ + I P+ I Y LI GY G+ A
Sbjct: 308 GIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRA 367
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ-------------------- 236
+ N M +G EP+ +I + N+ EA +F+
Sbjct: 368 FDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDG 427
Query: 237 ----------MMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEAD 282
M +K MD + T+ ++ C+ GK+ +A +L+EM RGI+ D
Sbjct: 428 HCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPD 487
Query: 283 NLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFR 338
+++ +++I G RG +++A+ V +E+ P + Y+ LIK L + + A ++ +
Sbjct: 488 HISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLK 547
Query: 339 EMIKRGCEPTMHTYIMLLQG 358
EM+ +G P TY+ L++G
Sbjct: 548 EMVNKGISPDDSTYLSLIEG 567
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 100/223 (44%), Gaps = 3/223 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
++IT+N +++ + N ++ EM + + T+ + L+ +K+ + F
Sbjct: 347 DAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLF 406
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDV 190
+ D G + M N ++ C V A L+ ++ + + P+E+ + L++G C
Sbjct: 407 EKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCRE 466
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G + EA + + M G +P + +I + + +A V M + L T
Sbjct: 467 GKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPT-LLT 525
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
Y +I +CK + A +L+EM +GI D+ T S+I G+
Sbjct: 526 YNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 568
>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 614
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 143/311 (45%), Gaps = 55/311 (17%)
Query: 145 MLNKVVKTLCQRKLVVEAKYL----ILK-------------------------------- 168
M N ++ +LC+ KLV+ A L I+K
Sbjct: 206 MYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQM 265
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
L + IKP+ + L+ G C G++ +A + +M +G + +I + +++ +F + ++
Sbjct: 266 LLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQE 325
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
++A VF M +R + +Y I+I+ +CK + +A + +EM + + + +T +S
Sbjct: 326 NKATFVFNTM-ARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNS 384
Query: 289 IIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+I GLL GR+ +A+ +V E+ + D+ Y L+ L + + +A + ++ +G
Sbjct: 385 LIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQG 444
Query: 345 CEPTMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDA 391
+P ++TY +L+ G L K GR KG V + V GL K G +A
Sbjct: 445 IQPNIYTYTILVDG-LCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEA 503
Query: 392 AKYVERVMNRG 402
V ++ + G
Sbjct: 504 LSLVSKMEDNG 514
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 136/315 (43%), Gaps = 39/315 (12%)
Query: 120 EVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIA 179
E+++++ + F+I+ +C C L LN L + I KL P+ +
Sbjct: 91 ELKQIQPDLFTFNILINCFCH--LGHLNFAFSVLAK----------IFKLG--FHPDTVT 136
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
LIKG C G + EA + + +GF +I K + A++V
Sbjct: 137 ITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQV----- 191
Query: 240 VKRMDDL----GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
++++D L + Y +ID +CK + A + EM + I D +T +++IYG L
Sbjct: 192 LRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLI 251
Query: 296 RGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
GRL+EA + ++ KPD+ ++ L+ GL + ++A V MIK+G + + T
Sbjct: 252 VGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVT 311
Query: 352 YIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVM 399
Y L+ G+ R+G P V +I + GL K +A + +
Sbjct: 312 YNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMH 371
Query: 400 NRGVEVPRFDYNKFL 414
++ + YN +
Sbjct: 372 SKSMAPNTVTYNSLI 386
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 130/279 (46%), Gaps = 15/279 (5%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIM 134
TFN +VD + K + L M ++ + N T+ + V++ K F+ M
Sbjct: 276 TFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTM 335
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDL 193
G ++ + ++ LC+ K+V EA L ++ S+ + PN + Y LI G G +
Sbjct: 336 ARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRI 395
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS---- 249
+A + N M + G + +++ K ++ D+A+ + + ++ D G+
Sbjct: 396 SDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITL-----ITKIKDQGIQPNIY 450
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
TY I++D +CK G++ A + +++ +G D + ++ GL G EA +V ++
Sbjct: 451 TYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKM 510
Query: 310 EK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
E PD Y L++ L + +A ++ REMI +G
Sbjct: 511 EDNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQG 549
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 109/246 (44%), Gaps = 28/246 (11%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
++PN + Y +I C +I AS + + M + P + +I + + EA+
Sbjct: 200 VQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAV 259
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
+F M +K + + T+ I++D +CK G++ +A +L M K+G++++ +T +S++ G
Sbjct: 260 GLFNQMLLKNIKP-DVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDG 318
Query: 293 LLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
+ +A V + + PD+ Y +I GL + + EA +F+EM + P
Sbjct: 319 YFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPN 378
Query: 349 MHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRF 408
TY L + GL+K G+ DA V + NRG
Sbjct: 379 TVTYNSL-----------------------IDGLLKYGRISDAWDLVNEMHNRGQPADVI 415
Query: 409 DYNKFL 414
Y+ L
Sbjct: 416 TYSSLL 421
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 74/141 (52%), Gaps = 5/141 (3%)
Query: 216 DKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMF 275
+K++ + K+N A+ + M +K++ L T+ I+I+ C G ++ A+++L ++F
Sbjct: 68 NKILSSLVKLNHFHTAISFSKQMELKQIQP-DLFTFNILINCFCHLGHLNFAFSVLAKIF 126
Query: 276 KRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISL----YHGLIKGLLRLRRAR 331
K G D +T++++I GL G++REA +++ L Y LI GL + R
Sbjct: 127 KLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETR 186
Query: 332 EATQVFREMIKRGCEPTMHTY 352
A QV R++ +P + Y
Sbjct: 187 AALQVLRKIDGLLVQPNVVMY 207
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 81/175 (46%), Gaps = 6/175 (3%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVN 129
A N++T+N ++D + K I W+ + EM R D T+ L L + ++ K +
Sbjct: 376 APNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAIT 435
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEI---AYGWLIKG 186
+ D G + ++ +V LC+ + +A+ + L IK + Y ++ G
Sbjct: 436 LITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDL--LIKGYHLDVKMYNVMVNG 493
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK 241
C G EA + + M D G P + ++ F+ +K+D+A+K+ + M V+
Sbjct: 494 LCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQ 548
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 172/371 (46%), Gaps = 26/371 (7%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
F NS T+ ++ + + +D L ++ +V T ++ + E K +++
Sbjct: 318 FTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMH 377
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYC 188
M GC + N ++ LC++ +V A+ L+ ++ + +PN I Y LI +C
Sbjct: 378 --ESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 435
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
G L EA + + M+ +G + + +I K K +A+ +F M K +
Sbjct: 436 KEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKP-DI 494
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
T+ +I +CK K +A + ++M G+ A+ +T +++I+ L RG ++EA K+V +
Sbjct: 495 FTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVND 554
Query: 309 I-----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
+ DI+ Y+GLIK L R + +F +M+ +G P + +L+ G L +
Sbjct: 555 MLFRGCPLDDIT-YNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILING-LCRT 612
Query: 364 G-------------RKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFD 409
G +G P +V ++++ + GL K G++ +A +++ G+
Sbjct: 613 GNIQHALEFLRDMIHRGLTPDIVTYNSL-INGLCKTGRAQEALNLFDKLQVEGICPDAIT 671
Query: 410 YNKFLHYYSNE 420
YN + ++ E
Sbjct: 672 YNTLISWHCKE 682
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 171/390 (43%), Gaps = 48/390 (12%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHIM 134
TF ++ + +D L++M R V N ++ + L +V + +++ M
Sbjct: 219 TFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEM 278
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGDL 193
GC + N + LC+ + EA L+ + L PN YG L+ G C +G +
Sbjct: 279 LLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKV 338
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ--MMRVKRMDDLGLSTY 251
EA + N + + P++ + + +I + + DEA V M+ V D + TY
Sbjct: 339 DEARMLLNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPD--IFTY 392
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK 311
+I +CK+G + A ++ EM +G E + +T + +I GRL EA V++E+
Sbjct: 393 NTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSG 452
Query: 312 PDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY--------------- 352
++L Y+ LI L + + ++A +F +M +GC+P + T+
Sbjct: 453 KGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEE 512
Query: 353 ------IMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
MLL+G + + ++T+ + ++ G +A K V ++ RG +
Sbjct: 513 ALGLYQDMLLEGVIANT--------ITYNTL-IHAFLRRGAMQEALKLVNDMLFRGCPLD 563
Query: 407 RFDYNKFLHYYSN----EEGVVMFEEVGKK 432
YN + E+G+ +FE++ K
Sbjct: 564 DITYNGLIKALCRAGNIEKGLALFEDMMSK 593
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 128/270 (47%), Gaps = 18/270 (6%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
LS+ I P +G ++K C V ++ A + MT G P+ V +I K+ +
Sbjct: 209 LSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRV 268
Query: 229 DEAMKVFQMMRVKR-MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLS 287
+E +K+ + M + + D+ +T+ I +CK +I +A +++ M RG ++ T
Sbjct: 269 NEVLKLLEEMLLMGCIPDV--NTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYG 326
Query: 288 SIIYGLLARGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFRE-MIKRGCE 346
+++GL G++ EA ++ ++ P++ L++ LI G + R EA V E M+ GC
Sbjct: 327 VLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCG 386
Query: 347 PTMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAK 393
P + TY L+ G L K+G KG +P V TI + K G+ +A
Sbjct: 387 PDIFTYNTLILG-LCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARN 445
Query: 394 YVERVMNRGVEVPRFDYNKFLHYYSNEEGV 423
++ + +G+ + YN + +E V
Sbjct: 446 VLDEMSGKGLALNAVGYNCLISALCKDEKV 475
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 130/291 (44%), Gaps = 7/291 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALMTLAEVRELKKMVNFF 131
N IT+ ++D K ++ L EM G+ +N + + L + +++ +N F
Sbjct: 423 NVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMF 482
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDV 190
M+ GC+ + N ++ LC+ EA L L E + N I Y LI +
Sbjct: 483 GDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRR 542
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G + EA K+ N M G + +I+ + ++ + +F+ M K ++ +S
Sbjct: 543 GAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISC 602
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
I+I+ +C+ G I A L +M RG+ D +T +S+I GL GR +EA + ++++
Sbjct: 603 -NILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQ 661
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
PD Y+ LI + +A + + G P T+ +L+
Sbjct: 662 VEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVS 712
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 94/231 (40%), Gaps = 10/231 (4%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
F NS+ F + + + L+ + L E + T A + ++E K+VN
Sbjct: 495 FTFNSLIFG-LCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVN 553
Query: 130 --FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKG 186
F GC N ++K LC+ + + L + S+ + PN I+ LI G
Sbjct: 554 DMLFR-----GCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILING 608
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
C G++ A + M G P I + +I K + EA+ +F ++V+ +
Sbjct: 609 LCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPD 668
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
+ TY +I W CK G A+ +L G + +T ++ + G
Sbjct: 669 AI-TYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 718
>gi|147767652|emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]
Length = 1563
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 134/299 (44%), Gaps = 43/299 (14%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMT 117
FF + + F H+ + M+D+ GK R DL W+ + M R + + +TF I +
Sbjct: 1164 FFNWATNLEE-FGHSPEPYMEMIDLAGKVRQFDLAWQLIDLMKTRNVEIPVETFTILVRR 1222
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNE 177
+ + V+ F+ M D GC+ + V+ +L +++ +EA+ L + +P+
Sbjct: 1223 YVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKDRFEPDV 1282
Query: 178 IAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQM 237
+ Y L+ G+C G++ EA +++ M G P++
Sbjct: 1283 VVYTSLVHGWCRAGNISEAERVFGEMKMAGIXPNV------------------------- 1317
Query: 238 MRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
TY IVID +C+ G+I++A+ + EM G + + +T ++++ + G
Sbjct: 1318 -----------YTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAG 1366
Query: 298 RLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
R + +V ++++ PD Y+ LI+ R EA ++ +K+GC ++
Sbjct: 1367 RTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNS-VKKGCNLNASSF 1424
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 88/208 (42%), Gaps = 3/208 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N+ITFN ++ + K+ + + +M R D T+ + + L++ V
Sbjct: 1351 NAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKIL 1410
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDV 190
+ + GC + N + + + V A + K+ + +PN + Y L++ + D
Sbjct: 1411 NSVKK-GCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADK 1469
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
K+ M + EP+ + +I TF I + A F+ M ++ L
Sbjct: 1470 KSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPV 1529
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRG 278
Y +V+ + K G++ + ++E+M RG
Sbjct: 1530 YEMVLQQLRKAGQLKKHEELVEKMVNRG 1557
>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
Length = 602
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 129/279 (46%), Gaps = 26/279 (9%)
Query: 95 ETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTL 153
E + EM R N+ TF + + +L L++ + M+ GC ++ N ++ L
Sbjct: 293 ELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGL 352
Query: 154 CQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSI 212
C+++ V A L+ K+ + KP+ + Y L+KG C ++A ++ + MT G P
Sbjct: 353 CEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDN 412
Query: 213 DVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAY 268
+ +I + +A++VF K+M D G + TY +I + K K+ QA
Sbjct: 413 VTFNTLIGFLCQKGLMVDAIEVF-----KQMPDKGCTPNSITYSTIISGLAKATKLDQAL 467
Query: 269 TMLEEMFKRGIEADNLTLSSIIYGLLAR-----GRLREAYKVVEEIEKPDIS----LYHG 319
+ EM +G D IY LLA + EA + V +++ IS LY+
Sbjct: 468 ELFNEMGHKGFNPDK------IYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNA 521
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
++ GL R + A + M+ GC P TY++L++G
Sbjct: 522 ILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEG 560
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 166/352 (47%), Gaps = 23/352 (6%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
N T+ + TL E +++ ++ M GC + N +++ C+ + +A LI
Sbjct: 166 NAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELI 225
Query: 167 -LKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI 225
L +E PN + Y L+ G C GD+ +A ++ + G +PS + +++
Sbjct: 226 DLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSA 285
Query: 226 NK-DDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNL 284
+ D V +M+R + +T+ +VI +C++G + QA +LE+M K G A+ +
Sbjct: 286 ERWGDADELVTEMLRENCPPNE--ATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIV 343
Query: 285 TLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREM 340
T ++II GL + + A ++ +++ KPDI Y+ L+KGL + +A ++ M
Sbjct: 344 TYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNM 403
Query: 341 IKRGCEPTMHTYIMLLQGHLGKRG---------RKGPDPLVNFDTI----FVGGLVKAGK 387
+ GC P T+ L+ G L ++G ++ PD ++I + GL KA K
Sbjct: 404 TQNGCLPDNVTFNTLI-GFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATK 462
Query: 388 SLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLA 439
A + + ++G P Y ++++ + + +KL++ G++
Sbjct: 463 LDQALELFNEMGHKGFN-PDKIYQLLAECLNDDDTIEEAIQTVRKLQDSGIS 513
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/323 (20%), Positives = 145/323 (44%), Gaps = 23/323 (7%)
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGD 192
++ CG ++ + C+ + +A+ ++ + ++PN Y LI C+ G
Sbjct: 125 VVGACGPAATVVAYGALTDGYCRAGRLGDARRVVGGMP--VQPNAYTYNPLIHTLCERGQ 182
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ +A + + M G P + + ++E K +AM++ +MR + + TY
Sbjct: 183 VRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNV-TYN 241
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK- 311
+++D MC G + A +L + G + + ++++ GL + R +A ++V E+ +
Sbjct: 242 VLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRE 301
Query: 312 ---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKG- 367
P+ + ++ +I L R ++A Q+ +M K GC + TY ++ G +R G
Sbjct: 302 NCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGA 361
Query: 368 -------------PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
PD +V ++T+ GL A + +DA + ++ + G +N +
Sbjct: 362 MGLLSKMKSYGCKPD-IVTYNTLL-KGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLI 419
Query: 415 HYYSNEEGVVMFEEVGKKLREVG 437
+ + +V EV K++ + G
Sbjct: 420 GFLCQKGLMVDAIEVFKQMPDKG 442
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 119/261 (45%), Gaps = 16/261 (6%)
Query: 69 CFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKM 127
C A N +T+N +++ + + RN+D L +M D T+ L L +
Sbjct: 338 CTA-NIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDA 396
Query: 128 VNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKG 186
M GC N ++ LCQ+ L+V+A + ++ + PN I Y +I G
Sbjct: 397 EELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISG 456
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFK-INKDDEAMKVFQMMRVKRMDD 245
L +A +++N M +GF P DK+ + + +N DD + Q +R ++ D
Sbjct: 457 LAKATKLDQALELFNEMGHKGFNP-----DKIYQLLAECLNDDDTIEEAIQTVR--KLQD 509
Query: 246 LGLST----YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
G+S Y ++ +C+ GK A ++ M G D+LT +I GL G L E
Sbjct: 510 SGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNE 569
Query: 302 AYKVVEEIEKPDISLYHGLIK 322
A +++ ++ D+ L + LIK
Sbjct: 570 ARELLIKLCSRDV-LVNSLIK 589
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 93/219 (42%), Gaps = 20/219 (9%)
Query: 216 DKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMF 275
D+ + D A+++ + R D L+ R+V D +C+RG+ A ++
Sbjct: 75 DRRLSALVHRGDLDAALRLVE--SSPRPPDAALAN-RLVRD-LCRRGRPDDAERVVGAC- 129
Query: 276 KRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-KPDISLYHGLIKGLLRLRRAREAT 334
G A + ++ G GRL +A +VV + +P+ Y+ LI L + R+A
Sbjct: 130 --GPAATVVAYGALTDGYCRAGRLGDARRVVGGMPVQPNAYTYNPLIHTLCERGQVRDAL 187
Query: 335 QVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFD------------TIFVGGL 382
V +M+ RGC P + TY +LL+ RG + L++ + + G+
Sbjct: 188 SVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGM 247
Query: 383 VKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEE 421
G DA + + + + G + +YN L + E
Sbjct: 248 CGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAE 286
>gi|343887304|dbj|BAK61850.1| PPR containing protein [Citrus unshiu]
Length = 567
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 106/465 (22%), Positives = 187/465 (40%), Gaps = 71/465 (15%)
Query: 58 LFFQYTQKAQPC---FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIA 114
FF + P + H + + + D++ I + L+ + ++D
Sbjct: 73 FFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNK---LSDFFISKL 129
Query: 115 LMTLAEVRELKKMVNFFHI---MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE 171
+ + +K + +FH + + C YS L V+ + KL E + I+K
Sbjct: 130 IKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVK-EN 188
Query: 172 WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEA 231
+ P+ Y +I+GYC +G + A K++++MT +P++ + MI F K + A
Sbjct: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT---VKPNLLAYNTMINGFCKKGDMESA 245
Query: 232 MKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
VF M TY +ID CK+G++ +A + EM RG + LT +++IY
Sbjct: 246 RLVFDRMMSGEDCLPNHVTYTTLIDGYCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIY 305
Query: 292 GLLARGRLREAY---------------------------------------KVVEEIEKP 312
GL GR+ EA V+E P
Sbjct: 306 GLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNP 365
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY-----IMLLQGHLGK----- 362
D+ Y +I G ++ ++ EA + +EM RG +PT+ ++ I++ G L +
Sbjct: 366 DVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLL 425
Query: 363 RGRKGPDPLVNF---DTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN 419
+ D L NF +TI G + G+ D V+R++ G + Y+ L Y
Sbjct: 426 KQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCE 485
Query: 420 EEGV-----VMFEEVGKKLREVGLADLADIFQRYGKKMATRERRR 459
E V + E V KK +GL + + ++ K E +
Sbjct: 486 EGNVENVMQIAHEMVTKKYV-IGLESFSVLVKQLCAKGKVTEAEK 529
>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
Length = 368
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 133/278 (47%), Gaps = 8/278 (2%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T+ + +L + R + + ++ F M G ++ N +++ LC EA ++ ++
Sbjct: 47 TYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEM 106
Query: 170 -SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
S I PN + + LI +C G++ EA + MT+ G EP++ ++ + +
Sbjct: 107 MSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEV 166
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
EA K+F +M K + +Y I+I+ CK +I +A + EM +G+ D ++ ++
Sbjct: 167 FEARKLFDVMITKGCKP-DVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNT 225
Query: 289 IIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+I GL GRLREA+ + + + PD+ Y L+ G + +A ++FR M
Sbjct: 226 LIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTY 285
Query: 345 CEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGL 382
+P M Y +L+ R K L F +FV GL
Sbjct: 286 LKPNMVMYNILIDAMCKSRNLKEARKL--FSELFVQGL 321
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 126/270 (46%), Gaps = 19/270 (7%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T+ + L ++ E F M + GC+ + + ++ +LC+ + V EA + +
Sbjct: 12 TYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYM 71
Query: 170 -SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++ I PN Y LI+G C+ EAS + N M P+I +I F K
Sbjct: 72 KAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNV 131
Query: 229 DEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNL 284
EA V +K M ++G+ TY +++ + ++ +A + + M +G + D
Sbjct: 132 FEARGV-----LKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVF 186
Query: 285 TLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREM 340
+ + +I G R+ EA ++ E+ PDI Y+ LI GL +L R REA +F+ M
Sbjct: 187 SYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNM 246
Query: 341 IKRGCEPTMHTYIMLL-----QGHLGKRGR 365
+ G P + TY +LL QG+L K R
Sbjct: 247 LTNGNLPDLCTYSILLDGFCKQGYLAKAFR 276
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 141/284 (49%), Gaps = 13/284 (4%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND----KTFKIALMTLAEVRELKKMVNF 130
+T++ ++D + K R ++ + M + + + + L + RE M+N
Sbjct: 46 VTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNE 105
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCD 189
+N + +L + C+ V EA+ ++ ++E ++PN + Y L+ GY
Sbjct: 106 MMSLNIMPNIVTFSLL---INIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSL 162
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
++ EA K++++M +G +P + + +I + K + EA ++F M + + +
Sbjct: 163 QAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTP-DIV 221
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
+Y +ID +C+ G++ +A+ + + M G D T S ++ G +G L +A+++ +
Sbjct: 222 SYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAM 281
Query: 310 E----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
+ KP++ +Y+ LI + + R +EA ++F E+ +G +P M
Sbjct: 282 QSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNM 325
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 119/248 (47%), Gaps = 23/248 (9%)
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
+P+ Y +I G C +G+ + A+ ++ M + G +P + +I++ K + +EA+
Sbjct: 7 QPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALD 66
Query: 234 VFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
+F M+ K + + TY +I +C + +A ML EM I + +T S +I
Sbjct: 67 IFSYMKAKGISP-NIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIF 125
Query: 294 LARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
G + EA V++ + +P++ Y L+ G EA ++F MI +GC+P +
Sbjct: 126 CKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDV 185
Query: 350 HTYIMLLQGHLGKRGRKG---------------PDPLVNFDTIFVGGLVKAGKSLDAAKY 394
+Y +L+ G+ K R G PD +V+++T+ + GL + G+ +A
Sbjct: 186 FSYNILINGYC-KAKRIGEAKQLFNEMIHQGLTPD-IVSYNTL-IDGLCQLGRLREAHDL 242
Query: 395 VERVMNRG 402
+ ++ G
Sbjct: 243 FKNMLTNG 250
>gi|224127136|ref|XP_002329409.1| predicted protein [Populus trichocarpa]
gi|222870459|gb|EEF07590.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 134/295 (45%), Gaps = 30/295 (10%)
Query: 179 AYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
AY +I G C G +E ++ M +G + ++ + +I++ K EAM +F+ M
Sbjct: 274 AYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKCGNMGEAMLLFERM 333
Query: 239 RVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR 298
+ + ++ + TY +V++ MCK G++ +A LE G+ + + SS+I GL GR
Sbjct: 334 KKEGLEP-DVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAMLYSSLIDGLGKAGR 392
Query: 299 LREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIM 354
+ EA K+ EE+ K PD Y+ LI L + + EA F+ M GC+ T++TY +
Sbjct: 393 VHEAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKTDEALAFFKRMEDEGCDQTVYTYTI 452
Query: 355 LLQG----HLGKRG--------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
++ G H + KG P GL +GK A K ++ + G
Sbjct: 453 MINGLFREHKNEEALKMWDMMIDKGITPTAAAFRALSIGLCLSGKVARACKLLDELAPMG 512
Query: 403 VEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLADIFQRYGKKMATRER 457
V +P + L+ +++E LAD F G+++ R R
Sbjct: 513 V-IPETAFEDMLNVLCK----------AGRIKEA--CKLADGFVDRGREIPGRVR 554
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 154/353 (43%), Gaps = 26/353 (7%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEV----RELKKMVNF 130
+T+N M+ + +E ++M R + DK I MTL + + ++
Sbjct: 203 VTYNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDK---ITYMTLIQACYAEGDFDLCLSL 259
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCD 189
+H M++ G E + V+ LC+ VE + K+ + K N Y LI
Sbjct: 260 YHEMDENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAK 319
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
G++ EA ++ M EG EP + ++ K + DEAM+ + RV + +
Sbjct: 320 CGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGV-AVNAM 378
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
Y +ID + K G++ +A + EEM K+G D+ +++I L G+ EA + +
Sbjct: 379 LYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKTDEALAFFKRM 438
Query: 310 EKPD----ISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL--GKR 363
E + Y +I GL R + EA +++ MI +G PT + L G GK
Sbjct: 439 EDEGCDQTVYTYTIMINGLFREHKNEEALKMWDMMIDKGITPTAAAFRALSIGLCLSGKV 498
Query: 364 GRK----------GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
R G P F+ + + L KAG+ +A K + ++RG E+P
Sbjct: 499 ARACKLLDELAPMGVIPETAFEDM-LNVLCKAGRIKEACKLADGFVDRGREIP 550
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 105/451 (23%), Positives = 190/451 (42%), Gaps = 61/451 (13%)
Query: 10 RVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRP--VYLFFQYTQKAQ 67
++ ++L ESRL + L+ F + + L RP FF + K Q
Sbjct: 32 QIMSLLLDGPVDMESRLDLFCNKFLIKLSPNFVSFVLKSMELQKRPDLALKFFTWAGK-Q 90
Query: 68 PCFAHNSITFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALMTLAEVRELKK 126
+ HN + +D++ + ++D + G L+N + + + +++
Sbjct: 91 KKYTHNLQCYVSSIDVLAINGDLDNVKSVFCKFRGMGFLMNVSAANSLIKSFGSLGMVEE 150
Query: 127 MVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE--WIKPNEIAYGWLI 184
++ + M + G E SL N ++ L + +E+ +L++ E I P+ + Y +I
Sbjct: 151 LLWVWRGMKENGVEPSLFTYNFLLNGLVN-SVFIESAERVLEVMENGKIGPDVVTYNTMI 209
Query: 185 KGYCDVG-------------------------DLIEAS----------KIWNLMTDEGFE 209
KGYC VG LI+A +++ M + G E
Sbjct: 210 KGYCQVGKTQKAFEKFRDMELRNVAPDKITYMTLIQACYAEGDFDLCLSLYHEMDENGLE 269
Query: 210 PSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYT 269
+I K K E VF+ M +++ + ++ Y +ID K G + +A
Sbjct: 270 IPPHAYSLVIGGLCKEGKCVEGYAVFEKM-IQKGCKVNVAIYTALIDSNAKCGNMGEAML 328
Query: 270 MLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDIS----LYHGLIKGLL 325
+ E M K G+E D +T ++ + GRL EA + +E ++ LY LI GL
Sbjct: 329 LFERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAMLYSSLIDGLG 388
Query: 326 RLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR-------------KGPDPLV 372
+ R EA ++F EM+K+GC P + Y L+ L K G+ +G D V
Sbjct: 389 KAGRVHEAEKLFEEMVKKGCPPDSYCYNALIDA-LAKCGKTDEALAFFKRMEDEGCDQTV 447
Query: 373 NFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
TI + GL + K+ +A K + ++++G+
Sbjct: 448 YTYTIMINGLFREHKNEEALKMWDMMIDKGI 478
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 105/237 (44%), Gaps = 4/237 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N + ++D K N+ + M + L D T+ + + + + L + + +
Sbjct: 306 NVAIYTALIDSNAKCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYL 365
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
G + + + ++ L + V EA+ L ++ + P+ Y LI
Sbjct: 366 EFCRVNGVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNALIDALAKC 425
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G EA + M DEG + ++ MI F+ +K++EA+K++ MM K + +
Sbjct: 426 GKTDEALAFFKRMEDEGCDQTVYTYTIMINGLFREHKNEEALKMWDMMIDKGITPTA-AA 484
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
+R + +C GK+++A +L+E+ G+ + ++ L GR++EA K+ +
Sbjct: 485 FRALSIGLCLSGKVARACKLLDELAPMGVIPET-AFEDMLNVLCKAGRIKEACKLAD 540
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 85/182 (46%), Gaps = 26/182 (14%)
Query: 274 MFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRR 329
M + G+E T + ++ GL+ + A +V+E +E PD+ Y+ +IKG ++ +
Sbjct: 158 MKENGVEPSLFTYNFLLNGLVNSVFIESAERVLEVMENGKIGPDVVTYNTMIKGYCQVGK 217
Query: 330 AREATQVFREMIKRGCEPTMHTYIMLLQG---------------HLGKRGRKGPDPLVNF 374
++A + FR+M R P TY+ L+Q + + G + P +
Sbjct: 218 TQKAFEKFRDMELRNVAPDKITYMTLIQACYAEGDFDLCLSLYHEMDENGLEIPP---HA 274
Query: 375 DTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN----EEGVVMFEEVG 430
++ +GGL K GK ++ E+++ +G +V Y + + E +++FE +
Sbjct: 275 YSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKCGNMGEAMLLFERMK 334
Query: 431 KK 432
K+
Sbjct: 335 KE 336
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 145/318 (45%), Gaps = 52/318 (16%)
Query: 58 LFFQYTQKAQPCFAHNSITFNRMVDIIGKS-------RNIDLFWETLQEMGRRRLVNDKT 110
LF + A+P FN+++ ++ ++ R + LF +E + N T
Sbjct: 36 LFDELLHCARPASVR---AFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPNACT 92
Query: 111 FKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAK-YLILKL 169
+ I + + L+ F ++ G ++ ++++++K LC K V EA L+L++
Sbjct: 93 YSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLRM 152
Query: 170 SEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
SE+ P+ +AY +I G+ G + +A ++ M D+G P++
Sbjct: 153 SEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNV---------------- 196
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
TY VID +CK + +A + ++M RG++ DN T +
Sbjct: 197 --------------------VTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNC 236
Query: 289 IIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+I+G L+ G+ +E +++EE+ +PD Y L+ L + R REA F M ++G
Sbjct: 237 LIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKG 296
Query: 345 CEPTMHTYIMLLQGHLGK 362
+P + Y +LL G+ K
Sbjct: 297 IKPDVAIYAILLHGYATK 314
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 155/366 (42%), Gaps = 33/366 (9%)
Query: 58 LFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALM 116
LF + + P N +T+ ++D + K++ +D Q+M R + D T+ +
Sbjct: 183 LFLEMMDQGIP---PNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIH 239
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKP 175
+ K++V M+ G E ++ LC+ EA+ + + IKP
Sbjct: 240 GYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKP 299
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
+ Y L+ GY G L E +LM G P+ + + M + K +EAM +F
Sbjct: 300 DVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIF 359
Query: 236 QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
MR + + + ++ +ID +CK G++ A +M G+ + SS++YGL
Sbjct: 360 NKMRQQGLSP-DVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCT 418
Query: 296 RGRLREA----YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
G+ +A ++V+++ D ++ L+ L R EA ++ MI+ G P + +
Sbjct: 419 VGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVIS 478
Query: 352 YIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
Y L+ GH G+ +AAK ++ +++ G++ F Y
Sbjct: 479 YNTLVAGH-----------------------CLTGRIDEAAKLLDVMVSNGLKPNEFTYT 515
Query: 412 KFLHYY 417
L Y
Sbjct: 516 ILLRGY 521
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 176/401 (43%), Gaps = 32/401 (7%)
Query: 26 LHSSLSSCNFNLTHEFFLQICNNFPLSWRPVY--LFFQYTQKA-------------QPCF 70
LH + + H F + N R ++ +F Y +KA Q
Sbjct: 308 LHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGL 367
Query: 71 AHNSITFNRMVDIIGK-SRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
+ + ++F ++D + K R D + Q + N F + L V + +K
Sbjct: 368 SPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEE 427
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYC 188
F + D G N ++ LC V+EA+ LI L + ++PN I+Y L+ G+C
Sbjct: 428 LFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHC 487
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
G + EA+K+ ++M G +P+ ++ + K + D+A +F+ M +K + + +
Sbjct: 488 LTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPV-V 546
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
+TY ++ + + G+ S+A + M + D T + I+ GL + EA+K+
Sbjct: 547 ATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRR 606
Query: 309 IEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
+ D L ++ +I LL+ R +A +F + G P + TY L+ +L + G
Sbjct: 607 LCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTY-RLIAENLIEEG 665
Query: 365 RKGPDPLVNFDTIFVGGLVKAGKSLDA---AKYVERVMNRG 402
G FD +F + K+G + ++ V R+++RG
Sbjct: 666 SLG-----EFDGLF-SAMEKSGTAPNSHMLNALVRRLLHRG 700
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 131/309 (42%), Gaps = 18/309 (5%)
Query: 123 ELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYG 181
+++K N F M D G ++ V+ LC+ ++V AK + ++ + +KP+ Y
Sbjct: 176 QVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYN 235
Query: 182 WLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK 241
LI GY G E ++ M+ G EP +++ K + EA F M K
Sbjct: 236 CLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRK 295
Query: 242 RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
+ ++ Y I++ +G +S+ ++ L+ M G+ + + + + + E
Sbjct: 296 GIKP-DVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEE 354
Query: 302 AYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
A + ++ + PD+ + LI L +L R +A F +MI G P + + L+
Sbjct: 355 AMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVY 414
Query: 358 G--HLGKRGRKGP------DPLVNFDTIFVG----GLVKAGKSLDAAKYVERVMNRGVEV 405
G +GK + D + D +F L G+ ++A + ++ ++ GV
Sbjct: 415 GLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRP 474
Query: 406 PRFDYNKFL 414
YN +
Sbjct: 475 NVISYNTLV 483
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 93/219 (42%), Gaps = 34/219 (15%)
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV--- 306
TY I+I C+ G++ + + K G + + +S ++ GL R+ EA ++
Sbjct: 92 TYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLR 151
Query: 307 --EEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
E PD+ Y+ +I G R + +A +F EM+ +G P + TY
Sbjct: 152 MSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTY------------ 199
Query: 365 RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYV-ERVMNRGVEVPRFDYNKFLHYYSN---- 419
T + GL KA + +D AK V +++++RGV+ YN +H Y +
Sbjct: 200 -----------TTVIDGLCKA-QVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKW 247
Query: 420 EEGVVMFEEVGKKLREVGLADLADIFQRYGKKMATRERR 458
+E V M EE+ E A + K RE R
Sbjct: 248 KEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREAR 286
>gi|334182978|ref|NP_001185123.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|332193283|gb|AEE31404.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 811
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 154/334 (46%), Gaps = 17/334 (5%)
Query: 40 EFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQE 99
+F ++ C + + + + +F Y+ + +S+ RM++ + S +DL + +
Sbjct: 150 KFLMECCCRYGMVDKALEIFV-YSTQLGVVIPQDSVY--RMLNSLIGSDRVDLIADHFDK 206
Query: 100 MGRRRL----VNDKTFKI-ALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLC 154
+ R + V+ F + AL EV K ++F ++ + G + NKV+K L
Sbjct: 207 LCRGGIEPSGVSAHGFVLDALFCKGEV---TKALDFHRLVMERGFRVGIVSCNKVLKGLS 263
Query: 155 QRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDV 214
++ V ++ L L L PN + + LI G+C G++ A ++ +M G EP +
Sbjct: 264 VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIA 323
Query: 215 VDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEM 274
+I+ +FK K+F K + L + + ID K G ++ A + + M
Sbjct: 324 YSTLIDGYFKAGMLGMGHKLFSQALHKGV-KLDVVVFSSTIDVYVKSGDLATASVVYKRM 382
Query: 275 FKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRA 330
+GI + +T + +I GL GR+ EA+ + +I K P I Y LI G +
Sbjct: 383 LCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNL 442
Query: 331 REATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
R ++ +MIK G P + Y +L+ G L K+G
Sbjct: 443 RSGFALYEDMIKMGYPPDVVIYGVLVDG-LSKQG 475
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 136/287 (47%), Gaps = 13/287 (4%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTF----KIALMTLAEVRELKKM 127
N + FN ++D + D + + MG + D TF ++++M A + +K
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPT 554
Query: 128 VNF--FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLI 184
+ F +M + + N V+ L + + +A L E ++P+ + Y +I
Sbjct: 555 IGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMI 614
Query: 185 KGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD 244
GYC + L EA +I+ L+ F P+ + +I K N D A+++F +M ++
Sbjct: 615 CGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIM-AEKGS 673
Query: 245 DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA-- 302
TY ++DW K I ++ + EEM ++GI ++ S II GL RGR+ EA
Sbjct: 674 KPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATN 733
Query: 303 --YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
++ ++ PD+ Y LI+G ++ R EA ++ M++ G +P
Sbjct: 734 IFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKP 780
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 138/310 (44%), Gaps = 49/310 (15%)
Query: 95 ETLQEMGRRRLVNDKTFKIALMTLAEV------RELKKMVNFFHIMNDCGCEYSLEMLNK 148
E + + RLV ++ F++ +++ +V +++ ++ DCG ++
Sbjct: 232 EVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCT 291
Query: 149 VVKTLCQRKLVVEAKYLILKLSE--WIKPNEIAYGWLIKGY------------------- 187
++ C+R + A + + K+ E I+P+ IAY LI GY
Sbjct: 292 LINGFCKRGEMDRA-FDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHK 350
Query: 188 ------------CDV----GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEA 231
DV GDL AS ++ M +G P++ +I+ + + EA
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA 410
Query: 232 MKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
++ + +KR + + TY +ID CK G + + + E+M K G D + ++
Sbjct: 411 FGMYGQI-LKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 469
Query: 292 GLLARG----RLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
GL +G +R + K++ + + ++ +++ LI G RL R EA +VFR M G +P
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP 529
Query: 348 TMHTYIMLLQ 357
+ T+ +++
Sbjct: 530 DVATFTTVMR 539
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 93/193 (48%), Gaps = 11/193 (5%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+ + YG L+ G G ++ A + M + ++ V + +I+ + ++N+ DEA+KV
Sbjct: 459 PDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKV 518
Query: 235 FQMMRVKRMDDLGLSTYRIVI------DWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
F++M + + ++T+ V+ D CK K + + + M + I AD +
Sbjct: 519 FRLMGIYGIKP-DVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNV 577
Query: 289 IIYGLLARGRLREAYK----VVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+I+ L R+ +A K ++E +PDI Y+ +I G LRR EA ++F +
Sbjct: 578 VIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTP 637
Query: 345 CEPTMHTYIMLLQ 357
P T +L+
Sbjct: 638 FGPNTVTLTILIH 650
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 94/240 (39%), Gaps = 46/240 (19%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
L + I PN + Y LIKG C G + EA ++ + G EPSI +I+ F K
Sbjct: 383 LCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNL 442
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
+++ M +K + Y +++D + K+G + A +M + I + + +S
Sbjct: 443 RSGFALYEDM-IKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNS 501
Query: 289 IIYGLLARGRLREAYKVVEEIE----KPDISLY--------------------------- 317
+I G R EA KV + KPD++ +
Sbjct: 502 LIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFD 561
Query: 318 --------------HGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
+ +I L + R +A++ F +I+ EP + TY ++ G+ R
Sbjct: 562 LMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLR 621
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
KPN + YG L+ + D+ + K++ M ++G PSI +I+ K + DEA
Sbjct: 674 KPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATN 733
Query: 234 VF-QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNL 284
+F Q + K + D+ Y I+I CK G++ +A + E M + G++ D+L
Sbjct: 734 IFHQAIDAKLLPDV--VAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 783
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 88/190 (46%), Gaps = 6/190 (3%)
Query: 182 WLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK 241
+L++ C G + +A +I+ T G D V +M+ + ++ D F +
Sbjct: 151 FLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRG 210
Query: 242 RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
++ G+S + V+D + +G++++A + +RG ++ + ++ G L+ ++
Sbjct: 211 GIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKG-LSVDQIEV 269
Query: 302 AYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
A +++ + P++ + LI G + A +F+ M +RG EP + Y L+
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329
Query: 358 GHLGKRGRKG 367
G+ K G G
Sbjct: 330 GYF-KAGMLG 338
>gi|356577532|ref|XP_003556878.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 932
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 142/294 (48%), Gaps = 7/294 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGR-RRLVNDKTFKIALMTLAEVRELKKMVNFFHI 133
+ +N ++ N+D +++M + R +TF + A E+++ + F +
Sbjct: 530 VLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTFLPIIHGFARAGEMRRALEIFDM 589
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGD 192
M GC ++ N ++ L +++ + +A ++ +++ + PNE Y L++GY +GD
Sbjct: 590 MRRSGCIPTVHTYNALILGLVEKRQMTKAVAILDEMNVAGVGPNEHTYTTLMQGYASLGD 649
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+A + + ++ +EG E + + ++++ K + A+ V + M K + Y
Sbjct: 650 TEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTF-VYN 708
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
I+ID +RG + +A ++++M K G+ D T +S I G +++A ++++E+E
Sbjct: 709 ILIDGWARRGDVWEAADLMQQMRKEGLLPDIHTYTSFINACCKAGDMQKATEIIQEMEAS 768
Query: 311 --KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
KP++ Y LI G R +A F EM G +P Y L+ L +
Sbjct: 769 GIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAGFKPDKAVYHCLVTSLLSR 822
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/426 (19%), Positives = 170/426 (39%), Gaps = 60/426 (14%)
Query: 42 FLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMG 101
F +I P +W+ V F+ +K + MV G+ ++ +T + M
Sbjct: 258 FQKILETQPENWQAVVTAFERIKKPA------RKEYGLMVKYYGRRGDMHHARQTFESMR 311
Query: 102 RRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVV 160
R + + + + A R++++ ++ M + G E ++ + +V +
Sbjct: 312 ARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMKEEGIEMTIVTYSIIVGGFAKMGNAD 371
Query: 161 EAKYLILKLSEWIKP-NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKM- 218
A + + E + N + YG +I +C + ++ A + M ++G + ID+ M
Sbjct: 372 AADHWFEEAKEKLPSLNAVIYGGIIYAHCQICNMDRAEALVREMEEQGIDAPIDIYHTMM 431
Query: 219 ----------------------------------IETFFKINKDDEAMKVFQMMRVKRMD 244
I + K+ K +A+++ +MM++ +
Sbjct: 432 DGYTMIGNEEKCLIVFDRLKECGFFPSVISYGCLINLYTKVGKVSKALEISKMMKMSGIK 491
Query: 245 DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK 304
+ TY ++I+ K + A+++ E+ K G++ D + ++II G + A
Sbjct: 492 H-NMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMGNMDRAIC 550
Query: 305 VVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL 360
+V +++K P + +I G R R A ++F M + GC PT+HTY L+ G +
Sbjct: 551 MVRQMQKERHRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLV 610
Query: 361 GKR------------GRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRF 408
KR G P + T + G G + A +Y + N G+E+ +
Sbjct: 611 EKRQMTKAVAILDEMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFTVLRNEGLEIDVY 670
Query: 409 DYNKFL 414
Y L
Sbjct: 671 TYEALL 676
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 96/230 (41%), Gaps = 3/230 (1%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIM 134
T+N ++ + + R + L EM + N+ T+ + A + + +K +F ++
Sbjct: 601 TYNALILGLVEKRQMTKAVAILDEMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFTVL 660
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKP-NEIAYGWLIKGYCDVGDL 193
+ G E + ++K+ C+ + A + ++S P N Y LI G+ GD+
Sbjct: 661 RNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDV 720
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
EA+ + M EG P I I K +A ++ Q M + L TY
Sbjct: 721 WEAADLMQQMRKEGLLPDIHTYTSFINACCKAGDMQKATEIIQEMEASGIKP-NLKTYTT 779
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
+I+ + +A + EEM G + D ++ LL+R ++Y
Sbjct: 780 LINGWARASMPEKALSCFEEMKLAGFKPDKAVYHCLVTSLLSRATFAQSY 829
>gi|22128708|gb|AAM92820.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31432840|gb|AAP54427.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
Length = 517
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 113/223 (50%), Gaps = 10/223 (4%)
Query: 149 VVKTLCQRKLVVEAKYLILKLSEWIK--PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDE 206
++K LC K +A ++L+ + P+ + L+KG CD EA ++ ++M D+
Sbjct: 273 LLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADD 332
Query: 207 ---GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGK 263
G P + +I FFK D+A + M +R+ + TY +I +CK
Sbjct: 333 RGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISP-NVVTYSSIIAALCKAQA 391
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHG 319
+ +A +L M K G+ D +T +SI++G + G+ +EA ++++ +P++ Y
Sbjct: 392 MDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYRS 451
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
L+ L + R EA ++F M KRG EP + TY LLQG+ K
Sbjct: 452 LMNYLCKNGRCTEARKIFDSMTKRGLEPDIATYRTLLQGYATK 494
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 69/139 (49%), Gaps = 1/139 (0%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
L I PN + Y +I C + +A ++ N M G P + ++ + +
Sbjct: 368 LDRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQP 427
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
EA+ + MR ++ + TYR +++++CK G+ ++A + + M KRG+E D T +
Sbjct: 428 KEAIGTLKKMRSDGVEP-NVVTYRSLMNYLCKNGRCTEARKIFDSMTKRGLEPDIATYRT 486
Query: 289 IIYGLLARGRLREAYKVVE 307
++ G +G L E + +++
Sbjct: 487 LLQGYATKGALVEMHALLD 505
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 104/247 (42%), Gaps = 34/247 (13%)
Query: 221 TFFKINKDDEAMKVFQMMRVKRM--DDL--GLSTYRIVIDWMCKRGKISQAYTMLEEMFK 276
T + +D A V R+ R D++ L TY I+I C+ G++ + L + K
Sbjct: 201 TLTDVARDSPAAAVSLFNRMARAGADEVTPDLCTYSILIGCCCRAGRLDLGFAALGNVIK 260
Query: 277 RGIEADNLTLSSIIYGLLARGRLREAYKVV-----EEIEKPDISLYHGLIKGLLRLRRAR 331
+G + +T + ++ GL A R +A +V E PD+ L+KGL R++
Sbjct: 261 KGFRVEAITFAPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQ 320
Query: 332 EATQVFREMIKR---GCEPTMHTYIMLLQGHLGKRG---------------RKGPDPLVN 373
EA ++ M G P + +Y ++ G K G R P+ +V
Sbjct: 321 EALELLHMMADDRGGGSPPDVVSYTTVINGFF-KEGDSDKAYSTYHEMLDRRISPN-VVT 378
Query: 374 FDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVG--K 431
+ +I + L KA A + + ++ GV YN LH Y + E +G K
Sbjct: 379 YSSI-IAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPK--EAIGTLK 435
Query: 432 KLREVGL 438
K+R G+
Sbjct: 436 KMRSDGV 442
Score = 42.0 bits (97), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 64/139 (46%), Gaps = 2/139 (1%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMV 128
+ N +T++ ++ + K++ +D E L M + ++ D T+ L + K+ +
Sbjct: 372 ISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAI 431
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGY 187
M G E ++ ++ LC+ EA+ + +++ ++P+ Y L++GY
Sbjct: 432 GTLKKMRSDGVEPNVVTYRSLMNYLCKNGRCTEARKIFDSMTKRGLEPDIATYRTLLQGY 491
Query: 188 CDVGDLIEASKIWNLMTDE 206
G L+E + +LM E
Sbjct: 492 ATKGALVEMHALLDLMDPE 510
>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g31840
gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 840
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 154/334 (46%), Gaps = 17/334 (5%)
Query: 40 EFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQE 99
+F ++ C + + + + +F Y+ + +S+ RM++ + S +DL + +
Sbjct: 150 KFLMECCCRYGMVDKALEIFV-YSTQLGVVIPQDSVY--RMLNSLIGSDRVDLIADHFDK 206
Query: 100 MGRRRL----VNDKTFKI-ALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLC 154
+ R + V+ F + AL EV K ++F ++ + G + NKV+K L
Sbjct: 207 LCRGGIEPSGVSAHGFVLDALFCKGEV---TKALDFHRLVMERGFRVGIVSCNKVLKGLS 263
Query: 155 QRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDV 214
++ V ++ L L L PN + + LI G+C G++ A ++ +M G EP +
Sbjct: 264 VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIA 323
Query: 215 VDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEM 274
+I+ +FK K+F K + L + + ID K G ++ A + + M
Sbjct: 324 YSTLIDGYFKAGMLGMGHKLFSQALHKGV-KLDVVVFSSTIDVYVKSGDLATASVVYKRM 382
Query: 275 FKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRA 330
+GI + +T + +I GL GR+ EA+ + +I K P I Y LI G +
Sbjct: 383 LCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNL 442
Query: 331 REATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
R ++ +MIK G P + Y +L+ G L K+G
Sbjct: 443 RSGFALYEDMIKMGYPPDVVIYGVLVDG-LSKQG 475
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 110/225 (48%), Gaps = 6/225 (2%)
Query: 128 VNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKG 186
+ F +M + + N V+ L + + +A L E ++P+ + Y +I G
Sbjct: 586 LQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICG 645
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
YC + L EA +I+ L+ F P+ + +I K N D A+++F +M ++
Sbjct: 646 YCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIM-AEKGSKP 704
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA---- 302
TY ++DW K I ++ + EEM ++GI ++ S II GL RGR+ EA
Sbjct: 705 NAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIF 764
Query: 303 YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
++ ++ PD+ Y LI+G ++ R EA ++ M++ G +P
Sbjct: 765 HQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKP 809
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 138/310 (44%), Gaps = 49/310 (15%)
Query: 95 ETLQEMGRRRLVNDKTFKIALMTLAEV------RELKKMVNFFHIMNDCGCEYSLEMLNK 148
E + + RLV ++ F++ +++ +V +++ ++ DCG ++
Sbjct: 232 EVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCT 291
Query: 149 VVKTLCQRKLVVEAKYLILKLSE--WIKPNEIAYGWLIKGY------------------- 187
++ C+R + A + + K+ E I+P+ IAY LI GY
Sbjct: 292 LINGFCKRGEMDRA-FDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHK 350
Query: 188 ------------CDV----GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEA 231
DV GDL AS ++ M +G P++ +I+ + + EA
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA 410
Query: 232 MKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
++ + +KR + + TY +ID CK G + + + E+M K G D + ++
Sbjct: 411 FGMYGQI-LKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 469
Query: 292 GLLARG----RLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
GL +G +R + K++ + + ++ +++ LI G RL R EA +VFR M G +P
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP 529
Query: 348 TMHTYIMLLQ 357
+ T+ +++
Sbjct: 530 DVATFTTVMR 539
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 97/193 (50%), Gaps = 5/193 (2%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+ + YG L+ G G ++ A + M + ++ V + +I+ + ++N+ DEA+KV
Sbjct: 459 PDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKV 518
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
F++M + + ++T+ V+ G++ +A + MFK G+E D L ++I
Sbjct: 519 FRLMGIYGIKP-DVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFC 577
Query: 295 ARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
+ ++ + +++ DI++ + +I L + R +A++ F +I+ EP +
Sbjct: 578 KHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIV 637
Query: 351 TYIMLLQGHLGKR 363
TY ++ G+ R
Sbjct: 638 TYNTMICGYCSLR 650
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
KPN + YG L+ + D+ + K++ M ++G PSI +I+ K + DEA
Sbjct: 703 KPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATN 762
Query: 234 VF-QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNL 284
+F Q + K + D+ Y I+I CK G++ +A + E M + G++ D+L
Sbjct: 763 IFHQAIDAKLLPDV--VAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 812
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/304 (20%), Positives = 123/304 (40%), Gaps = 53/304 (17%)
Query: 149 VVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEG 207
+V L ++ L++ A ++ + L + I+ N + + LI G+C + EA K++ LM G
Sbjct: 467 LVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYG 526
Query: 208 FEPSIDVVDK-----------------------------------MIETFFKINKDDEAM 232
+P + +I+ F K K +
Sbjct: 527 IKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGL 586
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
++F +M+ ++ ++ +VI + K +I A + + +E D +T +++I G
Sbjct: 587 QLFDLMQRNKI-SADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICG 645
Query: 293 LLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
+ RL EA ++ E ++ P+ LI L + A ++F M ++G +P
Sbjct: 646 YCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPN 705
Query: 349 MHTYIMLL---------QGHLG---KRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVE 396
TY L+ +G + KG P + +I + GL K G+ +A
Sbjct: 706 AVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFH 765
Query: 397 RVMN 400
+ ++
Sbjct: 766 QAID 769
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 88/190 (46%), Gaps = 6/190 (3%)
Query: 182 WLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK 241
+L++ C G + +A +I+ T G D V +M+ + ++ D F +
Sbjct: 151 FLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRG 210
Query: 242 RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
++ G+S + V+D + +G++++A + +RG ++ + ++ G L+ ++
Sbjct: 211 GIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKG-LSVDQIEV 269
Query: 302 AYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
A +++ + P++ + LI G + A +F+ M +RG EP + Y L+
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329
Query: 358 GHLGKRGRKG 367
G+ K G G
Sbjct: 330 GYF-KAGMLG 338
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 142/297 (47%), Gaps = 15/297 (5%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALM-TLAEVRELKKMVNFF 131
+++T+N ++ + S L++M +R++ + F AL+ T + L + N +
Sbjct: 743 DAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLY 802
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDV 190
M ++ N ++ C + +AKY+ L +S+ P+ + Y LI G+C
Sbjct: 803 KEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKS 862
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS- 249
+ + K++ MT +G + +I + + K + A KVF RM D G+S
Sbjct: 863 KRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFN-----RMVDCGVSP 917
Query: 250 ---TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
TY I++D +C GKI +A M+E++ K ++ D +T + II GL +L+EA+ +
Sbjct: 918 DIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLF 977
Query: 307 EEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
+ KPD Y +I GL R REA ++ R M + G P+ Y L+ H
Sbjct: 978 RSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDH 1034
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 146/308 (47%), Gaps = 7/308 (2%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMV 128
F N + +N +++ + K+R+++ E M ++ + D T+ + L+
Sbjct: 705 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 764
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGY 187
M + ++ ++ T + ++EA+ L ++ + PN Y LI G+
Sbjct: 765 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 824
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C G L +A +++LM +G P + + +I F K + ++ MK+F M + +
Sbjct: 825 CIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDA 884
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
TY +I C+ GK++ A + M G+ D +T + ++ L G++ +A +VE
Sbjct: 885 F-TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 943
Query: 308 EIEKP----DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
+++K DI Y+ +I+GL R + +EA +FR + ++G +P YI ++ G K
Sbjct: 944 DLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 1003
Query: 364 GRKGPDPL 371
++ D L
Sbjct: 1004 LQREADKL 1011
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 157/364 (43%), Gaps = 42/364 (11%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTL 118
F Y +K + F H SI F LF+E + +V+ F L
Sbjct: 35 FSDYREKLRTGFLH-SIRFEDA---------FALFFEMVHSQPLPSIVD---FTRLLTAT 81
Query: 119 AEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNE 177
A +R + ++ F M G + L ++ C+ + A ++ K+ + +P+
Sbjct: 82 ANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSI 141
Query: 178 IAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQM 237
+ +G L+ G+C V + +A + LM G+EP++ V + +I+ K + + A+++
Sbjct: 142 VTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNE 201
Query: 238 MRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
M K + + TY ++ +C G+ S A ML +M KR I D +T +++I + +G
Sbjct: 202 MEKKGL-GADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQG 260
Query: 298 RLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYI 353
L EA ++ +E+ + P+ Y+ +I GL R +A + F M +GC P + TY
Sbjct: 261 NLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYN 320
Query: 354 MLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
L+ G R +V G K +R+ G F YN
Sbjct: 321 TLISGFCKFR------------------MVDEG-----MKLFQRMSCEGFNADIFTYNTL 357
Query: 414 LHYY 417
+H Y
Sbjct: 358 IHGY 361
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 136/306 (44%), Gaps = 7/306 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N + +N ++D + K+ +++ E L EM ++ L D T+ L L
Sbjct: 175 NVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARML 234
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
M + ++ ++ + EA+ L ++ + PN + Y +I G C
Sbjct: 235 RDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMH 294
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G L +A K ++LM +G P++ + +I F K DE MK+FQ M + + + T
Sbjct: 295 GRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF-NADIFT 353
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y +I C+ GK+ A + M R + D +T +++GL G + A +++
Sbjct: 354 YNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMR 413
Query: 311 KPD----ISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK 366
+ + I Y+ +I GL + + +A ++F + G +P TY +++ G R+
Sbjct: 414 ESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRR 473
Query: 367 GPDPLV 372
D L+
Sbjct: 474 EADELI 479
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 167/379 (44%), Gaps = 31/379 (8%)
Query: 92 LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVK 151
LF E LQ +V+ F L +A++ + ++ +H M + G + L ++
Sbjct: 591 LFCEMLQSRPIPSIVD---FTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIH 647
Query: 152 TLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEP 210
C+ + A L+ K+ + +P+ + G L+ G+C EA + + M GF P
Sbjct: 648 CFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVP 707
Query: 211 SIDVVDKMIETFFKINKDDEAMKVFQMMRVK--RMDDLGLSTYRIVIDWMCKRGKISQAY 268
++ + + +I K + A++VF M K R D + TY +I + G+ + A
Sbjct: 708 NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAV---TYNTLISGLSNSGRWTDAA 764
Query: 269 TMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGL 324
+L +M KR I+ + + +++I + G L EA + +E+ + P++ Y+ LI G
Sbjct: 765 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 824
Query: 325 LRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL-GKRGRKGPDPLV----------- 372
+A +F M+ +GC P + TY L+ G KR G
Sbjct: 825 CIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDA 884
Query: 373 -NFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN----EEGVVMFE 427
++T+ + G +AGK A K R+++ GV YN L N E+ +VM E
Sbjct: 885 FTYNTL-IHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 943
Query: 428 EVGKKLREVGLADLADIFQ 446
++ K +V + I Q
Sbjct: 944 DLQKSEMDVDIITYNIIIQ 962
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 109/242 (45%), Gaps = 3/242 (1%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHI 133
+TF ++D+ K N+D E +EM + + N+ T+ + L L F +
Sbjct: 247 VTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDL 306
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGD 192
M GC ++ N ++ C+ ++V E L ++S E + Y LI GYC VG
Sbjct: 307 MASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGK 366
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
L A I+ M P I ++ + + A+ F MR + +G+ Y
Sbjct: 367 LRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMR-ESEKYIGIVAYN 425
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP 312
I+I +CK K+ +A+ + + G++ D T + +I GL G REA +++ +++
Sbjct: 426 IMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEE 485
Query: 313 DI 314
I
Sbjct: 486 GI 487
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 38/191 (19%)
Query: 66 AQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVREL 124
++ CF + +T+N ++ KS+ ++ + EM + LV D T+ + + +L
Sbjct: 842 SKGCFP-DVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKL 900
Query: 125 KKMVNFFHIMNDCGC--------------------EYSLEML---------------NKV 149
F+ M DCG E +L M+ N +
Sbjct: 901 NVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNII 960
Query: 150 VKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGF 208
++ LC+ + EA L L+ + +KP+ IAY +I G C G EA K+ M ++GF
Sbjct: 961 IQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGF 1020
Query: 209 EPSIDVVDKMI 219
PS + D+ +
Sbjct: 1021 MPSERIYDETL 1031
>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
Length = 734
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 143/305 (46%), Gaps = 19/305 (6%)
Query: 88 RNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLN 147
+ +D+F + Q +VN AL L V + + V F ++N+ G ++ + N
Sbjct: 327 KAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAE--VKFNQMINE-GVTPNIVVFN 383
Query: 148 KVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDE 206
+V LC A+ L+ + L + I PN + + LI C+VG ++E ++ +LM
Sbjct: 384 SLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHV 443
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRG 262
G P +I + + DEA KVF M +GLS TY ++ C
Sbjct: 444 GVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMV-----SIGLSPTEVTYNTLLHGYCSAS 498
Query: 263 KISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA----YKVVEEIEKPDISLYH 318
+I AY + EM ++G+ +T ++I++GL R EA ++ K DI Y+
Sbjct: 499 RIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYN 558
Query: 319 GLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIF 378
++ GL + EA ++F+ + +G + + T+ +++ G L K GRK D + F I
Sbjct: 559 IILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMI-GALLKGGRK-EDAMDLFAAIP 616
Query: 379 VGGLV 383
GLV
Sbjct: 617 ANGLV 621
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 163/382 (42%), Gaps = 26/382 (6%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
N +T+ ++D + K++ D Q+M + N+ T+ + + + K++V
Sbjct: 206 NVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQML 265
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVG 191
M+ G + ++ LC L +L L + + P+ + Y G
Sbjct: 266 EKMSARGLKPDCYTYGSLLNYLC--ALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCG 323
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTY 251
+ +A I+N M G P++ +I+ K+ + D+A F M + + +
Sbjct: 324 MIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQM-INEGVTPNIVVF 382
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE- 310
++ +C K +A ++ EM +GI + + +++I L GR+ E ++++ +E
Sbjct: 383 NSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEH 442
Query: 311 ---KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG--- 364
+PD Y LI G R EA +VF M+ G PT TY LL G+
Sbjct: 443 VGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDD 502
Query: 365 ---------RKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
RKG P +V ++TI + GL + + +A + ++N G + + YN L
Sbjct: 503 AYCLFREMLRKGVTPGVVTYNTI-LHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIIL 561
Query: 415 HYY--SN--EEGVVMFEEVGKK 432
+ SN +E MF+ + K
Sbjct: 562 NGLCKSNCVDEAFKMFQSLCSK 583
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/408 (19%), Positives = 157/408 (38%), Gaps = 74/408 (18%)
Query: 73 NSITFNRMVDIIGKSRNI----DLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMV 128
N I N+++ + + + D+ + + E+G + ++ I L ++ +
Sbjct: 132 NDIVINQLLKGLCDGKRVGEAMDVLLQRMPELGCTP--DTVSYSILLKGFCNENRAEEAL 189
Query: 129 NFFHIM-NDCG--CEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLI 184
+M ND G C ++ V+ LC+ +L A+ + ++ +KPN Y LI
Sbjct: 190 ELLRMMANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLI 249
Query: 185 KGYCDVGD--------------------------------LIEASKIWNLMTDEGFEPSI 212
GY +G L E +LM + G P
Sbjct: 250 HGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEMHSFLDLMVENGLSPDH 309
Query: 213 DVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLE 272
+ + + K D+AM +F MR + + Y +ID +CK G++ A
Sbjct: 310 HIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSP-NVVNYGALIDALCKLGRVDDAEVKFN 368
Query: 273 EMFKRGIEADNLTLSSIIYGLLARGRLREA----YKVVEEIEKPDISLYHGLIKGLLRLR 328
+M G+ + + +S++YGL + A Y+++++ P+ ++ LI L +
Sbjct: 369 QMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVG 428
Query: 329 RAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKS 388
R E ++ M G P +Y L+ G+ AG++
Sbjct: 429 RVMEGRRLIDLMEHVGVRPDAFSYTPLISGY-----------------------CLAGRT 465
Query: 389 LDAAKYVERVMNRGVEVPRFDYNKFLHYYSN----EEGVVMFEEVGKK 432
+A K + +++ G+ YN LH Y + ++ +F E+ +K
Sbjct: 466 DEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRK 513
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 148/351 (42%), Gaps = 68/351 (19%)
Query: 90 IDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKV 149
+ LF ++E + N T+ I + L + LK F ++ G + ++N++
Sbjct: 80 VSLFNRMVRECSIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQL 139
Query: 150 VKTLCQRKLVVEAKYLIL-KLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEG 207
+K LC K V EA ++L ++ E P+ ++Y L+KG+C+
Sbjct: 140 LKGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNE----------------- 182
Query: 208 FEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS------TYRIVIDWMCKR 261
N+ +EA+++ +MM +D G S TY VID +CK
Sbjct: 183 ------------------NRAEEALELLRMM----ANDHGRSCPPNVVTYTTVIDGLCKA 220
Query: 262 GKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLY 317
+A + ++M G++ +N T + +I+G L+ G+ +E +++E++ KPD Y
Sbjct: 221 QLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTY 280
Query: 318 HGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------------LGKRGR 365
L+ L L E M++ G P H + + + K +
Sbjct: 281 GSLLNYLCAL---SEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQ 337
Query: 366 KGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
G P +VN+ + + L K G+ DA +++N GV +N ++
Sbjct: 338 HGLSPNVVNYGAL-IDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVY 387
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 81/187 (43%), Gaps = 20/187 (10%)
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV--- 306
TY I+I +C+ G++ ++ + K G +++ ++ ++ GL R+ EA V+
Sbjct: 100 TYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEAMDVLLQR 159
Query: 307 --EEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIK---RGCEPTMHTYIMLLQG--- 358
E PD Y L+KG RA EA ++ R M R C P + TY ++ G
Sbjct: 160 MPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVIDGLCK 219
Query: 359 -HLGKRGR--------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFD 409
L R G P + + G + GK + + +E++ RG++ +
Sbjct: 220 AQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYT 279
Query: 410 YNKFLHY 416
Y L+Y
Sbjct: 280 YGSLLNY 286
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 82/171 (47%), Gaps = 2/171 (1%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N ++ L Q K EAK L L + + K + Y ++ G C + EA K++ +
Sbjct: 523 NTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCS 582
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKIS 265
+G + +I MI K + ++AM +F + + + TYR+V + + + G +
Sbjct: 583 KGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVP-NVVTYRLVAENLIEEGSLE 641
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISL 316
+ ++ M K G ++ L++++ LL RG + A + ++++ + S+
Sbjct: 642 EFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSV 692
>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
Length = 638
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 144/311 (46%), Gaps = 15/311 (4%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL--VNDKTFKIALM 116
FF++ K + + H++ T+ ++ + W+ +QEM R + V +
Sbjct: 109 FFRWAAKRRN-YEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSEVVR 167
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE--WIK 174
L + + K + F+ + C+ + + N ++ L + L ++S
Sbjct: 168 MLGNAKMVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCF 227
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+ + Y LI +C +G A+++ N M + G +P+ + +I FFK++ A+ +
Sbjct: 228 PDTMTYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSL 287
Query: 235 FQMMRVK--RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
F+ MR + R D + TY +I + K G+I +AY EM + G D + ++++I
Sbjct: 288 FEEMRHQYCRPD---VFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINF 344
Query: 293 LLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLR-RAREATQVFREMIKRGCEP 347
L GRL +A K+ +E+ P + Y+ +IK L + RA E F M + G P
Sbjct: 345 LGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISP 404
Query: 348 TMHTYIMLLQG 358
+ TY +L+ G
Sbjct: 405 SSFTYSILIDG 415
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 139/334 (41%), Gaps = 94/334 (28%)
Query: 171 EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDE 230
++ +P+ Y LI+G G + EA + M EG P V++ MI K + D+
Sbjct: 294 QYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLDD 353
Query: 231 AMKVFQMMRV-------------------------------KRMDDLGLS----TYRIVI 255
AMK+FQ M +RM + G+S TY I+I
Sbjct: 354 AMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILI 413
Query: 256 DWMCKRGKISQAYTMLEEMFKRG-----------IEA------------------DNLTL 286
D CK ++ +A +LEEM ++G I+A +N
Sbjct: 414 DGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGS 473
Query: 287 SSI-IYGLLAR-----GRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQV 336
SS +Y ++ + GRL +A + +E+ K PD+ Y+ L+ GL R EA
Sbjct: 474 SSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALST 533
Query: 337 FREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPD----------------PLVNFDTIFVG 380
R M + GC P +++Y ++L G L K G GP +V+++T+ +G
Sbjct: 534 MRRMQEHGCIPDINSYNIILNG-LAKTG--GPHRAMEMLSNMKQSTVRPDVVSYNTV-LG 589
Query: 381 GLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
L AG +AAK +E + G E Y+ L
Sbjct: 590 ALSHAGMFEEAAKLMEEMNTLGFEYDLITYSSIL 623
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 84/224 (37%), Gaps = 40/224 (17%)
Query: 68 PCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRR-RLVNDKTFKIALMTLAEVRELKK 126
PC A + ++D +GK++ DL E QE+ + + + + + L + L
Sbjct: 439 PCPA----AYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDD 494
Query: 127 MVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKG 186
+N F MN GC P+ AY L+ G
Sbjct: 495 AINMFDEMNKLGC----------------------------------APDVYAYNALMSG 520
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
G L EA M + G P I+ + ++ K AM++ M+ +
Sbjct: 521 LARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRP- 579
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
+ +Y V+ + G +A ++EEM G E D +T SSI+
Sbjct: 580 DVVSYNTVLGALSHAGMFEEAAKLMEEMNTLGFEYDLITYSSIL 623
>gi|302792409|ref|XP_002977970.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
gi|300153991|gb|EFJ20627.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
Length = 695
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 100/411 (24%), Positives = 179/411 (43%), Gaps = 40/411 (9%)
Query: 22 PESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMV 81
P + L+++L SC +C L+ YL + Q C A N +++N ++
Sbjct: 8 PNAILYNNLISC-----------LCKAGMLAEAESYL----KRMPQHC-APNVVSYNIII 51
Query: 82 DIIGKSRNID---LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCG 138
D K+RNI+ F ++E+G + + + + + K ++ F M G
Sbjct: 52 DGYCKARNIEKALAFLREMEELGHPP--TPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKG 109
Query: 139 CEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEAS 197
CE + N ++ L + + + EA+ L + S KP+ + Y +I G C L EA
Sbjct: 110 CEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAV 169
Query: 198 KIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDW 257
+ M E P+ +I+ K + +A +VF+ M + Y ++ +
Sbjct: 170 FLLERMKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKM-AEGPCACTEPAYSVLFNK 228
Query: 258 MCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL--LARGRLREAYKVVEEIEK---P 312
+ + GK+ +A + +M ++ + + T S ++ GL + G + A V E + K P
Sbjct: 229 LQRAGKLVEASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAP 288
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLV 372
D Y LI GL + RR EA ++F+EM RG PT+ TY LL+G L + L
Sbjct: 289 DFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELT 348
Query: 373 NF--------DT----IFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
F DT + + G G + +A + ++ G+ + + YN
Sbjct: 349 YFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYN 399
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 132/323 (40%), Gaps = 53/323 (16%)
Query: 145 MLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
+ N ++ LC+ ++ EA+ + ++ + PN ++Y +I GYC ++ +A M
Sbjct: 12 LYNNLISCLCKAGMLAEAESYLKRMPQHCAPNVVSYNIIIDGYCKARNIEKALAFLREME 71
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
+ G P+ ++++F K +AM VF M K + + + +++ + + KI
Sbjct: 72 ELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEP-DIVNFNVLLSGLWRARKI 130
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDIS----LYHGL 320
+A + M RG + D +T +++I GL +L EA ++E +++ D+S Y L
Sbjct: 131 HEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTL 190
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ-----GHLGKRGRKGPD------ 369
I L + R ++A +VF +M + C T Y +L G L + R D
Sbjct: 191 IDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSDMCRKNV 250
Query: 370 -------------------------------------PLVNFDTIFVGGLVKAGKSLDAA 392
P +I + GL KA + +A
Sbjct: 251 CMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYSILINGLCKARRPGEAK 310
Query: 393 KYVERVMNRGVEVPRFDYNKFLH 415
+ + + RG+ YN L
Sbjct: 311 EMFQEMRGRGISPTVVTYNTLLE 333
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 160/374 (42%), Gaps = 63/374 (16%)
Query: 87 SRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEML 146
S+ +D+F E + +VN F + L L R++ + F MN GC+ +
Sbjct: 96 SKAMDVFAEMPAKGCEPDIVN---FNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTY 152
Query: 147 NKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCD---------------- 189
N ++ LC+ K + EA +L+ ++ E + P + Y LI C
Sbjct: 153 NTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAE 212
Query: 190 -------------------VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD- 229
G L+EAS++++ M + + + ++ K++ +
Sbjct: 213 GPCACTEPAYSVLFNKLQRAGKLVEASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNV 272
Query: 230 EAMK-VFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
EA K V +MM K D Y I+I+ +CK + +A M +EM RGI +T ++
Sbjct: 273 EAAKLVTEMMGKKIAPDF--YAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNT 330
Query: 289 IIYGLLARGRLREA----YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
++ GLL+ +L++A Y ++++ PD Y+ +I+G EA +F++MIK G
Sbjct: 331 LLEGLLSTAKLQDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDG 390
Query: 345 CEPTMHTYIMLLQGH-----------LGKRGRKG-----PDPLVNFDTIFVGGLVKAGKS 388
TY ++ G L KR + G P P + I + L K +
Sbjct: 391 IVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQV 450
Query: 389 LDAAKYVERVMNRG 402
+A K + + ++G
Sbjct: 451 EEAFKLLSAMRDKG 464
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 121/268 (45%), Gaps = 10/268 (3%)
Query: 100 MGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLV 159
MG++ + + I + L + R + F M G ++ N +++ L +
Sbjct: 282 MGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKL 341
Query: 160 VEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKM 218
+A L L + P+ +Y +I+G+C GD EA ++ M +G + + M
Sbjct: 342 QDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFM 401
Query: 219 IETFFKINKDDEAMKVFQMMRVKRMDDL---GLSTYRIVIDWMCKRGKISQAYTMLEEMF 275
I F K A +F+ M+ + D + + TY I+I +CK ++ +A+ +L M
Sbjct: 402 IVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMR 461
Query: 276 KRGIEADNLTLSSIIYGLLAR-GRLREAYKVVEEIEKPDISLYHG----LIKGLLRLRRA 330
+G +L + ++ LAR GRL +A+++ +E+ + + G L+ G+LR
Sbjct: 462 DKGF-VPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSV 520
Query: 331 REATQVFREMIKRGCEPTMHTYIMLLQG 358
EA ++M G P TY L+ G
Sbjct: 521 DEAKDFLKQMTDTGIVPDKFTYDKLVVG 548
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 73/136 (53%), Gaps = 3/136 (2%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
PN Y LI C + EA K+ + M D+GF PS+ + + ++ + + D+A ++
Sbjct: 432 PNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFEL 491
Query: 235 F-QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
+ +M R+ +G S I++D + +RG + +A L++M GI D T ++ GL
Sbjct: 492 YKEMSRINCQQLVGSSN--ILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGL 549
Query: 294 LARGRLREAYKVVEEI 309
+G+ +A K+VEE+
Sbjct: 550 CWQGKADQARKLVEEL 565
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/300 (20%), Positives = 122/300 (40%), Gaps = 70/300 (23%)
Query: 160 VEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKM 218
VEA L+ ++ + I P+ AY LI G C EA +++ M G P++ + +
Sbjct: 272 VEAAKLVTEMMGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTL 331
Query: 219 IETFFKINKDDEAMKV-FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKR 277
+E K +AM++ + M+ R+ D +Y ++I C G ++AY + ++M K
Sbjct: 332 LEGLLSTAKLQDAMELTYFMLDQGRLPDT--CSYNLMIRGFCANGDTNEAYCLFQDMIKD 389
Query: 278 GIEADNLTLSSIIYG---------------------------------------LLARGR 298
GI + T + +I G L +
Sbjct: 390 GIVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQ 449
Query: 299 LREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIM 354
+ EA+K++ + P + ++ L+ L R R +A ++++EM + C+
Sbjct: 450 VEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQ-------- 501
Query: 355 LLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
LV I + G+++ G +A +++++ + G+ +F Y+K +
Sbjct: 502 ---------------QLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLV 546
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 112/226 (49%), Gaps = 6/226 (2%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEA 196
GC+ L VV LC+R A L+ K+ + ++P + Y +I G C + +A
Sbjct: 11 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 70
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVID 256
++ M +G P++ +I + +A ++ M ++R + + T+ +ID
Sbjct: 71 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM-IERKINPDVFTFSALID 129
Query: 257 WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----P 312
K GK+ +A + +EM KR I+ +T SS+I G RL EA ++ E + P
Sbjct: 130 AFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP 189
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
D+ Y+ LIKG + +R E +VFREM +RG TY +L+QG
Sbjct: 190 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG 235
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 160/365 (43%), Gaps = 34/365 (9%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+T+ +V+ + K + DL + L +M + +L + + L + + + +N F
Sbjct: 17 VTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKE 76
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGD 192
M G ++ + ++ LC +A L+ + E I P+ + LI + G
Sbjct: 77 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 136
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
L+EA K+++ M +PSI +I F ++ DEA ++F+ M V + + TY
Sbjct: 137 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM-VSKHCFPDVVTYN 195
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK- 311
+I CK ++ + + EM +RG+ + +T + +I GL G A ++ +E+
Sbjct: 196 TLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD 255
Query: 312 ---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGP 368
P+I Y+ L+ GL + + +A VF + + EPT++TY
Sbjct: 256 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY---------------- 299
Query: 369 DPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY----SNEEGVV 424
I + G+ KAGK D + +GV+ YN + + S EE
Sbjct: 300 -------NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADA 352
Query: 425 MFEEV 429
+F+E+
Sbjct: 353 LFKEM 357
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 106/204 (51%), Gaps = 8/204 (3%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N ++K C+ K V E + ++S+ + N + Y LI+G GD A +I+ M
Sbjct: 195 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS 254
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKIS 265
+G P+I + +++ K K ++AM VF+ ++ +M+ + TY I+I+ MCK GK+
Sbjct: 255 DGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT-IYTYNIMIEGMCKAGKVE 313
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLI 321
+ + + +G++ D + +++I G +G EA + +E+++ P+ Y+ LI
Sbjct: 314 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 373
Query: 322 KGLLRLRRAREATQVFREMIKRGC 345
+ LR + ++ +EM R C
Sbjct: 374 RARLRDGDREASAELIKEM--RSC 395
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 86/180 (47%), Gaps = 2/180 (1%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAE 120
+ + +Q N++T+N ++ + ++ + D+ E +EM + N T+ L L +
Sbjct: 214 FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 273
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIA 179
+L+K + F + E ++ N +++ +C+ V + L LS + +KP+ +A
Sbjct: 274 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVA 333
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
Y +I G+C G EA ++ M ++G P+ + +I + + + ++ + MR
Sbjct: 334 YNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 393
>gi|224130680|ref|XP_002320901.1| predicted protein [Populus trichocarpa]
gi|222861674|gb|EEE99216.1| predicted protein [Populus trichocarpa]
Length = 475
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 155/367 (42%), Gaps = 57/367 (15%)
Query: 60 FQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTL 118
F Y + QP F H+ ++ ++ +G+++ + L ++ + V F +
Sbjct: 87 FDYASR-QPNFQHSYSSYLILILKLGRAKYFSFIDDLLTDLKSKNYPVTPTLFSYIINIY 145
Query: 119 AEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW--IKPN 176
E K + F+ + C S + LN +++ L + ++ + + K + + PN
Sbjct: 146 GEANLPDKALKIFYTILKFDCNPSPKHLNGILEILVSHQNYIKPAFDLFKDAHTYDVFPN 205
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
+Y LI+ +C G + A ++N Q
Sbjct: 206 TKSYNILIRAFCLNGQISMAYSLFN----------------------------------Q 231
Query: 237 MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR 296
M + M D+ +YRI++ +C++ +++ A +LE+M +G D L+ ++++ L +
Sbjct: 232 MFKRDVMPDV--ESYRILMQALCRKSQVNGAVDLLEDMLNKGYVPDALSYTTLLNSLCRK 289
Query: 297 GRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
+LREAYK++ ++ PDI Y+ +I G R RA +A +V +M GC P + +Y
Sbjct: 290 KKLREAYKLLCRMKVKGCNPDIIHYNTVILGFCREGRAMDACKVLEDMESNGCMPNLVSY 349
Query: 353 IMLLQG------------HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMN 400
L+ G HL + KG P + G GK +A VE ++
Sbjct: 350 RTLVGGLCDQGMFDEAKSHLEEMMMKGFSPHFAVSNALIKGFCNVGKIEEACGVVEELLK 409
Query: 401 RGVEVPR 407
G E P
Sbjct: 410 HG-EAPH 415
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 118/248 (47%), Gaps = 45/248 (18%)
Query: 159 VVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDK 217
++EAK L ++ + I P+ I Y LI G+C L EA+++ +LM +G EP+I
Sbjct: 330 LLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSI 389
Query: 218 MIETFFKINKDDEAMKVFQMMRVKRM--DDLGLSTYRIVIDWMCKRGKISQAYTMLEEMF 275
+I ++ K + D M++F + K + D + TY ++ C+ GK++ A + +EM
Sbjct: 390 LINSYCKAKRVDNGMRLFCEISSKGLVADTV---TYNTLVQGFCQSGKLNVAKELFQEMV 446
Query: 276 KRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK------------------------ 311
RG+ +T ++ GL G L++A ++ E+++K
Sbjct: 447 SRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVD 506
Query: 312 ---------------PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
PD+ Y+ +I GL + EA +FR+M + GC P+ TY +L+
Sbjct: 507 DAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILI 566
Query: 357 QGHLGKRG 364
+ HLG G
Sbjct: 567 RAHLGGSG 574
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 172/406 (42%), Gaps = 60/406 (14%)
Query: 68 PCFAHNSITF-----NRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVR 122
C + +++ N +VDI + IDLF +Q L++ F +A +
Sbjct: 28 SCISEAKVSYKERLRNGIVDI-KVNEAIDLFESMIQSRPLPSLID---FSKLFSAVARRK 83
Query: 123 ELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLC-QRKLVVEAKYLILKLSEWIKPNEIAYG 181
E ++ F M+ G E+++ +N ++ C +RKL+ + L +PN I +
Sbjct: 84 EYDLVLGFCKEMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFS 143
Query: 182 WLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM--- 238
LI G+C G + EA + + M + + P++ V+ +I + EA+ + M
Sbjct: 144 TLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKY 203
Query: 239 --------------RVKRMDDLGLS-----------------TYRIVIDWMCKRGKISQA 267
R+ + + L+ Y IVID +CK G + A
Sbjct: 204 GCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDA 263
Query: 268 YTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKG 323
++ EM +GI+AD + SSII GL GR + K++ E+ P++ + LI
Sbjct: 264 LSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDV 323
Query: 324 LLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG-----HLGKRGR-------KGPDPL 371
++ + EA +++ EM+ RG P TY L+ G LG+ + KG +P
Sbjct: 324 FVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPN 383
Query: 372 VNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
+ +I + KA + + + + ++G+ YN + +
Sbjct: 384 IVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGF 429
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 127/283 (44%), Gaps = 3/283 (1%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAE 120
Y + A ++IT++ ++D K + + L M + N T+ I + + +
Sbjct: 337 YNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCK 396
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIA 179
+ + + F ++ G N +V+ CQ + AK L ++ S + P+ +
Sbjct: 397 AKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVT 456
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
YG L+ G CD G+L +A +I+ M I + + +I +K D+A +F +
Sbjct: 457 YGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLS 516
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
VK + L TY ++I +CK+G +S+A + +M + G + T + +I L +
Sbjct: 517 VKGVKPDVL-TYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGV 575
Query: 300 REAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIK 342
+ +++EE++ + IK ++ + + F +M+
Sbjct: 576 ISSVELIEEMKMRGFAADASTIKMVVVMLSDGRLDKTFLDMLS 618
>gi|255660832|gb|ACU25585.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
gi|410109881|gb|AFV61020.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
virgata]
Length = 418
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 134/287 (46%), Gaps = 39/287 (13%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T + L L +++ K + F+ + DCG SL N ++ C+ + A+ + +
Sbjct: 103 TCRKVLEHLMKLKYFKLVWGFYEEILDCGYPASLYFFNILMHRFCKEGDIRVAQLVFNAI 162
Query: 170 SEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++W ++P+ +++ L+ GY +GDL E ++ + M G +P + +I K +K
Sbjct: 163 TKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKM 222
Query: 229 DEAMKVFQMMRVK-------------------RMDDLG---------------LSTYRIV 254
D+A +F M K R DL L TY +
Sbjct: 223 DDANGLFDEMLDKGLVPNGVTFTTLIAGHCKNRRVDLAMEIYKQMLSQSLSPDLITYNTL 282
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY----KVVEEIE 310
I +CK+G + QA+ +++EM +G++ D +T +++I G G L A+ ++++E
Sbjct: 283 IYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENI 342
Query: 311 KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
+ D Y LI GL + R +A +V REM+ G +P TY M++
Sbjct: 343 RLDDVAYTALISGLCQEGRYLDAEKVLREMLSVGLKPDTGTYTMIIN 389
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 86/208 (41%), Gaps = 38/208 (18%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
N +TF ++ K+R +DL E ++M + L D
Sbjct: 240 NGVTFTTLIAGHCKNRRVDLAMEIYKQMLSQSLSPD------------------------ 275
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVG 191
L N ++ LC++ + +A LI ++S + +KP++I Y LI G C G
Sbjct: 276 ----------LITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEG 325
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLST 250
DL A + M E +I + + +A KV +M+ V D G T
Sbjct: 326 DLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSVGLKPDTG--T 383
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRG 278
Y ++I+ CK+G + +L+EM + G
Sbjct: 384 YTMIINEFCKKGDVWTGSKLLKEMQRDG 411
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 126/266 (47%), Gaps = 9/266 (3%)
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLIL-KLSEWIKPNEIAYGWLIKGYCDVGD 192
M + GC ++ N V+ LC+ V +A +L+ +++ P+ Y LI GYC
Sbjct: 391 MAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLK 450
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
L A+++ N M +G P + + ++ K K +E M++F+ M K + TY
Sbjct: 451 LDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTP-NIITYN 509
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP 312
I++D +CK K+++A +L EM +G++ D ++ ++ G G + AY++ +EK
Sbjct: 510 IIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQ 569
Query: 313 -----DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG--HLGKRGR 365
+ Y+ ++ A ++F M GC+P +TY +++ G +G +
Sbjct: 570 YDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQ 629
Query: 366 KGPDPLVNFDTIFVGGLVKAGKSLDA 391
L N + F+ L G+ L+
Sbjct: 630 GYKFLLENMEKRFIPSLTTFGRVLNC 655
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 165/390 (42%), Gaps = 81/390 (20%)
Query: 69 CFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGR--RRLVNDKTFKIALMTLAEVRELKK 126
C + + FN++V ++ K L +E+ + +G+ +R V F + RE
Sbjct: 211 CLCPDVVAFNKLVHVLCKK---GLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCRE--- 264
Query: 127 MVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKG 186
L++ V+ ++V +YL ++ +P+++ Y +I G
Sbjct: 265 -----------------GALDRAVR---NSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDG 304
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ---------- 236
YC G + +A+++ +GF+P +I F K D AM VF+
Sbjct: 305 YCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPS 364
Query: 237 ----MMRVKRMDDLGLS--------------------TYRIVIDWMCKRGKISQAYTMLE 272
+K + GL TY +VI+ +CK G +S A +++
Sbjct: 365 IVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVD 424
Query: 273 EMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLR 328
+ +G D T +++I G + +L A ++V + PD+ Y+ L+ GL +
Sbjct: 425 DAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAG 484
Query: 329 RAREATQVFREMIKRGCEPTMHTYIMLLQG------------HLGKRGRKGPDP-LVNFD 375
++ E ++F+ M ++GC P + TY +++ LG+ KG P +V+F
Sbjct: 485 KSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFG 544
Query: 376 TIFVGGLVKAGKSLDAAKYVERVMNRGVEV 405
T+F G K G +D A + R M + +V
Sbjct: 545 TLFT-GFCKIG-DIDGAYQLFRRMEKQYDV 572
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 141/310 (45%), Gaps = 32/310 (10%)
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYC 188
F ++ C C + NK+V LC++ LV E++ L+ K L + PN + ++G C
Sbjct: 204 FDEMLARCLCP-DVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLC 262
Query: 189 DVGDL---------IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
G L +EA + M + GFEP + +I+ + K +A +V +
Sbjct: 263 REGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAV 322
Query: 240 VK--RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
K + D+ TY +I+ CK G +A + ++ +G+ + +++I GL +G
Sbjct: 323 FKGFKPDEF---TYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQG 379
Query: 298 RLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYI 353
+ A +++ E+ + P+I Y+ +I GL ++ +A+ + + I +GC P + TY
Sbjct: 380 LILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYN 439
Query: 354 MLLQGH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNR 401
L+ G+ + + +G P V + GL KAGKS + + + + +
Sbjct: 440 TLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEK 499
Query: 402 GVEVPRFDYN 411
G YN
Sbjct: 500 GCTPNIITYN 509
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 147/312 (47%), Gaps = 27/312 (8%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIM 134
T+N ++D K +D E + M + + D T+ L L + + ++++ F M
Sbjct: 437 TYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAM 496
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDL 193
+ GC ++ N +V +LC+ K V EA L+ ++ S+ +KP+ +++G L G+C +GD+
Sbjct: 497 EEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDI 556
Query: 194 IEASKIWNLMTDEGFEPSIDVV------DKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
A +++ M E DV + ++ F + + AMK+F +M+ D
Sbjct: 557 DGAYQLFRRM-----EKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDN 611
Query: 248 LSTYRIVIDWMCKRGKISQAYT-MLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
TYR+VID CK G I+Q Y +LE M KR I + T ++ L + ++ EA ++
Sbjct: 612 Y-TYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLT-TFGRVLNCLCVKDKVHEAVGII 669
Query: 307 EEIEKPDISLYHGLIKGLLRL-----RRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG 361
+ L G++ + ++ A ++ E + + +TY +L G
Sbjct: 670 H------LMLQKGIVPETVNTIFEADKKVVAAPKILVEDLLKKGHIAYYTYELLYDGIRD 723
Query: 362 KRGRKGPDPLVN 373
K+ K P VN
Sbjct: 724 KKILKKRLPTVN 735
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 135/314 (42%), Gaps = 29/314 (9%)
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGD 192
M D G + + +K+ C+ A L+ + E N +AY ++ G D G+
Sbjct: 137 MRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGE 196
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
A ++++ M P + +K++ K E+ ++ + +KR L T+
Sbjct: 197 HDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKV-LKRGVCPNLFTFN 255
Query: 253 IVIDWMCKRG---------KISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
I + +C+ G ++ +A L +M G E D+LT +SII G +G +++A
Sbjct: 256 IFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDAN 315
Query: 304 KVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
+V+++ KPD Y LI G + A VF++ + +G P++ Y L++G
Sbjct: 316 RVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKG- 374
Query: 360 LGKRG-------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
L ++G G P + + + GL K G DA+ V+ + +G
Sbjct: 375 LSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPD 434
Query: 407 RFDYNKFLHYYSNE 420
F YN + Y +
Sbjct: 435 IFTYNTLIDGYCKQ 448
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/311 (20%), Positives = 136/311 (43%), Gaps = 21/311 (6%)
Query: 113 IALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW 172
+A + + LK + F ++ G +++ +V+ L E + L+ ++ E
Sbjct: 10 VAAVVKIQTDPLKALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMREN 69
Query: 173 IKPN--EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDE 230
+ E AY +K Y G + EA + M +PS+ + ++ + ++
Sbjct: 70 VNNALLEGAYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQ 129
Query: 231 AMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
A KV+ MR + + + TY I I CK + A +L M + G +++ + +++
Sbjct: 130 AHKVYMRMRDRGVQS-DVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVV 188
Query: 291 YGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
GL G A ++ +E+ PD+ ++ L+ L + E+ ++ +++KRG
Sbjct: 189 AGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVC 248
Query: 347 PTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
P + T+ + +QG L + G + V+ + ++A +Y+ +++N G E
Sbjct: 249 PNLFTFNIFVQG-LCREGA-------------LDRAVRNSRVVEAEEYLRKMVNGGFEPD 294
Query: 407 RFDYNKFLHYY 417
YN + Y
Sbjct: 295 DLTYNSIIDGY 305
>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 178/391 (45%), Gaps = 26/391 (6%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVN---DKTFKIALMTLAEVRELKK 126
F H T+ +++ +G + E L +M R+ + N + + A+ ++++
Sbjct: 36 FKHTLSTYRSIIEKLGLYGKFEAMEEVLVDM-RQNVGNHMLEGVYVGAMKNYGRKGKVQE 94
Query: 127 MVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIK 185
VN F M+ CE ++ N ++ L +A + +++ + I P+ ++ +K
Sbjct: 95 AVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMK 154
Query: 186 GYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD 245
+C A ++ N M+ +G E ++ ++ F++ N DE ++F M +
Sbjct: 155 SFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVS- 213
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
L LST+ ++ +CK+G + + +L+++ KRG+ + T + I GL +G L A ++
Sbjct: 214 LCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRM 273
Query: 306 V----EEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL- 360
V ++ KPD+ Y+ LI GL + + +EA +++ G EP TY L+ G+
Sbjct: 274 VGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCK 333
Query: 361 GKRGRKGPDPLVNFDTIFVG-------------GLVKAGKSLDAAKYVERVMNRGVEVPR 407
G + LVN +F G GL G++ A + +G++
Sbjct: 334 GGMVQLAERILVN--AVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNV 391
Query: 408 FDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
YN + SN+ ++ ++ ++ E GL
Sbjct: 392 ILYNTLIKGLSNQGLILEAAQLASEMSEKGL 422
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 91/409 (22%), Positives = 176/409 (43%), Gaps = 57/409 (13%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRR-LVNDKTFKIALMTLAEVRELKKMVNFFHIM 134
TFN+++ ++ K ++ + L ++ +R L N T+ + L + EL V +
Sbjct: 218 TFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRL 277
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDL 193
D G + + N ++ LC+ EA+ + KL +E ++P+ Y LI GYC G +
Sbjct: 278 IDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMV 337
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ--------------MMR 239
A +I GF P +I+ + + A+ +F
Sbjct: 338 QLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTL 397
Query: 240 VKRMDDLGL--------------------STYRIVIDWMCKRGKISQAYTMLEEMFKRGI 279
+K + + GL T+ I+++ +CK G +S A +++ M +G
Sbjct: 398 IKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGY 457
Query: 280 EADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQ 335
D T + +I+G + ++ A ++++ + PD+ Y+ L+ GL + + + +
Sbjct: 458 FPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVME 517
Query: 336 VFREMIKRGCEPTMHTYIMLLQ------------GHLGKRGRKGPDP-LVNFDTIFVGGL 382
++ M+++GC P + T+ +LL+ G L + K +P V F T+ + G
Sbjct: 518 TYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTL-IDGF 576
Query: 383 VKAGKSLDAAKYVERVMNR--GVEVPRFDYNKFLHYYSNEEGVVMFEEV 429
K G LD A + R M V YN +H ++ + V M E++
Sbjct: 577 CKNG-DLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKL 624
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 140/299 (46%), Gaps = 14/299 (4%)
Query: 70 FAHNSITFNRMVDIIG----KSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELK 125
F + T+ ++D + +R + LF E L + + ++ T L + E
Sbjct: 352 FVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAA 411
Query: 126 KMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLI 184
++ + M++ G ++ N +V LC+ V +A L+ + +S+ P+ + LI
Sbjct: 412 QLAS---EMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 468
Query: 185 KGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD 244
GY + A +I ++M D G +P + + ++ K +K ++ M+ ++ M V++
Sbjct: 469 HGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTM-VEKGC 527
Query: 245 DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK 304
L T+ I+++ +C+ K+ +A +LEEM + + D +T ++I G G L AY
Sbjct: 528 APNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYT 587
Query: 305 VVEEIEKP-----DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+ ++E+ Y+ +I A ++F+EM+ R P +TY +++ G
Sbjct: 588 LFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDG 646
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 100/245 (40%), Gaps = 9/245 (3%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKL---VVEAKYLI 166
TF I + + +++ + +M D G + + N ++ LC+ V+E +
Sbjct: 463 TFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTM 522
Query: 167 LKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKIN 226
++ + PN + L++ C L +A + M ++ P +I+ F K
Sbjct: 523 VE--KGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNG 580
Query: 227 KDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTL 286
D A +F+ M M TY I+I ++ ++ A + +EM R + D T
Sbjct: 581 DLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTY 640
Query: 287 SSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIK 342
++ G G + YK + E+ + P ++ +I L R EA + M++
Sbjct: 641 RLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQ 700
Query: 343 RGCEP 347
+G P
Sbjct: 701 KGLVP 705
>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 775
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 158/360 (43%), Gaps = 25/360 (6%)
Query: 73 NSITFNRMVDIIGKSR--NIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVN 129
N +++N + I+G R NI+ + +EM N TF I + + +++ +
Sbjct: 401 NVVSYNNI--ILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFS 458
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYC 188
FH M D + L ++K LC+ E + L K +S+ P + Y +I G+
Sbjct: 459 IFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFI 518
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
G++ AS ++ M + G PS +I+ F K N D A+K+ M+ K + + +
Sbjct: 519 KEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLK-MDI 577
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY----K 304
Y +ID CKR + A+ +L E+ G+ + +S+I G + EA K
Sbjct: 578 KAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKK 637
Query: 305 VVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
+V E D+ Y LI GLL+ R A+ + EM+ +G P + +L+ G L +G
Sbjct: 638 MVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLING-LCNKG 696
Query: 365 R-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
+ K P V + G K G +A + + +++RG+ Y+
Sbjct: 697 QFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYD 756
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 96/191 (50%), Gaps = 5/191 (2%)
Query: 179 AYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
AYG LI G+C D+ A ++ N + G P+ + + MI F +N +EA+ +++ M
Sbjct: 579 AYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKM 638
Query: 239 RVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR 298
V L TY +ID + K G++ A + EM +GI D+ + +I GL +G+
Sbjct: 639 -VNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQ 697
Query: 299 LREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIM 354
A K++E++ P + +Y+ LI G + +EA ++ EM+ RG P TY +
Sbjct: 698 FENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDI 757
Query: 355 LLQGHLGKRGR 365
L+ G G
Sbjct: 758 LVNGKFKGDGN 768
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 139/311 (44%), Gaps = 30/311 (9%)
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M +CG +L + ++K C + + A L+ ++SE + PN++ Y LI G C G+
Sbjct: 254 MVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGN 313
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ +A + ++ M +G S+ ++ ++E + K A +F + ++ T+
Sbjct: 314 IEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANV--FTFN 371
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
++ W+CK GK+++A + +E+ +GI + ++ ++II G + + A KV +E+
Sbjct: 372 TLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDN 431
Query: 311 --KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGP 368
P+ + L+ G + A +F M PT T LG
Sbjct: 432 GFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTT--------LG------- 476
Query: 369 DPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEE 428
I + GL KAG+S + + +++G YN + + E + +
Sbjct: 477 --------IIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASN 528
Query: 429 VGKKLREVGLA 439
V +++ EVG+
Sbjct: 529 VYREMCEVGIT 539
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 139/317 (43%), Gaps = 28/317 (8%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRE----LKKMV 128
N +T++ ++D K+ NI+ +E EM K + ++ +L + E +
Sbjct: 297 NKVTYSVLIDGCCKNGNIEKAFEFYSEM------KTKGIRSSVYSLNSILEGYLKCQSWQ 350
Query: 129 NFFHIMNDCGCEYSLE---MLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLI 184
N F + ND E L N ++ LC+ + EA L + +++ I PN ++Y +I
Sbjct: 351 NAFTMFND-ALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNII 409
Query: 185 KGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD 244
G+C ++ A K++ M D GF P+ +++ +FK + A +F RM
Sbjct: 410 LGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFH-----RMK 464
Query: 245 DLGL----STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
D + +T I+I +CK G+ + + + +G + ++II G + G +
Sbjct: 465 DANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNIN 524
Query: 301 EAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
A V E+ + P Y LI G + A ++ +M ++G + + Y L+
Sbjct: 525 LASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLI 584
Query: 357 QGHLGKRGRKGPDPLVN 373
G +R K L+N
Sbjct: 585 DGFCKRRDMKSAHELLN 601
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/269 (20%), Positives = 112/269 (41%), Gaps = 44/269 (16%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEV 121
Y + + +++T+ ++D K NIDL + L +M R+
Sbjct: 530 YREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRK------------------ 571
Query: 122 RELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAY 180
G + ++ ++ C+R+ + A L+ +L + PN Y
Sbjct: 572 ----------------GLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIY 615
Query: 181 GWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
+I G+ ++ ++ EA ++ M +EG + +I+ K + A + M
Sbjct: 616 NSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLS 675
Query: 241 KRM--DDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR 298
K + DD + ++I+ +C +G+ A +LE+M + + L +++I G G
Sbjct: 676 KGILPDD---RAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGN 732
Query: 299 LREAYKVVEEIEK----PDISLYHGLIKG 323
L+EA+++ +E+ PD Y L+ G
Sbjct: 733 LQEAFRLHDEMLDRGLVPDNITYDILVNG 761
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/303 (20%), Positives = 126/303 (41%), Gaps = 34/303 (11%)
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFK-INKDDEAMKV 234
++ A G ++ C + L+E +K++N D ++ ++ + + D EA +
Sbjct: 139 DQFASGKSVRFSCLMDRLVECTKLYNFPLDIQEGNILEAEQHFLQAKARGVELDQEAYSI 198
Query: 235 F-QMMRVKRMDDLGLS---------------TYRIVIDWMCKRGKISQAYTMLEEMFKRG 278
F ++ +K LS T+ VI K G +++A + ++M G
Sbjct: 199 FVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCG 258
Query: 279 IEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREAT 334
+ +S++ G +G LR A +V EI + P+ Y LI G + +A
Sbjct: 259 KSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAF 318
Query: 335 QVFREMIKRGCEPTMHTYIMLLQGHLGKRG------------RKGPDPLVNFDTIFVGGL 382
+ + EM +G ++++ +L+G+L + G + F+T+ + L
Sbjct: 319 EFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTL-LSWL 377
Query: 383 VKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLA 442
K GK +A + V+ +G+ YN + + ++ + +V K++ + G A
Sbjct: 378 CKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNA 437
Query: 443 DIF 445
F
Sbjct: 438 VTF 440
>gi|255577348|ref|XP_002529554.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530966|gb|EEF32823.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 678
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 144/296 (48%), Gaps = 17/296 (5%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVN-DKTFKIALMTLAEVRELKKMVNFFHIM 134
T+ +V+ + + ++D ++ M + V+ + + I L L +++N M
Sbjct: 383 TYKVLVEALCQEMDLDKARRIVEAMLNKDGVDRTRIYNIYLRALCLTNSATELLNVLVSM 442
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI--LKLSEWIKPNEIAYGWLIKGYCDVGD 192
C+ + LN VV C+ + EA ++ + + ++ P+ + + +I G + G
Sbjct: 443 LQTECQPDVITLNTVVNGFCKMHRIEEALTILTDMTMGKFCAPDAVTFTTIIAGLLNAGR 502
Query: 193 LIEA-SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS-- 249
EA + ++ +M ++G P ++ + +I FK+ +EAM+ F KRM G++
Sbjct: 503 SQEALNLLYKVMHEKGISPGVETYNAVIHGLFKLQLAEEAMRAF-----KRMLAAGVAAD 557
Query: 250 --TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA----Y 303
TY ++ID +C+ G I +A + +++ D+ +SI+ GL G+L EA Y
Sbjct: 558 SKTYTLIIDGLCESGLIDKAKKLWDDVIWPSRIHDDFVYASILKGLCRAGKLDEACHFLY 617
Query: 304 KVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
++V+ P+I Y+ +I +L REA QV EM K G P T+ +L + H
Sbjct: 618 ELVDSGVSPNIISYNIVIDSACKLGMKREAYQVVTEMRKNGLTPDAVTWRILDKLH 673
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 165/361 (45%), Gaps = 25/361 (6%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKK--MVNF 130
N+ F ++D + + ++ ++ ++M + + VN + F A M + R K
Sbjct: 275 NAAAFVNVIDSLCREGFLNDVFKIAEDMPQGKSVNQE-FAYAHMIDSLCRAGKNHGASRI 333
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCD 189
++M G SL N ++ LC+ + + A L + E+ P+E Y L++ C
Sbjct: 334 VYMMKKKGLTPSLVSYNSIIHGLCKERGCMRAYQLFEEGIEFGYLPSEYTYKVLVEALCQ 393
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGL 248
DL +A +I M ++ + + + N E + V M++ + D+
Sbjct: 394 EMDLDKARRIVEAMLNKDGVDRTRIYNIYLRALCLTNSATELLNVLVSMLQTECQPDV-- 451
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEM-FKRGIEADNLTLSSIIYGLLARGRLREA----Y 303
T V++ CK +I +A T+L +M + D +T ++II GLL GR +EA Y
Sbjct: 452 ITLNTVVNGFCKMHRIEEALTILTDMTMGKFCAPDAVTFTTIIAGLLNAGRSQEALNLLY 511
Query: 304 KVVEEIE-KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG---- 358
KV+ E P + Y+ +I GL +L+ A EA + F+ M+ G TY +++ G
Sbjct: 512 KVMHEKGISPGVETYNAVIHGLFKLQLAEEAMRAFKRMLAAGVAADSKTYTLIIDGLCES 571
Query: 359 HLGKRGRKGPDPLV-----NFDTIFVG---GLVKAGKSLDAAKYVERVMNRGVEVPRFDY 410
L + +K D ++ + D ++ GL +AGK +A ++ +++ GV Y
Sbjct: 572 GLIDKAKKLWDDVIWPSRIHDDFVYASILKGLCRAGKLDEACHFLYELVDSGVSPNIISY 631
Query: 411 N 411
N
Sbjct: 632 N 632
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 126/292 (43%), Gaps = 9/292 (3%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQE-MGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHI 133
+++N ++ + K R ++ +E + L ++ T+K+ + L + +L K
Sbjct: 347 VSYNSIIHGLCKERGCMRAYQLFEEGIEFGYLPSEYTYKVLVEALCQEMDLDKARRIVEA 406
Query: 134 M-NDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDVG 191
M N G + + + N ++ LC E L+ L +P+ I ++ G+C +
Sbjct: 407 MLNKDGVDRT-RIYNIYLRALCLTNSATELLNVLVSMLQTECQPDVITLNTVVNGFCKMH 465
Query: 192 DLIEASKIWNLMTDEGF-EPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
+ EA I MT F P +I + EA+ + + ++ G+ T
Sbjct: 466 RIEEALTILTDMTMGKFCAPDAVTFTTIIAGLLNAGRSQEALNLLYKVMHEKGISPGVET 525
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y VI + K +A + M G+ AD+ T + II GL G + +A K+ +++
Sbjct: 526 YNAVIHGLFKLQLAEEAMRAFKRMLAAGVAADSKTYTLIIDGLCESGLIDKAKKLWDDVI 585
Query: 311 KP----DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
P D +Y ++KGL R + EA E++ G P + +Y +++
Sbjct: 586 WPSRIHDDFVYASILKGLCRAGKLDEACHFLYELVDSGVSPNIISYNIVIDS 637
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 83/376 (22%), Positives = 146/376 (38%), Gaps = 29/376 (7%)
Query: 67 QPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALMTLAEVRELK 125
+P F + I +NR + + D+ L +M R N TF L V E+
Sbjct: 158 KPQFVPSLINYNRFIYQCCEFSQPDVAHRLLFDMISRGHCPNVVTFTSLLTGYCRVGEVG 217
Query: 126 KMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKP-------NEI 178
F M +C + + +++ L ++ + L+ L E +K N
Sbjct: 218 NAYKLFDEMRECSVVPNSLTYSVLIRGLLRQGDFEHGRELMCNLWETMKDEEKNQSVNAA 277
Query: 179 AYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
A+ +I C G L + KI M MI++ + K+ A ++ MM
Sbjct: 278 AFVNVIDSLCREGFLNDVFKIAEDMPQGKSVNQEFAYAHMIDSLCRAGKNHGASRIVYMM 337
Query: 239 RVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR 298
+ K + L +Y +I +CK +AY + EE + G T ++ L
Sbjct: 338 KKKGLTP-SLVSYNSIIHGLCKERGCMRAYQLFEEGIEFGYLPSEYTYKVLVEALCQEMD 396
Query: 299 LREAYKVVEEIEKPD----ISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIM 354
L +A ++VE + D +Y+ ++ L A E V M++ C+P + T
Sbjct: 397 LDKARRIVEAMLNKDGVDRTRIYNIYLRALCLTNSATELLNVLVSMLQTECQPDVITLNT 456
Query: 355 LLQGHLGKR--------------GRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMN 400
++ G G+ V F TI + GL+ AG+S +A + +VM+
Sbjct: 457 VVNGFCKMHRIEEALTILTDMTMGKFCAPDAVTFTTI-IAGLLNAGRSQEALNLLYKVMH 515
Query: 401 -RGVEVPRFDYNKFLH 415
+G+ YN +H
Sbjct: 516 EKGISPGVETYNAVIH 531
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 98/223 (43%), Gaps = 21/223 (9%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEM--GRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
IT N +V+ K I+ L +M G+ + TF + L ++ +N +
Sbjct: 452 ITLNTVVNGFCKMHRIEEALTILTDMTMGKFCAPDAVTFTTIIAGLLNAGRSQEALNLLY 511
Query: 133 -IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDV 190
+M++ G +E N V+ L + +L EA + L+ + + Y +I G C+
Sbjct: 512 KVMHEKGISPGVETYNAVIHGLFKLQLAEEAMRAFKRMLAAGVAADSKTYTLIIDGLCES 571
Query: 191 GDLIEASKIWNLMTDEGFEPSID----VVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
G + +A K+W D+ PS V +++ + K DEA + D
Sbjct: 572 GLIDKAKKLW----DDVIWPSRIHDDFVYASILKGLCRAGKLDEACHFLY-----ELVDS 622
Query: 247 GLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
G+S +Y IVID CK G +AY ++ EM K G+ D +T
Sbjct: 623 GVSPNIISYNIVIDSACKLGMKREAYQVVTEMRKNGLTPDAVT 665
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 128/312 (41%), Gaps = 31/312 (9%)
Query: 147 NKVVKTLC-QRKLVVEAKYLI--LKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLM 203
K + LC Q++ V EA L+ L+LS + +P+ + + +I CD EA + L
Sbjct: 61 TKKIHLLCTQQRKVDEALTLLDHLRLSGY-RPDSLNFSSIIHALCDAKRFKEAHHRFLLC 119
Query: 204 TDEGFEPSIDVVDKMIETFFKINKDDEAMKV-FQMMRVKRMDDLGLSTYRIVIDWMCKRG 262
P + +I + V +++ VK L Y I C+
Sbjct: 120 IASDCVPDERTCNVLIARLLDSQYPHATLHVLYRLFHVKPQFVPSLINYNRFIYQCCEFS 179
Query: 263 KISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYH 318
+ A+ +L +M RG + +T +S++ G G + AYK+ +E+ + P+ Y
Sbjct: 180 QPDVAHRLLFDMISRGHCPNVVTFTSLLTGYCRVGEVGNAYKLFDEMRECSVVPNSLTYS 239
Query: 319 GLIKGLLR---LRRAREATQVFREMIK---RGCEPTMHTYIMLL-----QGHLGKRGRKG 367
LI+GLLR RE E +K + ++ ++ +G L +
Sbjct: 240 VLIRGLLRQGDFEHGRELMCNLWETMKDEEKNQSVNAAAFVNVIDSLCREGFLNDVFKIA 299
Query: 368 PD----PLVNFDTIF---VGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE 420
D VN + + + L +AGK+ A++ V + +G+ YN +H E
Sbjct: 300 EDMPQGKSVNQEFAYAHMIDSLCRAGKNHGASRIVYMMKKKGLTPSLVSYNSIIHGLCKE 359
Query: 421 EGVV----MFEE 428
G + +FEE
Sbjct: 360 RGCMRAYQLFEE 371
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 117/226 (51%), Gaps = 6/226 (2%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEA 196
GCE + + ++ +LC+ + EA L + + + + P+ +Y LI C G L A
Sbjct: 317 GCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLA 376
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVID 256
I + M G P I + ++ K ++A+++F +R +S+Y +I
Sbjct: 377 IGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPP-NVSSYNTMIS 435
Query: 257 WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KP 312
+ G S+A M+ M +GI+ D +T +S+I L G + EA +++++E +P
Sbjct: 436 ALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRP 495
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+ Y+ ++ GL ++RR +A +F EMI++GC P TYI+L++G
Sbjct: 496 TVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEG 541
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 138/312 (44%), Gaps = 23/312 (7%)
Query: 145 MLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
+ K++K K + +A ++ L +P+ AY +I G+C V + A+++ N M
Sbjct: 115 LCTKLIKGFFNFKNIEKASRVMEILESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMK 174
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
GF P I + MI + K A+ V + + + TY I+I+ G I
Sbjct: 175 ARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVI-TYTILIEATIVEGGI 233
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGL 320
++A +LEEM RG+ D T ++II G+ G + A +++ + +PD+ Y+ L
Sbjct: 234 NEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNIL 293
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR--------------- 365
++ L + E ++ EM RGCEP TY +L+ L + GR
Sbjct: 294 LRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISS-LCRFGRIDEAISVLKVMIEKE 352
Query: 366 KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVM 425
PD ++D + + L K G+ A ++ +++ G +YN L
Sbjct: 353 LTPD-TYSYDPL-ISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQ 410
Query: 426 FEEVGKKLREVG 437
E+ KLR +G
Sbjct: 411 ALEIFNKLRGMG 422
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 108/246 (43%), Gaps = 20/246 (8%)
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
L+ C G E+ + ++G+ P + + K+I+ FF ++A +V +++
Sbjct: 84 LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHT 143
Query: 243 MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
D + Y VI CK +I A +L M RG D +T + +I L R +L A
Sbjct: 144 EPD--VFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLA 201
Query: 303 YKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
V++++ P + Y LI+ + EA ++ EM+ RG P M+TY +++G
Sbjct: 202 LTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRG 261
Query: 359 HLGKRG-------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEV 405
+ K G KG +P V I + + GK + K V + +RG E
Sbjct: 262 -MCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEP 320
Query: 406 PRFDYN 411
+ Y+
Sbjct: 321 NKVTYS 326
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 123/286 (43%), Gaps = 20/286 (6%)
Query: 147 NKVVKTLC-QRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N ++ +LC +RKL + L L + P I Y LI+ G + EA K+ M
Sbjct: 186 NIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLA 245
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKIS 265
G P + + +I K + A ++ + K + +S Y I++ +GK
Sbjct: 246 RGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVIS-YNILLRAFLNQGKWD 304
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE-EIEK---PDISLYHGLI 321
+ ++ EMF RG E + +T S +I L GR+ EA V++ IEK PD Y LI
Sbjct: 305 EGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLI 364
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL-----QGHLGK--------RGRKGP 368
L + R A + MI GC P + Y +L G+ + RG P
Sbjct: 365 SALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCP 424
Query: 369 DPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
+ +++T+ + L G A V ++++G++ YN +
Sbjct: 425 PNVSSYNTM-ISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLI 469
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 17/200 (8%)
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE--- 310
+++ CK GK +++ LE + +G D + + +I G + +A +V+E +E
Sbjct: 84 LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHT 143
Query: 311 KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPD- 369
+PD+ Y+ +I G ++ + ATQV M RG P + TY +++ G L R + G
Sbjct: 144 EPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMI-GSLCNRRKLGLAL 202
Query: 370 ------------PLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
P V TI + + G +A K +E ++ RG+ + YN +
Sbjct: 203 TVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 262
Query: 418 SNEEGVVMFEEVGKKLREVG 437
E V E+ L G
Sbjct: 263 CKEGMVERAAELITSLTSKG 282
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 96/244 (39%), Gaps = 3/244 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N +T++ ++ + + ID L+ M + L D ++ + L + L +
Sbjct: 321 NKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIM 380
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
M GC + N ++ LC+ +A + KL PN +Y +I
Sbjct: 381 DYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSC 440
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
GD A + M +G +P + +I + +EA+ + M +S
Sbjct: 441 GDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVIS- 499
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y IV+ +CK +I A M EM ++G + T +I G+ G EA ++ +
Sbjct: 500 YNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLF 559
Query: 311 KPDI 314
D+
Sbjct: 560 SRDV 563
>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 657
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 158/360 (43%), Gaps = 25/360 (6%)
Query: 73 NSITFNRMVDIIGKSR--NIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVN 129
N +++N + I+G R NI+ + +EM N TF I + + +++ +
Sbjct: 283 NVVSYNNI--ILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFS 340
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYC 188
FH M D + L ++K LC+ E + L K +S+ P + Y +I G+
Sbjct: 341 IFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFI 400
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
G++ AS ++ M + G PS +I+ F K N D A+K+ M+ K + + +
Sbjct: 401 KEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLK-MDI 459
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY----K 304
Y +ID CKR + A+ +L E+ G+ + +S+I G + EA K
Sbjct: 460 KAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKK 519
Query: 305 VVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
+V E D+ Y LI GLL+ R A+ + EM+ +G P + +L+ G L +G
Sbjct: 520 MVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLING-LCNKG 578
Query: 365 R-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
+ K P V + G K G +A + + +++RG+ Y+
Sbjct: 579 QFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYD 638
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 96/191 (50%), Gaps = 5/191 (2%)
Query: 179 AYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
AYG LI G+C D+ A ++ N + G P+ + + MI F +N +EA+ +++ M
Sbjct: 461 AYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKM 520
Query: 239 RVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR 298
V L TY +ID + K G++ A + EM +GI D+ + +I GL +G+
Sbjct: 521 -VNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQ 579
Query: 299 LREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIM 354
A K++E++ P + +Y+ LI G + +EA ++ EM+ RG P TY +
Sbjct: 580 FENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDI 639
Query: 355 LLQGHLGKRGR 365
L+ G G
Sbjct: 640 LVNGKFKGDGN 650
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 139/311 (44%), Gaps = 30/311 (9%)
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M +CG +L + ++K C + + A L+ ++SE + PN++ Y LI G C G+
Sbjct: 136 MVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGN 195
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ +A + ++ M +G S+ ++ ++E + K A +F + ++ T+
Sbjct: 196 IEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANV--FTFN 253
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
++ W+CK GK+++A + +E+ +GI + ++ ++II G + + A KV +E+
Sbjct: 254 TLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDN 313
Query: 311 --KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGP 368
P+ + L+ G + A +F M PT T LG
Sbjct: 314 GFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTT--------LG------- 358
Query: 369 DPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEE 428
I + GL KAG+S + + +++G YN + + E + +
Sbjct: 359 --------IIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASN 410
Query: 429 VGKKLREVGLA 439
V +++ EVG+
Sbjct: 411 VYREMCEVGIT 421
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 139/317 (43%), Gaps = 28/317 (8%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRE----LKKMV 128
N +T++ ++D K+ NI+ +E EM K + ++ +L + E +
Sbjct: 179 NKVTYSVLIDGCCKNGNIEKAFEFYSEM------KTKGIRSSVYSLNSILEGYLKCQSWQ 232
Query: 129 NFFHIMNDCGCEYSLE---MLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLI 184
N F + ND E L N ++ LC+ + EA L + +++ I PN ++Y +I
Sbjct: 233 NAFTMFND-ALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNII 291
Query: 185 KGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD 244
G+C ++ A K++ M D GF P+ +++ +FK + A +F RM
Sbjct: 292 LGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFH-----RMK 346
Query: 245 DLGL----STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
D + +T I+I +CK G+ + + + +G + ++II G + G +
Sbjct: 347 DANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNIN 406
Query: 301 EAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
A V E+ + P Y LI G + A ++ +M ++G + + Y L+
Sbjct: 407 LASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLI 466
Query: 357 QGHLGKRGRKGPDPLVN 373
G +R K L+N
Sbjct: 467 DGFCKRRDMKSAHELLN 483
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/269 (20%), Positives = 112/269 (41%), Gaps = 44/269 (16%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEV 121
Y + + +++T+ ++D K NIDL + L +M R+
Sbjct: 412 YREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRK------------------ 453
Query: 122 RELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAY 180
G + ++ ++ C+R+ + A L+ +L + PN Y
Sbjct: 454 ----------------GLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIY 497
Query: 181 GWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
+I G+ ++ ++ EA ++ M +EG + +I+ K + A + M
Sbjct: 498 NSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLS 557
Query: 241 KRM--DDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR 298
K + DD + ++I+ +C +G+ A +LE+M + + L +++I G G
Sbjct: 558 KGILPDD---RAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGN 614
Query: 299 LREAYKVVEEIEK----PDISLYHGLIKG 323
L+EA+++ +E+ PD Y L+ G
Sbjct: 615 LQEAFRLHDEMLDRGLVPDNITYDILVNG 643
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 92/213 (43%), Gaps = 17/213 (7%)
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
T+ VI K G +++A + ++M G + +S++ G +G LR A +V E
Sbjct: 111 GTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNE 170
Query: 309 IEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
I + P+ Y LI G + +A + + EM +G ++++ +L+G+L +
Sbjct: 171 ISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQS 230
Query: 365 ------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNK 412
G + F+T+ + L K GK +A + V+ +G+ YN
Sbjct: 231 WQNAFTMFNDALESGLANVFTFNTL-LSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNN 289
Query: 413 FLHYYSNEEGVVMFEEVGKKLREVGLADLADIF 445
+ + ++ + +V K++ + G A F
Sbjct: 290 IILGHCRKDNINAACKVYKEMLDNGFTPNAVTF 322
>gi|147797621|emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera]
Length = 912
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 131/272 (48%), Gaps = 13/272 (4%)
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW--IKPNEIAYGWLIKG 186
N ++ ++ GC+ +L N ++ C++ L+ A ++ +++E P+ + Y LI G
Sbjct: 271 NAKNVFDEMGCKPNLVTYNTMINGFCKKGLMESAMKIVDQMTETEDCMPDTVTYTTLIDG 330
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
YC G+L EA K M EP++ + +I DEA ++ MR+ + D
Sbjct: 331 YCKRGELEEAMKYMEEMVSRNCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNGLKD- 389
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
++T+ ++ +C GK+ A L+EM G+EAD ++ G+ +A ++
Sbjct: 390 NVATHTSILKGLCVVGKLDDAARHLKEMVGLGMEADAKAYGVVVNEYCKIGKADDAISLL 449
Query: 307 EEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
+E++ P +S ++ + + L+ + +A + R+M + GC P +Y ++ G
Sbjct: 450 KEMKSRGINPSVSSFNAVFRILVESGKTDKAGLILRQMKQLGCTPNFLSYSTVIDGLCKA 509
Query: 363 RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKY 394
+GR ++ FV + + G LDA+ Y
Sbjct: 510 KGR------MHEVEEFVDDMCRNGHHLDASMY 535
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 128/253 (50%), Gaps = 22/253 (8%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
+KP+ Y +I+GYC +G +IE +K N+ + G +P++ + MI F K + AM
Sbjct: 249 VKPDVSTYTTIIRGYCKMG-MIENAK--NVFDEMGCKPNLVTYNTMINGFCKKGLMESAM 305
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
K+ M TY +ID CKRG++ +A +EEM R E + LT ++IIYG
Sbjct: 306 KIVDQMTETEDCMPDTVTYTTLIDGYCKRGELEEAMKYMEEMVSRNCEPNVLTYNAIIYG 365
Query: 293 LLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
L G + EA +++ + K +++ + ++KGL + + +A + +EM+ G E
Sbjct: 366 LCLNGNVDEAKRMMTRMRLNGLKDNVATHTSILKGLCVVGKLDDAARHLKEMVGLGMEAD 425
Query: 349 MHTYIMLLQGH--LGKRG----------RKGPDPLV-NFDTIFVGGLVKAGKSLDAAKYV 395
Y +++ + +GK +G +P V +F+ +F LV++GK+ D A +
Sbjct: 426 AKAYGVVVNEYCKIGKADDAISLLKEMKSRGINPSVSSFNAVFR-ILVESGKT-DKAGLI 483
Query: 396 ERVMNRGVEVPRF 408
R M + P F
Sbjct: 484 LRQMKQLGCTPNF 496
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 114/259 (44%), Gaps = 20/259 (7%)
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
++ A +K Y D GD+ A ++ + + ++ F K N+ A VF
Sbjct: 181 SDFAAAKFVKAYGDRGDIRGAIHWFHRAKKMESGRCLFSYNAILGVFVKANRIMLARAVF 240
Query: 236 QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
+ + + +STY +I CK G I A + +EM G + + +T +++I G
Sbjct: 241 DQIVKEGVVKPDVSTYTTIIRGYCKMGMIENAKNVFDEM---GCKPNLVTYNTMINGFCK 297
Query: 296 RGRLREAYKVVEEIEK-----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
+G + A K+V+++ + PD Y LI G + EA + EM+ R CEP +
Sbjct: 298 KGLMESAMKIVDQMTETEDCMPDTVTYTTLIDGYCKRGELEEAMKYMEEMVSRNCEPNVL 357
Query: 351 TYI-----MLLQGHLGKRGR-------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERV 398
TY + L G++ + R G V T + GL GK DAA++++ +
Sbjct: 358 TYNAIIYGLCLNGNVDEAKRMMTRMRLNGLKDNVATHTSILKGLCVVGKLDDAARHLKEM 417
Query: 399 MNRGVEVPRFDYNKFLHYY 417
+ G+E Y ++ Y
Sbjct: 418 VGLGMEADAKAYGVVVNEY 436
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 133/304 (43%), Gaps = 22/304 (7%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTL---AEVRELKKMV 128
+++T+ ++D K ++ + ++EM R N T+ + L V E K+M+
Sbjct: 320 DTVTYTTLIDGYCKRGELEEAMKYMEEMVSRNCEPNVLTYNAIIYGLCLNGNVDEAKRMM 379
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQ-RKLVVEAKYLILKLSEWIKPNEIAYGWLIKGY 187
+ G + ++ ++K LC KL A++L + ++ + AYG ++ Y
Sbjct: 380 TRMRLN---GLKDNVATHTSILKGLCVVGKLDDAARHLKEMVGLGMEADAKAYGVVVNEY 436
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C +G +A + M G PS+ + + + K D+A + + M+ LG
Sbjct: 437 CKIGKADDAISLLKEMKSRGINPSVSSFNAVFRILVESGKTDKAGLILRQMK-----QLG 491
Query: 248 LS----TYRIVIDWMCK-RGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
+ +Y VID +CK +G++ + +++M + G D S ++ G G A
Sbjct: 492 CTPNFLSYSTVIDGLCKAKGRMHEVEEFVDDMCRNGHHLDASMYSWLVKGYCEDGNADMA 551
Query: 303 YKVVEEIEKP----DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
++ E+ ++ + +KGL +A E + F EM +R +H Y +L
Sbjct: 552 MRLFCEMLDMGYVINLESFLAFVKGLSAKEKAFEVEKFFEEMSRRCPGIDIHKYRRILDE 611
Query: 359 HLGK 362
HL K
Sbjct: 612 HLCK 615
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 18/161 (11%)
Query: 293 LLARGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
+LAR + K E + KPD+S Y +I+G ++ A VF EM GC+P + TY
Sbjct: 234 MLARAVFDQIVK--EGVVKPDVSTYTTIIRGYCKMGMIENAKNVFDEM---GCKPNLVTY 288
Query: 353 IMLLQGHLGK----RGRKGPDPLVNFD---------TIFVGGLVKAGKSLDAAKYVERVM 399
++ G K K D + + T + G K G+ +A KY+E ++
Sbjct: 289 NTMINGFCKKGLMESAMKIVDQMTETEDCMPDTVTYTTLIDGYCKRGELEEAMKYMEEMV 348
Query: 400 NRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLAD 440
+R E YN ++ V + + ++R GL D
Sbjct: 349 SRNCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNGLKD 389
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 101/444 (22%), Positives = 189/444 (42%), Gaps = 68/444 (15%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMV 128
F + + +N +D GK +D+ W+ EM + LV +D T+ + L + R L + V
Sbjct: 269 FTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAV 328
Query: 129 NFFHIMN-----DC------------------------------GCEYSLEMLNKVVKTL 153
F ++ C GC S+ N ++ L
Sbjct: 329 ELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCL 388
Query: 154 CQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSID 213
++ V EA + ++ + PN Y LI C G+L A K+ + M + G P+I
Sbjct: 389 GRKGKVEEALRIHDEMRQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIM 448
Query: 214 VVDKMIETFFKINKDDEAMKVFQMM--RVKRMDDLGLSTYRIVIDWMCKRGKISQAYTML 271
V+ MI+ K K DEA +F + +V D T+ +ID + +RG++ AY++
Sbjct: 449 TVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDS---RTFCSLIDGLGRRGRVDDAYSLY 505
Query: 272 EEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRL 327
E+M + + +S+I GR + +K+ +E+ PD+ L + + + +
Sbjct: 506 EKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKA 565
Query: 328 RRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG-------------RKGPD-PLVN 373
+ +F E+ +G P + +Y +L+ G L K G +G ++
Sbjct: 566 GEVEKGRALFEEIKAQGLVPDVRSYSILIHG-LVKAGFSRETYKLFYEMKEQGLHLDVLA 624
Query: 374 FDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN----EEGVVMFEE- 428
++T+ + G K+GK A + +E + +G++ Y + + +E ++FEE
Sbjct: 625 YNTV-IDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEA 683
Query: 429 --VGKKLREVGLADLADIFQRYGK 450
+G L V + L D F + G+
Sbjct: 684 KSIGVDLNVVIYSSLIDGFGKVGR 707
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 169/382 (44%), Gaps = 29/382 (7%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALMTLAEVRELKKMVNFF 131
+S TF ++D +G+ +D + ++M ++ N + + + + +
Sbjct: 481 DSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIY 540
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
M GC L +LN + + + V + + L ++ ++ + P+ +Y LI G
Sbjct: 541 KEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKA 600
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G E K++ M ++G + + +I+ F K K D+A ++ + M+ K + + T
Sbjct: 601 GFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPT-VVT 659
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y V+D + K ++ +AY + EE G++ + + SS+I G GR+ EAY ++EE+
Sbjct: 660 YGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELM 719
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG-------- 358
+ P+ ++ L+ L++ EA F+ M C P TY +++ G
Sbjct: 720 QKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFN 779
Query: 359 -------HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
+ K+G K P+ + T + GL KAG ++A +R G YN
Sbjct: 780 KAFVFWQEMQKQGLK-PNNITY--TTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYN 836
Query: 412 KFLHYYSNE----EGVVMFEEV 429
+ S+ + ++FEE
Sbjct: 837 AMIEGLSSANKAMDAYIVFEET 858
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 117/245 (47%), Gaps = 19/245 (7%)
Query: 178 IAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQM 237
+AY +I G+C G + +A ++ M +G +P++ +++ KI++ DEA +F+
Sbjct: 623 LAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEE 682
Query: 238 MRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
+ +D L + Y +ID K G+I +AY +LEE+ ++G+ ++ T + ++ L+
Sbjct: 683 AKSIGVD-LNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAE 741
Query: 298 RLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYI 353
+ EA + ++ P+ Y +I GL +R+ +A ++EM K+G +P TY
Sbjct: 742 EIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYT 801
Query: 354 MLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMN 400
++ G L K G G P + GL A K++DA E
Sbjct: 802 TMIAG-LAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRL 860
Query: 401 RGVEV 405
+G V
Sbjct: 861 KGCRV 865
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 147/322 (45%), Gaps = 40/322 (12%)
Query: 77 FNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFFHIMN 135
N +D + K+ ++ +E+ + LV D +++ I + L + ++ F+ M
Sbjct: 555 LNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMK 614
Query: 136 DCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLI 194
+ G + N V+ C+ V +A L+ ++ ++ ++P + YG ++ G + L
Sbjct: 615 EQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLD 674
Query: 195 EASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ------------------ 236
EA ++ G + ++ + +I+ F K+ + DEA + +
Sbjct: 675 EAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLL 734
Query: 237 --MMRVKRMDDLGLS--------------TYRIVIDWMCKRGKISQAYTMLEEMFKRGIE 280
+++ + +D+ + TY I+I+ +C K ++A+ +EM K+G++
Sbjct: 735 DALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLK 794
Query: 281 ADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQV 336
+N+T +++I GL G + EA + + + PD + Y+ +I+GL +A +A V
Sbjct: 795 PNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIV 854
Query: 337 FREMIKRGCEPTMHTYIMLLQG 358
F E +GC T ++LL
Sbjct: 855 FEETRLKGCRVNSKTCVVLLDA 876
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 156/374 (41%), Gaps = 60/374 (16%)
Query: 54 RPVYLFFQY----TQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK 109
+ V + FQY +K Q AH +N + ++ ++RN+D + L+EM
Sbjct: 111 KDVNVAFQYFRWVERKTQQ--AHCPEVYNAFLMVMARTRNLDYLEQILEEMS-------- 160
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
V F + N S+E++ VK+ KL EA +I +
Sbjct: 161 ------------------VAGFGLSN----HVSVELVASFVKS---HKL-KEAFGVIEMM 194
Query: 170 SEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++ +P AY LI +++ M + G+E ++ + ++ F + +
Sbjct: 195 RKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRI 254
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
D A+ + M+ L Y + ID K GK+ A+ EM +G+ D++T ++
Sbjct: 255 DAALSLLDEMKSNSF-TADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTT 313
Query: 289 IIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+I L RL EA ++ EE++ P + Y+ +I G + EA + ++G
Sbjct: 314 LIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKG 373
Query: 345 CEPTMHTYIMLLQGHLGKRG------------RKGPDPLVNFDTIFVGGLVKAGKSLDAA 392
C P++ Y +L LG++G R+ P + I + L KAG+ L+AA
Sbjct: 374 CIPSVIAYNCILTC-LGRKGKVEEALRIHDEMRQDAAPNLTTYNILIDMLCKAGE-LEAA 431
Query: 393 KYVERVMNRGVEVP 406
V+ M P
Sbjct: 432 LKVQDTMKEAGLFP 445
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 94/209 (44%), Gaps = 6/209 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
N + ++ ++D GK ID + L+E+ ++ L N T+ L L + E+ + F
Sbjct: 691 NVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCF 750
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDV 190
M + C + + ++ LC + +A ++ + +KPN I Y +I G
Sbjct: 751 QNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKA 810
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G+++EA +++ G P + MIE NK +A VF+ R+K + T
Sbjct: 811 GNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGC-RVNSKT 869
Query: 251 YRIVIDWMCKRGKISQAY---TMLEEMFK 276
+++D + K + QA +L EM K
Sbjct: 870 CVVLLDALHKADCLEQAAIVGAVLREMAK 898
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 95/234 (40%), Gaps = 19/234 (8%)
Query: 198 KIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDW 257
+I M+ GF S V +++ +F K +K EA V +MMR + S Y +I
Sbjct: 154 QILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMMRKFKFRP-AFSAYTTLIGA 212
Query: 258 MCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PD 313
+ + T+ +M + G EA+ ++++ GR+ A +++E++ D
Sbjct: 213 LSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTAD 272
Query: 314 ISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPD---- 369
+ LY+ I ++ + A + F EM +G P TY L+ G L K R
Sbjct: 273 LVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLI-GVLCKARRLDEAVELF 331
Query: 370 ---------PLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
P V + G AGK +A +ER +G YN L
Sbjct: 332 EELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCIL 385
>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
Length = 535
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 163/365 (44%), Gaps = 33/365 (9%)
Query: 63 TQKAQPCFAHNSITFNRMVDIIGKS----RNIDLFWETLQEMGRRRLVNDKTFKIALMTL 118
K +P +T+ +VD + K+ R D+F E +++ + ++ + L
Sbjct: 134 ASKCEPTL----LTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKA 189
Query: 119 AEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEI 178
V E +K+V+ +M G + +V LC+ + EA I ++ +
Sbjct: 190 GRVDEARKLVD---LMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRV 246
Query: 179 -AYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQM 237
Y +++ GY +G + EA + M D P IE + I + +EA KVF+
Sbjct: 247 DTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFET 306
Query: 238 MRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
M V++ + TY I+ID CK G ++ A +L M K ++ + + I+ G +
Sbjct: 307 M-VEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSS 365
Query: 298 RLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG--CEPTMHT 351
RL EA ++ + I K P Y+ +I L +L++ EA ++ REM +R EP++ T
Sbjct: 366 RLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVT 425
Query: 352 YIMLLQGHLGKRGRK-------------GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERV 398
Y M++ G LGK G + G P T + L AGK A + +E +
Sbjct: 426 YSMIIHG-LGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEM 484
Query: 399 MNRGV 403
+ G+
Sbjct: 485 LKAGI 489
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 122/271 (45%), Gaps = 24/271 (8%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEG---FE----PSIDVVDKMIETFFKI 225
I N +G ++ C DL +A +N T+E FE P +++ FK
Sbjct: 60 ITSNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVDGLFKA 119
Query: 226 NKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
D ++ ++ M + + L TY +++D +CK K+ +A + EEM ++G + D +
Sbjct: 120 GNYDAGLEYYEKMVASKCEPT-LLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIA 178
Query: 286 LSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMI 341
SS+I GL GR+ EA K+V+ + P Y ++ GL + R +EA + +EM
Sbjct: 179 YSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMR 238
Query: 342 KRGCEPTMHTYIMLLQGHLG------------KRGRKGPDPLVNFDTIFVGGLVKAGKSL 389
+R P + TY ++ G++G + + P T+F+ L G+
Sbjct: 239 RRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRRE 298
Query: 390 DAAKYVERVMNRGVEVPRFDYNKFLHYYSNE 420
+A K E ++ +G + Y + + E
Sbjct: 299 EAEKVFETMVEKGCKPDMHTYGIIIDNFCKE 329
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 98/191 (51%), Gaps = 9/191 (4%)
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
KP+ YG +I +C G + A+ + LM +P+ + +++ F K ++ +EA++
Sbjct: 313 KPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALE 372
Query: 234 VFQMMRVKRMDDLGLS-TYRIVIDWMCKRGKISQAYTMLEEMFKRG--IEADNLTLSSII 290
++Q R+ + L + TY VI+ +CK K+ +A +L EM +R +E +T S II
Sbjct: 373 LYQ--RILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMII 430
Query: 291 YGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
+GL G A+ ++ E+ PD Y LI+ L + A ++ EM+K G
Sbjct: 431 HGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIF 490
Query: 347 PTMHTYIMLLQ 357
P HTY L+Q
Sbjct: 491 PDDHTYGTLVQ 501
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 110/257 (42%), Gaps = 45/257 (17%)
Query: 94 WETLQEMGRRRLVNDKT----FKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKV 149
+ ++EM R D F AL ++ E +K+ F M + GC+ + +
Sbjct: 266 FAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKV---FETMVEKGCKPDMHTYGII 322
Query: 150 VKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGF 208
+ C+ + A +++ L +KPN Y ++ G+ L EA +++ + +G
Sbjct: 323 IDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGI 382
Query: 209 EPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR-------------------------- 242
PS + +I K+ K DEA+++ + M+ ++
Sbjct: 383 LPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERA 442
Query: 243 ------MDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
M D G+ TY +I + GK+S+A +LEEM K GI D+ T +++
Sbjct: 443 FDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQ- 501
Query: 293 LLARGRLREAYKVVEEI 309
+L R + A+ +++E+
Sbjct: 502 ILCRSDVDAAWDLLQEM 518
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 149/342 (43%), Gaps = 55/342 (16%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALMTLAEVRELKKMVNFF 131
N T+N M+D K ++ E QEM G L N TF I + L + E+ F
Sbjct: 262 NLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFL 321
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYL------------ILKLSEWIK----- 174
M G ++ + N ++ C+ + EA L + S IK
Sbjct: 322 IDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGV 381
Query: 175 -------------------PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVV 215
PN + Y LI GYC G++ +A ++ + MT++G EP+I
Sbjct: 382 DRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITF 441
Query: 216 DKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMF 275
+I+ + K K + AM ++ M +K + + Y +ID K G +A+ + +EM
Sbjct: 442 STLIDGYCKAGKMEAAMGLYTEMVIKGLLP-DVVAYTALIDGHFKDGNTKEAFRLHKEMQ 500
Query: 276 KRGIEADNLTLSSIIYGLLARGRLREAYKV-------------VEEIEK----PDISLYH 318
+ G+ + TLS +I GL GR+ +A K+ E+++ P+ +Y
Sbjct: 501 EAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYT 560
Query: 319 GLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL 360
LI+GL R +A++ F +M G P + T I+++QGH
Sbjct: 561 ALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHF 602
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 129/279 (46%), Gaps = 22/279 (7%)
Query: 149 VVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEG 207
+++ LC + EA+ + + + + PN Y ++ GYC + + +A +++ M +G
Sbjct: 234 LIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDG 293
Query: 208 FEPSIDVVDKMIETFFKINKDDEAMK-VFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQ 266
P++ +I+ K ++ A K + M + ++ Y +ID CK G +S+
Sbjct: 294 LLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNI--FVYNCLIDGYCKAGNLSE 351
Query: 267 AYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIK 322
A ++ E+ K I D T S +I GL R+ EA +++E++K P+ Y+ LI
Sbjct: 352 ALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLID 411
Query: 323 GLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR-------------KGPD 369
G + +A +V +M ++G EP + T+ L+ G+ K G+ KG
Sbjct: 412 GYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYC-KAGKMEAAMGLYTEMVIKGLL 470
Query: 370 PLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRF 408
P V T + G K G + +A + + + G+ F
Sbjct: 471 PDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVF 509
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 105/247 (42%), Gaps = 22/247 (8%)
Query: 97 LQEMGRRR-LVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQ 155
LQEM ++ L N T+ + + ++K + M + G E ++ + ++ C+
Sbjct: 391 LQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCK 450
Query: 156 RKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDV 214
+ A L ++ + + P+ +AY LI G+ G+ EA ++ M + G P++
Sbjct: 451 AGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFT 510
Query: 215 VDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST--------------YRIVIDWMCK 260
+ +I+ K + +A+K+F + D G T Y +I +C
Sbjct: 511 LSCLIDGLCKDGRISDAIKLF--LAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCT 568
Query: 261 RGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISL 316
G+I +A +M G+ D T II G LR+ + +I K P+ S+
Sbjct: 569 DGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSV 628
Query: 317 YHGLIKG 323
Y L KG
Sbjct: 629 YRVLAKG 635
Score = 41.6 bits (96), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 99/243 (40%), Gaps = 28/243 (11%)
Query: 63 TQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVR 122
+Q + N ITF+ ++D K+ ++ EM + L+ D AL+ +
Sbjct: 427 SQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALID-GHFK 485
Query: 123 E--LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS---------- 170
+ K+ M + G ++ L+ ++ LC+ + +A L L +
Sbjct: 486 DGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTN 545
Query: 171 ----EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKIN 226
PN + Y LI+G C G + +ASK ++ M G P + +I+ F+
Sbjct: 546 ELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFR-- 603
Query: 227 KDDEAMKVFQMMRVKR-MDDLGL----STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEA 281
AM + +M ++ + +G+ S YR++ + G + A E++ GI
Sbjct: 604 ----AMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALRCSEDLSGIGIGC 659
Query: 282 DNL 284
NL
Sbjct: 660 SNL 662
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 172/371 (46%), Gaps = 26/371 (7%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
F NS T+ ++ + + +D L ++ +V T ++ + E K +++
Sbjct: 336 FTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMH 395
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYC 188
M GC + N ++ LC++ +V A+ L+ ++ + +PN I Y LI +C
Sbjct: 396 --ESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 453
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
G L EA + + M+ +G + + +I K K +A+ +F M K +
Sbjct: 454 KEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKP-DI 512
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
T+ +I +CK K +A + ++M G+ A+ +T +++I+ L RG ++EA K+V +
Sbjct: 513 FTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVND 572
Query: 309 I-----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
+ DI+ Y+GLIK L R + +F +M+ +G P + +L+ G L +
Sbjct: 573 MLFRGCPLDDIT-YNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILING-LCRT 630
Query: 364 G-------------RKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFD 409
G +G P +V ++++ + GL K G++ +A +++ G+
Sbjct: 631 GNIQHALEFLRDMIHRGLTPDIVTYNSL-INGLCKTGRAQEALNLFDKLQVEGICPDAIT 689
Query: 410 YNKFLHYYSNE 420
YN + ++ E
Sbjct: 690 YNTLISWHCKE 700
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 172/383 (44%), Gaps = 34/383 (8%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHIM 134
TF ++ + +D L++M R V N ++ + L++V + +++ M
Sbjct: 237 TFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEM 296
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGDL 193
GC + N + LC+ + EA L+ + L PN YG L+ G C +G +
Sbjct: 297 LLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKV 356
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ--MMRVKRMDDLGLSTY 251
EA + N + + P++ + + +I + + DEA V M+ V D + TY
Sbjct: 357 DEARMLLNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPD--IFTY 410
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK 311
+I +CK+G + A ++ EM +G E + +T + +I GRL EA V++E+
Sbjct: 411 NTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSG 470
Query: 312 PDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKG 367
++L Y+ LI L + + ++A +F +M +GC+P + T+ L+ G + K
Sbjct: 471 KGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLC--KVNKF 528
Query: 368 PDPLVNFDTIFVGGLV--------------KAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
+ L + + + G++ + G +A K V ++ RG + YN
Sbjct: 529 EEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGL 588
Query: 414 LHYYSN----EEGVVMFEEVGKK 432
+ E+G+ +FE++ K
Sbjct: 589 IKALCRAGNIEKGLALFEDMMSK 611
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 126/269 (46%), Gaps = 16/269 (5%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
LS+ I P +G ++K C V ++ A + MT G P+ V +I K+ +
Sbjct: 227 LSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRV 286
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
+E +K+ + M + ++T+ I +CK +I +A +++ M RG ++ T
Sbjct: 287 NEVLKLLEEMLLMGCIP-DVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGV 345
Query: 289 IIYGLLARGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFRE-MIKRGCEP 347
+++GL G++ EA ++ ++ P++ L++ LI G + R EA V E M+ GC P
Sbjct: 346 LMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGP 405
Query: 348 TMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKY 394
+ TY L+ G L K+G KG +P V TI + K G+ +A
Sbjct: 406 DIFTYNTLILG-LCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNV 464
Query: 395 VERVMNRGVEVPRFDYNKFLHYYSNEEGV 423
++ + +G+ + YN + +E V
Sbjct: 465 LDEMSGKGLALNAVGYNCLISALCKDEKV 493
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 130/291 (44%), Gaps = 7/291 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALMTLAEVRELKKMVNFF 131
N IT+ ++D K ++ L EM G+ +N + + L + +++ +N F
Sbjct: 441 NVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMF 500
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDV 190
M+ GC+ + N ++ LC+ EA L L E + N I Y LI +
Sbjct: 501 GDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRR 560
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G + EA K+ N M G + +I+ + ++ + +F+ M K ++ +S
Sbjct: 561 GAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISC 620
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
I+I+ +C+ G I A L +M RG+ D +T +S+I GL GR +EA + ++++
Sbjct: 621 -NILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQ 679
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
PD Y+ LI + +A + + G P T+ +L+
Sbjct: 680 VEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVS 730
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 94/231 (40%), Gaps = 10/231 (4%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
F NS+ F + + + L+ + L E + T A + ++E K+VN
Sbjct: 513 FTFNSLIFG-LCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVN 571
Query: 130 --FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKG 186
F GC N ++K LC+ + + L + S+ + PN I+ LI G
Sbjct: 572 DMLFR-----GCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILING 626
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
C G++ A + M G P I + +I K + EA+ +F ++V+ +
Sbjct: 627 LCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPD 686
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
+ TY +I W CK G A+ +L G + +T ++ + G
Sbjct: 687 AI-TYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 736
>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Vitis
vinifera]
Length = 829
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 179/402 (44%), Gaps = 56/402 (13%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMV 128
F + ++FN ++ K ++D+ M + L+ D ++ I L L +++ +
Sbjct: 266 FGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEAL 325
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGY 187
F + M + G E + N + L+ A ++ + L + P+ + Y LI G+
Sbjct: 326 EFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGH 385
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C +G++ E+ K+ M +G + SI ++ + K + DEA+ + M V +
Sbjct: 386 CQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKP-D 444
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
L TY ++I +CKRG + +A + EEM + I ++ S+II GL +G + EA +
Sbjct: 445 LLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFD 504
Query: 308 EIEKPDIS----LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
+ K D++ LY+ +I G +L EA + ++++I++G PT+ T+ L+ G K+
Sbjct: 505 SVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYG-FCKK 563
Query: 364 GR-------------KGPDP-------LVN-----------FD----------------- 375
G+ G P L+N FD
Sbjct: 564 GKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITY 623
Query: 376 TIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
T+ V GL K G+ ++ + ++ + RG+ + YN + +
Sbjct: 624 TVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSF 665
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 157/366 (42%), Gaps = 33/366 (9%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVN 129
+NS+ +N R+ D+ W+ E+ + N+ T I + L L+ V
Sbjct: 205 TYNSLLYNL--------RHTDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVT 256
Query: 130 FFHIMNDCGCEY---SLEMLNKVVKTLCQRKLVVEAK-YLILKLSEWIKPNEIAYGWLIK 185
F + + G E S+ N ++ C+ V AK + + + + P+ +Y L+
Sbjct: 257 F---LRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLH 313
Query: 186 GYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD 245
G C G + EA + N M + G EP I + + F + A KV Q M + ++
Sbjct: 314 GLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNP 373
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
L TY I+I C+ G I +++ + E+M +G++ +T + ++ L GR+ EA +
Sbjct: 374 -DLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVIL 432
Query: 306 VEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG 361
+ E+E KPD+ Y LI GL + EA +++ EM + P ++ G
Sbjct: 433 LHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFE 492
Query: 362 KRGRKGP----DPLVNFDT--------IFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFD 409
K D + D I + G K G +A + ++++ +G+
Sbjct: 493 KGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVT 552
Query: 410 YNKFLH 415
+N ++
Sbjct: 553 FNSLIY 558
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 105/226 (46%), Gaps = 18/226 (7%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIK-----PNEIAYGWLIKGYCDVGD 192
G ++ N ++ C++ + EA +KL + IK P + Y L+ GYC+ GD
Sbjct: 545 GISPTIVTFNSLIYGFCKKGKLAEA----VKLLDTIKVHGLVPTSVTYTTLMNGYCEEGD 600
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM--DDLGLST 250
+ + + M + +P+ +++ K + E++++ + M + + D + T
Sbjct: 601 MHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQI---T 657
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y VI CK + +A+ + +M + ++ +T + +I GL G L++A +++ ++
Sbjct: 658 YNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQ 717
Query: 311 KPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
I L Y +IK + A F +M++RG E ++ Y
Sbjct: 718 DQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDY 763
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 104/247 (42%), Gaps = 28/247 (11%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
I P + + LI G+C G L EA K+ + + G P+ ++ + +
Sbjct: 546 ISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMF 605
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
+ M K + + TY +V+ +CK G++ ++ +L+ M+ RG+ D +T +++I
Sbjct: 606 DMLHEMEAKAIKPTQI-TYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQS 664
Query: 293 LLARGRLREAYKV----VEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
L++A+++ ++ +P Y+ LI GL ++A ++ + + T
Sbjct: 665 FCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLT 724
Query: 349 MHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRF 408
Y +++ H K G +A + +++ RG EV
Sbjct: 725 KVAYTTIIKAHCAK-----------------------GDVQNALVFFHQMVERGFEVSIR 761
Query: 409 DYNKFLH 415
DY+ ++
Sbjct: 762 DYSAVIN 768
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 2/166 (1%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
IT+ +V + K + + L+ M R L D+ T+ + + + +L+K +
Sbjct: 621 ITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQ 680
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGD 192
M + S N ++ LC + +A L++ L + I+ ++AY +IK +C GD
Sbjct: 681 MLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGD 740
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
+ A ++ M + GFE SI +I K N +A F MM
Sbjct: 741 VQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMM 786
>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 623
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 183/420 (43%), Gaps = 53/420 (12%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMV 128
F + T N ++ ++ + I+ W +M R + N TF I + L + +LKK
Sbjct: 187 FDPKTETCNHILSLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAK 246
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL------------------- 169
F IM G + ++ N +V+ R + A+ +I ++
Sbjct: 247 GFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPILSWM 306
Query: 170 ------SEWIK--------PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVV 215
SE ++ P+ ++Y LI+G + GDL A + M +G P+
Sbjct: 307 CNEGRASEVLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTY 366
Query: 216 DKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMF 275
+ +I F NK + A + + +R K + L TY IVI+ C+ G +A+ + +EM
Sbjct: 367 NTLIHGLFMENKIEAAEILIREIREKGIV-LDSVTYNIVINGYCQHGDAKKAFALHDEMM 425
Query: 276 KRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAR 331
GI+ T +S+IY L R + REA ++ E++ KPD+ + + L+ G
Sbjct: 426 TDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMD 485
Query: 332 EATQVFREMIKRGCEPTMHTYIMLLQG------------HLGKRGRKGPDP-LVNFDTIF 378
A + +EM + +P TY L++G +G+ R+G P ++++T+
Sbjct: 486 RAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTL- 544
Query: 379 VGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
+ G K G + A + +++ G YN L S + + EE+ ++++ G+
Sbjct: 545 ISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLREMKSEGI 604
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 133/304 (43%), Gaps = 40/304 (13%)
Query: 95 ETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTL 153
E L+EM LV D ++ I + + +L+ + M G + N ++ L
Sbjct: 314 EVLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGL 373
Query: 154 CQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSI 212
+ A+ LI ++ E I + + Y +I GYC GD +A + + M +G +P+
Sbjct: 374 FMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQ 433
Query: 213 DVVDKMIETFFKINKDDEAMKVFQ------------MMR------------------VKR 242
+I + NK EA ++F+ MM +K
Sbjct: 434 FTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKE 493
Query: 243 MDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR 298
MD + + TY ++ +C GK +A ++ EM +RGI+ D+++ +++I G +G
Sbjct: 494 MDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGD 553
Query: 299 LREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIM 354
+ A+ V +E+ P + Y+ L+KGL + + A ++ REM G P ++
Sbjct: 554 TKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLREMKSEGIVPNDSSFCS 613
Query: 355 LLQG 358
+++
Sbjct: 614 VIEA 617
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 137/302 (45%), Gaps = 38/302 (12%)
Query: 144 EMLNKVVKTLCQRKLVVEAKY--LILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWN 201
++L +VV T RK V + L+L + I + ++++ YC + + EA + +
Sbjct: 124 QLLKEVVST---RKNSVRDLFDELVLAHDRLQTKSTILFDFMVRFYCQLRMVDEAIECFY 180
Query: 202 LMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD-DLGLSTYRIVIDWMCK 260
LM ++GF+P + + ++ ++N+ + A + M RM+ + T+ I+I+ +CK
Sbjct: 181 LMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADMY--RMEIKSNVYTFNIMINVLCK 238
Query: 261 RGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISL 316
GK+ +A L M GI+ +T ++++ G RGR+ A ++ E++ +PD+
Sbjct: 239 EGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQT 298
Query: 317 YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDT 376
Y+ ++ + RA E V REM G P +Y
Sbjct: 299 YNPILSWMCNEGRASE---VLREMKGIGLVPDSVSY-----------------------N 332
Query: 377 IFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREV 436
I + G G A Y + ++ +G+ + YN +H E + E + +++RE
Sbjct: 333 ILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREK 392
Query: 437 GL 438
G+
Sbjct: 393 GI 394
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 186/407 (45%), Gaps = 35/407 (8%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKS----RNIDLFWETLQEMGRRRLVNDKTFKIA 114
FF + + Q + H+ ++N ++DI+ KS R ++ + L LV TFKI
Sbjct: 13 FFDWAGE-QDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLV---TFKIL 68
Query: 115 LMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWI 173
+ + + + + F +++ + + N ++ L + +A L + S +
Sbjct: 69 IRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRV 128
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVV--DKMIETFFKINKDDEA 231
KP + Y +I G C G+L +A ++ M +G + + D+V + +I F++ ++ EA
Sbjct: 129 KPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREA 188
Query: 232 MKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
+ M+ ++ L T I++ +CK G + +A +L+ M G D +T +SII+
Sbjct: 189 CAFREKMKAAGINPDVL-TCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIH 247
Query: 292 GLLARGRLREAYKVVEEIE-KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
L G++ EA ++++ + PD+ ++ L+ G + A +V EM + P +
Sbjct: 248 ALCVAGKVVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVI 307
Query: 351 TYIMLLQGHLGKRG-------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVER 397
TY +L+ G L + G R+G P V T V GL K+G+ +A K V+
Sbjct: 308 TYTILVNG-LCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKE 366
Query: 398 VMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLADI 444
+ RG Y+ + Y V K RE+ LA++ I
Sbjct: 367 MSVRGCRTGVVMYSSLVSGYCRAGNV-------HKAREI-LAEMVSI 405
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 167/379 (44%), Gaps = 30/379 (7%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+T N +V I K +++ E L M V D T+ + L K+V I
Sbjct: 205 LTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVA---GKVVEAAEI 261
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGD 192
+ C L N ++ C+ ++ A ++ ++ E I P+ I Y L+ G C VG
Sbjct: 262 LKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQ 321
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ A + + +G+ P + +++ K + +EA K+ + M V R G+ Y
Sbjct: 322 VQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSV-RGCRTGVVMYS 380
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK- 311
++ C+ G + +A +L EM + T + ++ GL+ G + +A ++ ++
Sbjct: 381 SLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVAR 440
Query: 312 ---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG--HLGK---- 362
PD+ Y+ LI GL + R REA + EM RGC P T ++ G +G+
Sbjct: 441 GYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDA 500
Query: 363 --------RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
R R P+ +V T + GL K+ + DA ++ + +GV + F Y K +
Sbjct: 501 WSLVVEMSRKRHAPNVVVY--TSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLI 558
Query: 415 HYYSN----EEGVVMFEEV 429
S+ E + M++E+
Sbjct: 559 VSMSHGGRVAEAMAMYDEM 577
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 118/258 (45%), Gaps = 20/258 (7%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
I P+ + L+ G C GD+ EA +I + M G P + + +I K EA
Sbjct: 200 INPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAA 259
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
++ + M L T+ ++D CK G + +A +LEEM + I D +T + ++ G
Sbjct: 260 EILKTMSCSP----DLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNG 315
Query: 293 LLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
L G+++ A+ ++EEI + PD+ Y L+ GL + EA ++ +EM RGC
Sbjct: 316 LCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTG 375
Query: 349 MHTYIMLLQGHLGK----RGRKGPDPLVNFD--------TIFVGGLVKAGKSLDAAKYVE 396
+ Y L+ G+ + R+ +V+ + I +GGL+K G A +
Sbjct: 376 VVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLIS 435
Query: 397 RVMNRGVEVPRFDYNKFL 414
++ RG YN +
Sbjct: 436 DLVARGYVPDVVTYNTLI 453
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 98/215 (45%), Gaps = 7/215 (3%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+ ++ +V ++ N+ E L EM +V T+ I L L + + K V+
Sbjct: 377 VMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISD 436
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGD 192
+ G + N ++ LC+ V EA L ++ S PN++ G ++ G C VG
Sbjct: 437 LVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGR 496
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK--RMDDLGLST 250
+ +A + M+ + P++ V +I+ K ++ D+A V MR + +DD
Sbjct: 497 VDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDF---A 553
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
YR +I M G++++A M +EM RG D T
Sbjct: 554 YRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGST 588
>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
Length = 428
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 133/311 (42%), Gaps = 32/311 (10%)
Query: 111 FKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS 170
+ + L + R+ + + H+M G + S+ ++ LC+ + A+ L+ K++
Sbjct: 13 YNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMA 72
Query: 171 E-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD 229
+ PN + Y LI G C +A + M G EP + + +I N+ D
Sbjct: 73 DAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMD 132
Query: 230 EAMKVFQ--MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLS 287
+A V Q M+ R+ D+ TY I +CK GK+ + MLEEM + GI D +T
Sbjct: 133 DAGLVLQELMIESGRIPDV--VTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFC 190
Query: 288 SIIYGLLARGRLREAYKV----VEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
SII GL R+ +A++V +E PD Y ++ L R R +V M+K
Sbjct: 191 SIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKS 250
Query: 344 GCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
G TY PL++ L++AG A+ E+ M G
Sbjct: 251 GHYALSATYA----------------PLIH-------ALIRAGDIESASWAYEQAMEAGC 287
Query: 404 EVPRFDYNKFL 414
+ + +N F+
Sbjct: 288 VMEVYTHNAFI 298
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 152/364 (41%), Gaps = 28/364 (7%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHI 133
+T+ ++D + KS ++D LQ+M N T+ + L + R +
Sbjct: 46 VTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKR 105
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI--LKLSEWIKPNEIAYGWLIKGYCDVG 191
M GCE L N ++ LC + +A ++ L + P+ + Y I G C G
Sbjct: 106 MLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAG 165
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM--RVKRMDDLGLS 249
L + ++ M G P + +I K N+ D+A +VF+ M R D L
Sbjct: 166 KLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSL--- 222
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
TY I++D + + ++ +LE M K G A + T + +I+ L+ G + A E+
Sbjct: 223 TYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQA 282
Query: 310 EKP----DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG- 364
+ ++ ++ I L R + A + MI+ G P + +Y ++ G L K G
Sbjct: 283 MEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDG-LCKSGN 341
Query: 365 --------RKGPD-----PLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPR-FDY 410
RK D P V F + G KAG+ A + ++ + + + VP Y
Sbjct: 342 VDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTY 401
Query: 411 NKFL 414
N +
Sbjct: 402 NTMI 405
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 98/209 (46%), Gaps = 3/209 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRR-RLVNDKTFKIALMTLAEVRELKKMVNFF 131
+S+T++ M+D + ++ +D E L+ M + T+ + L +++ +
Sbjct: 220 DSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAY 279
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIK-PNEIAYGWLIKGYCDV 190
+ GC + N + LC+ AK ++L + E PN ++Y ++I G C
Sbjct: 280 EQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKS 339
Query: 191 GDLIEASKIWNLMTDEGF-EPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
G++ +A K+ M D G +P + + +I F K + +A ++ + M+ K + +
Sbjct: 340 GNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVV 399
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRG 278
TY +ID K G + QA +LEEM G
Sbjct: 400 TYNTMIDGQSKFGSLKQAKLLLEEMQAVG 428
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 95/430 (22%), Positives = 182/430 (42%), Gaps = 91/430 (21%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKT-FKIALMTLAEVRELKKMVNFFHI 133
+T N ++ + ++ + L+EM + D+T F + E ++ +
Sbjct: 198 VTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAK 257
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDVGD 192
M + GC + +N ++ C+ V +A Y+ ++++ +P+++ Y + G C G
Sbjct: 258 MMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGH 317
Query: 193 LIEASKIWNLMTDEGFEPSI--------------------DVVDKMIE--------TFFK 224
+ A K+ +LM EG +P + +V++M++ TF
Sbjct: 318 VSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNT 377
Query: 225 I-------NKDDEAMKVFQMMRVKRMD-------------------DLGLS--------- 249
+ N+ +EA+ + + + VK + LG+
Sbjct: 378 LIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSG 437
Query: 250 ------TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
TY I+ID +C GK+ A +L EM G +T ++II L + R+ EA
Sbjct: 438 CTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAE 497
Query: 304 KVVEEIEKPDIS----LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
+V ++++ IS ++ LI GL + +R +AT++ +M+K G +P TY +L H
Sbjct: 498 EVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILT-H 556
Query: 360 LGKRG--RKGPDPL------------VNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEV 405
K+G +K D L V + T+ + GL KAG++ A K + + +G+
Sbjct: 557 YCKQGNIKKAADILETMTANGFEIDVVTYGTL-INGLCKAGRTQVALKLLRGMRIKGIRP 615
Query: 406 PRFDYNKFLH 415
YN +
Sbjct: 616 TPKAYNPVIQ 625
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 139/321 (43%), Gaps = 48/321 (14%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKT-FKIALMTLAEVRELKKMVNFFHIM 134
T+N +++ + K+ +D + +M R + D T F ++ L+ L++ ++ +
Sbjct: 339 TYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLAREL 398
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIK-----PNEIAYGWLIKGYCD 189
G + N ++ LC+ V +L ++L E +K P+E+ Y LI C
Sbjct: 399 TVKGLSPDVYTFNILINALCK----VGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCS 454
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM----------- 238
+G L A + N M G S + +I+ K + +EA +VF M
Sbjct: 455 MGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVT 514
Query: 239 ---------RVKRMDDL----------GLS----TYRIVIDWMCKRGKISQAYTMLEEMF 275
+ KR+DD GL TY ++ CK+G I +A +LE M
Sbjct: 515 FNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMT 574
Query: 276 KRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAR 331
G E D +T ++I GL GR + A K++ + +P Y+ +I+ L R R
Sbjct: 575 ANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLR 634
Query: 332 EATQVFREMIKRGCEPTMHTY 352
+A +FREM + G P TY
Sbjct: 635 DALNLFREMTEVGEPPDALTY 655
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 132/292 (45%), Gaps = 8/292 (2%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIM 134
TFN +++ + K + L +EM D+ T+ I + L + +L ++ + M
Sbjct: 409 TFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEM 468
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDL 193
GC S N ++ LC++ + EA+ + ++ ++ I + + + LI G C +
Sbjct: 469 ESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRI 528
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
+A+++ M EG +P+ + ++ + K +A + + M + + + TY
Sbjct: 529 DDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFE-IDVVTYGT 587
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI---- 309
+I+ +CK G+ A +L M +GI + +I L R LR+A + E+
Sbjct: 588 LINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVG 647
Query: 310 EKPDISLYHGLIKGLLRLRRA-REATQVFREMIKRGCEPTMHTYIMLLQGHL 360
E PD Y + + L R +EA EM+ +G P ++ ML +G L
Sbjct: 648 EPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLL 699
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 156/377 (41%), Gaps = 32/377 (8%)
Query: 66 AQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRR----RLVNDKTFKIALMTLAEV 121
A+ FA +S + +V +G + DL ++EM R R V ++F + + A +
Sbjct: 81 AREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVRSF---VESYARL 137
Query: 122 RELKKMVNFF--HIMNDC-GCEYSLEMLNKVVKTLCQ-RKL-VVEAKYLILKLSEWIKPN 176
R V+ + ND G + + N ++ L + KL ++E+ Y + I+P+
Sbjct: 138 RRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMT-GRGIQPD 196
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
+ LIK C + A + M+ G P +++ F + + A++V
Sbjct: 197 VVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKA 256
Query: 237 MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR 296
M G+ T ++I+ CK G++ A +++ G E D +T ++ ++GL
Sbjct: 257 KMMEAGCSPTGV-TVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQN 315
Query: 297 GRLREAYKV----VEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
G + A KV ++E PD+ Y+ +I L + EA + +M+ RGC P T+
Sbjct: 316 GHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTF 375
Query: 353 IMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVM 399
L+ L + R KG P V I + L K G + E +
Sbjct: 376 NTLIVA-LSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMK 434
Query: 400 NRGVEVPRFDYNKFLHY 416
+ G YN + +
Sbjct: 435 SSGCTPDEVTYNILIDH 451
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 118/282 (41%), Gaps = 49/282 (17%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMV 128
+ +++TFN ++D + K++ ID E +++M + L N+ T+ L + +KK
Sbjct: 508 ISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAA 567
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYC 188
+ M G E + + YG LI G C
Sbjct: 568 DILETMTANGFEIDV----------------------------------VTYGTLINGLC 593
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLG 247
G A K+ M +G P+ + +I++ F+ N +A+ +F +M V D
Sbjct: 594 KAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPD-- 651
Query: 248 LSTYRIVIDWMCK-RGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR---LREAY 303
TY+IV +C+ G I +A+ L EM +G + + + GLL G L A
Sbjct: 652 ALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLGMDDYLISAI 711
Query: 304 KVVEEIEK---PDISLYHGLIKGLLRLRRAREATQVFREMIK 342
+++ E K D S I+G L++R+ +A F +++
Sbjct: 712 ELIIEKAKFRESDAS----AIRGYLKIRKYYDALATFGRLLE 749
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 18/207 (8%)
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV---- 305
T +I +C+ ++ A MLEEM G+ D T ++++ G + G + A +V
Sbjct: 199 TLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKM 258
Query: 306 VEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG- 364
+E P + LI G ++ R +A ++ I G EP TY + G L + G
Sbjct: 259 MEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHG-LCQNGH 317
Query: 365 ------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNK 412
++G DP V + L K G+ +A V ++++RG +N
Sbjct: 318 VSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNT 377
Query: 413 FLHYYSNEEGVVMFEEVGKKLREVGLA 439
+ S++ + ++ ++L GL+
Sbjct: 378 LIVALSSQNRLEEALDLARELTVKGLS 404
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 141/300 (47%), Gaps = 8/300 (2%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAE 120
Y K C + T+N +D +GKS I ++ +EM R N T I + L +
Sbjct: 812 YKMKNAGC-TPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVK 870
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIA 179
L K ++ ++ + + ++ L + + EAK ++ ++ PN
Sbjct: 871 SNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPL 930
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
Y L+ G+ GD+ A +++ M EG P + M++ + K D+A+ F+ ++
Sbjct: 931 YNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELK 990
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
+ +D L Y ++I+ + + ++ +A ++ +EM RGI D T +++I L G +
Sbjct: 991 LSGLDP-DLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMV 1049
Query: 300 REAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
EA K+ EE++ +P++ Y+ LI+G A V+++M+ GC P T+ L
Sbjct: 1050 EEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 126/273 (46%), Gaps = 32/273 (11%)
Query: 183 LIKGYCDVGDLIEASKIWNLMTDE-GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK 241
L+K C G ++A ++ +T PS++ + +I+ K + A +F
Sbjct: 758 LVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFY----- 812
Query: 242 RMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
+M + G + TY + +D + K GKI + + + EEM RG + + +T + +I+GL+
Sbjct: 813 KMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSN 872
Query: 298 RLREAYKVVEEIEKPDIS----LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYI 353
L +A + ++ D S Y LI GLL+L R EA Q F EM+ GC P Y
Sbjct: 873 SLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYN 932
Query: 354 MLLQGHLGKRG-------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMN 400
+L+ G GK+G ++G P + +I V L GK DA Y E +
Sbjct: 933 ILMNG-FGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKL 991
Query: 401 RGVEVPRFDYNKFLHYYSN----EEGVVMFEEV 429
G++ YN ++ EE + +F+E+
Sbjct: 992 SGLDPDLVCYNLMINGLGRSQRVEEALSLFDEM 1024
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 133/321 (41%), Gaps = 71/321 (22%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIM 134
T++ ++ +GK R+I+ LQEM L N TF I + L ++ + M
Sbjct: 229 TYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRM 288
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDL 193
+D GC + ++ LC + AK L LK+ + KP+ + Y L+ + D GDL
Sbjct: 289 DDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDL 348
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
+ W+ M +G+ P DVV T+ I
Sbjct: 349 DAIKEFWSEMEADGYLP--DVV----------------------------------TFTI 372
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPD 313
+ID +CK GK+ +A+ L+ M K+G+ + T +++I GL
Sbjct: 373 LIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGL-------------------- 412
Query: 314 ISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVN 373
LRL R EA ++F M G E T +TYI+ + + GK G G +
Sbjct: 413 -----------LRLNRLDEALELFNSMESLGLETTAYTYILFID-YYGKSGESG-KAIKT 459
Query: 374 FDTIFVGGLVKAGKSLDAAKY 394
F+ + G+V + +A+ Y
Sbjct: 460 FEKMKTNGIVPNIVACNASLY 480
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 148/352 (42%), Gaps = 57/352 (16%)
Query: 69 CFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKM 127
C + +N ++D + K+R ++ W +M D T+ + L L + ++K++
Sbjct: 783 CITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKEL 842
Query: 128 VNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKG 186
+ + M GC+ + N V+ L + + +A L L S P YG LI G
Sbjct: 843 FDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDG 902
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
+G L EA + + M D G P+ + + ++ F K + A ++F+ M VK
Sbjct: 903 LLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRM-VKEGIRP 961
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
L +Y I++D +C GK+ A EE+ G++
Sbjct: 962 DLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLD-------------------------- 995
Query: 307 EEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK 366
PD+ Y+ +I GL R +R EA +F EM RG P ++TY L+ +LG
Sbjct: 996 -----PDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALIL-NLG----- 1044
Query: 367 GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYS 418
+ G+V+ +A K E + +G+E F YN + +S
Sbjct: 1045 ------------IAGMVE-----EAGKMYEELQLKGLEPNVFTYNALIRGHS 1079
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 142/301 (47%), Gaps = 9/301 (2%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVN 129
A N T+N ++ + + +D E M L T+ + + + E K +
Sbjct: 399 APNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIK 458
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYC 188
F M G ++ N + +L ++ + EAK L + + P+ I Y L++ Y
Sbjct: 459 TFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYG 518
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
G + +A K+ + M + G +P + +++ +I+T +K ++ DEA K+FQ M+ ++ +
Sbjct: 519 KAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPT-V 577
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY ++ + K G++ +A + + M + ++ ++++ L G + A K++
Sbjct: 578 VTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFR 637
Query: 309 IEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
+ + PD+ Y+ +I GL++ R A +F +M K+ P T LL G + K G
Sbjct: 638 MTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQM-KKVIYPDYVTLCTLLPGVI-KDG 695
Query: 365 R 365
R
Sbjct: 696 R 696
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 92/208 (44%), Gaps = 19/208 (9%)
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
++ + VF +M+ K++ ++TY + + RG + +A LE+M K G + +
Sbjct: 139 EDMVVVFNLMQ-KQIIKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYIG 197
Query: 289 IIYGLLARGRLREAYKV----VEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+I+ LL G REA KV V E KP + Y L+ L + R + +EM G
Sbjct: 198 LIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLG 257
Query: 345 CEPTMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDA 391
P ++T+ + ++ LG+ G+ G P V T+ + L AGK +A
Sbjct: 258 LRPNIYTFTICIR-ILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNA 316
Query: 392 AKYVERVMNRGVEVPRFDYNKFLHYYSN 419
+ ++ + R Y L +S+
Sbjct: 317 KELFLKMKASSHKPDRVTYITLLDKFSD 344
>gi|302776342|ref|XP_002971343.1| hypothetical protein SELMODRAFT_411983 [Selaginella moellendorffii]
gi|300161325|gb|EFJ27941.1| hypothetical protein SELMODRAFT_411983 [Selaginella moellendorffii]
Length = 584
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 152/342 (44%), Gaps = 33/342 (9%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIM 134
+TF M+ K+R ++ WE QEM + F ++ +EL +M ++
Sbjct: 131 VTFTVMIRGFCKNRMMERAWEIFQEMIKSNRCQPDCFLYGVLIDGYCKEL-RMDRALELL 189
Query: 135 NDCGCEYSLE----MLNKVVKTLCQRKLVVEA-KYLILKLS-EWIKPNEIAYGWLIKGYC 188
+ E ++ + N +V LC+ +EA K+L + + P + Y LI+G C
Sbjct: 190 REMRVERRIQPDVVIYNSIVDGLCRSNRFLEAWKFLDETMVLQGCSPTVVTYTSLIRGAC 249
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG- 247
+ A +IWN M + +P+I +I+ K + +A +V V+ M+ LG
Sbjct: 250 KAKKMKLAVRIWNAMLERKIQPTIVSYSVIIDGLSKAGRVYDAYRV-----VREMETLGC 304
Query: 248 ---LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK 304
+ Y +ID +CK G + AY + M + G + T +++I R A
Sbjct: 305 ELNVVIYTTLIDGLCKSGFLDDAYALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALG 364
Query: 305 VVEEIEK--P-DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL- 360
+ + I P D+++Y ++ GL R RR +A +FREM G H Y +LL G
Sbjct: 365 LFDHIRDYCPLDVAMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHGAFR 424
Query: 361 GKRGRK--------GPDP-----LVNFDTIFVGGLVKAGKSL 389
+R + G DP L+ ++T+ G +++G L
Sbjct: 425 SERPEEAFRILEELGDDPGCVANLLTYNTVIAGCCLESGMVL 466
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 116/251 (46%), Gaps = 21/251 (8%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
PN+ A+ LI L +A++ LM D G P + MI F K + A ++
Sbjct: 93 PNQHAFASLIDALSKSTRLADAARALELMRDAGIHPDVVTFTVMIRGFCKNRMMERAWEI 152
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEM-FKRGIEADNLTLSSIIYGL 293
FQ M Y ++ID CK ++ +A +L EM +R I+ D + +SI+ GL
Sbjct: 153 FQEMIKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGL 212
Query: 294 LARGRLREAYKVVEEIE-----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
R EA+K ++E P + Y LI+G + ++ + A +++ M++R +PT
Sbjct: 213 CRSNRFLEAWKFLDETMVLQGCSPTVVTYTSLIRGACKAKKMKLAVRIWNAMLERKIQPT 272
Query: 349 MHTYIMLLQGHLGKRGRK-------------GPDPLVNFDTIFVGGLVKAGKSLDAAKYV 395
+ +Y +++ G L K GR G + V T + GL K+G LD A +
Sbjct: 273 IVSYSVIIDG-LSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSG-FLDDAYAL 330
Query: 396 ERVMNRGVEVP 406
R+M R P
Sbjct: 331 YRIMKRSGAFP 341
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 148/349 (42%), Gaps = 28/349 (8%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
N F + L++ L +M D G + +++ C+ +++ A +
Sbjct: 94 NQHAFASLIDALSKSTRLADAARALELMRDAGIHPDVVTFTVMIRGFCKNRMMERAWEIF 153
Query: 167 LKL--SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLM-TDEGFEPSIDVVDKMIETFF 223
++ S +P+ YG LI GYC + A ++ M + +P + + + +++
Sbjct: 154 QEMIKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGLC 213
Query: 224 KINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADN 283
+ N+ EA K V + + TY +I CK K+ A + M +R I+
Sbjct: 214 RSNRFLEAWKFLDETMVLQGCSPTVVTYTSLIRGACKAKKMKLAVRIWNAMLERKIQPTI 273
Query: 284 LTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFRE 339
++ S II GL GR+ +AY+VV E+E + ++ +Y LI GL + +A ++R
Sbjct: 274 VSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALYRI 333
Query: 340 MIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFD-------------TIFVGGLVKAG 386
M + G P TY L+ R + L FD T V GL +
Sbjct: 334 MKRSGAFPNQRTYATLIDTFC--RNDRTETALGLFDHIRDYCPLDVAMYTAVVSGLCRE- 390
Query: 387 KSLDAAKYVERVMN-RGVEVPRFDYNKFLH--YYSN--EEGVVMFEEVG 430
+ LD A+ + R M GV YN LH + S EE + EE+G
Sbjct: 391 RRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSERPEEAFRILEELG 439
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/312 (19%), Positives = 126/312 (40%), Gaps = 41/312 (13%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK--TFKIALMTLAEVRELKKMVNFFH 132
+ +N +VD + +S W+ L E + + T+ + + +++K V ++
Sbjct: 203 VIYNSIVDGLCRSNRFLEAWKFLDETMVLQGCSPTVVTYTSLIRGACKAKKMKLAVRIWN 262
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVG 191
M + + ++ + ++ L + V +A ++ ++ + N + Y LI G C G
Sbjct: 263 AMLERKIQPTIVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSG 322
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTY 251
L +A ++ +M G P+ +I+TF + ++ + A+ +F +R L ++ Y
Sbjct: 323 FLDDAYALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHIR--DYCPLDVAMY 380
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE- 310
V+ +C+ ++ A + EM G+ AD + +++G R EA++++EE+
Sbjct: 381 TAVVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSERPEEAFRILEELGD 440
Query: 311 -----------------------------------KPDISLYHGLIKGLLRLRRAREATQ 335
PD + Y LI LL A
Sbjct: 441 DPGCVANLLTYNTVIAGCCLESGMVLFYEMRQRGIAPDFATYSALIDRLLGSGEIGRAFD 500
Query: 336 VFREMIKRGCEP 347
+ EM+ G P
Sbjct: 501 LCEEMLASGLSP 512
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 79/168 (47%), Gaps = 23/168 (13%)
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNL-TLSSIIYGLLARGRLREAYKVVEEIEK 311
+VID CK G + A +L M G N +S+I L RL +A + +E +
Sbjct: 64 VVIDRACKSGDLRGALLILATMLHSGTPPPNQHAFASLIDALSKSTRLADAARALELMRD 123
Query: 312 ----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG-CEPTMHTYIMLLQGHLGK---- 362
PD+ + +I+G + R A ++F+EMIK C+P Y +L+ G+ +
Sbjct: 124 AGIHPDVVTFTVMIRGFCKNRMMERAWEIFQEMIKSNRCQPDCFLYGVLIDGYCKELRMD 183
Query: 363 -----------RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVM 399
R PD +V +++I V GL ++ + L+A K+++ M
Sbjct: 184 RALELLREMRVERRIQPD-VVIYNSI-VDGLCRSNRFLEAWKFLDETM 229
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/263 (20%), Positives = 106/263 (40%), Gaps = 17/263 (6%)
Query: 64 QKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVR 122
+K QP ++++ ++D + K+ + + ++EM +N + + L +
Sbjct: 267 RKIQPTI----VSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSG 322
Query: 123 ELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGW 182
L + IM G + ++ T C+ A L + ++ + Y
Sbjct: 323 FLDDAYALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHIRDYCPLDVAMYTA 382
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
++ G C L +A ++ M G + ++ F+ + +EA ++ + +
Sbjct: 383 VVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSERPEEAFRILEELG--- 439
Query: 243 MDDLG----LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR 298
DD G L TY VI C + + EM +RGI D T S++I LL G
Sbjct: 440 -DDPGCVANLLTYNTVIAGCC----LESGMVLFYEMRQRGIAPDFATYSALIDRLLGSGE 494
Query: 299 LREAYKVVEEIEKPDISLYHGLI 321
+ A+ + EE+ +S G++
Sbjct: 495 IGRAFDLCEEMLASGLSPPSGVL 517
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 96/237 (40%), Gaps = 7/237 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRR-RLVNDKTFKIALMTLAEVRELKKMVNFF 131
N + + ++D + KS +D + + M R N +T+ + T + + F
Sbjct: 307 NVVIYTTLIDGLCKSGFLDDAYALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLF 366
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDV 190
+ D C + M VV LC+ + + +A+ L ++ + + AY L+ G
Sbjct: 367 DHIRDY-CPLDVAMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHGAFRS 425
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
EA +I + D+ P T + M +F MR +R +T
Sbjct: 426 ERPEEAFRILEELGDD---PGCVANLLTYNTVIAGCCLESGMVLFYEMR-QRGIAPDFAT 481
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
Y +ID + G+I +A+ + EEM G+ + L ++ L R A KV+E
Sbjct: 482 YSALIDRLLGSGEIGRAFDLCEEMLASGLSPPSGVLGRVVARLCWSRRGDLAAKVIE 538
>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
Length = 543
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 165/352 (46%), Gaps = 25/352 (7%)
Query: 73 NSITFNRMVDIIGKSRN---IDLFWETLQEMGRRRLVNDKTFKI-ALMTLAEVRELKKMV 128
N++ +N ++D + ++ + E ++ G V T + +L T ++ +++ +V
Sbjct: 166 NALCYNSLLDCYVRRKDDARVQELLEIMENGGIEATVGTYTILVDSLSTAGDISKVEAVV 225
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGY 187
+ N G Y + V+ C+ V A + + + I+PNE YG LI G+
Sbjct: 226 DEMKAKNVAGDVY---LYTAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGVLINGF 282
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C +G + A + M G + + + MI+ + + D A+KV M K +L
Sbjct: 283 CKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMVDNALKVKAAME-KMGIELD 341
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
+ TY + +C+ ++++A T+L M ++G+ + +T +++I G + EA ++
Sbjct: 342 VYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFR 401
Query: 308 EIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL--G 361
E+ P + Y+ ++ G ++ REA + +EM K+G P ++TY L+ GH G
Sbjct: 402 EMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNG 461
Query: 362 K----------RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
K +G +P V T + GL K G+S +A + + ++ G+
Sbjct: 462 KVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEAFQLYDDMLKAGL 513
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 109/238 (45%), Gaps = 42/238 (17%)
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGD 192
M G E + N + LC+ + EAK L+ + + + + PN + Y LI +C GD
Sbjct: 333 MEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGD 392
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
++EA +++ M +G PS+ TY
Sbjct: 393 MVEARRLFREMAGKGAMPSV------------------------------------VTYN 416
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
+++D K+G I +A +EM K+G+ D T +S+++G G++ A K+ EE++
Sbjct: 417 VMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHR 476
Query: 311 --KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK 366
+P++ Y LI GL + R+ EA Q++ +M+K G P Y L+ G L RK
Sbjct: 477 GTEPNVVAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALV-GSLHTDNRK 533
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 84/213 (39%), Gaps = 53/213 (24%)
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKR----------------------------------- 277
+V+D CK G++ A +L+EM +
Sbjct: 137 VVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIMENG 196
Query: 278 GIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP----DISLYHGLIKGLLRLRRAREA 333
GIEA T + ++ L G + + VV+E++ D+ LY +I R R A
Sbjct: 197 GIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRRA 256
Query: 334 TQVFREMIKRGCEPTMHTYIMLLQG--HLGK-----------RGRKGPDPLVNFDTIFVG 380
++VF E + G EP TY +L+ G +G+ +GR + F+T+ +
Sbjct: 257 SEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTM-ID 315
Query: 381 GLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
G + G +A K + G+E+ + YN
Sbjct: 316 GYCRQGMVDNALKVKAAMEKMGIELDVYTYNTL 348
>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
Length = 439
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 166/386 (43%), Gaps = 67/386 (17%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
N TF+ ++ + K+ + E +M R V N + + L +L + ++ + + F
Sbjct: 2 NRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAIF 61
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE--WIKPNEIAYGWLIKGYCD 189
+ C S+ LN ++ C+ +L+ +A L ++ + + P Y +IK YC
Sbjct: 62 RGIQ---CSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCK 118
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVV--DKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
+ L +A ++ +E S DV+ + F K + DEA ++ M K+
Sbjct: 119 MDRLDQARQLL----EESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPD 174
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGI---------------------------- 279
+ + ++I CK G++ +AY MLE + G
Sbjct: 175 IVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFK 234
Query: 280 ---------EADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLR 326
E + +T +++I GL RL A+++V++++ + D Y L+ GL +
Sbjct: 235 VLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCK 294
Query: 327 LRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR-------------KGPDPLVN 373
R E ++VF EM++ GC P++ TY L+ H K G KG P V
Sbjct: 295 QGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHC-KAGSLQDAQQVIRSMVAKGIPPDVT 353
Query: 374 FDTIFVGGLVKAGKSLDAAKYVERVM 399
T+ + GL + GK A ++ E+++
Sbjct: 354 TYTVLLEGLFENGKVRTATEFFEKIL 379
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 122/292 (41%), Gaps = 55/292 (18%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
PN + LI G C G L EA + +N M + P++ ++ ++ + + K D+AM +
Sbjct: 1 PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60
Query: 235 FQMMRVK----------------RMDDLGL----------------STYRIVIDWMCKRG 262
F+ ++ ++ D L +TY +I CK
Sbjct: 61 FRGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMD 120
Query: 263 KISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI-----EKPDISLY 317
++ QA +LEE +D + ++S+ G R+ EAY+++ ++ KPDI +
Sbjct: 121 RLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAW 178
Query: 318 HGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH---------------LGK 362
+ +I G + R REA ++ ++ GC P TY L+ G L
Sbjct: 179 NVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSS 238
Query: 363 RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
R +V F+ + + GL KA + A + V+++ R + F Y +
Sbjct: 239 RDHHAEPNVVTFNAL-ISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLM 289
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 118/263 (44%), Gaps = 48/263 (18%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT- 204
N ++ C+ V EA ++ L S PN + Y LI G+C G+L EA +++ +++
Sbjct: 179 NVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSS 238
Query: 205 -DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK--RMDDLGLSTYRIVIDWMCKR 261
D EP++ + +I K ++ + A ++ + M+ + R D TY ++D +CK+
Sbjct: 239 RDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTF---TYTTLMDGLCKQ 295
Query: 262 GKISQAYTMLEEMFK-----------------------------------RGIEADNLTL 286
G+ S+ + EEM + +GI D T
Sbjct: 296 GRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTY 355
Query: 287 SSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIK 342
+ ++ GL G++R A + E+I + P +Y L++G + EA + + EM+
Sbjct: 356 TVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLD 415
Query: 343 RGCEPTMHTYIMLLQGHLGKRGR 365
R P T +L++ L KRGR
Sbjct: 416 RRLAPDPATCKLLVE-MLCKRGR 437
>gi|147772266|emb|CAN67349.1| hypothetical protein VITISV_018089 [Vitis vinifera]
Length = 483
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 107/217 (49%), Gaps = 6/217 (2%)
Query: 146 LNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
LN V+ C+ + +A + K+ P +Y LI GYC+ G L K+ LM
Sbjct: 184 LNMVMCAFCKWGKLEKAIEVFKKMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILME 243
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
G P + +I F + K EA K+F M+ + + TY +I+ + G
Sbjct: 244 KNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTI-TYNTLINGYSQVGNS 302
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGL 320
+ +EM + GI+AD LT +++I GL GR ++A +V+E+++ P+ S + L
Sbjct: 303 EMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSAL 362
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
I G + + A Q+++ MI+ GC P HT+ ML+
Sbjct: 363 ITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLIS 399
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 114/290 (39%), Gaps = 40/290 (13%)
Query: 91 DLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKV 149
D+ +EM R R+ N T + + + +L+K + F M G ++ N +
Sbjct: 163 DIALTFYREMQRYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKKMETMGFSPTITSYNTL 222
Query: 150 VKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGF 208
+ C + L+ K IL ++P+++ + LI G+C G L EA+KI++ M
Sbjct: 223 IAGYCNKGLLNSGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDV 282
Query: 209 EPSIDVVDKMIETFFKINKDDEAMKVF-QMMR---------------------------- 239
P+ + +I + ++ + ++ +M+R
Sbjct: 283 VPNTITYNTLINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAY 342
Query: 240 -VKRMDDLGL----STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
VK +D L ST+ +I C R +A+ + + M + G + T +I
Sbjct: 343 LVKELDRENLVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTFC 402
Query: 295 ARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREM 340
A +VV E+ + PD L +GL + A ++ +EM
Sbjct: 403 KNEDFDGAVEVVREMSERSIAPDSDTLSELCRGLWLSGKEELALKLCKEM 452
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 63/142 (44%), Gaps = 1/142 (0%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
L IK + + Y LI G C G +A+ + + E P+ +I
Sbjct: 313 LRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNS 372
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
+ A ++++ M ++ T++++I CK A ++ EM +R I D+ TLS
Sbjct: 373 ERAFQLYKSM-IRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIAPDSDTLSE 431
Query: 289 IIYGLLARGRLREAYKVVEEIE 310
+ GL G+ A K+ +E+E
Sbjct: 432 LCRGLWLSGKEELALKLCKEME 453
>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
Length = 721
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 150/319 (47%), Gaps = 25/319 (7%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALM-TLAEVRELKKMV 128
F ++ T+++++ + + ++ ++ QEM R + D L+ + + +++
Sbjct: 218 FIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQAR 277
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGY 187
N+F M GC ++ ++ + + V +A + + LS+ PN + Y LI G
Sbjct: 278 NWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGL 337
Query: 188 CDVGDLIEASKIWNLMTDEGFE-PSID----VVD------------KMIETFFKINKDDE 230
C G + +AS+I+ +M E E P +D VVD +++ K + E
Sbjct: 338 CKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKE 397
Query: 231 AMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
A + + M V+ + + Y +ID CK GK+ +A + M + G + + T SS+I
Sbjct: 398 ARDLLKSMSVEGCEPNHV-VYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLI 456
Query: 291 YGLLARGRLREAYKVV----EEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
L RL A KV+ E P++ +Y +I GL ++ + EA ++ M ++GC
Sbjct: 457 DRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCN 516
Query: 347 PTMHTYIMLLQGHLGKRGR 365
P + TY ++ G GK GR
Sbjct: 517 PNVVTYTAMIDG-FGKSGR 534
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 163/376 (43%), Gaps = 50/376 (13%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRR----LVNDKTFKIALMTLAEVRELK 125
F +++ + +M+ + ++ LF E + + R R L N T++I L +L
Sbjct: 38 FVPDTVLYTKMISGLCEA---SLFEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLG 94
Query: 126 KMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLI 184
+ +M GC S + N +V C+ A L+ K+ + +P + Y LI
Sbjct: 95 RCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILI 154
Query: 185 KGYC-------DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-Q 236
G C DV DL A K + M + G + + I K ++A V +
Sbjct: 155 GGICSSEEPGKDVLDL--AEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIRE 212
Query: 237 MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR 296
MM + D STY VI ++C K+ +A+ + +EM + GI D +++I
Sbjct: 213 MMSKGFIPDT--STYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKA 270
Query: 297 GRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
G + +A +E+E+ P++ Y LI L+ R+ +A +V+ M+ +GC P + TY
Sbjct: 271 GFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTY 330
Query: 353 IMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNR-GVEVPRFDYN 411
T + GL KAGK ++ A + ++M + VE+P D +
Sbjct: 331 -----------------------TALIDGLCKAGK-IEKASQIYKIMKKENVEIPDVDMH 366
Query: 412 -KFLHYYSNEEGVVMF 426
+ + SNE V +
Sbjct: 367 FRVVDGASNEPNVFTY 382
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 138/318 (43%), Gaps = 25/318 (7%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMV 128
A + + ++D K+ I+ EM R N T+ + + R++ K
Sbjct: 253 IAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKAN 312
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAK--YLILKL----------------S 170
+ +M GC ++ ++ LC+ + +A Y I+K
Sbjct: 313 EVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDG 372
Query: 171 EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDE 230
+PN YG L+ G C + EA + M+ EG EP+ V D +I+ K K DE
Sbjct: 373 ASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDE 432
Query: 231 AMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
A +VF M ++ D + TY +ID + K ++ A +L +M + + + + +I
Sbjct: 433 AQEVFTTM-LECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMI 491
Query: 291 YGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
GL G+ EAYK++ +E+ P++ Y +I G + R + ++ ++M +GC
Sbjct: 492 DGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCA 551
Query: 347 PTMHTYIMLLQGHLGKRG 364
P TY +L+ H G
Sbjct: 552 PNFVTYRVLIN-HCCSTG 568
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 132/293 (45%), Gaps = 24/293 (8%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVN 129
A N +T+ ++ KSR + E + M + N T+ + L + +++K
Sbjct: 289 APNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQ 348
Query: 130 FFHIM-----------------NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-E 171
+ IM + E ++ +V LC+ V EA+ L+ +S E
Sbjct: 349 IYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVE 408
Query: 172 WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEA 231
+PN + Y LI G C G L EA +++ M + G++P++ +I+ FK + D A
Sbjct: 409 GCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLA 468
Query: 232 MKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
+KV M ++ + Y +ID +CK GK +AY ++ M ++G + +T +++I
Sbjct: 469 LKVLSKM-LENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMID 527
Query: 292 GLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREM 340
G GR+ + ++++++ P+ Y LI EA ++ EM
Sbjct: 528 GFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEM 580
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 143/329 (43%), Gaps = 42/329 (12%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVNFF 131
N T+ +VD + K+ + + L+ M + AL+ + +L + F
Sbjct: 378 NVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVF 437
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQ-RKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDV 190
M +CG + ++ + ++ L + ++L + K L L PN + Y +I G C V
Sbjct: 438 TTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKV 497
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G EA K+ +M ++G P++ MI+ F K + ++ +++ Q M K T
Sbjct: 498 GKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAP-NFVT 556
Query: 251 YRIVIDWMCKRGKISQAYTMLEEM-----------FKRGIEADNLTLSSIIY-------- 291
YR++I+ C G + +A+ +LEEM +++ IE N + +Y
Sbjct: 557 YRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGFNREFIASLYLSFEISEN 616
Query: 292 --------------GLLARGRLREAYKVVEEIEK------PDISLYHGLIKGLLRLRRAR 331
+ GRL A ++ EE+ + +++ LI+ L +A
Sbjct: 617 DSVPVAPVYRVLIDNFIKAGRLEIALELNEELSSFSPFSAANQNIHITLIENLSLAHKAD 676
Query: 332 EATQVFREMIKRGCEPTMHTYIMLLQGHL 360
+A +++ +MI RG P + + L++G L
Sbjct: 677 KAFELYADMISRGSIPELSILVHLIKGLL 705
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 115/295 (38%), Gaps = 34/295 (11%)
Query: 145 MLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLM 203
+ K++ LC+ L EA + ++ + PN + Y L+ G + L +I ++M
Sbjct: 44 LYTKMISGLCEASLFEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMM 103
Query: 204 TDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKR-- 261
EG PS + + ++ + + A K+ + M V+ G Y I+I +C
Sbjct: 104 ITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKM-VQCGCQPGYVVYNILIGGICSSEE 162
Query: 262 -GK--ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDI 314
GK + A EM + G+ + + +S+ L G+ +AY V+ E+ PD
Sbjct: 163 PGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDT 222
Query: 315 SLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNF 374
S Y +I L + +A Q+F+EM + G P ++ Y
Sbjct: 223 STYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVY---------------------- 260
Query: 375 DTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEV 429
T + KAG A + + + G Y +H Y V EV
Sbjct: 261 -TTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEV 314
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 127/285 (44%), Gaps = 13/285 (4%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAE 120
+T + + N T++ ++D + K + +DL + L +M + ++ L +
Sbjct: 437 FTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCK 496
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIA 179
V + + +M + GC ++ ++ + V + L+ ++S + PN +
Sbjct: 497 VGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVT 556
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
Y LI C G L EA K+ M + + K+IE F N++ A ++
Sbjct: 557 YRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGF---NREFIA-SLYLSFE 612
Query: 240 VKRMDDLGLS-TYRIVIDWMCKRGKISQAYTMLEEM--FKRGIEADNLTLSSIIYGLLAR 296
+ D + ++ YR++ID K G++ A + EE+ F A+ ++I L
Sbjct: 613 ISENDSVPVAPVYRVLIDNFIKAGRLEIALELNEELSSFSPFSAANQNIHITLIENLSLA 672
Query: 297 GRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVF 337
+ +A+++ ++ P++S+ LIKGLLR+ R EA Q+
Sbjct: 673 HKADKAFELYADMISRGSIPELSILVHLIKGLLRVNRWEEALQLL 717
>gi|410109879|gb|AFV61019.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
macrostachya]
Length = 414
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 137/288 (47%), Gaps = 41/288 (14%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T + L + +++ K + F+ + +CG SL N ++ C+ + A+ + +
Sbjct: 92 TCRKVLEHMMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAI 151
Query: 170 SEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++W ++P+ +++ L+ GY +GDL E ++ + M G +P + +I K +K
Sbjct: 152 TKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKM 211
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
D+A ++F M K + G+ T+ +ID CK G++ A + ++M + + D +T ++
Sbjct: 212 DDANELFDEMLDKGLVPNGV-TFTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNT 270
Query: 289 IIYGLLARGRLREAYKVVEEIE----KPD------------------------------- 313
+IYGL +G L++A+ +++E+ KPD
Sbjct: 271 LIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQEN 330
Query: 314 ISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
I L Y LI GL + R +A +V REM+ G +P TY M++
Sbjct: 331 IRLDDVAYTALISGLCQEGRYLDAEKVLREMLSAGLKPDTGTYTMIIN 378
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 107/230 (46%), Gaps = 6/230 (2%)
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGD 192
M+ G + + + ++ LC+ + +A L + L + + PN + + LI G+C G
Sbjct: 186 MHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKSGR 245
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ A +I+ M + P + + +I K +A + M +K + + TY
Sbjct: 246 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKI-TYT 304
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
+ID CK G + A+ + M + I D++ +++I GL GR +A KV+ E+
Sbjct: 305 TLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSA 364
Query: 311 --KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
KPD Y +I + +++ +EM + G P++ TY +L+ G
Sbjct: 365 GLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 414
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 91/227 (40%), Gaps = 43/227 (18%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
N +TF ++D KS +DL E ++M + L D
Sbjct: 229 NGVTFTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPD------------------------ 264
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVG 191
L N ++ LC++ + +A LI ++S + +KP++I Y LI G C G
Sbjct: 265 ----------LITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEG 314
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLST 250
DL A + M E +I + + +A KV +M+ D G T
Sbjct: 315 DLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSAGLKPDTG--T 372
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
Y ++I+ CK+G + +L+EM + D S + Y +L G
Sbjct: 373 YTMIINEFCKKGDVWTGSKLLKEM-----QRDGHVPSVVTYNVLMNG 414
>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
Length = 825
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 165/386 (42%), Gaps = 20/386 (5%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALMTLAEVRELKKMVNFF 131
N +T++ +++ + K++ +D L++M G N+ T+ + + K+ V F
Sbjct: 258 NVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVF 317
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDV 190
M+ + N + LC+ + EA+ + + + KP+ I+YG L+ GY
Sbjct: 318 KEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATA 377
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G + ++N+M EG P V + +I + ++ D+++ +F+ M K+ + + T
Sbjct: 378 GCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDM-TKQGVNPDIIT 436
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE-- 308
+ VI C+ G++ A M G+ D S +I G R L +A +++ +
Sbjct: 437 FSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDML 496
Query: 309 ---IEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------ 359
I P I + +I L + R E V +I G P + T+ L+ G+
Sbjct: 497 SKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNM 556
Query: 360 ------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
L G +P + V G K G+ DA ++++ V + YN
Sbjct: 557 KEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNII 616
Query: 414 LHYYSNEEGVVMFEEVGKKLREVGLA 439
LH ++ +E+ ++ E G+A
Sbjct: 617 LHGLFQARRTIVAKEMFHEMIESGMA 642
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 148/322 (45%), Gaps = 28/322 (8%)
Query: 143 LEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWN 201
++ ++ LC+ V E K ++ L + +PN I + L+ GYC VG++ EA + +
Sbjct: 505 IKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLD 564
Query: 202 LMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKR 261
M G EP I + +++ + K + D+A+ +F+ M KR+ +S Y I++ + +
Sbjct: 565 SMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVS-YNIILHGLFQA 623
Query: 262 GKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLY 317
+ A M EM + G+ T ++++ GL EA ++E++ K DI +
Sbjct: 624 RRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTF 683
Query: 318 HGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTI 377
+ +I+ + ++ R +EA ++F + G PT+ TY +++ + + + D L F ++
Sbjct: 684 NIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNL--FSSM 741
Query: 378 --------------FVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEG- 422
+ L+ G+ A Y+ ++ +G+ +P L Y + G
Sbjct: 742 EKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGI-LPEATTTSLLIYLFSVNGK 800
Query: 423 ----VVMFEEVGKKLREVGLAD 440
+ + E + LRE D
Sbjct: 801 YREYIKLLPEKYRFLREQAAVD 822
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 130/348 (37%), Gaps = 65/348 (18%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N ++ + V +A L K+ E I PN + Y LI G C ++ +A ++ M
Sbjct: 228 NALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVG 287
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM-DDLGLSTYRIVIDWMCKRGKI 264
G P+ + +I + E+++VF+ M + D+G + +CK G+I
Sbjct: 288 AGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVG--NCNSFMTALCKHGRI 345
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG-------------------------RL 299
+A + + M +G + D ++ ++++G G L
Sbjct: 346 KEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTL 405
Query: 300 REAYKVVEEIEK--------------PDISLYHGLIKGLLRLRRAREATQVFREMIKRGC 345
AY + ++K PDI + +I RL R +A + F MI G
Sbjct: 406 INAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGV 465
Query: 346 EPTMHTYIMLLQGHLGKRG------------RKG-PDPLVNFDTIFVGGLVKAGKSLDAA 392
P Y L+QG +R KG P P + F T + L K G+ +
Sbjct: 466 PPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGK 525
Query: 393 KYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLAD 440
V+ +++ G +N + Y VG VGL D
Sbjct: 526 DVVDLIIHTGQRPNLITFNSLVDGYC---------LVGNMKEAVGLLD 564
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 104/235 (44%), Gaps = 3/235 (1%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIM 134
T+N +VD K ID ++M +R+ + ++ I L L + R FH M
Sbjct: 577 TYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEM 636
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDL 193
+ G S+ V+ LC+ EA L+ KL S +K + + + +I+ VG
Sbjct: 637 IESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRR 696
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
EA +++ ++ G P+I MI K ++A +F M K
Sbjct: 697 QEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSME-KSSCTPDSRILNE 755
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
+I + +G++++A L ++ K+GI + T S +IY G+ RE K++ E
Sbjct: 756 IIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPE 810
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 82/202 (40%), Gaps = 23/202 (11%)
Query: 241 KRMDDLG-------LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
KRMD + TY I+I+ + + + + + G+ D + +++I G
Sbjct: 175 KRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGF 234
Query: 294 LARGRLREA----YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
G + +A YK+ E+ P++ Y LI GL + + +A +V R+M+ G P
Sbjct: 235 SKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNN 294
Query: 350 HTYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVER 397
TY L+ G+ + P V F+ L K G+ +A +
Sbjct: 295 MTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDS 354
Query: 398 VMNRGVEVPRFDYNKFLHYYSN 419
++ +G + Y LH Y+
Sbjct: 355 MVLKGPKPDVISYGALLHGYAT 376
>gi|224085950|ref|XP_002307751.1| predicted protein [Populus trichocarpa]
gi|222857200|gb|EEE94747.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 137/314 (43%), Gaps = 43/314 (13%)
Query: 56 VYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIA 114
V FF + Q F + +N MVD G+ D+ W + M R + V +TF I
Sbjct: 77 VLAFFNWASN-QDGFRKSPEAYNEMVDFSGQVMMFDVAWYFIDLMKARNVDVTVETFLIL 135
Query: 115 LMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIK 174
+ + ++ F+ M D C+ + ++ LC+ + +A+ L + +
Sbjct: 136 MRRYVRAGLAAEAIHAFNRMEDYNCKPDKIAFSILISILCRERRASQAQEFFDSLKDKFE 195
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+ I Y L++G+C G++ EA +++ M G +P++
Sbjct: 196 PDVIVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNV---------------------- 233
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
TY IVID +C+ G+I++A+ + EM G + +++T +S++ +
Sbjct: 234 --------------YTYSIVIDSLCRCGQITRAHDIFAEMLDAGCQPNSITYNSLMRIHV 279
Query: 295 ARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
GR + +V ++++ PD Y+ LI+ + +A +V M K+GC P
Sbjct: 280 KAGRTEKVLQVYNQMKRLGCEPDTVTYNFLIETHCKDENLEDAIKVIGLMAKKGCAPNAS 339
Query: 351 TYIMLLQGHLGKRG 364
T+ L G + K G
Sbjct: 340 TFNTLF-GCIAKLG 352
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 107/223 (47%), Gaps = 8/223 (3%)
Query: 149 VVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEG 207
V+ +LC+ + A + + L +PN I Y L++ + G + +++N M G
Sbjct: 239 VIDSLCRCGQITRAHDIFAEMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLG 298
Query: 208 FEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQA 267
EP + +IET K ++A+KV +M K+ ST+ + + K G ++ A
Sbjct: 299 CEPDTVTYNFLIETHCKDENLEDAIKVIGLM-AKKGCAPNASTFNTLFGCIAKLGDVNAA 357
Query: 268 YTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKG 323
+ M ++M + EA+ +T ++++ +A K+ E+++ P+++ Y LI
Sbjct: 358 HRMYKKMKELNCEANTVTYNTLMKMFVASKSTDMVLKLKTEMDENKIEPNVNTYKVLITM 417
Query: 324 LLRLRRAREATQVFREMIKRGC-EPTMHTYIMLLQGHLGKRGR 365
+ A + FREMI C P++ Y M+LQ L K G+
Sbjct: 418 YCGMGHWNNAYKFFREMIDEKCLRPSLPVYDMVLQ-QLRKAGQ 459
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 22/166 (13%)
Query: 215 VDKMIETFFKINK-------DDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGK 263
VD +ETF + + EA+ F RM+D + I+I +C+ +
Sbjct: 125 VDVTVETFLILMRRYVRAGLAAEAIHAFN-----RMEDYNCKPDKIAFSILISILCRERR 179
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHG 319
SQA + + K E D + ++++ G G + EA +V E++ KP++ Y
Sbjct: 180 ASQAQEFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSI 238
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
+I L R + A +F EM+ GC+P TY L++ H+ K GR
Sbjct: 239 VIDSLCRCGQITRAHDIFAEMLDAGCQPNSITYNSLMRIHV-KAGR 283
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 87/208 (41%), Gaps = 2/208 (0%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
NSIT+N ++ I K+ + + +M R D T+ + T + L+ +
Sbjct: 267 NSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEPDTVTYNFLIETHCKDENLEDAIKVI 326
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDV 190
+M GC + N + + + V A + K+ E + N + Y L+K +
Sbjct: 327 GLMAKKGCAPNASTFNTLFGCIAKLGDVNAAHRMYKKMKELNCEANTVTYNTLMKMFVAS 386
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
K+ M + EP+++ +I + + + A K F+ M ++ L
Sbjct: 387 KSTDMVLKLKTEMDENKIEPNVNTYKVLITMYCGMGHWNNAYKFFREMIDEKCLRPSLPV 446
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRG 278
Y +V+ + K G++ + ++E+M RG
Sbjct: 447 YDMVLQQLRKAGQLKKHEELVEKMVDRG 474
>gi|255660818|gb|ACU25578.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 418
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 139/300 (46%), Gaps = 46/300 (15%)
Query: 104 RLVNDKTFKIALMTLAEVRE-------LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQR 156
RL + F++ T +V E K + F+ +CG SL N ++ + C+
Sbjct: 90 RLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFCKE 149
Query: 157 KLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVV 215
+ A+ + +++W ++P+ +++ L+ GY +GDL E ++ N M G +P +
Sbjct: 150 GEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTY 209
Query: 216 DKMIETFFKINKDDEAMKVFQMM-----------------------RV-------KRMDD 245
+I K +K D+A ++F M RV K+M
Sbjct: 210 SVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDGHCKDGRVDLAMEIYKQMLS 269
Query: 246 LGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
LS TY +I +CK G + QA ++ EM +G++ D +T +++I G G L
Sbjct: 270 QSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTTLIDGSCKEGDLET 329
Query: 302 AYKVVEEIEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
A++ + + K +I L Y LI GL + R+ +A ++ REM+ G +P + TY M++
Sbjct: 330 AFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN 389
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 87/208 (41%), Gaps = 38/208 (18%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
NS++F ++D K +DL E ++M + L D
Sbjct: 240 NSVSFTTLIDGHCKDGRVDLAMEIYKQMLSQSLSPD------------------------ 275
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVG 191
L N ++ LC+ + +A+ LI ++S + +KP++I Y LI G C G
Sbjct: 276 ----------LITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTTLIDGSCKEG 325
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLST 250
DL A + M E +I + + +A K+ +M+ V ++G T
Sbjct: 326 DLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG--T 383
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRG 278
Y ++I+ CK+G + +++EM + G
Sbjct: 384 YTMIINEFCKKGDVWTGSKLMKEMQRDG 411
>gi|296087160|emb|CBI33534.3| unnamed protein product [Vitis vinifera]
Length = 506
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 164/367 (44%), Gaps = 27/367 (7%)
Query: 72 HNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFF 131
H+ ++N +VD++GK+ D W+ ++ M ++ L++ TF + +++ + F
Sbjct: 123 HSPYSWNLVVDMLGKNFLFDAMWDAVKSMKKQGLLSLATFASIFSSYVIADRVREAIMTF 182
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVG 191
+M GC + LN ++ +C+ V+A + + I+P+ Y L++G+ G
Sbjct: 183 DVMEQYGCPRDIVALNSLLSAICRDGRTVQAAEFLRNVRGLIRPDADTYAILLEGWESEG 242
Query: 192 DLIEASKIWNLMT-DEGFEP-SIDVVDKMIETFFK-INKDDEAMKVFQMMRVKRMDDLGL 248
+ A + ++ M D G++P ++ D + + EAMK F++MR R G+
Sbjct: 243 NCGAARQTFDEMVMDIGWDPGNVSAYDSFLNALLHGPDGRREAMKFFEIMR-DRQCSPGM 301
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL--------LARGRLR 300
YRI + K A + + M R I + + + + L +ARG L
Sbjct: 302 RFYRIGLQECVKTSDSKGAQLLWQTMLSRNICRPDTEMYNSMIALHCSCDNIVMARGMLD 361
Query: 301 EAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY-----IML 355
E +V PD Y+ L + L+R R+ EA +F EM++ C P + I L
Sbjct: 362 E---MVCNGAFPDSETYNVLFRFLIRRRKLEEAFSIFSEMVQNECVPDLTNCNAAVRIYL 418
Query: 356 LQGHLGKRGRKGPDPLVNFDT-------IFVGGLVKAGKSLDAAKYVERVMNRGVEVPRF 408
G + K + + N D+ + V GL + +A KY + ++ RG+++
Sbjct: 419 DLGDVYKAIKVWKYIIENHDSGLEETGNLLVTGLRDHDRIPEAVKYAKDMIVRGIKLTSS 478
Query: 409 DYNKFLH 415
+K H
Sbjct: 479 TLSKLKH 485
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/398 (22%), Positives = 176/398 (44%), Gaps = 62/398 (15%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHI 133
+T+N ++D K + + L EM RR ND T+ + + L++ E ++
Sbjct: 235 VTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGE 294
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEA----KYLILK--------------------- 168
M G + S N ++ + ++ EA + ++LK
Sbjct: 295 MLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGR 354
Query: 169 -----------LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDK 217
L+ + P+ ++Y LI GYC +G+L++A +++ + P+I +
Sbjct: 355 MSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNT 414
Query: 218 MIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEE 273
+++ + + ++V Q ++V+ +++ G++ TY I+++ CK G +S A +E
Sbjct: 415 LLDGLCRQGE----LEVAQQLKVEMINE-GIAPDIVTYTILVNGSCKMGSLSMAQEFFDE 469
Query: 274 MFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRR 329
M G+E D+ ++ I G L G A+ + EE+ PD+ +Y+ ++ GL +L
Sbjct: 470 MLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGN 529
Query: 330 AREATQVFREMIKRGCEPTMHTYIMLLQGHLG----KRGR--------KGPDPLVNFDTI 377
EA+++ ++M+ G P TY ++ HL ++GR KG P V T+
Sbjct: 530 LEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTV 589
Query: 378 FVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
+ G G+ A Y + +G+ YN ++
Sbjct: 590 LIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLIN 627
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 111/250 (44%), Gaps = 41/250 (16%)
Query: 147 NKVVKTLC-QRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N ++ LC Q +L V + + ++E I P+ + Y L+ G C +G L A + ++ M
Sbjct: 413 NTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLH 472
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKIS 265
EG E I K+ A + + M K L Y +V+D +CK G +
Sbjct: 473 EGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPP-DLIIYNVVVDGLCKLGNLE 531
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI---------------- 309
+A +L++M G+ D +T +SII+ L GRLR+ ++ E+
Sbjct: 532 EASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLI 591
Query: 310 --------------------EK---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
EK P++ Y+ LI GL ++RR +A F EM+++G
Sbjct: 592 HGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIF 651
Query: 347 PTMHTYIMLL 356
P ++Y +L+
Sbjct: 652 PNKYSYTILI 661
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 126/281 (44%), Gaps = 13/281 (4%)
Query: 124 LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGW 182
+ K V + M + G + ++ N ++ + C+ V + L+ ++ PN++ Y
Sbjct: 215 MSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNV 274
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
LI G G+ +A + M G + S + +I +F EA+ + + M +K
Sbjct: 275 LINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKG 334
Query: 243 MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
++TY I +CK G++S A L +M + D ++ +++IYG G L +A
Sbjct: 335 ASPT-VATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKA 393
Query: 303 YKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+ + +E+ P I Y+ L+ GL R A Q+ EMI G P + TY +L+ G
Sbjct: 394 FLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNG 453
Query: 359 HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVM 399
K G ++ F ++ G LD+ Y R++
Sbjct: 454 SC-KMGS------LSMAQEFFDEMLHEGLELDSYAYATRIV 487
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/362 (20%), Positives = 164/362 (45%), Gaps = 44/362 (12%)
Query: 16 YQQQYSPESRLHSSLSSCNFNLTHEF---------FLQICNNFPLSWRPVYLFFQYTQKA 66
+Q S R S S + L+H+F F+++ ++F S R F++ + +
Sbjct: 49 FQDVISKSIREKPSNFSNYYWLSHQFGPVIVDPDLFVRVLSSFRTSPRMALRLFRWAE-S 107
Query: 67 QPCFAHNSITFNRMVDIIGKSRNI-DLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELK 125
QP F + F +++I+ ++ + +W R++N +I + +
Sbjct: 108 QPGFRRSEFVFCAILEILAQNNLMRSAYWVM------ERVINANMHRIVDVLIG------ 155
Query: 126 KMVNFFHIMNDCGC---EYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYG 181
GC E S+++L+ ++ ++ +V + + K+ + P+
Sbjct: 156 ------------GCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCN 203
Query: 182 WLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK 241
+++ D + +A +++ M + G +P+I + +++++ K K + + + M+ +
Sbjct: 204 RILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQ-R 262
Query: 242 RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
R TY ++I+ + K+G+ QA ++ EM K G++ T + +IYG +G L E
Sbjct: 263 RGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAE 322
Query: 302 AYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
A + EE+ P ++ Y+ I GL +L R +A Q +M+ P + +Y L+
Sbjct: 323 ALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIY 382
Query: 358 GH 359
G+
Sbjct: 383 GY 384
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 67/165 (40%), Gaps = 27/165 (16%)
Query: 260 KRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDIS 315
K+ + Q ++ ++M K + D + I+ L + + +A +V + KP I
Sbjct: 176 KKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIV 235
Query: 316 LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFD 375
Y+ L+ + + ++ + EM +RGC P TY
Sbjct: 236 TYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTY----------------------- 272
Query: 376 TIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE 420
+ + GL K G+ A + ++ G++V + YN ++ Y N+
Sbjct: 273 NVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNK 317
Score = 38.1 bits (87), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 59/121 (48%), Gaps = 4/121 (3%)
Query: 91 DLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVV 150
++F+E L + +V T+ + + A L++ +F M + G ++ N ++
Sbjct: 570 EIFYEMLSKGLTPSVV---TYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLI 626
Query: 151 KTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFE 209
LC+ + + +A ++ E I PN+ +Y LI C++G+ EA ++ M D G +
Sbjct: 627 NGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQ 686
Query: 210 P 210
P
Sbjct: 687 P 687
>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Brachypodium distachyon]
Length = 676
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 154/354 (43%), Gaps = 33/354 (9%)
Query: 85 GKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLE 144
G+ +D +Q G+ +++ T + + + + + F M + G ++
Sbjct: 199 GRMEEVDALLTVMQ--GQGFCLDNATCTVIVRVFCQKGRFRDVSELFRRMLEMGTPPNVV 256
Query: 145 MLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIW-NL 202
+ LC+R V +A Y++ ++ ++ +KPN + LI G C +G A +++ L
Sbjct: 257 NYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKL 316
Query: 203 MTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWM 258
+ ++P++ MI + K K A M + RM + GL+ TY +I
Sbjct: 317 IKSSSYKPNVHTYTVMIGGYCKEGKLARAE-----MLLGRMVEQGLAPNTNTYTTLISGH 371
Query: 259 CKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISL-- 316
CK G + A+ ++ +M + G + + T +++I GL +G+++EAYKV+ + L
Sbjct: 372 CKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDK 431
Query: 317 --YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNF 374
Y +I + A +F M + GC P +HTY L+ + +R + L F
Sbjct: 432 VTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKL--F 489
Query: 375 D--------------TIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
D T + G K GKS A + ER++ G + Y +
Sbjct: 490 DKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGALI 543
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 128/284 (45%), Gaps = 26/284 (9%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+ ++ LI G C G + E + +M +GF ++ F + + + ++
Sbjct: 183 PDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDVSEL 242
Query: 235 FQMMRVKRMDDLG----LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
F +RM ++G + Y ID +CKR + QA+ +LEEM +G++ + T +S+I
Sbjct: 243 F-----RRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLI 297
Query: 291 YGLLARGRLREAYKVVEEI-----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGC 345
GL G A+++ ++ KP++ Y +I G + + A + M+++G
Sbjct: 298 NGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGL 357
Query: 346 EPTMHTYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAK 393
P +TY L+ GH + K R+G P + + GL K GK +A K
Sbjct: 358 APNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYK 417
Query: 394 YVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVG 437
+ N+G+++ + Y + + + + ++ ++ E G
Sbjct: 418 VLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENG 461
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 136/317 (42%), Gaps = 29/317 (9%)
Query: 131 FHIMNDC---GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS--EWIKPNEIAYGWLIK 185
F +MN G + ++ N ++ LC++ + EA Y +L+++ + ++ +++ Y +I
Sbjct: 381 FELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEA-YKVLRMANNQGLQLDKVTYTVMIT 439
Query: 186 GYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD 245
+C G + A ++N M + G P I +I + + + +E+ K+F +
Sbjct: 440 EHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVP 499
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
TY +I CK GK + A + E M + G +AD++T ++I GL RL EA
Sbjct: 500 TK-QTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEEAR-- 556
Query: 306 VEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
+LY G++ L T F C + + L KR +
Sbjct: 557 ---------ALYEGMLDKRLVPCEVTPVTLAFEY-----CRREKAVVAVSILDRLDKRRK 602
Query: 366 KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVM 425
+ VN + V L G DA+ ++++ ++ + V R Y F++ + +
Sbjct: 603 ---NHTVN---VLVRKLSAIGHVEDASLFLKKALDVDLAVDRLAYTSFINSCYANKKYAL 656
Query: 426 FEEVGKKLREVGLADLA 442
E+ +K+ D A
Sbjct: 657 ATEISEKISSSQDKDAA 673
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 117/249 (46%), Gaps = 6/249 (2%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMV 128
F N T+N ++D + K I ++ L+ + L DK T+ + + + + +
Sbjct: 392 FQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYAL 451
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGY 187
+ F+ M + GC + ++ CQ++ + E++ L K L+ + P + Y +I GY
Sbjct: 452 DLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGY 511
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C VG A +++ M G + +I K ++ +EA +++ M KR+
Sbjct: 512 CKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDKRLVPCE 571
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
++ + ++ C+R K A ++L+ + KR N T++ ++ L A G + +A ++
Sbjct: 572 VTPVTLAFEY-CRREKAVVAVSILDRLDKR---RKNHTVNVLVRKLSAIGHVEDASLFLK 627
Query: 308 EIEKPDISL 316
+ D+++
Sbjct: 628 KALDVDLAV 636
>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 800
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 117/222 (52%), Gaps = 24/222 (10%)
Query: 139 CEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASK 198
C+ +L+MLN V + ++P+ AY LI G+C G++ A +
Sbjct: 577 CDLALKMLNDV-------------------RCKGLRPDIAAYNSLIFGFCQEGNMSHALQ 617
Query: 199 IWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWM 258
+ LM +G P+I V + I + + +EA+++++ M +K DL +TY +ID
Sbjct: 618 VLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKM-IKEGIDLDTATYTTLIDGF 676
Query: 259 CKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDI 314
K G ++ A + EM +G D++T +++ +GL G + +A K+++E+ +P++
Sbjct: 677 SKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNV 736
Query: 315 SLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
+Y+ LI G LR + +EA ++ EM++R P TY +L+
Sbjct: 737 LMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV 778
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 107/440 (24%), Positives = 177/440 (40%), Gaps = 46/440 (10%)
Query: 8 LVRVCTILYQQQYSPES--------RLHSSLSSCN-FNLTHEFFLQICNNFPLSWRPVYL 58
L+R CT ++ PE R H L S N FN+ + L N L V L
Sbjct: 323 LIRGCT----EEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLL----NDKLWKDAVSL 374
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDL---FWETLQEMGRRRLVNDKTFKIAL 115
F + P ++ T+N ++ + + R I WE + E G + + T+ L
Sbjct: 375 FKEMADSGIP----DAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYI--VTYHSLL 428
Query: 116 MTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIK 174
+ + + V + M G ++ ++K + +A L+ ++ + +
Sbjct: 429 LCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVS 488
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
N+ Y LI G C VG + E ++ EGF P+ + +I F K A V
Sbjct: 489 CNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAV 548
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
+Q M K + + TY ID CK A ML ++ +G+ D +S+I+G
Sbjct: 549 YQQMCAKGIPP-NIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFC 607
Query: 295 ARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
G + A +V+ + K P+IS+Y+ I G L+ EA +++ +MIK G +
Sbjct: 608 QEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTA 667
Query: 351 TYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVER 397
TY L+ G K G KG P T GL + G DA K ++
Sbjct: 668 TYTTLIDG-FSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDE 726
Query: 398 VMNRGVEVPRFDYNKFLHYY 417
+ + YN ++ Y
Sbjct: 727 MNRLDIRPNVLMYNMLINGY 746
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 117/269 (43%), Gaps = 26/269 (9%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
L + + P ++ Y LI+G + G +A ++ M D G PS + + +I+
Sbjct: 309 LRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLW 368
Query: 229 DEAMKVFQMMRVKRMDDLGLS---TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
+A+ +F K M D G+ TY I+I W+C+R KI +A + E+M + G++ +T
Sbjct: 369 KDAVSLF-----KEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVT 423
Query: 286 LSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMI 341
S++ G + EA K+ E+ P++ Y L+KG + +A + EM
Sbjct: 424 YHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMK 483
Query: 342 KRGCEPTMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKS 388
+ G +TY L+ G L GR +G P + G +KAG
Sbjct: 484 QNGVSCNDYTYNTLING-LCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMM 542
Query: 389 LDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
A +++ +G+ Y F+ Y
Sbjct: 543 GSAFAVYQQMCAKGIPPNIVTYTSFIDGY 571
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 104/239 (43%), Gaps = 18/239 (7%)
Query: 216 DKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMF 275
D ++ FK D+A+++F M ++ + I +CK ++A +L +M
Sbjct: 181 DVVMRACFKEGMYDDAVRLFDEMPASEIEP-DQRVCSVAIASLCKLRDANRALLVLRKMQ 239
Query: 276 KRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAR 331
G + T +S++ L+ GR+ EA + +E+ +K + L L+ G R R
Sbjct: 240 DAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVR 299
Query: 332 EATQVFREMIKRGCEPTMHTYIMLLQG-----------HLGKRGRK-GPDPLVNFDTIFV 379
+A +F E ++ G PT TY +L++G L ++ R G P N + +
Sbjct: 300 KALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVI 359
Query: 380 GGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
GL+ DA + + + G+ F YN +H+ + + +K+ E G+
Sbjct: 360 KGLLNDKLWKDAVSLFKEMADSGIP-DAFTYNILIHWLCQRRKIREALNLWEKMNETGV 417
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 90/190 (47%), Gaps = 8/190 (4%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
I+P++ I C + D A + M D GF P + +++ K + +EA+
Sbjct: 208 IEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEAL 267
Query: 233 KV-FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
+ +++ + + L+T ++ C + ++ +A + EE + G+ ++T + +I
Sbjct: 268 HIKDELLATGKKMSVVLAT--TLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIR 325
Query: 292 GLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
G G +AY++ ++ P + ++ +IKGLL + ++A +F+EM G P
Sbjct: 326 GCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-P 384
Query: 348 TMHTYIMLLQ 357
TY +L+
Sbjct: 385 DAFTYNILIH 394
>gi|302767746|ref|XP_002967293.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
gi|300165284|gb|EFJ31892.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
Length = 321
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 123/285 (43%), Gaps = 39/285 (13%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
TF I + L + L +M + GC + + N ++ LC+ EA I +
Sbjct: 12 TFGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGRSAEAYGFIETM 71
Query: 170 -SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
S + P + Y LI G+C L A +I MT G EP+ + + K K
Sbjct: 72 RSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGKV 131
Query: 229 DEAMKVFQMMRVK--RMDDLGLST--------------------------------YRIV 254
D+A+ +F+ M K R+D G +T Y +
Sbjct: 132 DDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAI 191
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDI 314
+ W+CK +I++A+ + + M GI D LT +++G R+ +A ++++++ +
Sbjct: 192 LSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGL 251
Query: 315 S----LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
+ +Y+ LI L R R EA ++ +EMI RG P TY ++
Sbjct: 252 APREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRTYALM 296
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 93/191 (48%), Gaps = 13/191 (6%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P + +G L+ G C L +A ++ +M + G P+ V + +++ K + EA
Sbjct: 8 PTVVTFGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGRSAEAYGF 67
Query: 235 FQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
+ MR +G+S TY ++ID CK K+ +A +L+EM RG E +++T ++ +
Sbjct: 68 IETMR-----SMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFL 122
Query: 291 YGLLARGRLREAYKVVEEIEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCE 346
+GL G++ +A + + + I L Y LI GL + + EA + EM GC
Sbjct: 123 HGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCV 182
Query: 347 PTMHTYIMLLQ 357
P Y +L
Sbjct: 183 PKPGCYNAILS 193
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 84/185 (45%), Gaps = 20/185 (10%)
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
T+ I++D +CK +++ A+ ++E M +RG + L + I+ L GR EAY +E +
Sbjct: 12 TFGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGRSAEAYGFIETM 71
Query: 310 EK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
P I Y+ LI G + + A ++ +EM RG EP TY L G L K G
Sbjct: 72 RSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHG-LCKYG- 129
Query: 366 KGPDPLVNFD--------------TIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
K D L F T + GL +AGK +A ++ + N G YN
Sbjct: 130 KVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYN 189
Query: 412 KFLHY 416
L +
Sbjct: 190 AILSW 194
>gi|225447562|ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Vitis vinifera]
Length = 616
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 95/187 (50%), Gaps = 5/187 (2%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P +Y LI GYC+ G L K+ LM G P + +I F + K EA K+
Sbjct: 347 PTITSYNTLIAGYCNKGLLNSGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKI 406
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
F M+ + + TY +I+ + G + +EM + GI+AD LT +++I GL
Sbjct: 407 FSEMKANDVVPNTI-TYNTLINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLC 465
Query: 295 ARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
GR ++A +V+E+++ P+ S + LI G + + A Q+++ MI+ GC P H
Sbjct: 466 MEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYH 525
Query: 351 TYIMLLQ 357
T+ ML+
Sbjct: 526 TFKMLIS 532
>gi|356523145|ref|XP_003530202.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Glycine max]
Length = 529
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 152/300 (50%), Gaps = 8/300 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
N ++ N ++ + K +D+ L EM LV N ++ L +++ + F
Sbjct: 185 NVVSCNILLKALCKRNEVDVAVRVLDEMSLMGLVPNVVSYSTVLGGFVFKGDMESAMRVF 244
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQ-RKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDV 190
+ D G + ++ C+ KLV + + L ++P+E+ YG +I+ YC
Sbjct: 245 GEILDKGWMPDVTSYTVLMSGFCRLGKLVDAIRMMDLMEENRVQPSEVTYGVMIEAYCKG 304
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
EA + M ++G PS + K+++ + + A +V++ + V++ +G +
Sbjct: 305 RKPGEAVNLLEDMVEKGLVPSSVLCCKVVDLLCEEGSVERACEVWRGV-VRKGWRVGGAV 363
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE-I 309
++ W+CK GK+ +A +L+E+ ++G A +T +++I G+ RG+L EA ++ +E +
Sbjct: 364 VSTIVHWLCKEGKVVEARGVLDEL-EKGEVASLMTYNTLIAGMCERGQLCEAGRLWDEMV 422
Query: 310 EK---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK 366
EK P+ Y+ L+KG ++ +EA +V EM++ GC P T+ +L+ G G+K
Sbjct: 423 EKGRVPNAFTYNVLMKGFCKVGDVKEAIRVLEEMVESGCLPNKSTFSILVDGISLSGGKK 482
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 110/257 (42%), Gaps = 74/257 (28%)
Query: 175 PNEIAYGWLIKGYC-----DV------------------------------GDLIEASKI 199
PN ++ L+K C DV GD+ A ++
Sbjct: 184 PNVVSCNILLKALCKRNEVDVAVRVLDEMSLMGLVPNVVSYSTVLGGFVFKGDMESAMRV 243
Query: 200 WNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMC 259
+ + D+G+ P + ++ F ++ K +A+++ +M R+ + TY ++I+ C
Sbjct: 244 FGEILDKGWMPDVTSYTVLMSGFCRLGKLVDAIRMMDLMEENRVQPSEV-TYGVMIEAYC 302
Query: 260 KRGKISQAYTMLEEMFKRGIEADNL----------------------------------- 284
K K +A +LE+M ++G+ ++
Sbjct: 303 KGRKPGEAVNLLEDMVEKGLVPSSVLCCKVVDLLCEEGSVERACEVWRGVVRKGWRVGGA 362
Query: 285 TLSSIIYGLLARGRLREAYKVVEEIEKPDIS---LYHGLIKGLLRLRRAREATQVFREMI 341
+S+I++ L G++ EA V++E+EK +++ Y+ LI G+ + EA +++ EM+
Sbjct: 363 VVSTIVHWLCKEGKVVEARGVLDELEKGEVASLMTYNTLIAGMCERGQLCEAGRLWDEMV 422
Query: 342 KRGCEPTMHTYIMLLQG 358
++G P TY +L++G
Sbjct: 423 EKGRVPNAFTYNVLMKG 439
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 103/245 (42%), Gaps = 42/245 (17%)
Query: 64 QKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTL-AEVR 122
+ QP + +T+ M++ K R L++M + LV ++ L E
Sbjct: 285 NRVQP----SEVTYGVMIEAYCKGRKPGEAVNLLEDMVEKGLVPSSVLCCKVVDLLCEEG 340
Query: 123 ELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGW 182
+++ + + G +++ +V LC+ VVEA+ ++ +L + + + Y
Sbjct: 341 SVERACEVWRGVVRKGWRVGGAVVSTIVHWLCKEGKVVEARGVLDELEKGEVASLMTYNT 400
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
LI G C+ G L EA ++W+ M ++G P+ F
Sbjct: 401 LIAGMCERGQLCEAGRLWDEMVEKGRVPN---------AF-------------------- 431
Query: 243 MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL-LARGRLRE 301
TY +++ CK G + +A +LEEM + G + T S ++ G+ L+ G+ E
Sbjct: 432 -------TYNVLMKGFCKVGDVKEAIRVLEEMVESGCLPNKSTFSILVDGISLSGGKKEE 484
Query: 302 AYKVV 306
KVV
Sbjct: 485 IDKVV 489
>gi|449435168|ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Cucumis sativus]
Length = 962
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 133/273 (48%), Gaps = 7/273 (2%)
Query: 96 TLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLC 154
T++EM ++R +TF + A E+KK ++ F +M GC ++ N ++ L
Sbjct: 578 TVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLV 637
Query: 155 QRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSID 213
+++ + +A+ ++ +++ + PNE Y ++ GY +GD +A + + DEG + +
Sbjct: 638 EKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVY 697
Query: 214 VVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEE 273
+ +++ K + A+ V + M + + Y I+ID +RG I +A ++++
Sbjct: 698 TYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTF-IYNILIDGWARRGDIWEAADLMQQ 756
Query: 274 MFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRR 329
M + G++ D T +S I G ++ A K +EE++ KP++ Y LI G R
Sbjct: 757 MKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASL 816
Query: 330 AREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
+A F EM G +P Y L+ L +
Sbjct: 817 PEKALSCFEEMKLSGLKPDRAVYHCLMTSLLSR 849
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/418 (22%), Positives = 180/418 (43%), Gaps = 47/418 (11%)
Query: 50 PLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VND 108
P +W+ V F+ +K + + MV+ + ++ ET ++M R + +
Sbjct: 293 PENWQAVVSAFERIKKP------SRKEYGLMVNYYTRRGDMHRARETFEKMRARGIEPSS 346
Query: 109 KTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK 168
+ + A R++++ ++ M + G E SL + +V + A + +
Sbjct: 347 HVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQE 406
Query: 169 LSEWIKP-NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINK 227
E N I YG +I YC ++ +A + M +EG + ID+ M++ + +
Sbjct: 407 AKEKHSSLNAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGD 466
Query: 228 DDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADN 283
+D+ + VF+ R + GL+ TY +I+ K GK+S+A + +EM GI+ +
Sbjct: 467 EDKCLLVFE-----RFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNM 521
Query: 284 LTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFRE 339
T S +I G L A+ + E++ KPD+ LY+ +I + + A +E
Sbjct: 522 KTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKE 581
Query: 340 MIKRGCEPTMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAG 386
M K+ +PT T++ ++ G ++G G P V+ + GLV+
Sbjct: 582 MQKQRHKPTTRTFMPIIHG-FARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKR 640
Query: 387 KSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGK------KLREVGL 438
K A + ++ + GV Y +H Y++ + GK KLR+ GL
Sbjct: 641 KMEKAEQILDEMTLAGVSPNEHTYTTIMHGYAS------LGDTGKAFTYFTKLRDEGL 692
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 167/378 (44%), Gaps = 29/378 (7%)
Query: 77 FNRMVD---IIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHI 133
++ M+D ++G L +E +E G V T+ + A++ ++ K +
Sbjct: 454 YHTMMDGYTMVGDEDKCLLVFERFKECGLNPSV--ITYGCLINLYAKLGKVSKALEVSKE 511
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGD 192
M G +++++ + ++ + K A + L + IKP+ + Y +I +C +G
Sbjct: 512 MEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGK 571
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ A M + +P+ +I F + + +A+ VF MMR+ + TY
Sbjct: 572 MDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPT-VHTYN 630
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY----KVVEE 308
+I + ++ K+ +A +L+EM G+ + T ++I++G + G +A+ K+ +E
Sbjct: 631 ALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDE 690
Query: 309 IEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG---- 364
+ D+ Y L+K + R + A V +EM + Y +L+ G +RG
Sbjct: 691 GLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDG-WARRGDIWE 749
Query: 365 ---------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
R+G P ++ T F+ KAG A K +E + + GV+ Y ++
Sbjct: 750 AADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLIN 809
Query: 416 YYSN----EEGVVMFEEV 429
++ E+ + FEE+
Sbjct: 810 GWARASLPEKALSCFEEM 827
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 134/292 (45%), Gaps = 7/292 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKT-FKIALMTLAEVRELKKMVNFF 131
N +T+ +V+ + K +IDL + L +M ++ D F + +L + R + +N F
Sbjct: 148 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 207
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
M G ++ + ++ LC +A L+ + E I PN + + LI +
Sbjct: 208 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 267
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G +EA K+ + M +P I + +I F ++ D+A ++F+ M K L T
Sbjct: 268 GKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFP-DLDT 326
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y +I CK ++ + EM RG+ D +T +++I GL G A KV +++
Sbjct: 327 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 386
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
PDI Y L+ GL + +A +VF M K + ++ Y +++G
Sbjct: 387 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEG 438
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 154/347 (44%), Gaps = 22/347 (6%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T+ + + L + ++ N + M E + + N ++ +LC+ + V +A L ++
Sbjct: 151 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 210
Query: 170 -SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++ I+PN + Y LI C G +AS++ + M ++ P++ + +I+ F K K
Sbjct: 211 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 270
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
EA K+ M +KR D + TY +I+ C ++ +A M E M + D T ++
Sbjct: 271 VEAEKLHDDM-IKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNT 329
Query: 289 IIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+I G R+ + ++ E+ D Y LI+GL A +VF++M+ G
Sbjct: 330 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 389
Query: 345 CEPTMHTYIMLLQGHLGKRGRKGPDPLVNFD--------------TIFVGGLVKAGKSLD 390
P + TY +LL G L G K L FD T + G+ KAGK D
Sbjct: 390 VPPDIMTYSILLDG-LCNNG-KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 447
Query: 391 AAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVG 437
+ +GV+ YN + ++ + + KK++E G
Sbjct: 448 GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 494
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 111/226 (49%), Gaps = 6/226 (2%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEA 196
GC+ +L VV LC+R + A L+ K+ + I+ + + + +I C + +A
Sbjct: 144 GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDA 203
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVID 256
++ M +G P++ +I + +A ++ M K+++ L T+ +ID
Sbjct: 204 LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP-NLVTFNALID 262
Query: 257 WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----P 312
K GK +A + ++M KR I+ D T +S+I G RL +A ++ E + P
Sbjct: 263 AFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFP 322
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
D+ Y+ LIKG + +R + T++FREM RG TY L+QG
Sbjct: 323 DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 368
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 126/279 (45%), Gaps = 31/279 (11%)
Query: 146 LNKVVKTLCQRK---LVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNL 202
NK++ + + K LV+ L + +P+ + L+ GYC + +A + +
Sbjct: 45 FNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 104
Query: 203 MTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRG 262
M + G+ P +I F NK EA+ + M V+R L TY +V++ +CKRG
Sbjct: 105 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM-VQRGCQPNLVTYGVVVNGLCKRG 163
Query: 263 KISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYH 318
I A+ +L +M IEAD + ++II L + +A + +E+E +P++ Y
Sbjct: 164 DIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 223
Query: 319 GLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIF 378
LI L R +A+Q+ +MI++ P + T+ L+
Sbjct: 224 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID--------------------- 262
Query: 379 VGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
VK GK ++A K + ++ R ++ F YN ++ +
Sbjct: 263 --AFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 299
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 131/279 (46%), Gaps = 9/279 (3%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N +TFN ++D K + +M +R + D T+ + L K F
Sbjct: 253 NLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMF 312
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
M C L+ N ++K C+ K V + L ++S + + + Y LI+G
Sbjct: 313 EFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHD 372
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
GD A K++ M +G P I +++ K ++A++VF M+ + L +
Sbjct: 373 GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK-LDIYI 431
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y +I+ MCK GK+ + + + +G++ + +T +++I GL ++ L+EAY ++++++
Sbjct: 432 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 491
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGC 345
+ PD Y+ LI+ LR + ++ REM R C
Sbjct: 492 EDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM--RSC 528
>gi|410109945|gb|AFV61052.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rubella]
Length = 394
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 139/288 (48%), Gaps = 41/288 (14%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T + L L +++ K + F+ + + G SL N ++ C+ + + A+ + +
Sbjct: 91 TCRKVLEHLMKLKYFKLVWGFYKEILESGYPASLYFFNILMHRFCKERDIRVAQSVFDAI 150
Query: 170 SEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++W ++P+ ++Y L+ GY +GDL E ++ + M G +P + +I K +K
Sbjct: 151 TKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKM 210
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
D+A ++F M VK + G+ T+ +ID CK G++ A + ++M + + D +T ++
Sbjct: 211 DDANELFDEMLVKGLVPNGV-TFTTLIDGHCKNGRVDLALEIYKQMLSQSLLPDLITYNT 269
Query: 289 IIYGLLARGRLREAYKVVEEIE----KPD------------------------------- 313
+IYGL +G L++A+ +++E+ KPD
Sbjct: 270 LIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTALIDGCCKEGDLDTAFEHRKRMIQEN 329
Query: 314 ISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
I L Y LI GL + R+ +A ++ REM+ G +P TY M++
Sbjct: 330 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIIN 377
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 93/237 (39%), Gaps = 71/237 (29%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
N +TF ++D K+ +DL E ++M + L+ D
Sbjct: 228 NGVTFTTLIDGHCKNGRVDLALEIYKQMLSQSLLPD------------------------ 263
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVG 191
L N ++ LC++ + +A LI ++S + +KP++I Y LI G C G
Sbjct: 264 ----------LITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTALIDGCCKEG 313
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTY 251
DL D FE ++ + I R+DD+ Y
Sbjct: 314 DL-----------DTAFEHRKRMIQENI----------------------RLDDVA---Y 337
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
+I +C+ G+ A ML EM G++ D T + II +G + + K+++E
Sbjct: 338 TALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKE 394
>gi|255660816|gb|ACU25577.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 418
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 154/346 (44%), Gaps = 36/346 (10%)
Query: 104 RLVNDKTFKIALMTLAEVRE-------LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQR 156
RL + F++ T +V E K + F+ +CG SL N ++ C+
Sbjct: 90 RLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEDSLECGYPASLYFFNILMHRFCKE 149
Query: 157 KLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVV 215
+ A+ + +++W ++P +++ L+ GY +GDL E ++ N M G +P +
Sbjct: 150 GEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEGFRLKNAMQASGVQPDVYTY 209
Query: 216 DKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMF 275
+I K +K D A ++F M + G+ T+ +ID CK G++ A + ++M
Sbjct: 210 SVLINGLCKESKMDYANELFNEMLDNGLVPNGV-TFTTLIDGHCKNGRVDLAMEIYKQML 268
Query: 276 KRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAR 331
+ + D +T +++IYGL +G L++A +++E+ KPD Y LI G +
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLIDGSCKEGDLE 328
Query: 332 EATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDA 391
A + + MIK Y T + GL + G+S+DA
Sbjct: 329 TAFEYRKRMIKENIRLDDVAY-----------------------TALISGLCQEGRSVDA 365
Query: 392 AKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVG 437
K + +++ G++ Y ++ + + V ++ K+++ G
Sbjct: 366 EKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDG 411
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 88/208 (42%), Gaps = 38/208 (18%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
N +TF ++D K+ +DL E ++M + L D
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPD------------------------ 275
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVG 191
L N ++ LC++ + +A+ LI ++S + +KP+++ Y LI G C G
Sbjct: 276 ----------LITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLIDGSCKEG 325
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLST 250
DL A + M E +I + + +A K+ +M+ V ++G T
Sbjct: 326 DLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG--T 383
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRG 278
Y ++I+ CK+G + +++EM + G
Sbjct: 384 YTMIINEFCKKGDVWTGSKLMKEMQRDG 411
>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 154/346 (44%), Gaps = 26/346 (7%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
N +F + + + ++ + + + F M CE + ++ LC+ + EA L+
Sbjct: 187 NVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLL 246
Query: 167 LKLS-EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI 225
++ E P+ + + LI G C GD++ +K+ + M +G P+ + +I
Sbjct: 247 DEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLK 306
Query: 226 NKDDEAMKVFQMMRVKRM--DDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADN 283
K D+A+ + M + +D+ TY +I+ + K+G+ +L + +RG A+
Sbjct: 307 GKLDKAVSLLDRMVASKCVPNDV---TYGTLINGLVKQGRSVDGVHLLSSLEERGHHANE 363
Query: 284 LTLSSIIYGLLARGRLREAY----KVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFRE 339
S++I GL + EA K+VE+ +P+I +Y LI GL R + EA ++ E
Sbjct: 364 YAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCE 423
Query: 340 MIKRGCEPTMHTYIMLLQGHL------------GKRGRKGPDPLVNFDTIFVGGLVKAGK 387
M+ +GC P TY L++G + + P ++ + GL + GK
Sbjct: 424 MVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGK 483
Query: 388 SLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKL 433
+A ++ RG+ Y+ +H N V EVG KL
Sbjct: 484 LREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSV----EVGLKL 525
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/405 (20%), Positives = 183/405 (45%), Gaps = 36/405 (8%)
Query: 56 VYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGR-RRLVNDKTFKIA 114
Y+F +Q + TF +++ S + ++ M R RR+ +K F +
Sbjct: 64 TYIFKSASQMGS--YKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILV 121
Query: 115 LMTLAEVRELKKMVNFF-HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW- 172
+ +K + F ++++ C ++ N V+ + Q L A L+ E
Sbjct: 122 FRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRA----LEFYECG 177
Query: 173 ------IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKIN 226
I PN +++ +IK C +G + A +++ M + EP + +++ K +
Sbjct: 178 VGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKED 237
Query: 227 KDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTL 286
+ DEA+ + M+++ + T+ ++I+ +CK+G + + +++ MF +G + +T
Sbjct: 238 RIDEAVLLLDEMQIEGCFPSSV-TFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTY 296
Query: 287 SSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIK 342
++II GL +G+L +A +++ + P+ Y LI GL++ R+ + + + +
Sbjct: 297 NTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEE 356
Query: 343 RGCEPTMHTYIMLLQG---------HLG---KRGRKGPDPLVNFDTIFVGGLVKAGKSLD 390
RG + Y L+ G +G K KG P + + + GL + GK +
Sbjct: 357 RGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDE 416
Query: 391 AAKYVERVMNRGVEVPRFDYNK----FLHYYSNEEGVVMFEEVGK 431
A + + ++N+G F Y+ F ++++ + +++E+ K
Sbjct: 417 AKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAK 461
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 109/261 (41%), Gaps = 42/261 (16%)
Query: 73 NSITFNRMVD-IIGKSRNID--LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
N +T+ +++ ++ + R++D +L+E G N+ + + L + + ++ +
Sbjct: 327 NDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHH--ANEYAYSTLISGLFKEEKSEEAMG 384
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL------------SEWIK--- 174
+ M + GC+ ++ + + ++ LC+ + EAK ++ ++ S IK
Sbjct: 385 LWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFF 444
Query: 175 ---------------------PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSID 213
PNEI Y LI G C+ G L EA +W M G P +
Sbjct: 445 KTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVV 504
Query: 214 VVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL-GLSTYRIVIDWMCKRGKISQAYTMLE 272
MI + +K+F M + D + TY I++ +CK+ IS A +L
Sbjct: 505 AYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLN 564
Query: 273 EMFKRGIEADNLTLSSIIYGL 293
M RG D +T + + L
Sbjct: 565 SMLDRGCNPDLITCNIFLNAL 585
>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 520
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 146/296 (49%), Gaps = 8/296 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+ ++ ++D + K + +D ++ EM R + D T+ + +L + +
Sbjct: 151 VMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNE 210
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGD 192
M ++ N ++ TLC+ V E+K L+ +++ +KP+ + Y L+ GYC VG+
Sbjct: 211 MILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGE 270
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+ +A +I+ +M G P + + +I K + DEAM + + M K M TY
Sbjct: 271 VQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIP-DTVTYS 329
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA----YKVVEE 308
+ID +CK G+I+ + +EM RG A+ +T +S++ GL L +A K+ E
Sbjct: 330 SLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKER 389
Query: 309 IEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
+P+ Y LI GL + R ++ +F+ ++ +G + TY +++ G L K G
Sbjct: 390 GIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISG-LCKEG 444
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 134/295 (45%), Gaps = 40/295 (13%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
++ I L L ++ E + + + D + M + ++ LC+ KLV EA L ++
Sbjct: 117 SYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEM 176
Query: 170 -SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
+ I P+ I Y LI G+C G L+EA + N M + P+I + +I+T K K
Sbjct: 177 NARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKV 236
Query: 229 DEAMKVFQMMRVKR-----------MDDLGLS-----------------------TYRIV 254
E+ + +M K MD L +Y I+
Sbjct: 237 KESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNII 296
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----E 310
I+ +CK ++ +A +L EM + + D +T SS+I GL GR+ + +E+ +
Sbjct: 297 INGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQ 356
Query: 311 KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
++ Y+ L+ GL + + +A +F +M +RG +P +TY L+ G L K GR
Sbjct: 357 PANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDG-LCKGGR 410
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 124/259 (47%), Gaps = 24/259 (9%)
Query: 166 ILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI 225
ILKL +PN I L+KG C G++ ++ + + +GF+ ++ KI
Sbjct: 71 ILKLG--YQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKI 128
Query: 226 NKDDEAMKVFQMM--RVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADN 283
+ A+K+ + + R R D + Y +ID +CK + +AY + EM RGI D
Sbjct: 129 GETRCAIKLLRTIEDRSTRPD---VVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDV 185
Query: 284 LTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFRE 339
+T +++I G G+L EA+ ++ E+ P+I Y+ LI L + + +E+ +
Sbjct: 186 ITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAV 245
Query: 340 MIKRGCEPTMHTYIMLLQGH--LGKRGRK----------GPDPLVNFDTIFVGGLVKAGK 387
M K+G +P + Y +L+ G+ +G+ + G +P V I + GL K GK
Sbjct: 246 MTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCK-GK 304
Query: 388 SLDAAKYVERVMNRGVEVP 406
+D A + R M +P
Sbjct: 305 RVDEAMNLLREMLHKNMIP 323
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 125/281 (44%), Gaps = 7/281 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKT-FKIALMTLAEVRELKKMVNFF 131
N T+N ++D + K + L M ++ + D + I + V E++K F
Sbjct: 219 NIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIF 278
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDV 190
+M G + N ++ LC+ K V EA L+ + L + + P+ + Y LI G C +
Sbjct: 279 LVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKL 338
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G + + M G ++ + +++ K D+A+ +F M+ +R T
Sbjct: 339 GRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMK-ERGIQPNKYT 397
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y +ID +CK G++ + + + + +G D T + +I GL G EA + ++E
Sbjct: 398 YTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKME 457
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
P+ + +I+ LL +A ++ EMI +G P
Sbjct: 458 DNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498
>gi|12321310|gb|AAG50731.1|AC079041_24 PPR-repeat protein, putative [Arabidopsis thaliana]
Length = 690
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 154/334 (46%), Gaps = 17/334 (5%)
Query: 40 EFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQE 99
+F ++ C + + + + +F Y+ + +S+ RM++ + S +DL + +
Sbjct: 150 KFLMECCCRYGMVDKALEIFV-YSTQLGVVIPQDSVY--RMLNSLIGSDRVDLIADHFDK 206
Query: 100 MGRRRL----VNDKTFKI-ALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLC 154
+ R + V+ F + AL EV K ++F ++ + G + NKV+K L
Sbjct: 207 LCRGGIEPSGVSAHGFVLDALFCKGEV---TKALDFHRLVMERGFRVGIVSCNKVLKGLS 263
Query: 155 QRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDV 214
++ V ++ L L L PN + + LI G+C G++ A ++ +M G EP +
Sbjct: 264 VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIA 323
Query: 215 VDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEM 274
+I+ +FK K+F K + L + + ID K G ++ A + + M
Sbjct: 324 YSTLIDGYFKAGMLGMGHKLFSQALHKGV-KLDVVVFSSTIDVYVKSGDLATASVVYKRM 382
Query: 275 FKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRA 330
+GI + +T + +I GL GR+ EA+ + +I K P I Y LI G +
Sbjct: 383 LCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNL 442
Query: 331 REATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG 364
R ++ +MIK G P + Y +L+ G L K+G
Sbjct: 443 RSGFALYEDMIKMGYPPDVVIYGVLVDG-LSKQG 475
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 138/310 (44%), Gaps = 49/310 (15%)
Query: 95 ETLQEMGRRRLVNDKTFKIALMTLAEV------RELKKMVNFFHIMNDCGCEYSLEMLNK 148
E + + RLV ++ F++ +++ +V +++ ++ DCG ++
Sbjct: 232 EVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCT 291
Query: 149 VVKTLCQRKLVVEAKYLILKLSE--WIKPNEIAYGWLIKGY------------------- 187
++ C+R + A + + K+ E I+P+ IAY LI GY
Sbjct: 292 LINGFCKRGEMDRA-FDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHK 350
Query: 188 ------------CDV----GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEA 231
DV GDL AS ++ M +G P++ +I+ + + EA
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA 410
Query: 232 MKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
++ + +KR + + TY +ID CK G + + + E+M K G D + ++
Sbjct: 411 FGMYGQI-LKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 469
Query: 292 GLLARG----RLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
GL +G +R + K++ + + ++ +++ LI G RL R EA +VFR M G +P
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP 529
Query: 348 TMHTYIMLLQ 357
+ T+ +++
Sbjct: 530 DVATFTTVMR 539
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 97/193 (50%), Gaps = 5/193 (2%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+ + YG L+ G G ++ A + M + ++ V + +I+ + ++N+ DEA+KV
Sbjct: 459 PDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKV 518
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
F++M + + ++T+ V+ G++ +A + MFK G+E D L ++I
Sbjct: 519 FRLMGIYGIKP-DVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFC 577
Query: 295 ARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
+ ++ + +++ DI++ + +I L + R +A++ F +I+ EP +
Sbjct: 578 KHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIV 637
Query: 351 TYIMLLQGHLGKR 363
TY ++ G+ R
Sbjct: 638 TYNTMICGYCSLR 650
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 101/218 (46%), Gaps = 14/218 (6%)
Query: 149 VVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEG 207
+V L ++ L++ A ++ + L + I+ N + + LI G+C + EA K++ LM G
Sbjct: 467 LVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYG 526
Query: 208 FEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGK 263
+P + ++ + +EA+ +F RM +GL Y +ID CK K
Sbjct: 527 IKPDVATFTTVMRVSIMEGRLEEALFLFF-----RMFKMGLEPDALAYCTLIDAFCKHMK 581
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK----VVEEIEKPDISLYHG 319
+ + + M + I AD + +I+ L R+ +A K ++E +PDI Y+
Sbjct: 582 PTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNT 641
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
+I G LRR EA ++F + P T +L+
Sbjct: 642 MICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIH 679
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 88/190 (46%), Gaps = 6/190 (3%)
Query: 182 WLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK 241
+L++ C G + +A +I+ T G D V +M+ + ++ D F +
Sbjct: 151 FLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRG 210
Query: 242 RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
++ G+S + V+D + +G++++A + +RG ++ + ++ G L+ ++
Sbjct: 211 GIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKG-LSVDQIEV 269
Query: 302 AYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
A +++ + P++ + LI G + A +F+ M +RG EP + Y L+
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329
Query: 358 GHLGKRGRKG 367
G+ K G G
Sbjct: 330 GYF-KAGMLG 338
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 177/389 (45%), Gaps = 37/389 (9%)
Query: 54 RPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFK 112
+ +LF + + P + +T+N ++D + K++ +D LQ M + ++ D +T+
Sbjct: 218 KAYFLFHEMMGQGLP---PDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYN 274
Query: 113 IALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SE 171
I + + +L++ V M+ G + + + +++ C+ EA+ + + +
Sbjct: 275 IMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRK 334
Query: 172 WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEA 231
KPN Y L+ GY G LI+ + +LM +G + +I + K D+A
Sbjct: 335 GQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKA 394
Query: 232 MKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
M F MR + + +Y VI +CK G++ A +M G+ + ++ +S+I+
Sbjct: 395 MTAFTEMRQNGLRP-DVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIH 453
Query: 292 GLLARGRLRE----AYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
GL + G ++ A++++ PD + ++ L + R EA F +I G +P
Sbjct: 454 GLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKP 513
Query: 348 TMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPR 407
+ +Y L+ G+ FVG + ++ K LD R+++ G+
Sbjct: 514 DVVSYNTLIDGY-----------------CFVGKMDESIKQLD------RMVSIGLRPDS 550
Query: 408 FDYNKFLH-YYSN---EEGVVMFEEVGKK 432
+ YN L+ Y+ N E+ + ++ E+ +K
Sbjct: 551 WTYNSLLNGYFKNGRVEDALALYREMFRK 579
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 138/312 (44%), Gaps = 18/312 (5%)
Query: 123 ELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYG 181
E+ K FH M G + N ++ LC+ + + +A ++ + + + P+ Y
Sbjct: 215 EVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYN 274
Query: 182 WLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK 241
+I+GYC +G L EA ++ M+ G +P + +I+ + KI + EA VF M V+
Sbjct: 275 IMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSM-VR 333
Query: 242 RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
+ + Y I++ +G + +L+ M + GI ++ + +I G + +
Sbjct: 334 KGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDK 393
Query: 302 AYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
A E+ +PD+ Y +I L + R +A F +M+ G P + ++ L+
Sbjct: 394 AMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIH 453
Query: 358 G--HLGKRGR----------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEV 405
G +G+ + +G P F + L K G+ ++A + + V++ GV+
Sbjct: 454 GLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKP 513
Query: 406 PRFDYNKFLHYY 417
YN + Y
Sbjct: 514 DVVSYNTLIDGY 525
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 147/305 (48%), Gaps = 7/305 (2%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNI-DLFWETLQEMGRRRLVNDKTFKIALMTLAE 120
+T+ Q + ++++ ++ I+ K+ + D + Q + N +F + L
Sbjct: 398 FTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCS 457
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAK-YLILKLSEWIKPNEIA 179
+ E KK+ M + G +N ++ LC+ VVEA+ + + + +KP+ ++
Sbjct: 458 IGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVS 517
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
Y LI GYC VG + E+ K + M G P + ++ +FK + ++A+ +++ M
Sbjct: 518 YNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMF 577
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
K + + T I++ + + G+I A + +M RG + T ++++ GL +
Sbjct: 578 RKDVKFCAI-TSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCV 636
Query: 300 REAYKVVEEIEKP----DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
EA ++ E++ D+ + +I LL++ R EA +F M+ RG P + TY ++
Sbjct: 637 DEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLM 696
Query: 356 LQGHL 360
++ H+
Sbjct: 697 IKSHI 701
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 123/280 (43%), Gaps = 19/280 (6%)
Query: 178 IAYGWLIKGYCDVGDLIEA-SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
+ LIKG CD +A ++ M + G+ P + + +I+ K EA+++
Sbjct: 127 VTLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLI 186
Query: 237 MMRVKRMDDLG--LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
M + + +Y VID K G++ +AY + EM +G+ D +T +S+I GL
Sbjct: 187 HMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLC 246
Query: 295 ARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
+ +A +++ + PD Y+ +I+G L + EA ++ ++M G +P +
Sbjct: 247 KAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVV 306
Query: 351 TYIMLLQGH--LGKRG----------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERV 398
TY +L+Q + +G+ RKG P I + G G +D ++ +
Sbjct: 307 TYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLM 366
Query: 399 MNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
+ G+ +N + Y+ V ++R+ GL
Sbjct: 367 IRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGL 406
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 71/139 (51%), Gaps = 1/139 (0%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
+K I ++ G G ++ A +++ M D G + I+ + ++ + + DEA+
Sbjct: 581 VKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEAL 640
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
++F+ +R K + L + T+ IVI+ + K G+I +A ++ M RG D +T S +I
Sbjct: 641 RMFEDLRSKEFE-LDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKS 699
Query: 293 LLARGRLREAYKVVEEIEK 311
+ G L E+ + +EK
Sbjct: 700 HIEEGLLEESDNLFLSMEK 718
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 82/171 (47%), Gaps = 2/171 (1%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLSEWIKPNEI-AYGWLIKGYCDVGDLIEASKIWNLMTD 205
N ++ L Q +V A+ L +K+ + I Y ++ G C+ + EA +++ +
Sbjct: 589 NIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRS 648
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKIS 265
+ FE + +I K+ + DEA +F M V R + TY ++I + G +
Sbjct: 649 KEFELDVRTFSIVINALLKVGRIDEAKSLFSAM-VLRGPVPDVITYSLMIKSHIEEGLLE 707
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISL 316
++ + M K G AD+ L+ I+ LL +G +R A + +I++ + SL
Sbjct: 708 ESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEKNFSL 758
>gi|224107983|ref|XP_002314677.1| predicted protein [Populus trichocarpa]
gi|222863717|gb|EEF00848.1| predicted protein [Populus trichocarpa]
Length = 481
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 155/357 (43%), Gaps = 8/357 (2%)
Query: 6 GHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQK 65
G + +V IL ++ + E + +L N T++ Q+ F W F + K
Sbjct: 33 GDIDKVKGIL-KRHFPSEDAVVKALDESGINATNDLVSQLLERFSNQWITALGVFIWA-K 90
Query: 66 AQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGR-RRLVNDKTFKIALMTLAEVREL 124
Q + H ++ +VDI+GK + + W+ + EM V+ T I + LA
Sbjct: 91 NQTGYVHTPRLYDLVVDILGKCKKFGIMWKVVNEMNELNGQVSFSTMSIVVRRLASSGMY 150
Query: 125 KKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLI 184
K +++ + + LN V+ L ++ +A + L+ + I + ++ LI
Sbjct: 151 KDVIDVLRGLEKYRVKKDTVALNMVMHALAKQGGAKDAYSVFLEFKDSITLDSHSFNILI 210
Query: 185 KGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD 244
GYC+ L +A K M GF P I+ + K KD ++V ++
Sbjct: 211 HGYCEARMLDDARKTMEEMEKHGFRPDASSYTCFIKAYCK-QKDFRNVEVILNEMGEKGC 269
Query: 245 DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK 304
+ + Y I I + K KI++A + E+M K + D S++IY L GRL +A+
Sbjct: 270 EPDVIAYSIYIRALGKARKINEALEVYEKMNKNSCKPDAKFFSTLIYVLGRSGRLNDAWY 329
Query: 305 VVEEIEKPDIS----LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
V E++E +S Y+ +I R+ A ++ M C+P + TY LL+
Sbjct: 330 VFEDMENHGVSRDLWTYNAMIYHACANRQGNSALKLLERMEVNSCKPDLETYQPLLK 386
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 89/203 (43%), Gaps = 29/203 (14%)
Query: 247 GLSTYRI---------VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
GL YR+ V+ + K+G AY++ E FK I D+ + + +I+G
Sbjct: 159 GLEKYRVKKDTVALNMVMHALAKQGGAKDAYSVFLE-FKDSITLDSHSFNILIHGYCEAR 217
Query: 298 RLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYI 353
L +A K +EE+EK PD S Y IK + + R + EM ++GCEP + Y
Sbjct: 218 MLDDARKTMEEMEKHGFRPDASSYTCFIKAYCKQKDFRNVEVILNEMGEKGCEPDVIAYS 277
Query: 354 MLLQGHLGKR-------------GRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMN 400
+ ++ LGK + P F + + L ++G+ DA E + N
Sbjct: 278 IYIRA-LGKARKINEALEVYEKMNKNSCKPDAKFFSTLIYVLGRSGRLNDAWYVFEDMEN 336
Query: 401 RGVEVPRFDYNKFL-HYYSNEEG 422
GV + YN + H +N +G
Sbjct: 337 HGVSRDLWTYNAMIYHACANRQG 359
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 101/232 (43%), Gaps = 3/232 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFF 131
+S +FN ++ ++R +D +T++EM + D ++ + + ++ + +
Sbjct: 202 DSHSFNILIHGYCEARMLDDARKTMEEMEKHGFRPDASSYTCFIKAYCKQKDFRNVEVIL 261
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
+ M + GCE + + ++ L + + + EA + K+++ KP+ + LI
Sbjct: 262 NEMGEKGCEPDVIAYSIYIRALGKARKINEALEVYEKMNKNSCKPDAKFFSTLIYVLGRS 321
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G L +A ++ M + G + + MI + + A+K+ + M V L T
Sbjct: 322 GRLNDAWYVFEDMENHGVSRDLWTYNAMIYHACANRQGNSALKLLERMEVNSCKP-DLET 380
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
Y+ ++ CK + +L MF + D T + +I L G+L A
Sbjct: 381 YQPLLKMCCKMKDMKVLKFLLSHMFNNNVRIDLSTYALLIRELAESGKLEHA 432
>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
Length = 798
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 90/398 (22%), Positives = 169/398 (42%), Gaps = 34/398 (8%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRR-RLVNDKTFKIALMT 117
+ + Q + + +T+N ++ + K+R +D L M + + N T L
Sbjct: 223 YHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHG 282
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPN 176
+ + F M G E + N ++ LC+ +EA+ + + + KPN
Sbjct: 283 YCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPN 342
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
YG L+ GY G L++ + ++M G +P + + +I T+ K K D+AM +F
Sbjct: 343 SATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFS 402
Query: 237 MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR 296
MR + ++ TY IV+D +C GK+ A + G+ D + ++I+GL AR
Sbjct: 403 KMRRQGLNP-DTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCAR 461
Query: 297 GRLREAYKV-VEEIEK---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
+ +A ++ VE I + P+ ++ L+ L + A +F M++ + + TY
Sbjct: 462 DKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITY 521
Query: 353 IMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNK 412
L+ G+ GK +AAK +E ++ GV+ YN
Sbjct: 522 NTLIDGY-----------------------CLHGKVDEAAKLLEGMVLDGVKPNEVTYNT 558
Query: 413 FLHYYSN----EEGVVMFEEVGKKLREVGLADLADIFQ 446
++ Y E+ +F ++ K G+ + I Q
Sbjct: 559 MINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQ 596
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 153/383 (39%), Gaps = 67/383 (17%)
Query: 56 VYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIAL 115
+ LF + A+P N IT++ ++D + ++DL + L + R
Sbjct: 73 ISLFRRMVMVARPKVPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRS------------ 120
Query: 116 MTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWI-- 173
G + ++K LC +K EA + L+ +
Sbjct: 121 ----------------------GWTAEAITFSPLLKALCDKKRTSEAMDIALRRMPVLGC 158
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLM-----TDEGFEPSIDVVDKMIETFFKINKD 228
PN +Y L+KG CD +A + + M T G+ P + + +I + +
Sbjct: 159 TPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQ 218
Query: 229 -DEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADN 283
D A +F +M D GLS TY +I + K + +A +L M K G +
Sbjct: 219 LDTAYHLFD-----QMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNR 273
Query: 284 LTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFRE 339
+T +S+++G + G+ +A V + + + PD+ Y+ L+ L + R+ EA ++F
Sbjct: 274 ITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDS 333
Query: 340 MIKRGCEPTMHTYIMLLQGH------------LGKRGRKGPDPLVNFDTIFVGGLVKAGK 387
M+KRG +P TY LL G+ L R G P I +G K GK
Sbjct: 334 MVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGK 393
Query: 388 SLDAAKYVERVMNRGVEVPRFDY 410
DA ++ +G+ Y
Sbjct: 394 VDDAMLLFSKMRRQGLNPDTVTY 416
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 119/278 (42%), Gaps = 30/278 (10%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
+ PN I Y +I VG L A + G+ +++ + EAM
Sbjct: 87 VPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAM 146
Query: 233 KVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMF-----KRGIEADN 283
+ ++RM LG + +Y I++ +C + QA +L M + G D
Sbjct: 147 DI----ALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDV 202
Query: 284 LTLSSIIYGLLARGR-LREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFR 338
++ +++I GLL GR L AY + +++ PD+ Y+ +I L + R +A V
Sbjct: 203 VSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLV 262
Query: 339 EMIKRGCEPTMHTYIMLLQGHL--GKRG----------RKGPDPLVNFDTIFVGGLVKAG 386
M+K G P T+ LL G+ GK R G +P V +G L K G
Sbjct: 263 RMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNG 322
Query: 387 KSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVV 424
+S++A K + ++ RG + Y LH Y+ E +V
Sbjct: 323 RSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLV 360
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 135/348 (38%), Gaps = 44/348 (12%)
Query: 94 WETLQEM-----GRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNK 148
W+ +E+ GR N+ F L L + + + N F +M + + N
Sbjct: 464 WDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNT 523
Query: 149 VVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEG 207
++ C V EA L+ + + +KPNE+ Y +I GYC G + +A ++ M +G
Sbjct: 524 LIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKG 583
Query: 208 FEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQA 267
P I +++ F+ + A +++ M +K + TY I++ +C+ A
Sbjct: 584 VNPGIVTYSTILQGLFQARRTAAAKELYLWM-IKSGIKFDIGTYNIILLGLCQNNCTDDA 642
Query: 268 YTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKG 323
+ + ++ +N T + +I LL GR EA + + P++ Y ++K
Sbjct: 643 LRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKS 702
Query: 324 LLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLV 383
L+ E +F + K GC +L +GK +KG
Sbjct: 703 LIEQGLLEELDDLFLSLEKNGCTANSR----MLNALVGKLLQKG---------------- 742
Query: 384 KAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGK 431
V GV + + D N F S E +V+ GK
Sbjct: 743 -------------EVRKAGVYLSKIDENNFSLEASTAESLVLLVSSGK 777
>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g12700, mitochondrial-like
[Glycine max]
Length = 555
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 146/296 (49%), Gaps = 16/296 (5%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALM----TLAEVRELKKMV 128
N IT++ ++D + K R I + R ++ D +L+ ++ + RE +++
Sbjct: 194 NLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLL 253
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAK---YLILKLSEWIKPNEIAYGWLIK 185
N +Y+ +L V LC+ +VEA+ +++K E KP+ + Y L++
Sbjct: 254 TMMVRGNINPDDYTFNIL---VDALCKEGRIVEAQGVFAVMMKRGE--KPDIVTYNALME 308
Query: 186 GYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD 245
G+C ++ EA +++N M G EP + + +I + KI+ DEAM +F+ +R K +
Sbjct: 309 GFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVP 368
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
L+TY +ID +CK G++S +++EM RG D +T + + +A +
Sbjct: 369 -NLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISL 427
Query: 306 VEEIEK---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+I + PD +Y +++ + + + A + + ++ GC P + TY +++
Sbjct: 428 FRQIVQGIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINA 483
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 138/313 (44%), Gaps = 22/313 (7%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKP-NEIAYGWLIKGYCDVGDLIEA 196
G + ++ N ++ C +V +A L L P +E +YG LI G C G +A
Sbjct: 120 GFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDA 179
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVID 256
++ M ++ P++ +I+ K +A+++F ++ R + + Y +I
Sbjct: 180 LQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLV-TSRGILVDVVAYNSLIH 238
Query: 257 WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKP 312
C G+ +A +L M + I D+ T + ++ L GR+ EA V + EKP
Sbjct: 239 GCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKP 298
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH-----------LG 361
DI Y+ L++G EA ++F M+KRG EP + Y +L+ G+ L
Sbjct: 299 DIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLF 358
Query: 362 KRGR-KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN- 419
K R K P + + GL K G+ + V+ + +RG YN FL +
Sbjct: 359 KEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKS 418
Query: 420 ---EEGVVMFEEV 429
E+ + +F ++
Sbjct: 419 KPYEKAISLFRQI 431
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 142/306 (46%), Gaps = 25/306 (8%)
Query: 148 KVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDE 206
++ LC+ +A L+ K+ E ++PN I Y +I G C + +A ++++L+T
Sbjct: 165 SLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSR 224
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM--DDLGLSTYRIVIDWMCKRGKI 264
G + + +I + + EA ++ MM + DD T+ I++D +CK G+I
Sbjct: 225 GILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDY---TFNILVDALCKEGRI 281
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGL 320
+A + M KRG + D +T ++++ G + EA ++ + K PD+ Y+ L
Sbjct: 282 VEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVL 341
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR-------------KG 367
I G ++ EA +F+E+ + P + TY L+ G L K GR +G
Sbjct: 342 INGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDG-LCKLGRMSCVQELVDEMCDRG 400
Query: 368 PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFE 427
P + IF+ K+ K + A + R + +G+ + Y+ + + E + + E
Sbjct: 401 QSPDIVTYNIFLDAFCKS-KPYEKAISLFRQIVQGIWPDFYMYDVIVENFCKGEKLKIAE 459
Query: 428 EVGKKL 433
E + L
Sbjct: 460 EALQHL 465
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 136/311 (43%), Gaps = 26/311 (8%)
Query: 170 SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD 229
S+ I P+ LI YC L A + + GF+P++ + +I F
Sbjct: 83 SKGITPSIATLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVS 142
Query: 230 EAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSI 289
+AM F++ + + L +Y +I+ +CK G+ A +L++M + + + +T S++
Sbjct: 143 KAM-AFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTV 201
Query: 290 IYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGC 345
I GL + +A ++ + D+ Y+ LI G + + REAT++ M++
Sbjct: 202 IDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNI 261
Query: 346 EPTMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAA 392
P +T+ +L+ L K GR +G P + + G + +A
Sbjct: 262 NPDDYTFNILVDA-LCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEAR 320
Query: 393 KYVERVMNRGVEVPRFDYNKFLHYYSN----EEGVVMFEEVGKKLREVGLA---DLADIF 445
+ R++ RG+E +YN ++ Y +E +V+F+E+ K LA L D
Sbjct: 321 ELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGL 380
Query: 446 QRYGKKMATRE 456
+ G+ +E
Sbjct: 381 CKLGRMSCVQE 391
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 121/286 (42%), Gaps = 29/286 (10%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P + L+ +G A +++ + +G PSI + +I + +A
Sbjct: 53 PPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCH-----QAHLS 107
Query: 235 FQMMRVKRMDDLG----LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
F + + +G + T+ +I+ C G +S+A ++ +G D + S+I
Sbjct: 108 FAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLI 167
Query: 291 YGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
GL G+ R+A ++++++E +P++ Y +I GL + R +A ++F + RG
Sbjct: 168 NGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGIL 227
Query: 347 PTMHTYIMLLQG--HLGK------------RGRKGPDPLVNFDTIFVGGLVKAGKSLDAA 392
+ Y L+ G +G+ RG PD F+ I V L K G+ ++A
Sbjct: 228 VDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYT-FN-ILVDALCKEGRIVEAQ 285
Query: 393 KYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
+M RG + YN + + V E+ ++ + GL
Sbjct: 286 GVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGL 331
>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
Length = 439
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 165/386 (42%), Gaps = 67/386 (17%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
N TF+ ++ + K+ + E +M R V N + + L +L + + + + F
Sbjct: 2 NRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAIF 61
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE--WIKPNEIAYGWLIKGYCD 189
+ C S+ LN ++ C+ +L+ +A L ++ + + P Y +IK YC
Sbjct: 62 RGIQ---CSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCK 118
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVV--DKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
+ L +A ++ +E S DV+ + F K + DEA ++ M K+
Sbjct: 119 MDRLDQARQLL----EESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPD 174
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGI---------------------------- 279
+ + ++I CK G++ +AY MLE + G
Sbjct: 175 IVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFK 234
Query: 280 ---------EADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLR 326
E + +T +++I GL RL A+++V++++ + D Y L+ GL +
Sbjct: 235 VLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCK 294
Query: 327 LRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR-------------KGPDPLVN 373
R E ++VF EM++ GC P++ TY L+ H K G KG P V
Sbjct: 295 QGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHC-KAGSLQDAQQVIRSMVAKGIPPDVT 353
Query: 374 FDTIFVGGLVKAGKSLDAAKYVERVM 399
T+ + GL + GK A ++ E+++
Sbjct: 354 TYTVLLEGLFENGKVRTATEFFEKIL 379
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 121/292 (41%), Gaps = 55/292 (18%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
PN + LI G C G L EA + +N M + P++ ++ ++ + + D+AM +
Sbjct: 1 PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60
Query: 235 FQMMRVK----------------RMDDLGL----------------STYRIVIDWMCKRG 262
F+ ++ ++ D L +TY +I CK
Sbjct: 61 FRGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMD 120
Query: 263 KISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI-----EKPDISLY 317
++ QA +LEE +D + ++S+ G R+ EAY+++ ++ KPDI +
Sbjct: 121 RLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAW 178
Query: 318 HGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH---------------LGK 362
+ +I G + R REA ++ ++ GC P TY L+ G L
Sbjct: 179 NVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSS 238
Query: 363 RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
R +V F+ + + GL KA + A + V+++ R + F Y +
Sbjct: 239 RDHHAEPNVVTFNAL-ISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLM 289
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 118/263 (44%), Gaps = 48/263 (18%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT- 204
N ++ C+ V EA ++ L S PN + Y LI G+C G+L EA +++ +++
Sbjct: 179 NVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSS 238
Query: 205 -DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK--RMDDLGLSTYRIVIDWMCKR 261
D EP++ + +I K ++ + A ++ + M+ + R D TY ++D +CK+
Sbjct: 239 RDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTF---TYTTLMDGLCKQ 295
Query: 262 GKISQAYTMLEEMFK-----------------------------------RGIEADNLTL 286
G+ S+ + EEM + +GI D T
Sbjct: 296 GRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTY 355
Query: 287 SSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIK 342
+ ++ GL G++R A + E+I + P +Y L++G + EA + + EM+
Sbjct: 356 TVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLD 415
Query: 343 RGCEPTMHTYIMLLQGHLGKRGR 365
R P T +L++ L KRGR
Sbjct: 416 RRLAPDPATCKLLVE-MLCKRGR 437
>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 128/256 (50%), Gaps = 9/256 (3%)
Query: 111 FKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQ--RKLVVEAKYLILK 168
F L ++A+++ +++ H M+ G ++ L+ ++ + C R + EA +L K
Sbjct: 64 FNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRGKIGEALHLFDK 123
Query: 169 L-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINK 227
+ E +P+ + YG LI G C VG+ A ++ M + +P++ + +I++ K +
Sbjct: 124 MIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQ 183
Query: 228 DDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLS 287
EA +F M K + + TY +I +C + T+L EM I D ++ +
Sbjct: 184 VTEAFNLFSEMVTKGISP-DIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFN 242
Query: 288 SIIYGLLARGRLREAYKVVEEIEK-----PDISLYHGLIKGLLRLRRAREATQVFREMIK 342
+++ L G++ EA+ VV+++ + P++ Y+ LI G +++R +A +F EM +
Sbjct: 243 TVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCR 302
Query: 343 RGCEPTMHTYIMLLQG 358
+ P TY L+ G
Sbjct: 303 QELIPDTVTYSTLIHG 318
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 134/304 (44%), Gaps = 12/304 (3%)
Query: 64 QKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVR 122
+ QP N +N ++D + K R + + EM + + D T+ + L +
Sbjct: 162 KNCQP----NVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLC 217
Query: 123 ELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE--WIKPNEIAY 180
E K + + M D + N VV LC+ V EA ++ K+ + PN I+Y
Sbjct: 218 EWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISY 277
Query: 181 GWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
LI GYC + + +A ++ M + P +I + + +A+ +F M V
Sbjct: 278 NTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEM-V 336
Query: 241 KRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
L TYRI++D++CK +++A +L+ + ++ D + I G+ G L
Sbjct: 337 ACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELE 396
Query: 301 EAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
A + + +PD+ Y +I GL R EA+++FREM + GC Y +
Sbjct: 397 AARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTIT 456
Query: 357 QGHL 360
+G L
Sbjct: 457 RGFL 460
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 146/339 (43%), Gaps = 66/339 (19%)
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKP 175
T A +R L MV C+ ++ N ++ +LC+ + V EA L ++ ++ I P
Sbjct: 149 TSAAIRLLGSMVQK-------NCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISP 201
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
+ Y LI C++ + + + N M D P DVV
Sbjct: 202 DIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMP--DVV-------------------- 239
Query: 236 QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADN-LTLSSIIYGLL 294
++ V+D +CK GK+++A+ ++++M +RG N ++ +++I G
Sbjct: 240 --------------SFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYC 285
Query: 295 ARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
R+ +A + E+ + PD Y LI GL + R ++A +F EM+ P +
Sbjct: 286 KIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLV 345
Query: 351 TYIMLLQGHLGK-----------RGRKGP--DPLVNFDTIFVGGLVKAGKSLDAAKYVER 397
TY +LL +L K + +G DP + + I + G+ +AG+ A
Sbjct: 346 TYRILLD-YLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSN 404
Query: 398 VMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREV 436
+ ++G++ + Y+ ++ + +E K RE+
Sbjct: 405 LSSKGLQPDVWTYSIMINGLCRRG---LLDEASKLFREM 440
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 122/298 (40%), Gaps = 58/298 (19%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N I++N +++ K + ID EM R+ L+ D T+ + L V L+ + F
Sbjct: 273 NVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALF 332
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-----LKLSEWIKPNEIAYGWLIKG 186
H M C +L ++ LC+ + + EA L+ L I+ N IA I G
Sbjct: 333 HEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIA----IDG 388
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
C G+L A +++ ++ +G +P +
Sbjct: 389 MCRAGELEAARDLFSNLSSKGLQPDV---------------------------------- 414
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE----- 301
TY I+I+ +C+RG + +A + EM + G TL+ IY + RG LR
Sbjct: 415 --WTYSIMINGLCRRGLLDEASKLFREMDENGC-----TLNGCIYNTITRGFLRNNETSR 467
Query: 302 AYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY--IMLLQ 357
A ++++E+ S + +++ Q +++++ C+ Y +M+LQ
Sbjct: 468 AIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILRDFCKQKSWIYENVMVLQ 525
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 67/161 (41%), Gaps = 29/161 (18%)
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSII--YGLLARGRLREAY----KVVEEIEKPDISLYH 318
S ++ +M GI + TL +I + L RG++ EA K++ E +PD+ Y
Sbjct: 78 STLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYG 137
Query: 319 GLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIF 378
LI GL ++ A ++ M+++ C+P + Y +TI
Sbjct: 138 TLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAY----------------------NTI- 174
Query: 379 VGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN 419
+ L K + +A ++ +G+ F YN +H N
Sbjct: 175 IDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCN 215
>gi|224137884|ref|XP_002326464.1| predicted protein [Populus trichocarpa]
gi|222833786|gb|EEE72263.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 97/417 (23%), Positives = 188/417 (45%), Gaps = 42/417 (10%)
Query: 47 NNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRR-L 105
NN L R FF + QP + HN +N+ + +N + + ++ + +
Sbjct: 73 NNLQLGLR----FFIWAGD-QPNYRHNLYIYNKACSLFKIKQNPQVILDLIETYKLEKCV 127
Query: 106 VNDKTFKIAL-------MTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKL 158
V TFK+ L + + LKKM F +I D N V+++LC++
Sbjct: 128 VCVDTFKVVLRLCKAGGLADEALMVLKKMPEF-NIRPD------TTAYNVVIRSLCEKGD 180
Query: 159 VVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDK 217
V AK L+ ++ + P+ I Y +IKG+CDVG L EA ++ +M+ G P++
Sbjct: 181 VDMAKKLMGEMGLIDLYPDMITYVSMIKGFCDVGRLEEAFALFPVMSVHGCYPNVVAYSA 240
Query: 218 MIETFFKINKDDEAMKVFQMMRVKRMDDL--GLSTYRIVIDWMCKRGKISQAYTMLEEMF 275
+++ + + A ++ M K+ + + TY VI C++G+ A ++LE M
Sbjct: 241 LLDGICRFGIVERAFELLAEME-KQGEGCCPNVITYTSVIQSFCEQGRTKDALSVLELME 299
Query: 276 KRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI-EKPDISL---YHGLIKGLLRLRRAR 331
RG + +T S+ I G+ G+L++ Y +E I +S+ Y L+ L+++++
Sbjct: 300 VRGCAPNRVTASAWINGICTNGQLQDVYNFIERIVAGGSVSIGDCYSSLVVCLIKIKKVE 359
Query: 332 EATQVFREMIKRGCEPTMHTYIMLLQGHLGKR------------GRKGPDPLVNFD--TI 377
EA + FR + G +P M+++ ++ + G ++ D +I
Sbjct: 360 EAEKTFRRALSSGMKPDSLACSMMIREICSEKRVLDGFCLYEEVEKTGCLSSIDIDIYSI 419
Query: 378 FVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLR 434
+ GL + G S +AA+ ++ + + + K + + N G + E+ +R
Sbjct: 420 LLAGLCQQGHSAEAARLARSMLEKRIPLRAPHVEKIVEHLKNFGGKELVAELVSMVR 476
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 89/401 (22%), Positives = 177/401 (44%), Gaps = 31/401 (7%)
Query: 64 QKAQPCFAHNSI-TFNRMVDIIGKSRNIDL---FWETLQEMG-RRRLVNDKTFKIALMTL 118
++A P A S+ T+ ++D ++R DL F+ L G R R + TF L L
Sbjct: 145 EEAGPRVAPLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTF---LKCL 201
Query: 119 AEVRELKKMVN-FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW---IK 174
+ + V+ H M+D GC + N V+K+LC EA ++ ++++
Sbjct: 202 CHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCS 261
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+ +++ +I G+ G++ +A + N M +G EP + + +++ K D+A V
Sbjct: 262 PDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELV 321
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
+ M K ++ GL+ I+ + C G ++ M +M +G+ +T +S + L
Sbjct: 322 LRQMVDKGVEPDGLTYTAIIHGYSCS-GHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLC 380
Query: 295 ARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
GR ++A ++ + + PD+ Y L+ G R + +F M +G H
Sbjct: 381 KHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCH 440
Query: 351 TYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVER 397
+ +L+ H KRG +G P V + + + G+ DA + +
Sbjct: 441 CFNILISAH-AKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQ 499
Query: 398 VMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
+++ G+E Y+ +H + +V +E+ ++ G+
Sbjct: 500 MISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGI 540
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/368 (20%), Positives = 159/368 (43%), Gaps = 37/368 (10%)
Query: 75 ITFNRMVDII---GKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFF 131
+TFN + + G+S++ + ++ + G + + ++ I L A M N F
Sbjct: 370 VTFNSFMSSLCKHGRSKDAEEIFQYMTTKGH--MPDLVSYSILLHGYATEGRFADMNNLF 427
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
H M D G + N ++ +R ++ EA + ++ + ++P+ + Y LI +C +
Sbjct: 428 HSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRM 487
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G L +A + ++ M G EP+ V +I F +A ++ M K + +
Sbjct: 488 GRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVF 547
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
+ +I +C G++ A+ + + G +T +S+I G G++ +A+ V++ +
Sbjct: 548 FSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMV 607
Query: 311 ----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK 366
+PD+ Y+ L+ G + + + +FREM+ + +PT TY
Sbjct: 608 SVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTY-------------- 653
Query: 367 GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYS----NEEG 422
+I + GL AG++ A K +++ G V Y L +E
Sbjct: 654 ---------SIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEA 704
Query: 423 VVMFEEVG 430
+ +F ++G
Sbjct: 705 ITLFHKLG 712
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 106/222 (47%), Gaps = 10/222 (4%)
Query: 146 LNKVVKTLCQRKLVVEAK---YLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNL 202
+ ++ +LC V++A L++ + + +P + + LI GYC VG + +A + +
Sbjct: 548 FSSIIHSLCNEGRVMDAHDVFNLVIHIGD--RPTIVTFNSLIDGYCLVGKMEKAFGVLDA 605
Query: 203 MTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRG 262
M G EP + + ++ + K K D+ + +F+ M K++ + TY IV+D + G
Sbjct: 606 MVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTV-TYSIVLDGLFHAG 664
Query: 263 KISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYH 318
+ S A M EM G D T ++ GL EA + ++ K DI++ +
Sbjct: 665 RTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILN 724
Query: 319 GLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL 360
+I L ++RR EA +F + G P + TY +++ L
Sbjct: 725 TVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLL 766
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 127/283 (44%), Gaps = 12/283 (4%)
Query: 73 NSITFNRMVDIIGKSRNID---LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
N FN ++ K +D L + +Q G R V T+ + + L +
Sbjct: 438 NCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDV--VTYSTLISAFCRMGRLADAME 495
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWI-KPNEIAYGWLIKGY 187
F M G E + + + ++ C +V+AK L+ ++ S+ I +PN + + +I
Sbjct: 496 KFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSL 555
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C+ G +++A ++NL+ G P+I + +I+ + + K ++A V M V +
Sbjct: 556 CNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAM-VSVGIEPD 614
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
+ TY ++ CK GKI + EM + ++ +T S ++ GL GR A K+
Sbjct: 615 VVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFH 674
Query: 308 EI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
E+ DI Y L+KGL R EA +F ++ C+
Sbjct: 675 EMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCK 717
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 107/272 (39%), Gaps = 45/272 (16%)
Query: 75 ITFNRMVDIIGKSRNID----LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNF 130
+T+N +V KS ID LF E L + + V T+ I L L
Sbjct: 616 VTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTV---TYSIVLDGLFHAGRTSAAKKM 672
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDV 190
FH M D G ++ ++K LC+ L EA L KL
Sbjct: 673 FHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAM------------------ 714
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
D F+ I +++ +I +K+ + +EA +F + + +ST
Sbjct: 715 --------------DCKFD--ITILNTVINALYKVRRREEANDLFAAISTSGLVP-NVST 757
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y ++I + K G + +A TM M K G + L+ II LL +G + +A + +++
Sbjct: 758 YGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVD 817
Query: 311 KPDISLYHGLIKGLLRLRRAREATQVFREMIK 342
ISL L+ L ++ RE IK
Sbjct: 818 GTIISLEASTTSLLMSLFSSKGK---HREQIK 846
>gi|449511130|ref|XP_004163870.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 847
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 93/414 (22%), Positives = 181/414 (43%), Gaps = 71/414 (17%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMV 128
+ H+S + M++I+ K++ L+ M RRR+ + + F +++ + L+ +
Sbjct: 242 YRHDSSVYLVMLEILSKTKLCQGAKRILRLMTRRRIQLCPEAFGFVMVSYSRAGRLRDAM 301
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-----WIKPNEIAYGWL 183
+M G E +L + N + L + +A L+ +E I PN + Y L
Sbjct: 302 KVLTLMQKAGVEPNLSICNTAIHILVMGNELKKA----LRFAERMVLIGIAPNVVTYNCL 357
Query: 184 IKGYCDVGDLIEASKIWNLMTDEGFEPSI--------------------DVVDKM----- 218
IKGYC+V + +A ++ + M +G P +++ KM
Sbjct: 358 IKGYCNVHQVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIRELIKKMQTDSK 417
Query: 219 -----------IETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQA 267
I+ K DEA+++ Q R + Y ++ CK GKI +A
Sbjct: 418 LLPDHVTYNSLIQMLSKHGHGDEALEILQEAEKLRF-KVDKVEYSAIVHAYCKEGKIQKA 476
Query: 268 YTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKG 323
++ EMF +G + D +T +S++ G G+L +A K+++++ KP+ Y + G
Sbjct: 477 KELVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFLNG 536
Query: 324 LLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR-------------KG--P 368
L R ++ EA ++ + P TY +++ G L + G+ KG P
Sbjct: 537 LCRNGKSLEARKMMNMSEEEWWTPNAITYSVVVHG-LRREGKLNEACDVVREMIGKGFFP 595
Query: 369 DPL-VNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEE 421
+P+ +N + V L + GK +A + ++ MN+G V ++ +H + ++
Sbjct: 596 NPVEIN---LLVHSLCRDGKPREANQLLKECMNKGCAVNVVNFTTVIHGFCQKD 646
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 140/299 (46%), Gaps = 8/299 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKT-FKIALMTLAEVRELKKMVNFF 131
+ +T+N ++ ++ K + D E LQE + R DK + + + +++K
Sbjct: 421 DHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKELV 480
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
M GC+ + V+ C+ + +AK ++ ++ KPN + Y + G C
Sbjct: 481 SEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFLNGLCRN 540
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G +EA K+ N+ +E + P+ ++ + K +EA V + M K +
Sbjct: 541 GKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEI 600
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI- 309
+++ +C+ GK +A +L+E +G + + +++I+G + L A +++++
Sbjct: 601 -NLLVHSLCRDGKPREANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMY 659
Query: 310 ---EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
+ PD Y LI L + R EAT++ +M+++G P+ TY ++ + ++GR
Sbjct: 660 LCNKHPDTVTYTALIDALAKTDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYC-RKGR 717
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 162/375 (43%), Gaps = 36/375 (9%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTL-------AEVR 122
A N +T+N ++ +D E + +M + DK +M L E+R
Sbjct: 347 IAPNVVTYNCLIKGYCNVHQVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIR 406
Query: 123 EL-KKMVNFFHIMNDCGCEYSL-EMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAY 180
EL KKM ++ D SL +ML+K +++ EA+ L K+ +++ Y
Sbjct: 407 ELIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKV------DKVEY 460
Query: 181 GWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
++ YC G + +A ++ + M +G +P + +++ F +I K D+A K+ Q M
Sbjct: 461 SAIVHAYCKEGKIQKAKELVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQM-Y 519
Query: 241 KRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
K TY ++ +C+ GK +A M+ + + +T S +++GL G+L
Sbjct: 520 KHHCKPNAVTYTTFLNGLCRNGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLN 579
Query: 301 EAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
EA VV E+ P+ + L+ L R + REA Q+ +E + +GC + + ++
Sbjct: 580 EACDVVREMIGKGFFPNPVEINLLVHSLCRDGKPREANQLLKECMNKGCAVNVVNFTTVI 639
Query: 357 QGHLGKRG--------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRG 402
G K K PD + T + L K + +A + +++ +G
Sbjct: 640 HGFCQKDDLEAALSLLDDMYLCNKHPDTVTY--TALIDALAKTDRIEEATELTMKMLRQG 697
Query: 403 VEVPRFDYNKFLHYY 417
+ Y +H Y
Sbjct: 698 LVPSPVTYRSVIHQY 712
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 120/282 (42%), Gaps = 37/282 (13%)
Query: 196 ASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVI 255
A ++W D S+ +V M+E K A ++ ++M +R+ L + V+
Sbjct: 236 ADRLWRYRHDS----SVYLV--MLEILSKTKLCQGAKRILRLMTRRRIQ-LCPEAFGFVM 288
Query: 256 DWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----K 311
+ G++ A +L M K G+E + ++ I+ L+ L++A + E +
Sbjct: 289 VSYSRAGRLRDAMKVLTLMQKAGVEPNLSICNTAIHILVMGNELKKALRFAERMVLIGIA 348
Query: 312 PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKG---- 367
P++ Y+ LIKG + + +A ++ +M +GC P +Y ++ G L + R
Sbjct: 349 PNVVTYNCLIKGYCNVHQVDQAMELIDQMPSKGCSPDKVSYYTVM-GLLCRDKRLNEIRE 407
Query: 368 ------------PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
PD V ++++ + L K G +A + ++ +V + +Y+ +H
Sbjct: 408 LIKKMQTDSKLLPDH-VTYNSL-IQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVH 465
Query: 416 YYSNEEGVVMFEEVGKKLREVGL-------ADLADIFQRYGK 450
Y E + +E+ ++ G + D F R GK
Sbjct: 466 AYCKEGKIQKAKELVSEMFSKGCDPDVVTYTSVLDGFCRIGK 507
>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
Length = 800
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 116/222 (52%), Gaps = 24/222 (10%)
Query: 139 CEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASK 198
C+ +L+MLN V + ++P+ AY LI G+C G++ A +
Sbjct: 577 CDLALKMLNDV-------------------RCKGLRPDIAAYNSLIYGFCQEGNMSHALQ 617
Query: 199 IWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWM 258
+ LM +G P+I V + I + + +EA++ ++ M +K DL +TY +ID
Sbjct: 618 VLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKM-IKEGIDLDTATYTTLIDGF 676
Query: 259 CKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDI 314
K G ++ A + EM +G D++T +++ +GL G + +A K+++E+ +P++
Sbjct: 677 SKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNV 736
Query: 315 SLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
+Y+ LI G LR + +EA ++ EM++R P TY +L+
Sbjct: 737 LMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV 778
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 176/440 (40%), Gaps = 46/440 (10%)
Query: 8 LVRVCTILYQQQYSPES--------RLHSSLSSCN-FNLTHEFFLQICNNFPLSWRPVYL 58
L+R CT ++ PE R H L S N FN+ + L N L V L
Sbjct: 323 LIRGCT----EEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLL----NDKLWKDAVSL 374
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDL---FWETLQEMGRRRLVNDKTFKIAL 115
F + P ++ T+N ++ + + R I WE + E G + + T+ L
Sbjct: 375 FKEMADSGIP----DAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYI--VTYHSLL 428
Query: 116 MTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIK 174
+ + + V + M G ++ ++K + +A L+ ++ + +
Sbjct: 429 LCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVS 488
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
N+ Y LI G C VG + E ++ EGF P+ + +I F K A V
Sbjct: 489 CNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAV 548
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
+Q M K + + TY ID CK A ML ++ +G+ D +S+IYG
Sbjct: 549 YQQMCAKGIPP-NIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFC 607
Query: 295 ARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
G + A +V+ + K P+IS+Y+ I G L+ EA + + +MIK G +
Sbjct: 608 QEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTA 667
Query: 351 TYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVER 397
TY L+ G K G KG P T GL + G DA K ++
Sbjct: 668 TYTTLIDG-FSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDE 726
Query: 398 VMNRGVEVPRFDYNKFLHYY 417
+ + YN ++ Y
Sbjct: 727 MNRLDIRPNVLMYNMLINGY 746
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 117/269 (43%), Gaps = 26/269 (9%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
L + + P ++ Y LI+G + G +A ++ M D G PS + + +I+
Sbjct: 309 LRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLW 368
Query: 229 DEAMKVFQMMRVKRMDDLGLS---TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
+A+ +F K M D G+ TY I+I W+C+R KI +A + E+M + G++ +T
Sbjct: 369 KDAVSLF-----KEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVT 423
Query: 286 LSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMI 341
S++ G + EA K+ E+ P++ Y L+KG + +A + EM
Sbjct: 424 YHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMK 483
Query: 342 KRGCEPTMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKS 388
+ G +TY L+ G L GR +G P + G +KAG
Sbjct: 484 QNGVSCNDYTYNTLING-LCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMM 542
Query: 389 LDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
A +++ +G+ Y F+ Y
Sbjct: 543 GSAFAVYQQMCAKGIPPNIVTYTSFIDGY 571
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 104/239 (43%), Gaps = 18/239 (7%)
Query: 216 DKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMF 275
D ++ FK D+A+++F M ++ + I +CK ++A +L +M
Sbjct: 181 DVVMRACFKEGMYDDAVRLFDEMPASEIEP-DQRVCSVAIASLCKLRDANRALLVLRKMQ 239
Query: 276 KRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAR 331
G + T +S++ L+ GR+ EA + +E+ +K + L L+ G R R
Sbjct: 240 DAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVR 299
Query: 332 EATQVFREMIKRGCEPTMHTYIMLLQG-----------HLGKRGRK-GPDPLVNFDTIFV 379
+A +F E ++ G PT TY +L++G L ++ R G P N + +
Sbjct: 300 KALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVI 359
Query: 380 GGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
GL+ DA + + + G+ F YN +H+ + + +K+ E G+
Sbjct: 360 KGLLNDKLWKDAVSLFKEMADSGIP-DAFTYNILIHWLCQRRKIREALNLWEKMNETGV 417
>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 119/232 (51%), Gaps = 14/232 (6%)
Query: 138 GCEYSLEMLNKVVKTLC-QRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEA 196
GC + N +++ C Q K+ K L +S+ +KP+ +Y I GYC V + EA
Sbjct: 140 GCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEA 199
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYR 252
++++ M+ G P+ + +I+ + + +A +F ++M GLS Y
Sbjct: 200 MELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLF-----RKMCACGLSPDILAYS 254
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE----E 308
++D CK+G + + + +EM +R ++ D + + II G+ ++++A +V+ E
Sbjct: 255 TLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVE 314
Query: 309 IEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL 360
KPD+ Y L+ GL R EA ++FR+M + GC P +Y +LLQG L
Sbjct: 315 GLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCL 366
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 133/345 (38%), Gaps = 57/345 (16%)
Query: 57 YLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALM 116
Y F + + + F + + F ++D + + +L L+EMG V D +LM
Sbjct: 93 YGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNSLM 152
Query: 117 -TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIK 174
++ K+ FH+M G + + + + C+ + + EA L ++S +
Sbjct: 153 RGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVV 212
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
PN + Y LIK C +A ++ M G P I +++ F K DE + +
Sbjct: 213 PNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVL 272
Query: 235 FQ--------------------MMRVKRMDDL----------GLS----TYRIVIDWMCK 260
FQ M R +++ D GL TY ++D +C+
Sbjct: 273 FQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCR 332
Query: 261 RGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR--EAYKVVEEI-EKPDISLY 317
G I +A + +M E D S Y +L +G L+ + VV+ I E D Y
Sbjct: 333 EGSIIEALRLFRKM-----EEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMADRGFY 387
Query: 318 HGLIKGLLRLRRAREATQVF-REMIKRGCEPTMHTYIMLLQGHLG 361
A T+ F ++ + P + + L +GH G
Sbjct: 388 ------------ADAVTRTFLKDFLPGNDSPAIKQLLGLFEGHQG 420
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 100/242 (41%), Gaps = 46/242 (19%)
Query: 185 KGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD 244
KGY G+L +A +N M D +P I ++++ + ++ K + + +F+ M + +
Sbjct: 15 KGY--FGNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIK 72
Query: 245 DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK 304
+ T I+I+ C + +++ + KRG
Sbjct: 73 -YNVCTLSILINCFCFLHHVDYGFSVFGKTLKRGF------------------------- 106
Query: 305 VVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL--GK 362
KPD+ ++ LI G+ R+ + A + +EM GC P + T L++G+ GK
Sbjct: 107 ------KPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRGYCSQGK 160
Query: 363 RGR----------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNK 412
+ KG P V +IF+ G K K +A + + + +RGV YN
Sbjct: 161 IDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNT 220
Query: 413 FL 414
+
Sbjct: 221 LI 222
>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g12100, mitochondrial; Flags: Precursor
gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 816
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 124/250 (49%), Gaps = 39/250 (15%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N ++ C++ +V A+ I + + +KP+ +AY LI+ +C++G++ A K N M
Sbjct: 393 NTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKL 452
Query: 206 EGFEPSIDVVDKMIETF---------FKINKDDE--------------------AMKVFQ 236
+G PS++ + +I + F I K+ E K+ +
Sbjct: 453 KGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLE 512
Query: 237 MMRVKR-MDDLGLST----YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
VKR M+D G+S Y ++ID C +GKI A+ +EM K+GIE + +T +++I
Sbjct: 513 AQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLID 572
Query: 292 GLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
GL G+L EA ++ EI KPD+ Y+ LI G + ++ EM + G +P
Sbjct: 573 GLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKP 632
Query: 348 TMHTYIMLLQ 357
T+ TY +L+
Sbjct: 633 TLKTYHLLIS 642
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 154/358 (43%), Gaps = 48/358 (13%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
ITFN ++ + K+ ++ L+EM V D TF I + + + + +
Sbjct: 285 ITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYET 344
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGD 192
D G + + + ++ LC+ + +A+ ++ + +++ + PNE+ Y +I GYC GD
Sbjct: 345 AVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGD 404
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
L+ A M +G +P + +I F ++ + + A K M++K + + TY
Sbjct: 405 LVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSP-SVETYN 463
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKP 312
I+I ++ + + + +L+EM DN T+ P
Sbjct: 464 ILIGGYGRKYEFDKCFDILKEM------EDNGTM-------------------------P 492
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG-------- 364
++ Y LI L + + EA V R+M RG P + Y ML+ G K
Sbjct: 493 NVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFS 552
Query: 365 ----RKGPD-PLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
+KG + LV ++T+ + GL GK +A + + +G++ F YN + Y
Sbjct: 553 KEMLKKGIELNLVTYNTL-IDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGY 609
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 128/297 (43%), Gaps = 53/297 (17%)
Query: 114 ALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEW 172
A+ ++ ++ K + F+ M S+ + N ++ LC+ K + +A+ L + L+
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
+ P+ I Y LI GYC G+ ++ K+ M + EPS+ + +++ FK ++A
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAE 304
Query: 233 KVFQMMRVKRMDDLGLS---------------------------------------TYRI 253
V +K M DLG T I
Sbjct: 305 NV-----LKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSI 359
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE--- 310
+++ +CK GKI +A +L +G+ + + +++I G +G L A +E +E
Sbjct: 360 LLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQG 419
Query: 311 -KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK 366
KPD Y+ LI+ L A + +M +G P++ TY +L+ G+ GRK
Sbjct: 420 MKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGY----GRK 472
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 149/327 (45%), Gaps = 24/327 (7%)
Query: 105 LVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLE----MLNKVVKTLCQRKLVV 160
L +D ++ + + L E + + + + F + + G S + +L+ +VKT ++ V
Sbjct: 106 LKHDFSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKT---KQFRV 162
Query: 161 EAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIE 220
+ L +P++ YG I+ + D+ + +++N M + PS+ + + +I+
Sbjct: 163 TINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLID 222
Query: 221 TFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIE 280
K + ++A ++F M +R+ L TY +ID CK G +++ + E M IE
Sbjct: 223 GLCKGKRMNDAEQLFDEMLARRLLP-SLITYNTLIDGYCKAGNPEKSFKVRERMKADHIE 281
Query: 281 ADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQV 336
+T ++++ GL G + +A V++E++ PD + L G +A A V
Sbjct: 282 PSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGV 341
Query: 337 FREMIKRGCEPTMHTYIMLL-----QGHLGKR----GRKGPDPLVNFDTIF---VGGLVK 384
+ + G + +T +LL +G + K GR+ LV + I+ + G +
Sbjct: 342 YETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCR 401
Query: 385 AGKSLDAAKYVERVMNRGVEVPRFDYN 411
G + A +E + +G++ YN
Sbjct: 402 KGDLVGARMKIEAMEKQGMKPDHLAYN 428
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 101/212 (47%), Gaps = 10/212 (4%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLIEA 196
G E +L N ++ L + EA+ L+L++S + +KP+ Y LI GY G++
Sbjct: 559 GIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRC 618
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVID 256
++ M G +P++ +I K + ++F M +K L Y V+
Sbjct: 619 IALYEEMKRSGIKPTLKTYHLLISLCTK-EGIELTERLFGEMSLKP----DLLVYNGVLH 673
Query: 257 WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KP 312
G + +A+ + ++M ++ I D T +S+I G L G+L E +++E+ +P
Sbjct: 674 CYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEP 733
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+ Y+ ++KG ++ A +REM ++G
Sbjct: 734 EADTYNIIVKGHCEVKDYMSAYVWYREMQEKG 765
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 130/290 (44%), Gaps = 11/290 (3%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIM 134
T+N ++ G+ D ++ L+EM + N ++ + L + +L + M
Sbjct: 461 TYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDM 520
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDVGDL 193
D G + + N ++ C + + +A ++ L + I+ N + Y LI G G L
Sbjct: 521 EDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKL 580
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
EA + ++ +G +P + + +I + + +++ M+ + L TY +
Sbjct: 581 SEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPT-LKTYHL 639
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE-IEKP 312
+I +C + I + EM ++ D L + +++ G + +A+ + ++ IEK
Sbjct: 640 LIS-LCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKS 695
Query: 313 ---DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
D + Y+ LI G L++ + E + EM R EP TY ++++GH
Sbjct: 696 IGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGH 745
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 14/123 (11%)
Query: 312 PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK--------- 362
P + +Y+ LI GL + +R +A Q+F EM+ R P++ TY L+ G+
Sbjct: 212 PSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKV 271
Query: 363 RGRKGPD----PLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYS 418
R R D L+ F+T+ + GL KAG DA ++ + + G F ++ YS
Sbjct: 272 RERMKADHIEPSLITFNTL-LKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYS 330
Query: 419 NEE 421
+ E
Sbjct: 331 SNE 333
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 105/238 (44%), Gaps = 5/238 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N +T+N ++D + + + + L E+ R+ L D T+ + +++ + +
Sbjct: 563 NLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALY 622
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVG 191
M G + +L+ + ++ +LC ++ + + L ++S +KP+ + Y ++ Y G
Sbjct: 623 EEMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEMS--LKPDLLVYNGVLHCYAVHG 679
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTY 251
D+ +A + M ++ + +I K+ K E + M + M+ TY
Sbjct: 680 DMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEA-DTY 738
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
I++ C+ AY EM ++G D + ++ GL R +EA V+ E+
Sbjct: 739 NIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 162/363 (44%), Gaps = 36/363 (9%)
Query: 73 NSITFNRMV-DIIGKSRN---IDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMV 128
++I++N ++ + G SR+ +D+ +E GR + +F + + E+ K
Sbjct: 194 DAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCS-PDVVSFNTVIHGFFKQGEVSKAC 252
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGY 187
N F+ M G + N +V LC+ + + +A++++ ++ + ++P+ + Y +I GY
Sbjct: 253 NLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGY 312
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK-RMDDL 246
G E++K++ MT +G P + + K + +A ++FQ M K M D
Sbjct: 313 SCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPD- 371
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
+ +Y I++ G+ + + M +GI ++ ++ +I RG + EA V
Sbjct: 372 -IVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVF 430
Query: 307 EEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
E++ +P++ Y LI R+ R +A + F +MI G EP Y L+ G
Sbjct: 431 TEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGF--- 487
Query: 363 RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEG 422
G LVK A +++ +M++G+ P + + + EG
Sbjct: 488 --------------CMHGDLVK------AKEFISEMMSKGLHRPNIVFFSSIIHSLCIEG 527
Query: 423 VVM 425
VM
Sbjct: 528 RVM 530
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 148/330 (44%), Gaps = 47/330 (14%)
Query: 73 NSITFNRMVDII---GKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
+++TF+ + + G+S++ + ++ + G + + ++ I L A M N
Sbjct: 336 DTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGH--MPDIVSYSILLHGYATEGRFADMNN 393
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYC 188
FH M D G + +N ++ +R ++ EA + ++ + ++PN + Y LI +C
Sbjct: 394 LFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFC 453
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF--QMM-------- 238
+G L +A + ++ M G EP+ V +I F ++ D K F +MM
Sbjct: 454 RMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFC-MHGDLVKAKEFISEMMSKGLHRPN 512
Query: 239 ---------------RVKRMDDL-----------GLSTYRIVIDWMCKRGKISQAYTMLE 272
RV D+ + T+ +ID C GK+ +A+ +L+
Sbjct: 513 IVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLD 572
Query: 273 EMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLR 328
M GIE D +T ++++ G G++ + + E+ KP Y+ ++ GLLR
Sbjct: 573 AMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAG 632
Query: 329 RAREATQVFREMIKRGCEPTMHTYIMLLQG 358
R A ++F EMI G + TY +LL+G
Sbjct: 633 RTSAAKKMFHEMIDSGTAVDIDTYKILLKG 662
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/388 (21%), Positives = 165/388 (42%), Gaps = 30/388 (7%)
Query: 76 TFNRMVDIIGKSRNIDL---FWETLQEMG-RRRLVNDKTFKIALMTLAEVRELKKMVN-F 130
T+ ++D ++R DL F L G + + TF L L + + V+
Sbjct: 126 TYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTF---LKCLCHAKRTDEAVDVL 182
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW---IKPNEIAYGWLIKGY 187
H M++ C N V+K+LC EA ++ ++++ P+ +++ +I G+
Sbjct: 183 LHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGF 242
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
G++ +A ++N M +G P + + +++ K D+A V + M K ++ G
Sbjct: 243 FKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDG 302
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
++ I+ + C G ++ M +M +G+ D +T SS + L GR ++A ++ +
Sbjct: 303 VTYNAIIHGYSCS-GHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQ 361
Query: 308 EIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
+ PDI Y L+ G R + +F M +G H +L+ H KR
Sbjct: 362 YMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAH-AKR 420
Query: 364 GR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY 410
G +G P V + + + G+ DA + ++++ G+E Y
Sbjct: 421 GMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVY 480
Query: 411 NKFLHYYSNEEGVVMFEEVGKKLREVGL 438
+ +H + +V +E ++ GL
Sbjct: 481 HSLIHGFCMHGDLVKAKEFISEMMSKGL 508
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 136/291 (46%), Gaps = 20/291 (6%)
Query: 146 LNKVVKTLCQRKLVVEAK---YLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNL 202
+ ++ +LC V++A+ L++ + + +P + + LI GYC VG + +A + +
Sbjct: 516 FSSIIHSLCIEGRVMDAQDVFNLVIHIGD--RPTIVTFNSLIDGYCLVGKMEKAFGVLDA 573
Query: 203 MTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRG 262
M G EP + + ++ + K K D+ + +F+ M K++ + TY IV+D + + G
Sbjct: 574 MVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTV-TYNIVLDGLLRAG 632
Query: 263 KISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYH 318
+ S A M EM G D T ++ GL EA + ++ K DI++ +
Sbjct: 633 RTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILN 692
Query: 319 GLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIF 378
+I L ++RR EA +F + G P + TY ++++ L + + D + F ++
Sbjct: 693 TMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTM--FSSME 750
Query: 379 VGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEV 429
G + + L+ + ++ +G D K +Y S +G ++ E
Sbjct: 751 KSGCAPSSRLLN--DIIRMLLQKG------DIVKAGYYMSKVDGTIISLEA 793
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 104/244 (42%), Gaps = 31/244 (12%)
Query: 242 RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
R+ L + TY I++D C+ + + + + G++ + ++ + L R E
Sbjct: 118 RVAPLTVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDE 177
Query: 302 AYKVV-----EEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRG--CEPTMHTYIM 354
A V+ E PD Y+ +IK L R++EA + + M K G C P + ++
Sbjct: 178 AVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNT 237
Query: 355 LLQGHLGKRG-------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVM-N 400
++ G K+G +KG P V V L KA +++D A++V R M +
Sbjct: 238 VIHGFF-KQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKA-RAMDKAEFVLRQMVD 295
Query: 401 RGVEVPRFDYNKFLHYYSN----EEGVVMFEEVGKKLREVGLADLADIFQRYGKKMATRE 456
+GVE YN +H YS +E MF +K+ GL F + +
Sbjct: 296 KGVEPDGVTYNAIIHGYSCSGHWKESAKMF----RKMTSKGLIPDTVTFSSFMSSLCKHG 351
Query: 457 RRRN 460
R ++
Sbjct: 352 RSKD 355
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 89/203 (43%), Gaps = 9/203 (4%)
Query: 64 QKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALMTLAEVR 122
+K +P ++T+N ++D + ++ + EM V+ T+KI L L
Sbjct: 612 KKVKP----TTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRND 667
Query: 123 ELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYG 181
+ + FH + C++ + +LN ++ L + + EA L +S + PN YG
Sbjct: 668 LTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYG 727
Query: 182 WLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK 241
+I+ G + EA +++ M G PS +++ +I + K D + M +V
Sbjct: 728 VMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQ--KGDIVKAGYYMSKVD 785
Query: 242 -RMDDLGLSTYRIVIDWMCKRGK 263
+ L ST +++ +GK
Sbjct: 786 GTIISLEASTTSLLMSLFSSKGK 808
>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
Length = 754
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 165/386 (42%), Gaps = 20/386 (5%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALMTLAEVRELKKMVNFF 131
N +T++ +++ + K++ +D L++M G N+ T+ + + K+ V F
Sbjct: 187 NVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVF 246
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDV 190
M+ + N + LC+ + EA+ + + + KP+ I+YG L+ GY
Sbjct: 247 KEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATA 306
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G + ++N+M EG P V + +I + ++ D+++ +F+ M K+ + + T
Sbjct: 307 GCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDM-TKQGVNPDIIT 365
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE-- 308
+ VI C+ G++ A M G+ D S +I G R L +A +++ +
Sbjct: 366 FSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDML 425
Query: 309 ---IEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------ 359
I P I + +I L + R E V +I G P + T+ L+ G+
Sbjct: 426 SKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNM 485
Query: 360 ------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
L G +P + V G K G+ DA ++++ V + YN
Sbjct: 486 KEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNII 545
Query: 414 LHYYSNEEGVVMFEEVGKKLREVGLA 439
LH ++ +E+ ++ E G+A
Sbjct: 546 LHGLFQARRTIVAKEMFHEMIESGMA 571
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 113/219 (51%), Gaps = 6/219 (2%)
Query: 143 LEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWN 201
++ ++ LC+ V E K ++ L + +PN I + L+ GYC VG++ EA + +
Sbjct: 434 IKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLD 493
Query: 202 LMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKR 261
M G EP I + +++ + K + D+A+ +F+ M KR+ +S Y I++ + +
Sbjct: 494 SMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVS-YNIILHGLFQA 552
Query: 262 GKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLY 317
+ A M EM + G+ T ++++ GL EA ++E++ K DI +
Sbjct: 553 RRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTF 612
Query: 318 HGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
+ +I+ + ++ R +EA ++F + G PT+ TY +++
Sbjct: 613 NIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMI 651
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 130/348 (37%), Gaps = 65/348 (18%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N ++ + V +A L K+ E I PN + Y LI G C ++ +A ++ M
Sbjct: 157 NALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVG 216
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM-DDLGLSTYRIVIDWMCKRGKI 264
G P+ + +I + E+++VF+ M + D+G + +CK G+I
Sbjct: 217 AGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVG--NCNSFMTALCKHGRI 274
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG-------------------------RL 299
+A + + M +G + D ++ ++++G G L
Sbjct: 275 KEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTL 334
Query: 300 REAYKVVEEIEK--------------PDISLYHGLIKGLLRLRRAREATQVFREMIKRGC 345
AY + ++K PDI + +I RL R +A + F MI G
Sbjct: 335 INAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGV 394
Query: 346 EPTMHTYIMLLQGHLGKRG------------RKG-PDPLVNFDTIFVGGLVKAGKSLDAA 392
P Y L+QG +R KG P P + F T + L K G+ +
Sbjct: 395 PPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGK 454
Query: 393 KYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLAD 440
V+ +++ G +N + Y VG VGL D
Sbjct: 455 DVVDLIIHTGQRPNLITFNSLVDGYC---------LVGNMKEAVGLLD 493
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 104/235 (44%), Gaps = 3/235 (1%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIM 134
T+N +VD K ID ++M +R+ + ++ I L L + R FH M
Sbjct: 506 TYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEM 565
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDL 193
+ G S+ V+ LC+ EA L+ KL S +K + + + +I+ VG
Sbjct: 566 IESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRR 625
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
EA +++ ++ G P+I MI K ++A +F M K
Sbjct: 626 QEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSME-KSSCTPDSRILNE 684
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
+I + +G++++A L ++ K+GI + T S +IY G+ RE K++ E
Sbjct: 685 IIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPE 739
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 77/186 (41%), Gaps = 16/186 (8%)
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA----YKV 305
TY I+I+ + + + + + G+ D + +++I G G + +A YK+
Sbjct: 120 TYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKM 179
Query: 306 VEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------ 359
E+ P++ Y LI GL + + +A +V R+M+ G P TY L+ G+
Sbjct: 180 EEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMW 239
Query: 360 ------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
+ P V F+ L K G+ +A + ++ +G + Y
Sbjct: 240 KESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGAL 299
Query: 414 LHYYSN 419
LH Y+
Sbjct: 300 LHGYAT 305
>gi|297797043|ref|XP_002866406.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312241|gb|EFH42665.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 522
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 159/355 (44%), Gaps = 23/355 (6%)
Query: 21 SPESRLHSSLSSCNFNLTH-----EFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSI 75
+P++ H+ N + +H + LQ N P + R F ++ + F+H
Sbjct: 87 NPDAESHAISQRFNLSFSHITPNPDLILQTLNLSPEAGRAALGFNEWLD-SNSNFSHTDE 145
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIM- 134
T + VD G+ ++ E + + + + KT + A+ L K++ FF M
Sbjct: 146 TVSFFVDYFGRRKDFKGMLEIISKY--KGIAGAKTLESAIDRLVRADRPKQVAAFFEKME 203
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLI 194
ND G + + L VVK LC+++ A+ ++ + I P+E LI G+C L
Sbjct: 204 NDYGLKRDRDSLTLVVKKLCEKRHASIAEKMVKNTANDIFPDENICDLLISGWCTAEKLD 263
Query: 195 EASKIWNLMTDEGFEPSIDVVDKMIETFFKI--NKD-----DEAMKVFQMMRVKRMDDLG 247
EA+++ M+ GFE + +++ K+ KD E KV M + +
Sbjct: 264 EATRLAGEMSRGGFEIGTKAYNMILDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPR-N 322
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
T+ ++I+ +CK + +A T+ M + G + D T +I L R+ E ++++
Sbjct: 323 TETFNVLINNLCKIRRTEEAMTLFARMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMID 382
Query: 308 EIEKP------DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
+++ + Y+G +K L + R A VF+ M GC+P + TY +L+
Sbjct: 383 KMKSAGYGEFLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLM 437
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 68/145 (46%), Gaps = 4/145 (2%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEA 196
G + E N ++ LC+ + EA L ++ EW +P+ Y LI+ + E
Sbjct: 318 GVPRNTETFNVLINNLCKIRRTEEAMTLFARMGEWGCQPDAETYLVLIRSLYQAARIGEG 377
Query: 197 SKIWNLMTDEGFEPSIDVVD--KMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIV 254
++ + M G+ ++ + ++ I + + AM VF+ M+ G+ TY ++
Sbjct: 378 DEMIDKMKSAGYGEFLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKP-GIKTYDLL 436
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGI 279
+ MC ++++A + +E K+GI
Sbjct: 437 MGKMCANNQLTRANGLYKEAAKKGI 461
>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Vitis vinifera]
Length = 644
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 154/346 (44%), Gaps = 26/346 (7%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
N +F + + + ++ + + + F M CE + ++ LC+ + EA L+
Sbjct: 171 NVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLL 230
Query: 167 LKLS-EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI 225
++ E P+ + + LI G C GD++ +K+ + M +G P+ + +I
Sbjct: 231 DEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLK 290
Query: 226 NKDDEAMKVFQMMRVKRM--DDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADN 283
K D+A+ + M + +D+ TY +I+ + K+G+ +L + +RG A+
Sbjct: 291 GKLDKAVSLLDRMVASKCVPNDV---TYGTLINGLVKQGRSVDGVHLLSSLEERGHHANE 347
Query: 284 LTLSSIIYGLLARGRLREAY----KVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFRE 339
S++I GL + EA K+VE+ +P+I +Y LI GL R + EA ++ E
Sbjct: 348 YAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCE 407
Query: 340 MIKRGCEPTMHTYIMLLQGHL------------GKRGRKGPDPLVNFDTIFVGGLVKAGK 387
M+ +GC P TY L++G + + P ++ + GL + GK
Sbjct: 408 MVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGK 467
Query: 388 SLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKL 433
+A ++ RG+ Y+ +H N V EVG KL
Sbjct: 468 LREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSV----EVGLKL 509
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/385 (20%), Positives = 177/385 (45%), Gaps = 34/385 (8%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGR-RRLVNDKTFKIALMTLAEVRELKKMVNFF-HI 133
TF +++ S + ++ M R RR+ +K F + + +K + F +
Sbjct: 66 TFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGRM 125
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-------IKPNEIAYGWLIKG 186
+++ C ++ N V+ + Q L A L+ E I PN +++ +IK
Sbjct: 126 VDEFQCRRTVRSFNSVLNVIIQEGLFHRA----LEFYECGVGGKTNISPNVLSFNLVIKA 181
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
C +G + A +++ M + EP + +++ K ++ DEA+ + M+++
Sbjct: 182 MCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPS 241
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
+ T+ ++I+ +CK+G + + +++ MF +G + +T ++II GL +G+L +A ++
Sbjct: 242 SV-TFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLL 300
Query: 307 EEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG---- 358
+ + P+ Y LI GL++ R+ + + + +RG + Y L+ G
Sbjct: 301 DRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKE 360
Query: 359 -----HLG---KRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY 410
+G K KG P + + + GL + GK +A + + ++N+G F Y
Sbjct: 361 EKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTY 420
Query: 411 NK----FLHYYSNEEGVVMFEEVGK 431
+ F ++++ + +++E+ K
Sbjct: 421 SSLIKGFFKTGNSQKAIRVWKEMAK 445
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 109/261 (41%), Gaps = 42/261 (16%)
Query: 73 NSITFNRMVD-IIGKSRNID--LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
N +T+ +++ ++ + R++D +L+E G N+ + + L + + ++ +
Sbjct: 311 NDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHH--ANEYAYSTLISGLFKEEKSEEAMG 368
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL------------SEWIK--- 174
+ M + GC+ ++ + + ++ LC+ + EAK ++ ++ S IK
Sbjct: 369 LWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFF 428
Query: 175 ---------------------PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSID 213
PNEI Y LI G C+ G L EA +W M G P +
Sbjct: 429 KTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVV 488
Query: 214 VVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL-GLSTYRIVIDWMCKRGKISQAYTMLE 272
MI + +K+F M + D + TY I++ +CK+ IS A +L
Sbjct: 489 AYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLN 548
Query: 273 EMFKRGIEADNLTLSSIIYGL 293
M RG D +T + + L
Sbjct: 549 SMLDRGCNPDLITCNIFLNAL 569
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 117/226 (51%), Gaps = 6/226 (2%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEA 196
GCE + + ++ +LC+ + EA L + + + + P+ +Y LI C G L A
Sbjct: 307 GCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLA 366
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVID 256
I + M G P I + ++ K ++A+++F +R +S+Y +I
Sbjct: 367 IGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPP-NVSSYNTMIS 425
Query: 257 WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KP 312
+ G S+A M+ M +G++ D +T +S+I L G + EA +++++E +P
Sbjct: 426 ALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRP 485
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+ Y+ ++ GL ++RR +A +F EMI++GC P TYI+L++G
Sbjct: 486 TVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEG 531
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 139/312 (44%), Gaps = 23/312 (7%)
Query: 145 MLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT 204
+ K++K K + +A ++ L +P+ AY +I G+C V + A+++ N M
Sbjct: 105 LCTKLIKGFFNFKNIEKASRVMEILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMK 164
Query: 205 DEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
GF P I + MI + K A+KV + + + TY I+I+ G I
Sbjct: 165 ARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVI-TYTILIEATIVEGGI 223
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGL 320
++A +LEEM RG+ D T ++II G+ G + A +++ + KPD+ Y+ L
Sbjct: 224 NEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNIL 283
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR--------------- 365
++ L + E ++ EM RGCEP TY +L+ L + GR
Sbjct: 284 LRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILIS-SLCRFGRIDEAISVLKVMIEKE 342
Query: 366 KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVM 425
PD ++D + + L K G+ A ++ +++ G +YN L
Sbjct: 343 LTPD-TYSYDPL-ISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQ 400
Query: 426 FEEVGKKLREVG 437
E+ KLR +G
Sbjct: 401 ALEIFNKLRGMG 412
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 108/246 (43%), Gaps = 20/246 (8%)
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
L+ C G E+ + ++G+ P + + K+I+ FF ++A +V +++
Sbjct: 74 LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHT 133
Query: 243 MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
D + Y VI CK +I A +L M RG D +T + +I L R +L A
Sbjct: 134 EPD--VFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLA 191
Query: 303 YKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
KV++++ P + Y LI+ + EA ++ EM+ RG P M+TY +++G
Sbjct: 192 LKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRG 251
Query: 359 HLGKRG-------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEV 405
+ K G KG P V I + + GK + K V + +RG E
Sbjct: 252 -MCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEP 310
Query: 406 PRFDYN 411
+ Y+
Sbjct: 311 NKVTYS 316
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 123/287 (42%), Gaps = 20/287 (6%)
Query: 147 NKVVKTLC-QRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N ++ +LC +RKL + K L L + P I Y LI+ G + EA K+ M
Sbjct: 176 NIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLA 235
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKIS 265
G P + + +I K + A ++ + K +S Y I++ +GK
Sbjct: 236 RGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVIS-YNILLRAFLNQGKWD 294
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE-EIEK---PDISLYHGLI 321
+ ++ EMF RG E + +T S +I L GR+ EA V++ IEK PD Y LI
Sbjct: 295 EGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLI 354
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL-----QGHLGK--------RGRKGP 368
L + R A + MI GC P + Y +L G+ + RG P
Sbjct: 355 SALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCP 414
Query: 369 DPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
+ +++T+ + L G A V ++++GV+ YN +
Sbjct: 415 PNVSSYNTM-ISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLIS 460
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 17/200 (8%)
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE--- 310
+++ CK GK +++ LE + +G D + + +I G + +A +V+E +E
Sbjct: 74 LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHT 133
Query: 311 KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPD- 369
+PD+ Y+ +I G ++ R ATQV M RG P + TY +++ G L R + G
Sbjct: 134 EPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMI-GSLCNRRKLGLAL 192
Query: 370 ------------PLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
P V TI + + G +A K +E ++ RG+ + YN +
Sbjct: 193 KVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 252
Query: 418 SNEEGVVMFEEVGKKLREVG 437
E V E+ L G
Sbjct: 253 CKEGMVERAAELITSLTSKG 272
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 96/244 (39%), Gaps = 3/244 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N +T++ ++ + + ID L+ M + L D ++ + L + L +
Sbjct: 311 NKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIM 370
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
M GC + N ++ LC+ +A + KL PN +Y +I
Sbjct: 371 DYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSC 430
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
GD A + M +G +P + +I + +EA+ + M +S
Sbjct: 431 GDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVIS- 489
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y IV+ +CK +I A M EM ++G + T +I G+ G EA ++ +
Sbjct: 490 YNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLF 549
Query: 311 KPDI 314
D+
Sbjct: 550 SRDV 553
>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
Length = 532
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 140/295 (47%), Gaps = 9/295 (3%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
N +T N ++D + K + +D LQ+M ++ N T+ + + + V
Sbjct: 155 NVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRIL 214
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
M+ G ++ N ++ LC+ EA+ + + KP+ YG L+ GY
Sbjct: 215 KEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATE 274
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLS 249
G+L+E + + +LM G + I + K + DEA F +M ++ M D +
Sbjct: 275 GNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPD--IV 332
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA----YKV 305
TY VID +CK G++ A + +M G+ + +T +++I+G G+ +A Y++
Sbjct: 333 TYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEM 392
Query: 306 VEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL 360
++ PD++++ +I L + + EA ++F M + G +P + +Y ++ G+
Sbjct: 393 MDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYF 447
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 143/322 (44%), Gaps = 20/322 (6%)
Query: 123 ELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYG 181
++ K F M D G ++ N V+ LC+ + + +A+ ++ ++ E I PN Y
Sbjct: 136 DVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYN 195
Query: 182 WLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK 241
LI GY G EA +I M+ +G P++ + +I+ K EA ++F M ++
Sbjct: 196 SLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSM-IQ 254
Query: 242 RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
+TY ++ G + + + + M + G+ +++ T S IY GRL E
Sbjct: 255 SGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDE 314
Query: 302 AYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
A ++++ PDI Y +I GL ++ R +A F +MI G P + T+ L+
Sbjct: 315 ASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIH 374
Query: 358 GH--LGKRGR----------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEV 405
G GK + +G P V T + L K GK +A K + + G +
Sbjct: 375 GFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKP 434
Query: 406 PRFDYNKFLHYY--SNEEGVVM 425
YN +H Y + E G VM
Sbjct: 435 NVVSYNTMIHGYFIAGEVGEVM 456
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 117/223 (52%), Gaps = 17/223 (7%)
Query: 149 VVKTLCQRKLVVEAKYLILK-LSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDE 206
+++TLC +K +A ++L+ + E P+ +Y L+KG C EA+++ ++M ++
Sbjct: 54 LLRTLCAKKRTSDAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAED 113
Query: 207 GFEPSIDVVD--KMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCK 260
G DVV +I FFK +A +F +M D G+ T VID +CK
Sbjct: 114 GDNCPPDVVSYSTVIHGFFKEGDVGKAYTLFC-----KMLDHGIPPNVVTCNSVIDGLCK 168
Query: 261 RGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISL 316
+ +A +L++M I + T +S+I+G L+ G+ EA ++++E+ ++P++
Sbjct: 169 VQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVT 228
Query: 317 YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
Y+ LI L + EA ++F MI+ G +P TY LL G+
Sbjct: 229 YNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGY 271
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 118/288 (40%), Gaps = 26/288 (9%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
+ P+ +G LI CD G L + G ++ T + +AM
Sbjct: 9 VAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAM 68
Query: 233 KVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRG--IEADNLTL 286
+ ++RM +LG + +Y ++ +C K +A ++ M + G D ++
Sbjct: 69 NIV----LRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSY 124
Query: 287 SSIIYGLLARGRLREAY----KVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIK 342
S++I+G G + +AY K+++ P++ + +I GL +++ +A V ++MI
Sbjct: 125 STVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMID 184
Query: 343 RGCEPTMHTYIMLLQGHLG------------KRGRKGPDPLVNFDTIFVGGLVKAGKSLD 390
P TY L+ G+L + R G P V + + L K+G +
Sbjct: 185 EHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAE 244
Query: 391 AAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
A + ++ G + Y LH Y+ E +V V + + G+
Sbjct: 245 AREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGM 292
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 101/239 (42%), Gaps = 14/239 (5%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
N TF I + + L + F M G + V+ LC+ + +A
Sbjct: 295 NHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRF 354
Query: 167 LKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI 225
++ + + PN I + LI G+ G +A +++ M D G P + + MI+ FK
Sbjct: 355 CQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKE 414
Query: 226 NKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
K EA K+F +M + + +Y +I G++ + +L++M G++ +T
Sbjct: 415 GKVTEAQKLFDLMP-RAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVT 473
Query: 286 LSSIIYGLLARGRLREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
++++ G+++ G KPD+ LI R + +FREM+ +
Sbjct: 474 FNTLLDGMVSMGL------------KPDVDTCKTLIDSCCEDGRIEDILTLFREMLGKA 520
>gi|356533316|ref|XP_003535211.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 918
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 142/294 (48%), Gaps = 7/294 (2%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHI 133
+ +N ++ N+D +++M + R +TF + A E+++ + F +
Sbjct: 520 VLYNNIITAFCGMSNMDRAICMVKQMQKERYRPTTRTFLPIIHGFARAGEMRRALEIFDM 579
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGD 192
M GC ++ N ++ L +++ + +A ++ +++ + PNE Y L++GY +GD
Sbjct: 580 MRRSGCIPTVHTYNALILGLVEKRKMAKAVAILDQMNVAGVGPNEHTYTTLMQGYASLGD 639
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
+A + ++++ +EG E + + ++++ K + A+ V + M K + Y
Sbjct: 640 TEKAFQYFSVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTF-VYN 698
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
I+ID +RG + +A ++++M K G+ D T +S + G +++A ++++E+E
Sbjct: 699 ILIDGWARRGDVWEAADLMQQMRKEGVLPDIHTYTSFVNACCKAGDMQKATEIIQEMEAF 758
Query: 311 --KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
KP++ Y LI G R +A F EM +P Y L+ L +
Sbjct: 759 GIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAELKPDKAAYHCLMTSLLSR 812
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 117/251 (46%), Gaps = 17/251 (6%)
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
Y ++ GY +G+ + +++ + + GF PS+ +I + KI K +A+++ +MM+
Sbjct: 417 YHTMMDGYTMIGNEEKCLIVFDRLKECGFSPSVISYGCLINLYTKIGKVSKALQISKMMK 476
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRL 299
+ + + TY ++I+ K + A+++ E+ K G++ D + ++II +
Sbjct: 477 MSGIKH-NMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMSNM 535
Query: 300 REAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
A +V++++K P + +I G R R A ++F M + GC PT+HTY L
Sbjct: 536 DRAICMVKQMQKERYRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNAL 595
Query: 356 LQGHLGKR------------GRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
+ G + KR G P + T + G G + A +Y + N G+
Sbjct: 596 ILGLVEKRKMAKAVAILDQMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFSVLRNEGL 655
Query: 404 EVPRFDYNKFL 414
E+ + Y L
Sbjct: 656 EIDVYTYEALL 666
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/401 (20%), Positives = 164/401 (40%), Gaps = 35/401 (8%)
Query: 42 FLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMG 101
F ++ P +W+ V F+ +K + MV + ++ +T + M
Sbjct: 248 FQKVLETQPENWQAVVTAFERIKKPA------RKEYGLMVKYYARRGDMHHARQTFESMQ 301
Query: 102 RRRL-VNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVV 160
R + + + + A R++++ ++ M + G E ++ + +V +
Sbjct: 302 ARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMKEEGIEMTIVTYSIIVGGFAKMGKAD 361
Query: 161 EAKYLILKLSEWIKP-NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMI 219
A + + E + N + YG +I +C ++ A + M +G + ID+ M+
Sbjct: 362 AADHWFKEAKEKLPSLNAVTYGSIIYAHCQTCNMDRAEALVREMEVQGIDAPIDIYHTMM 421
Query: 220 ETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMF 275
+ + I +++ + VF R+ + G S +Y +I+ K GK+S+A + + M
Sbjct: 422 DGYTMIGNEEKCLIVFD-----RLKECGFSPSVISYGCLINLYTKIGKVSKALQISKMMK 476
Query: 276 KRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAR 331
GI+ + T S +I G L A+ V E+ K PD+ LY+ +I +
Sbjct: 477 MSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMSNMD 536
Query: 332 EATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG-------------RKGPDPLVNFDTIF 378
A + ++M K PT T++ ++ G + G R G P V+
Sbjct: 537 RAICMVKQMQKERYRPTTRTFLPIIHG-FARAGEMRRALEIFDMMRRSGCIPTVHTYNAL 595
Query: 379 VGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN 419
+ GLV+ K A ++++ GV Y + Y++
Sbjct: 596 ILGLVEKRKMAKAVAILDQMNVAGVGPNEHTYTTLMQGYAS 636
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 83/198 (41%), Gaps = 2/198 (1%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
N+ T+ + A + + +K +F ++ + G E + ++K+ C+ + A +
Sbjct: 623 NEHTYTTLMQGYASLGDTEKAFQYFSVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVT 682
Query: 167 LKLSEWIKP-NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI 225
++S P N Y LI G+ GD+ EA+ + M EG P I + K
Sbjct: 683 KEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGVLPDIHTYTSFVNACCKA 742
Query: 226 NKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
+A ++ Q M + L TY +I+ + +A + EEM ++ D
Sbjct: 743 GDMQKATEIIQEMEAFGIKP-NLKTYTTLINGWARASMPEKALSCFEEMKLAELKPDKAA 801
Query: 286 LSSIIYGLLARGRLREAY 303
++ LL+R ++Y
Sbjct: 802 YHCLMTSLLSRATFAQSY 819
>gi|255581311|ref|XP_002531466.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528920|gb|EEF30916.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 518
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 93/426 (21%), Positives = 192/426 (45%), Gaps = 27/426 (6%)
Query: 15 LYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNS 74
LY + + + SL+S L ++ + L+ + L F Q + H+S
Sbjct: 34 LYTHLQNNPNNVEKSLNSIKPKLDTRCVTEVLHKCSLNNSQIGLRFFVWAGYQSNYRHSS 93
Query: 75 ITFNRMVDIIGKSRN----IDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNF 130
+++ + +N +DLF E + +VN KTFK+ L E +
Sbjct: 94 FLYSKACKLFNIKQNPQAVLDLFEFYRAE---KCVVNLKTFKVVLNLCKEGTLANEAFLV 150
Query: 131 FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCD 189
M + + + V++ C + + A+ L+ ++S + P+ + Y +IKG+CD
Sbjct: 151 LRKMQEFDIQADTKAYTIVIRLFCDKGDMDMAQKLMGEMSFNDLYPDMVTYVSIIKGFCD 210
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD-DLGL 248
+G L EA ++ M G P++ V +++ + + A+++ M + D + +
Sbjct: 211 IGRLEEACRLVKEMRAHGCVPNVVVYSTLVDGICRFGSVERALELLGGMEKEGGDCNPNV 270
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY VI +C++G+ A+ +L+ M G + +T+S+++ L G L EAYK+++
Sbjct: 271 LTYTSVIQGLCEKGRTMDAFAVLDRMEACGCAPNRVTVSTLLKRLCMDGHLEEAYKLIDR 330
Query: 309 I----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT-MHTYIML-------- 355
+ Y ++ L+R+++ EA ++FR + G +P + +M+
Sbjct: 331 VVAGGSVSSCDCYSPIVVCLIRIKKVEEAEKLFRRAVVSGVKPDGLACSLMIKELCFVNR 390
Query: 356 -LQGHL--GKRGRKGPDPLVNFDT--IFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY 410
L G+ + + G ++ DT + + GL + G SL+AAK ++ + + +
Sbjct: 391 VLDGYCLHDEIEKIGSLSTIDSDTYSVLLVGLCQQGYSLEAAKLARSLIEKRIHLKHPYV 450
Query: 411 NKFLHY 416
+K + Y
Sbjct: 451 DKVVEY 456
>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
Length = 796
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 122/227 (53%), Gaps = 18/227 (7%)
Query: 149 VVKTLCQRKLVVEAKYLILK-LSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD- 205
++K LC K V EA ++L+ +SE PN ++Y L+KG+CD EA ++ ++M D
Sbjct: 136 LLKGLCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADG 195
Query: 206 --EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMC 259
P++ + +I FF + D+A +F M D G+ TY IVID +C
Sbjct: 196 QVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFL-----DMTDQGIPPNVVTYTIVIDGLC 250
Query: 260 KRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDIS 315
K + +A + ++M +G+ + +T + +I+G L+ G+ +E ++++E+ +PD
Sbjct: 251 KAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCF 310
Query: 316 LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
Y L+ L + + EA ++F MI++G +P + Y ++L G+ K
Sbjct: 311 TYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATK 357
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 161/369 (43%), Gaps = 33/369 (8%)
Query: 58 LFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALM 116
LF T + P N +T+ ++D + K++ +D Q+M + + N T+ +
Sbjct: 226 LFLDMTDQGIP---PNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIH 282
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKP 175
+ + K++V M+ G E ++ LC++ EA+ L + + IKP
Sbjct: 283 GYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKP 342
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
+ YG ++ GY G L E +LM G P+ + + + F K EAM +F
Sbjct: 343 DVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIF 402
Query: 236 QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
MR + + + Y +ID +CK G++ A +M G+ + + +S++YGL
Sbjct: 403 NKMRQQGLSP-NVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCT 461
Query: 296 RGRLREA----YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
+ +A +++V + P++ ++ ++ L R +A ++ M + G P + +
Sbjct: 462 IDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIIS 521
Query: 352 YIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
Y L++GH GK+ +A+K ++ +++ G++ YN
Sbjct: 522 YNALIRGH-----------------------CLVGKTDEASKLLDIMLSVGLKPNECTYN 558
Query: 412 KFLHYYSNE 420
LH Y +
Sbjct: 559 TLLHGYCRD 567
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 130/284 (45%), Gaps = 14/284 (4%)
Query: 91 DLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVV 150
+LF+E + + +V T L T V + +++++ +M G + N ++
Sbjct: 470 ELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLID---LMERVGTRPDIISYNALI 526
Query: 151 KTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFE 209
+ C EA K L + LS +KPNE Y L+ GYC G + +A ++ M G
Sbjct: 527 RGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGIT 586
Query: 210 PSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYT 269
P + + ++ FK + EA +++ M + + TY I+++ + K + +A
Sbjct: 587 PVVVTYNTILHGLFKTRRFSEAKELYLNM-ITSGKQWSIYTYNIILNGLSKNNCVDEALK 645
Query: 270 MLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLL 325
M + + + ++ D +T + +I LL GR +A + I PD++ Y + + L+
Sbjct: 646 MFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLI 705
Query: 326 RLRRAREATQVFREMIKRGCEPT--MHTYI---MLLQGHLGKRG 364
E +F EM K GC P M ++ +LL+G + + G
Sbjct: 706 EEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRAG 749
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 147/352 (41%), Gaps = 23/352 (6%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDC---GCEYSLEMLNKVVKTLCQRKLVVEAK 163
N ++ L + ++ + H+M D C +L N V+ V +A
Sbjct: 165 NVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVINGFFTEGQVDKAY 224
Query: 164 YLILKLS-EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETF 222
L L ++ + I PN + Y +I G C + A ++ M D+G P+I +I +
Sbjct: 225 NLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGY 284
Query: 223 FKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEAD 282
I + E +++ + M ++ TY +++D++CK+GK ++A + + M ++GI+ D
Sbjct: 285 LSIGQWKEVVRMLKEMSAHGLEP-DCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPD 343
Query: 283 NLTLSSIIYGLLARGRLREAYKVVEEIEKPDISLYHGLIK----GLLRLRRAREATQVFR 338
I++G +G L E + ++ + IS H + + EA +F
Sbjct: 344 VSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFN 403
Query: 339 EMIKRGCEPTMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKA 385
+M ++G P + Y L+ L K GR +G P + T V GL
Sbjct: 404 KMRQQGLSPNVVNYATLIDA-LCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTI 462
Query: 386 GKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVG 437
K A + ++N+G+ +N + E V+ + + + VG
Sbjct: 463 DKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVG 514
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 95/221 (42%), Gaps = 24/221 (10%)
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRG-IEADNLTLSSIIYGLLARGRLREAYKVV-- 306
TY I++ C+ G++ + + K G D + ++ ++ GL R+ EA V+
Sbjct: 96 TYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEAMGVLLR 155
Query: 307 ---EEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIK---RGCEPTMHTYIMLLQGHL 360
E P++ Y+ L+KG RA EA ++ M R C P + +Y ++ G
Sbjct: 156 RMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVINGFF 215
Query: 361 --GKRGR----------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRF 408
G+ + +G P V TI + GL KA A ++++++GV
Sbjct: 216 TEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIV 275
Query: 409 DYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLADIFQRYG 449
Y +H Y + + ++EV + L+E+ L YG
Sbjct: 276 TYTCLIHGYLS---IGQWKEVVRMLKEMSAHGLEPDCFTYG 313
>gi|224114285|ref|XP_002316718.1| predicted protein [Populus trichocarpa]
gi|222859783|gb|EEE97330.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 92/426 (21%), Positives = 184/426 (43%), Gaps = 64/426 (15%)
Query: 56 VYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSR---NIDLFWETLQEMGRRRLVNDKTFK 112
V L F + Q + H+ I + M+D++ K++ + G +R D F
Sbjct: 65 VALDFFFWSDRQWRYRHDPIVYCVMLDVLSKTKLCQGARRVLRLMVRRGIQRTPQD--FC 122
Query: 113 IALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW 172
+++ + +L+ + +M G E +L + N + L ++ +A + ++
Sbjct: 123 CVMVSYSRAGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQLL 182
Query: 173 -IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPS-------------------- 211
I PN + Y LIKGYCD+ + +A ++ + M +G P
Sbjct: 183 GIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREV 242
Query: 212 IDVVDKM---------------IETFFKINKDDEAMKVFQMMRVK--RMDDLGLSTYRIV 254
+DV++KM I K DEA++ + + + ++D +G Y +
Sbjct: 243 MDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVG---YSAI 299
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE---- 310
+D CK G++ QA ++ EMF RG D +T ++II G G + +A K+++++
Sbjct: 300 VDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGC 359
Query: 311 KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR----- 365
KP+ Y +KGL + + EA ++ + ++ P TY +++ G + G+
Sbjct: 360 KPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHG-FRREGKLSDAC 418
Query: 366 --------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
KG P + + L + G+ +A K++E +N G V ++ +H +
Sbjct: 419 DVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRF 478
Query: 418 SNEEGV 423
++ +
Sbjct: 479 CQQDDI 484
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 87/422 (20%), Positives = 171/422 (40%), Gaps = 42/422 (9%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVNFF 131
N +T+N ++ ++ E + EM + DK +M L + R ++++++
Sbjct: 187 NVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVI 246
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDV 190
M D N ++ LC+ + EA ++L + +++ Y ++ YC
Sbjct: 247 EKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKE 306
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G + +A +I N M G P + +I F + + +A K+ Q M K +
Sbjct: 307 GRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQM-YKHGCKPNTVS 365
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y + +C++G S+A M++ ++ + +T S +++G G+L +A VV E+
Sbjct: 366 YTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMI 425
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR--- 363
P + L++ L R+ R EA + E + GC + ++ +
Sbjct: 426 GKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIE 485
Query: 364 -----------GRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNK 412
K PD V + TI + L K G+ +A + +++ +G++ Y
Sbjct: 486 AALSLLDDMYLSNKHPDA-VTYTTI-IDALGKKGRIEEATELTLKMLKKGIDPTPVTYRT 543
Query: 413 FLHYY-----------------SNEEGVVMFEEVGKKLREVGLADLADIFQRYGKKMATR 455
+H Y + +E F +V +KL G + AD + GK + T
Sbjct: 544 VIHRYGQIGRVEDLLNLLDKMLTRQECRTAFNQVIEKLCTFGNLEAAD--KLLGKVLRTA 601
Query: 456 ER 457
R
Sbjct: 602 SR 603
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 95/430 (22%), Positives = 177/430 (41%), Gaps = 81/430 (18%)
Query: 60 FQYTQKAQP-CFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMT 117
Q+ ++AQ F + + ++ +VD K +D E + EM R + D T+ +
Sbjct: 278 LQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIING 337
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE--WIKP 175
++ E+ + M GC+ + +K LCQ+ EA+ + +K SE W P
Sbjct: 338 FSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREM-MKASEEQWWTP 396
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
N I Y ++ G+ G L +A + M +GF P+ ++ ++++ +I + DEA K
Sbjct: 397 NAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFM 456
Query: 236 QM---------------------------MRVKRMDDLGLS-------TYRIVIDWMCKR 261
+ + +DD+ LS TY +ID + K+
Sbjct: 457 EECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKK 516
Query: 262 GKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISLYHGLI 321
G+I +A + +M K+GI+ +T ++I+ GR+ + L+
Sbjct: 517 GRIEEATELTLKMLKKGIDPTPVTYRTVIHRYGQIGRVED------------------LL 558
Query: 322 KGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH--LGKRGRKGPDPLVNFDTIFV 379
L ++ +E F ++I++ C T+ L LGK R N + +
Sbjct: 559 NLLDKMLTRQECRTAFNQVIEKLC-----TFGNLEAADKLLGKVLRTASRIDANTCHVLM 613
Query: 380 GGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLA 439
++ G L A K R+ +R + +P + E+V KKL + G +
Sbjct: 614 ESYLRKGIPLSAYKVACRMFSRSL-IPDLK---------------LCEKVCKKLMQEGKS 657
Query: 440 DLAD-IFQRY 448
+ AD +F R+
Sbjct: 658 EEADNLFLRF 667
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/278 (19%), Positives = 118/278 (42%), Gaps = 9/278 (3%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALMTLAEVRELKKMVNFF 131
N+IT++ ++ + + + ++EM G+ + L +L + + + F
Sbjct: 397 NAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFM 456
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIK-PNEIAYGWLIKGYCDV 190
+ GC + V+ CQ+ + A L+ + K P+ + Y +I
Sbjct: 457 EECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKK 516
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G + EA+++ M +G +P+ +I + +I + ++ + + M ++ +
Sbjct: 517 GRIEEATELTLKMLKKGIDPTPVTYRTVIHRYGQIGRVEDLLNLLDKMLTRQE---CRTA 573
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
+ VI+ +C G + A +L ++ + D T ++ L +G AYKV +
Sbjct: 574 FNQVIEKLCTFGNLEAADKLLGKVLRTASRIDANTCHVLMESYLRKGIPLSAYKVACRMF 633
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
PD+ L + K L++ ++ EA +F ++RG
Sbjct: 634 SRSLIPDLKLCEKVCKKLMQEGKSEEADNLFLRFVERG 671
>gi|449511317|ref|XP_004163923.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Cucumis sativus]
Length = 495
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 147/305 (48%), Gaps = 11/305 (3%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRR--RLVNDKTFKIALM 116
FF YT K + F H S + + M+ I+G+SR D W+ L ++ + L++ +T + L
Sbjct: 94 FFNYTAKRRG-FYHTSFSVDTMLYILGRSRKFDKIWDVLLDVKFKDPSLISLRTVMVVLG 152
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPN 176
+A+V +++ V F E+ + N +++TLCQ K +++A+ + L +PN
Sbjct: 153 RIAKVCSVRQTVESFRKFKKFVPEFDVTCFNALLRTLCQEKSMMDARNVYHGLKSMFRPN 212
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
+ L+ G+ EA ++ M + G +P + + +++ + K + D+A KV
Sbjct: 213 LQTFNILLSGWKSSE---EAEGFFDEMIEMGVKPDVVSYNCLVDVYCKNREMDKAFKVVG 269
Query: 237 MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR 296
MR + + + TY +I + G+ +A +L+EM + G D ++ I
Sbjct: 270 KMRDEDI-PADVITYTSIIGGLGLVGQPDKARNILKEMKEYGCYPDVAAYNATIRNFCIA 328
Query: 297 GRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
RL EA+ +++E+ P+ + Y+ + + A ++R M+ GC P +
Sbjct: 329 KRLHEAFDLLDEMVNKGLSPNATTYNLFFRIFFWSNDLQSAWNLYRRMMDTGCLPNTQSC 388
Query: 353 IMLLQ 357
+ L++
Sbjct: 389 LFLVR 393
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 95/210 (45%), Gaps = 11/210 (5%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+++N +VD+ K+R +D ++ + +M + D T+ + L V + K N
Sbjct: 246 VSYNCLVDVYCKNREMDKAFKVVGKMRDEDIPADVITYTSIIGGLGLVGQPDKARNILKE 305
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGD 192
M + GC + N ++ C K + EA L+ ++ ++ + PN Y + + D
Sbjct: 306 MKEYGCYPDVAAYNATIRNFCIAKRLHEAFDLLDEMVNKGLSPNATTYNLFFRIFFWSND 365
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
L A ++ M D G P+ ++ F K K++ A++++ M K G +Y
Sbjct: 366 LQSAWNLYRRMMDTGCLPNTQSCLFLVRLFKKYEKEEMALELWNDMIQK-----GFGSYI 420
Query: 253 IV----IDWMCKRGKISQAYTMLEEMFKRG 278
+V D +C GK+ +A + +M +G
Sbjct: 421 LVSEELFDLLCDLGKLIEAESCFLQMVDKG 450
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 118/230 (51%), Gaps = 19/230 (8%)
Query: 149 VVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEG 207
++K LC + EA L+ ++ + PN + Y LI GYC G++ +A ++ + MT++G
Sbjct: 374 LIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKG 433
Query: 208 FEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQA 267
EP+I +I+ + K K + AM ++ M +K + + Y +ID K G +A
Sbjct: 434 IEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLP-DVVAYTALIDGHFKDGNTKEA 492
Query: 268 YTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV-------------VEEIEK--- 311
+ + +EM + G+ + TLS +I GL GR+ +A K+ E+++
Sbjct: 493 FRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLC 552
Query: 312 -PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL 360
P+ +Y LI+GL R +A++ F +M G P + T I+++QGH
Sbjct: 553 SPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHF 602
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 153/347 (44%), Gaps = 23/347 (6%)
Query: 78 NRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMND 136
N ++D + K D W+ +M R N T+ + + K F M +
Sbjct: 162 NMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIE 221
Query: 137 CGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIE 195
++ + +++ LC + EA+ + + + + PN Y ++ GYC + + +
Sbjct: 222 KKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKK 281
Query: 196 ASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK-VFQMMRVKRMDDLGLSTYRIV 254
A +++ M +G P++ +I+ K ++ A K + M + ++ + Y +
Sbjct: 282 ALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFV--YNCL 339
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK--- 311
ID CK G +S+A ++ E+ K I D T S +I GL R+ EA +++E++K
Sbjct: 340 IDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGF 399
Query: 312 -PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR----- 365
P+ Y+ LI G + +A +V +M ++G EP + T+ L+ G+ K G+
Sbjct: 400 LPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYC-KAGKMEAAM 458
Query: 366 --------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVE 404
KG P V T + G K G + +A + + + G+
Sbjct: 459 GLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLH 505
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 105/247 (42%), Gaps = 22/247 (8%)
Query: 97 LQEMGRRR-LVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQ 155
LQEM ++ L N T+ + + ++K + M + G E ++ + ++ C+
Sbjct: 391 LQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCK 450
Query: 156 RKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDV 214
+ A L ++ + + P+ +AY LI G+ G+ EA ++ M + G P++
Sbjct: 451 AGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFT 510
Query: 215 VDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST--------------YRIVIDWMCK 260
+ +I+ K + +A+K+F + D G T Y +I +C
Sbjct: 511 LSCLIDGLCKDGRISDAIKLF--LAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCT 568
Query: 261 RGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISL 316
G+I +A +M G+ D T II G LR+ + +I K P+ S+
Sbjct: 569 DGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSV 628
Query: 317 YHGLIKG 323
Y L KG
Sbjct: 629 YRVLAKG 635
>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 148/324 (45%), Gaps = 32/324 (9%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLV---VEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLI 194
G E + L+ ++ C V + ILKL ++P+ + + L+ G C G +
Sbjct: 92 GIEQDIHSLSILINCFCHLHRVDFGLSVLSKILKLG--LEPSIVTFTTLLNGLCMEGKMD 149
Query: 195 EASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG----LST 250
+ +++ M G +P++ + +I + K K +EA+ +K+M+ +G +
Sbjct: 150 QVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGF-----LKQMEKVGCVPNVVN 204
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y +ID C RG++ +A ++ + M +G + T +S++ G R+ EA ++++E
Sbjct: 205 YSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETL 264
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG-- 364
+ PDI + +I GL R R A Q+FR + G P + TY +LL G L K G
Sbjct: 265 RKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDG-LCKHGNL 323
Query: 365 -----------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
R P + TI + L K GK D + R+++ G++ + Y
Sbjct: 324 EEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTAL 383
Query: 414 LHYYSNEEGVVMFEEVGKKLREVG 437
+ E ++ ++ +K+ E G
Sbjct: 384 VGALCKEGLIIEAHKLFRKMEEDG 407
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 118/246 (47%), Gaps = 21/246 (8%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
PN + Y LI GYC G + EA +++LM +G P++ ++ + KI + +EA+++
Sbjct: 200 PNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQL 259
Query: 235 F-QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
+ +R + D + T+ +I +C+ G+ A + + G + +T ++ GL
Sbjct: 260 LDETLRKGLVPD--IVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGL 317
Query: 294 LARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTM 349
G L EA+ + +E++ KP++ +Y LI L + + ++ ++F +I G +P +
Sbjct: 318 CKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNV 377
Query: 350 HTYIMLLQGHLGKRG-------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVE 396
+TY L+ G L K G G P + + G ++ A + VE
Sbjct: 378 YTYTALV-GALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVE 436
Query: 397 RVMNRG 402
++NRG
Sbjct: 437 EMVNRG 442
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 133/278 (47%), Gaps = 7/278 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVR-ELKKMVNFF 131
N T+N +++ + KS + L++M + V + L+ +R ++ + + F
Sbjct: 166 NVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVF 225
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDV 190
+M GC ++ ++ C+ + + EA L+ + L + + P+ + + +I G C
Sbjct: 226 DLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRA 285
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G + A +++ + G P+I +++ K +EA +FQ M+ + L
Sbjct: 286 GRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKP-NLVI 344
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y I+ID +CK GKI + + G++ + T ++++ L G + EA+K+ ++E
Sbjct: 345 YTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKME 404
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+ PD Y+ +I+G L+ + A Q+ EM+ RG
Sbjct: 405 EDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRG 442
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 157/370 (42%), Gaps = 55/370 (14%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
N TF I + + K V F ++M C N ++ LC++ + +A+ L+
Sbjct: 207 NVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLL 266
Query: 167 LKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSI------------- 212
+ + S + PN Y L+ GYC +G L EA+ + LMT P +
Sbjct: 267 MDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNE 326
Query: 213 --------------------DVV--DKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
DVV + +I + +K EA K+ + M K + + T
Sbjct: 327 GRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAV-T 385
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
+ I++ W CK GK+ A + +M + G D +T +++I G G + EA++ ++E+
Sbjct: 386 HNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMG 445
Query: 311 KPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG----K 362
+ ++ + + +++ L R ++ EA ++ KRG +Y L+ G+
Sbjct: 446 RKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVD 505
Query: 363 RGRKGPDPL---------VNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
R K D + V ++ I +GGL + GK+ A + ++ G+ YN
Sbjct: 506 RALKLWDEMKEKEIIPSTVTYNCI-IGGLCQCGKTEQAISKLNELLESGLLPDETTYNTI 564
Query: 414 LHYYSNEEGV 423
LH Y E V
Sbjct: 565 LHGYCREGDV 574
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 160/371 (43%), Gaps = 77/371 (20%)
Query: 63 TQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEV 121
T+ + F+ + +T+N +++ K+ N+ + T+ EMGR+ + D T L TL
Sbjct: 407 TKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCRE 466
Query: 122 RELKK-----------------------MVNFFHIMNDCGCEYSLEM------------- 145
++L++ +V +F D + +L++
Sbjct: 467 KKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFK---DGNVDRALKLWDEMKEKEIIPST 523
Query: 146 --LNKVVKTLCQRKLVVEAKYLILKLSEWIK----PNEIAYGWLIKGYCDVGDLIEASKI 199
N ++ LCQ +A I KL+E ++ P+E Y ++ GYC GD+ +A +
Sbjct: 524 VTYNCIIGGLCQCGKTEQA---ISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQF 580
Query: 200 WNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMC 259
N M + F+P + + ++ ++A+K+F V + + TY +I +C
Sbjct: 581 HNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTW-VSKGKAIDTVTYNTLITSLC 639
Query: 260 KRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA----YKVVEEIEKPDIS 315
K G++ A+ +L EM ++ + D+ T ++II L GR+REA K++E+ P
Sbjct: 640 KEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQV 699
Query: 316 L-----------------------YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
L Y IK L + ++A ++F E ++G TY
Sbjct: 700 LQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTY 759
Query: 353 IMLLQGHLGKR 363
I L+ G + +R
Sbjct: 760 INLMDGLIKRR 770
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 97/458 (21%), Positives = 173/458 (37%), Gaps = 64/458 (13%)
Query: 7 HLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQICNNFPLSWRPVYL--FFQYTQ 64
L++ T + P L++ + LT L I ++ L RP L FF++ Q
Sbjct: 22 ELIQTITTILASNNMPLQALNTYIPQ----LTPPLVLSILSSKTLISRPNILISFFKWAQ 77
Query: 65 KAQPCFAHN------------------SITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV 106
P F HN S + ++ I R DL L+ + +
Sbjct: 78 TNLPTFPHNSLPSLLSLLPSLFSHRKFSDAKSLLLGFIATDRRHDLHLSILRLTSPSKAL 137
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
D A+ + + F M +L N ++ +L + +
Sbjct: 138 LD----TAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSR 193
Query: 167 LKLSEWIK----PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETF 222
++ IK PN + +I GYC +A + N+M P + +++
Sbjct: 194 EAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDAL 253
Query: 223 FKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEAD 282
K + +A + M+ + + +TY I++ CK G + +A ++E M + + D
Sbjct: 254 CKKGRLGDARDLLMDMKSRGLLP-NRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPD 312
Query: 283 NLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFR 338
T + +I GL GR+ EA+K+ +E+E PD+ Y+ LI G L + EA ++
Sbjct: 313 VWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLE 372
Query: 339 EMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERV 398
EM ++G +P T+ I V K GK DA+ + ++
Sbjct: 373 EMSEKGVKPNAVTH-----------------------NIMVKWYCKEGKMDDASNTITKM 409
Query: 399 MNRGVEVPRFDYNKFLHYYSNE----EGVVMFEEVGKK 432
G YN ++ Y E +E+G+K
Sbjct: 410 EESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRK 447
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 96/211 (45%), Gaps = 22/211 (10%)
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
++T+ IVI C K A L M K DN+T ++I+ L +GRL +A ++
Sbjct: 208 VNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLM 267
Query: 308 EIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
+++ P+ + Y+ L+ G ++ +EA V M + P + TY ML+ G L
Sbjct: 268 DMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLING-LCNE 326
Query: 364 GRKG---------------PDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRF 408
GR PD +V+++T+ + G ++ K +A K +E + +GV+
Sbjct: 327 GRIEEAFKLRDEMENLKLLPD-VVSYNTL-INGCLEWSKISEAFKLLEEMSEKGVKPNAV 384
Query: 409 DYNKFLHYYSNEEGVVMFEEVGKKLREVGLA 439
+N + +Y E + K+ E G +
Sbjct: 385 THNIMVKWYCKEGKMDDASNTITKMEESGFS 415
>gi|297605515|ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa Japonica Group]
Length = 690
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 126/257 (49%), Gaps = 11/257 (4%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT- 117
FF+ + P N++T++ +V + + N+ + E E D +++
Sbjct: 303 FFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISG 362
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPN 176
L + L+ + M + G + + N ++ C++K + EA L+ ++ E I+P+
Sbjct: 363 LTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPD 422
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
Y L+ G C GD ++ M D+G +PS+ ++ + K+ K DEA+++
Sbjct: 423 VCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRIL- 481
Query: 237 MMRVKRMDDLGLST----YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
+ MD+ G+ Y +ID++CKRG + A + +EM ++ + A+ T ++++ G
Sbjct: 482 ----RSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKG 537
Query: 293 LLARGRLREAYKVVEEI 309
L + +A+++++++
Sbjct: 538 LRDKNMPEKAFELMDQM 554
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 162/391 (41%), Gaps = 31/391 (7%)
Query: 70 FAHNSI--TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKM 127
FA NSI R+ D+ G +R + +Q R + T+ I + L + +
Sbjct: 137 FAFNSILAALARVRDVPGMAR----IYALMQGCASVR-PDVVTYGILVNGLCKAGRVGDA 191
Query: 128 VNFFHIMN--DCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI---LKLSEWIKPNEIAYGW 182
+ M+ D + LN VV LC+ V EA + + PN + Y
Sbjct: 192 LRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNC 251
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
LI +C VG++ A ++ M +EG +I ++ ++ + + A++ F+ R
Sbjct: 252 LIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVW 311
Query: 243 MDDLGLS-TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
+ G + TY ++ + + A + E G D + ++I GL GRL +
Sbjct: 312 PEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLED 371
Query: 302 AYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
A + ++ K D Y+ LI G R +R EA ++ +EM + G P + TY LL
Sbjct: 372 ACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLS 431
Query: 358 GH------------LGKRGRKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVE 404
G LGK G P ++ F T+ V G K GK +A + + + G+
Sbjct: 432 GSCKAGDFAAVDELLGKMIDDGCQPSVITFGTL-VHGYCKVGKIDEALRILRSMDESGIH 490
Query: 405 VPRFDYNKFLHYYSNEEGVVMFEEVGKKLRE 435
YN + + V + E+ +++E
Sbjct: 491 PNNVIYNTLIDFLCKRGDVDLAIELFDEMKE 521
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 125/284 (44%), Gaps = 32/284 (11%)
Query: 164 YLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT--DEGFEPSIDVVDKMIET 221
Y +++ ++P+ + YG L+ G C G + +A ++ + M+ D P + ++ +++
Sbjct: 159 YALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDG 218
Query: 222 FFKINKDDEAMK-VFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIE 280
K + EA+ V Q M TY +ID C+ G IS AY ++E+M G+
Sbjct: 219 LCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVP 278
Query: 281 ADNLTLSSIIYGLLARGRLREAYKVVEEIE------KPDISLYHGLIKGLLRLRRAREAT 334
+ +TL++I+ GL GR A + E K + Y L+ LL A
Sbjct: 279 QNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAM 338
Query: 335 QVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKY 394
++F E + G H+ PD ++ F + GL +AG+ DA
Sbjct: 339 ELFHEKMSEG-----HS----------------PDAIMYF--TMISGLTQAGRLEDACSM 375
Query: 395 VERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
+ G ++ YN + + ++ + E+ ++++EVG+
Sbjct: 376 ASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGI 419
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 90/418 (21%), Positives = 168/418 (40%), Gaps = 90/418 (21%)
Query: 90 IDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKV 149
+DL L G + + + L LAE +K + + ++ M D G + + LN +
Sbjct: 144 VDLVRNQLNTFGVQ--ADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTL 201
Query: 150 VKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGF 208
+K LC+ V A ++ ++S + P+E + L++G+ + G + A ++ M + G
Sbjct: 202 IKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGC 261
Query: 209 EPSIDVVDKMIETFFKINKDDEAMKVFQ---------------------------MMRVK 241
P+ V+ +I + K+ + ++A+ Q +K
Sbjct: 262 SPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALK 321
Query: 242 RMD-------DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
MD D + TY VI+ + K G++ +A ++ +M RG D T +++I L
Sbjct: 322 VMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALC 381
Query: 295 ARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
++ RL EA + E+ PD+ ++ LI L ++ ++F EM GC P
Sbjct: 382 SQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEV 441
Query: 351 TYIMLLQGHLGKRGR--------------KGPDPLVNFDTI------------------- 377
TY +L+ HL G+ P V ++TI
Sbjct: 442 TYNILID-HLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQ 500
Query: 378 ---------------FVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE 420
+ GL KA + DA + +E+++ G++ YN L +Y +
Sbjct: 501 MDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQ 558
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 140/322 (43%), Gaps = 55/322 (17%)
Query: 147 NKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N V LCQ V A K + L L E P+ Y +I G+L EA I N M D
Sbjct: 304 NTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVD 363
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMD-------------------DL 246
G P + +I N+ +EA+ + + + VK + L
Sbjct: 364 RGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHL 423
Query: 247 GLS---------------TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIY 291
G+ TY I+ID +C GK+ A +L+EM G +T ++II
Sbjct: 424 GIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIID 483
Query: 292 GLLARGRLREAYKVVEEIEKPDIS----LYHGLIKGLLRLRRAREATQVFREMIKRGCEP 347
L + R+ EA +V ++++ IS ++ LI GL + +R +AT++ +M+K G +P
Sbjct: 484 ALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQP 543
Query: 348 TMHTYIMLLQGHLGKRG--RKGPDPL------------VNFDTIFVGGLVKAGKSLDAAK 393
+ TY +L H K+G +K D L V + T+ + GL KAG++ A K
Sbjct: 544 SNITYNSILT-HYCKQGDLKKAADILETMTANGFEIDVVTYGTL-INGLCKAGRTQVALK 601
Query: 394 YVERVMNRGVEVPRFDYNKFLH 415
+ + +G+ YN +
Sbjct: 602 LLRGMRIKGIRPTPKAYNPVIQ 623
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 134/292 (45%), Gaps = 7/292 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
++ TFN ++ + ++ + +E+ + L D TF I + L +V + + F
Sbjct: 369 DTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLF 428
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKP-NEIAYGWLIKGYCDV 190
M GC N ++ LC +V A L+ ++ P + + Y +I C
Sbjct: 429 EEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQ 488
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
+ EA ++++ M G S + +I+ K + D+A ++ + M + + + T
Sbjct: 489 MRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNI-T 547
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y ++ CK+G + +A +LE M G E D +T ++I GL GR + A K++ +
Sbjct: 548 YNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMR 607
Query: 311 ----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+P Y+ +I+ L R R+A +FREM + G P TY ++ +G
Sbjct: 608 IKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRG 659
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 131/292 (44%), Gaps = 8/292 (2%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIM 134
TFN +++ + K + L +EM D+ T+ I + L + +L ++ M
Sbjct: 407 TFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEM 466
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDL 193
GC S N ++ LC++ + EA+ + ++ + I + + + LI G C +
Sbjct: 467 ESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRI 526
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
+A+++ M EG +PS + ++ + K +A + + M + + + TY
Sbjct: 527 DDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFE-IDVVTYGT 585
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI---- 309
+I+ +CK G+ A +L M +GI + +I L R LR+A + E+
Sbjct: 586 LINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVG 645
Query: 310 EKPDISLYHGLIKGLLRLRRA-REATQVFREMIKRGCEPTMHTYIMLLQGHL 360
E PD Y + +GL R +EA EM+ +G P ++ ML +G L
Sbjct: 646 EPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLL 697
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 128/273 (46%), Gaps = 15/273 (5%)
Query: 65 KAQPCFAHNSITFNRMVD---IIGKSRN-IDLFWETLQEMGRRRLVNDKTFKIALMTLAE 120
K+ C A + +T+N ++D +GK N +DL E R V T AL
Sbjct: 432 KSSGC-APDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMR 490
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIA 179
+ E +++ F M+ G S N ++ LC+ K + +A LI ++ E ++P+ I
Sbjct: 491 IEEAEEV---FDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNIT 547
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
Y ++ YC GDL +A+ I MT GFE + +I K + A+K+ + MR
Sbjct: 548 YNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMR 607
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL-ARGR 298
+K + Y VI + +R + A ++ EM + G D LT + GL G
Sbjct: 608 IKGIRPTP-KAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGP 666
Query: 299 LREAYK-VVEEIEK---PDISLYHGLIKGLLRL 327
++EA+ +VE + K P+ S + L +GLL L
Sbjct: 667 IKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNL 699
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 116/255 (45%), Gaps = 39/255 (15%)
Query: 171 EWIKPNEIAYGWLIK--GYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
E P+ Y +I+ G DL+E + M EG E VV +E++ ++ +
Sbjct: 83 EDFAPSRAVYEEIIQKLGTAGAFDLMEG--LVREMRREGHEAGAGVVRSFVESYARLRRF 140
Query: 229 DEAMKVFQMMRVKRMDDLGL----STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNL 284
D+A+ + + +++ G+ + Y +++ + + ++ ++ EM RGI+ D +
Sbjct: 141 DDAVDLVR----NQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVV 196
Query: 285 TLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREM 340
TL+++I L ++R A ++EE+ PD + + L++G + A +V +M
Sbjct: 197 TLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKM 256
Query: 341 IKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMN 400
++ GC PT T +L+ G+ K G+ DA Y+++ +
Sbjct: 257 METGCSPTRVTVNVLINGY-----------------------CKMGRVEDALGYIQKEIA 293
Query: 401 RGVEVPRFDYNKFLH 415
G E + YN F+H
Sbjct: 294 DGFEPDQVTYNTFVH 308
>gi|225453152|ref|XP_002272930.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Vitis vinifera]
Length = 502
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 177/399 (44%), Gaps = 31/399 (7%)
Query: 40 EFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQE 99
E L++ FP S FF+++ Q H+ ++N +VD++GK+ D W+ ++
Sbjct: 91 EDSLKLSYGFPGS---AVKFFRWSGH-QLNDNHSPYSWNLVVDMLGKNFLFDAMWDAVKS 146
Query: 100 MGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLV 159
M ++ L++ TF + +++ + F +M GC + LN ++ +C+
Sbjct: 147 MKKQGLLSLATFASIFSSYVIADRVREAIMTFDVMEQYGCPRDIVALNSLLSAICRDGRT 206
Query: 160 VEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT-DEGFEP-SIDVVDK 217
V+A + + I+P+ Y L++G+ G+ A + ++ M D G++P ++ D
Sbjct: 207 VQAAEFLRNVRGLIRPDADTYAILLEGWESEGNCGAARQTFDEMVMDIGWDPGNVSAYDS 266
Query: 218 MIETFFK-INKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFK 276
+ + EAMK F++MR R G+ YRI + K A + + M
Sbjct: 267 FLNALLHGPDGRREAMKFFEIMR-DRQCSPGMRFYRIGLQECVKTSDSKGAQLLWQTMLS 325
Query: 277 RGIEADNLTLSSIIYGL--------LARGRLREAYKVVEEIEKPDISLYHGLIKGLLRLR 328
R I + + + + L +ARG L E +V PD Y+ L + L+R R
Sbjct: 326 RNICRPDTEMYNSMIALHCSCDNIVMARGMLDE---MVCNGAFPDSETYNVLFRFLIRRR 382
Query: 329 RAREATQVFREMIKRGCEPTMHT-----YIMLLQGHLGKRGRKGPDPLVNFDT------- 376
+ EA +F EM++ C P + I L G + K + + N D+
Sbjct: 383 KLEEAFSIFSEMVQNECVPDLTNCNAAVRIYLDLGDVYKAIKVWKYIIENHDSGLEETGN 442
Query: 377 IFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH 415
+ V GL + +A KY + ++ RG+++ +K H
Sbjct: 443 LLVTGLRDHDRIPEAVKYAKDMIVRGIKLTSSTLSKLKH 481
>gi|449466251|ref|XP_004150840.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Cucumis sativus]
Length = 495
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 147/305 (48%), Gaps = 11/305 (3%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRR--RLVNDKTFKIALM 116
FF YT K + F H S + + M+ I+G+SR D W+ L ++ + L++ +T + L
Sbjct: 94 FFNYTAKRRG-FYHTSFSVDTMLYILGRSRKFDKIWDVLLDVKFKDPSLISLRTVMVVLG 152
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPN 176
+A+V +++ V F E+ + N +++TLCQ K +++A+ + L +PN
Sbjct: 153 RIAKVCSVRQTVESFRKFKKFVPEFDVTCFNALLRTLCQEKSMMDARNVYHGLKSMFRPN 212
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
+ L+ G+ EA ++ M + G +P + + +++ + K + D+A KV
Sbjct: 213 LQTFNILLSGWKSSE---EAEGFFDEMIEMGVKPDVVSYNCLVDVYCKNREMDKAFKVVG 269
Query: 237 MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR 296
MR + + + TY +I + G+ +A +L+EM + G D ++ I
Sbjct: 270 KMRDEDI-PADVITYTSIIGGLGLVGQPDKARNILKEMKEYGCYPDVAAYNATIRNFCIA 328
Query: 297 GRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
RL EA+ +++E+ P+ + Y+ + + A ++R M+ GC P +
Sbjct: 329 KRLHEAFDLLDEMVNKGLSPNATTYNLFFRIFFWSNDLQSAWNLYRRMMDTGCLPNTQSC 388
Query: 353 IMLLQ 357
+ L++
Sbjct: 389 LFLVR 393
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 95/210 (45%), Gaps = 11/210 (5%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHI 133
+++N +VD+ K+R +D ++ + +M + D T+ + L V + K N
Sbjct: 246 VSYNCLVDVYCKNREMDKAFKVVGKMRDEDIPADVITYTSIIGGLGLVGQPDKARNILKE 305
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGD 192
M + GC + N ++ C K + EA L+ ++ ++ + PN Y + + D
Sbjct: 306 MKEYGCYPDVAAYNATIRNFCIAKRLHEAFDLLDEMVNKGLSPNATTYNLFFRIFFWSND 365
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYR 252
L A ++ M D G P+ ++ F K K++ A++++ M K G +Y
Sbjct: 366 LQSAWNLYRRMMDTGCLPNTQSCLFLVRLFKKYEKEEMALELWNDMIQK-----GFGSYI 420
Query: 253 IV----IDWMCKRGKISQAYTMLEEMFKRG 278
+V D +C GK+ +A + +M +G
Sbjct: 421 LVSEELFDLLCDLGKLIEAESCFLQMVDKG 450
>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 347
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 146/303 (48%), Gaps = 24/303 (7%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLIEA 196
GC + N ++ LC++ +V A+ L+ ++ + +PN I Y LI +C G L EA
Sbjct: 9 GCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEA 68
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVID 256
+ + M+ +G + + +I K K +A+ +F M K + T+ +I
Sbjct: 69 RNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKP-DIFTFNSLIF 127
Query: 257 WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI-----EK 311
+CK K +A + ++M G+ A+ +T +++I+ L RG ++EA K+V ++
Sbjct: 128 GLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPL 187
Query: 312 PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG------- 364
DI+ Y+GLIK L R + +F +M+ +G P + +L+ G L + G
Sbjct: 188 DDIT-YNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILING-LCRTGNIQHALE 245
Query: 365 ------RKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
+G P +V ++++ + GL K G++ +A +++ G+ YN + ++
Sbjct: 246 FLRDMIHRGLTPDIVTYNSL-INGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWH 304
Query: 418 SNE 420
E
Sbjct: 305 CKE 307
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 118/264 (44%), Gaps = 19/264 (7%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
LS P+ Y LI G C G L+ A ++ N M +G EP++ +I+ F K +
Sbjct: 6 LSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRL 65
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
+EA V M K + L Y +I +CK K+ A M +M +G + D T +S
Sbjct: 66 EEARNVLDEMSGKGL-ALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 124
Query: 289 IIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
+I+GL + EA + +++ + Y+ LI LR +EA ++ +M+ RG
Sbjct: 125 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 184
Query: 345 CEPTMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAGKSLDA 391
C TY L++ L + G KG +P I + GL + G A
Sbjct: 185 CPLDDITYNGLIKA-LCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHA 243
Query: 392 AKYVERVMNRGVEVPRFDYNKFLH 415
+++ +++RG+ YN ++
Sbjct: 244 LEFLRDMIHRGLTPDIVTYNSLIN 267
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 130/291 (44%), Gaps = 7/291 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALMTLAEVRELKKMVNFF 131
N IT+ ++D K ++ L EM G+ +N + + L + +++ +N F
Sbjct: 48 NVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMF 107
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDV 190
M+ GC+ + N ++ LC+ EA L L E + N I Y LI +
Sbjct: 108 GDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRR 167
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G + EA K+ N M G + +I+ + ++ + +F+ M K ++ +S
Sbjct: 168 GAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISC 227
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
I+I+ +C+ G I A L +M RG+ D +T +S+I GL GR +EA + ++++
Sbjct: 228 -NILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQ 286
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
PD Y+ LI + +A + + G P T+ +L+
Sbjct: 287 VEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVS 337
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
TY +I +CK+G + A ++ EM +G E + +T + +I GRL EA V++E+
Sbjct: 16 TYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEM 75
Query: 310 EKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR 365
++L Y+ LI L + + ++A +F +M +GC+P + T+ L+ G +
Sbjct: 76 SGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLC--KVN 133
Query: 366 KGPDPLVNFDTIFVGGLV--------------KAGKSLDAAKYVERVMNRGVEVPRFDYN 411
K + L + + + G++ + G +A K V ++ RG + YN
Sbjct: 134 KFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYN 193
Query: 412 KFLHYYSN----EEGVVMFEEVGKK 432
+ E+G+ +FE++ K
Sbjct: 194 GLIKALCRAGNIEKGLALFEDMMSK 218
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 94/231 (40%), Gaps = 10/231 (4%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
F NS+ F + + + L+ + L E + T A + ++E K+VN
Sbjct: 120 FTFNSLIFG-LCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVN 178
Query: 130 --FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKG 186
F GC N ++K LC+ + + L + S+ + PN I+ LI G
Sbjct: 179 DMLFR-----GCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILING 233
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
C G++ A + M G P I + +I K + EA+ +F ++V+ +
Sbjct: 234 LCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPD 293
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
+ TY +I W CK G A+ +L G + +T ++ + G
Sbjct: 294 AI-TYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 343
>gi|255660774|gb|ACU25556.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 418
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 140/301 (46%), Gaps = 48/301 (15%)
Query: 104 RLVNDKTFKIALMTLAEVRE-------LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQR 156
RL + F++ T +V E K + F+ +CG SL N ++ + +
Sbjct: 90 RLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKE 149
Query: 157 KLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVV 215
+ A+ + +++W ++P+ +++ L+ GY +GDL E ++ N M G +P +
Sbjct: 150 GEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTY 209
Query: 216 DKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMF 275
+I K +K D+A ++F M + G+ T+ +ID CK G++ A + ++M
Sbjct: 210 SVLINGLCKESKMDDANELFDEMLDNGLVPNGV-TFTTLIDGHCKNGRVDLAMEIYKQML 268
Query: 276 KRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPD------------------ 313
+ + AD +T +++IYGL +G L++A +++E+ KPD
Sbjct: 269 SQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLE 328
Query: 314 -------------ISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
I L Y LI GL + R+ +A ++ REM+ G +P + TY M++
Sbjct: 329 TAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388
Query: 357 Q 357
Sbjct: 389 N 389
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 38/208 (18%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
N +TF ++D K+ +DL E ++M + L D
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSAD------------------------ 275
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVG 191
L N ++ LC++ + +A+ LI ++S + +KP++I Y LI G C G
Sbjct: 276 ----------LITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEG 325
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLST 250
DL A + M E +I + + +A K+ +M+ V ++G T
Sbjct: 326 DLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG--T 383
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRG 278
Y ++I+ CK+G + +L+EM + G
Sbjct: 384 YTMIINEFCKKGDVWTGSKLLKEMQRDG 411
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/413 (22%), Positives = 185/413 (44%), Gaps = 45/413 (10%)
Query: 60 FQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEM-GRRRLVNDKTFKIALMTL 118
F+ + Q + + ++ ++ ++ +S ID E E+ GR + T + L
Sbjct: 325 FEACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQEL 384
Query: 119 AEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEI 178
+ + ++ M G + + ++ LC+ + EA+ + + I
Sbjct: 385 CKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSS 444
Query: 179 A---YGWLIKGYCDVGDLIEASKIWNLMTDE-GFEPSIDVVDKMIETFFKINKDDEAMKV 234
+ Y L+ C + +A I++ M E F P + +I+ F KI++ A K+
Sbjct: 445 SCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKL 504
Query: 235 FQMMRVKRMDDLG----LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
+ K+M DL ++TY ++ + ++G+I+ A + EEM G D +T S++I
Sbjct: 505 Y-----KQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLI 559
Query: 291 YGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
+G + +A+++ E + +P+ Y+ L+ GL + + EA ++FR+M++RGC+
Sbjct: 560 HGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCD 619
Query: 347 PTMHTYIMLLQG--HLGKRGR----------KGPDPLVNFDTIFVGGLVKAGKSLDAAKY 394
P TY LL G ++GK + KG DP V + G +AGK +A +
Sbjct: 620 PDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQL 679
Query: 395 VERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLADLADIFQR 447
+ +++R + +N +M + + K R L D ++F+R
Sbjct: 680 FQVMVSRQCKPDTVSHN------------IMIDGLSKAKR---LDDAVEVFER 717
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 112/221 (50%), Gaps = 7/221 (3%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T+ + + R+ + F M GC + N ++ LC+ EA L K+
Sbjct: 554 TYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKM 613
Query: 170 SE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
E P+ + Y L+ G+C+VG + +A ++++ M +G +P + + +++ FF+ K
Sbjct: 614 VERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKP 673
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFK-RGIEADNLTLS 287
EA ++FQ+M V R ++ I+ID + K ++ A + E M + G D +T +
Sbjct: 674 GEAKQLFQVM-VSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYN 732
Query: 288 SIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGL 324
S+I+GL RL EA KV +EI++ PD ++ L++ +
Sbjct: 733 SLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAI 773
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 138/311 (44%), Gaps = 23/311 (7%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMT 117
FF++ Q F H+ T+N ++D + + R++ + ++M + +V N T+ + + +
Sbjct: 116 FFRWLQARN--FKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQS 173
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLIL---KLSEWIK 174
R + V FF M D G + S + KV T C + E ++ + L + +
Sbjct: 174 SCYERNSDEAVRFFGEMVDKGFKPSSTLYQKV--TECLKATGKEGEFSRVFGRDLEKRVA 231
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
+ L+ + IEASK++ M G +P + M+ K+ DEA K+
Sbjct: 232 VEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKL 291
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
F M V+ L + + +CK GKI QA+ M ++L+ S +Y +L
Sbjct: 292 FLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTM------QESLSSSQPVYDML 345
Query: 295 AR-----GRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGC 345
R GR+ +A + EI +P H +I+ L + R A + MIKRG
Sbjct: 346 IRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGY 405
Query: 346 EPTMHTYIMLL 356
P M T+ ML+
Sbjct: 406 CPDMATHSMLI 416
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 96/195 (49%), Gaps = 6/195 (3%)
Query: 169 LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
+S +PN + Y L+ G C EA +++ M + G +P ++ F + K
Sbjct: 579 ISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKI 638
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
++A++VF M V + D + Y ++ + GK +A + + M R + D ++ +
Sbjct: 639 EQAVEVFDEM-VSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNI 697
Query: 289 IIYGLLARGRLREAYKVVEEIEK-----PDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
+I GL RL +A +V E +E+ PD+ Y+ LI GL +R EA +VF+E+ +
Sbjct: 698 MIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRL 757
Query: 344 GCEPTMHTYIMLLQG 358
P H + +LL+
Sbjct: 758 KLSPDPHAFNVLLEA 772
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 99/224 (44%), Gaps = 21/224 (9%)
Query: 181 GWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRV 240
G +IK D G EA + + F+ + + +++ + +A +VF+ M
Sbjct: 101 GAVIKHLRDGG---EALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVA 157
Query: 241 KRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLR 300
+ + G TY +++ C +A EM +G + + + L A G+
Sbjct: 158 QGVVPNGF-TYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEG 216
Query: 301 EAYKVV-EEIEK---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEP--TMHTYIM 354
E +V ++EK ++ L L+ + +A EA+++FR M+K GC+P T+++Y++
Sbjct: 217 EFSRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMV 276
Query: 355 LLQGHLG----------KRGRKGPDPLVNFD-TIFVGGLVKAGK 387
L L + + PL N T F+ GL K+GK
Sbjct: 277 LAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGK 320
>gi|356551785|ref|XP_003544254.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g09900-like [Glycine max]
Length = 603
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 142/294 (48%), Gaps = 27/294 (9%)
Query: 73 NSITFNRMVDII---GKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
N +T+N ++ I G+ + F + L G + V ++ I L +L+ +
Sbjct: 294 NVVTYNALIKGICNEGRLDEVIRFLKNLPSYGYQPDV--ISYTIVLHSLSSGGRWTDAMK 351
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWI-KPNEIAYGWLIKGYC 188
M GC ++ N ++ LCQ+ L+ +A ++ + + + PN I+Y I G+C
Sbjct: 352 LLASMLCKGCSLNVVTFNTLINFLCQKGLLGKAFNVLEMIXKHVCTPNSISYNPSIGGFC 411
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
+ E S +M G P I + ++ K K D+A+++ + + K + +
Sbjct: 412 N-----EKSXYLEIMVSRGCYPDIVTYNILLAALCKDRKVDDAVEILKQLSFKGLKP-DV 465
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY I+ID + K GK A +LEE +G++ + +T +S++ G+ +G++ EA K+
Sbjct: 466 ITYSIIIDGLLKVGKTDLALELLEEACTKGLKPNLITFTSVVGGISRKGKVHEAIKIFHF 525
Query: 309 IE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+E +P+ Y+ +I GL + ++ RGC+PT TY +L++G
Sbjct: 526 LEGLGIRPNAFAYNLIIMGLCKTQQT-----------SRGCKPTEATYNILVKG 568
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 136/281 (48%), Gaps = 23/281 (8%)
Query: 148 KVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDE 206
+++ C+ V +A K LI +S+ KPN + Y LIKG C+ G L E + +
Sbjct: 265 ELIDAACKDSRVGQAMKLLIEMVSKECKPNVVTYNALIKGICNEGRLDEVIRFLKNLPSY 324
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQ 266
G++P + ++ + + +AMK+ M K L + T+ +I+++C++G + +
Sbjct: 325 GYQPDVISYTIVLHSLSSGGRWTDAMKLLASMLCKGC-SLNVVTFNTLINFLCQKGLLGK 383
Query: 267 AYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK--VVEEIEKPDISLYHGLIKGL 324
A+ +LE + K ++++ + I G + Y +V PDI Y+ L+ L
Sbjct: 384 AFNVLEMIXKHVCTPNSISYNPSIGGFCNE---KSXYLEIMVSRGCYPDIVTYNILLAAL 440
Query: 325 LRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR-------------KGPDP- 370
+ R+ +A ++ +++ +G +P + TY +++ G L K G+ KG P
Sbjct: 441 CKDRKVDDAVEILKQLSFKGLKPDVITYSIIIDGLL-KVGKTDLALELLEEACTKGLKPN 499
Query: 371 LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
L+ F ++ VGG+ + GK +A K + G+ F YN
Sbjct: 500 LITFTSV-VGGISRKGKVHEAIKIFHFLEGLGIRPNAFAYN 539
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 95/190 (50%), Gaps = 15/190 (7%)
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVK 241
LI GYC G++ EA ++ + M+ P+ D ++ + K + M+V + +++K
Sbjct: 199 LIGGYCXSGEVEEALRVLDCMS---VSPNGINYDTILRSLCDRCKLKQGMEVLDRQLQIK 255
Query: 242 RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
D+ TY +ID CK ++ QA +L EM + + + +T +++I G+ GRL E
Sbjct: 256 CYPDV--VTYTELIDAACKDSRVGQAMKLLIEMVSKECKPNVVTYNALIKGICNEGRLDE 313
Query: 302 AYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL- 356
+ ++ + +PD+ Y ++ L R +A ++ M+ +GC + T+ L+
Sbjct: 314 VIRFLKNLPSYGYQPDVISYTIVLHSLSSGGRWTDAMKLLASMLCKGCSLNVVTFNTLIN 373
Query: 357 ----QGHLGK 362
+G LGK
Sbjct: 374 FLCQKGLLGK 383
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 11/134 (8%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHI 133
IT++ ++D + K DL E L+E + L N TF + ++ ++ + + FH
Sbjct: 466 ITYSIIIDGLLKVGKTDLALELLEEACTKGLKPNLITFTSVVGGISRKGKVHEAIKIFHF 525
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDL 193
+ G + N ++ LC+ + + S KP E Y L+KG G
Sbjct: 526 LEGLGIRPNAFAYNLIIMGLCKTQ----------QTSRGCKPTEATYNILVKGITSEGXP 575
Query: 194 IEASKIWNLMTDEG 207
EASK+W+ + +G
Sbjct: 576 KEASKLWSELYSKG 589
>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
Length = 629
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 128/259 (49%), Gaps = 11/259 (4%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT- 117
FF+ + P N++T++ +V + + N+ + E E D +++
Sbjct: 303 FFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISG 362
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPN 176
L + L+ + M + G + + N ++ C++K + EA L+ ++ E I+P+
Sbjct: 363 LTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPD 422
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
Y L+ G C GD ++ M D+G +PS+ ++ + K+ K DEA+++
Sbjct: 423 VCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRI-- 480
Query: 237 MMRVKRMDDLGLST----YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
++ MD+ G+ Y +ID++CKRG + A + +EM ++ + A+ T ++++ G
Sbjct: 481 ---LRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKG 537
Query: 293 LLARGRLREAYKVVEEIEK 311
L + +A+++++++ +
Sbjct: 538 LRDKNMPEKAFELMDQMRE 556
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 133/311 (42%), Gaps = 22/311 (7%)
Query: 146 LNKVVKTLCQRKLVVEAKYLI---LKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNL 202
LN VV LC+ V EA + + PN + Y LI +C VG++ A ++
Sbjct: 212 LNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEK 271
Query: 203 MTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS-TYRIVIDWMCKR 261
M +EG +I ++ ++ + + A++ F+ R + G + TY ++ +
Sbjct: 272 MENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHT 331
Query: 262 GKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLY 317
+ A + E G D + ++I GL GRL +A + ++ K D Y
Sbjct: 332 NNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAY 391
Query: 318 HGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------------LGKRGR 365
+ LI G R +R EA ++ +EM + G P + TY LL G LGK
Sbjct: 392 NILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMID 451
Query: 366 KGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVV 424
G P ++ F T+ V G K GK +A + + + G+ YN + + V
Sbjct: 452 DGCQPSVITFGTL-VHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVD 510
Query: 425 MFEEVGKKLRE 435
+ E+ +++E
Sbjct: 511 LAIELFDEMKE 521
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 125/284 (44%), Gaps = 32/284 (11%)
Query: 164 YLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT--DEGFEPSIDVVDKMIET 221
Y +++ ++P+ + YG L+ G C G + +A ++ + M+ D P + ++ +++
Sbjct: 159 YALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDG 218
Query: 222 FFKINKDDEAMK-VFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIE 280
K + EA+ V Q M TY +ID C+ G IS AY ++E+M G+
Sbjct: 219 LCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVP 278
Query: 281 ADNLTLSSIIYGLLARGRLREAYKVVEEIE------KPDISLYHGLIKGLLRLRRAREAT 334
+ +TL++I+ GL GR A + E K + Y L+ LL A
Sbjct: 279 QNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAM 338
Query: 335 QVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKY 394
++F E + +GH PD ++ F + GL +AG+ DA
Sbjct: 339 ELFHEKMS--------------EGH-------SPDAIMYF--TMISGLTQAGRLEDACSM 375
Query: 395 VERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
+ G ++ YN + + ++ + E+ ++++EVG+
Sbjct: 376 ASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGI 419
>gi|410109909|gb|AFV61034.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
viburnoides]
Length = 431
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 133/288 (46%), Gaps = 41/288 (14%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T + L L +++ K + F+ + +CG SL N ++ C+ + A+ + +
Sbjct: 109 TCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAI 168
Query: 170 SEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++W ++P+ ++Y L+ GY +GDL E ++ + M G +P + +I K +K
Sbjct: 169 TKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKX 228
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
D+A ++F M VK + + +ID CK G++ A + ++M + + D +T ++
Sbjct: 229 DDANELFDEMLVKGLVP-NXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 287
Query: 289 IIYGLLARGRLREAYKVVEEIE----KP-------------------------------- 312
+IYGL +G L++A+ +++E+ KP
Sbjct: 288 LIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDXAFEHXKRMIQEN 347
Query: 313 ---DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
D Y LI GL R+ +A ++ REM+ G +P TY M++
Sbjct: 348 XRLDXVXYTALISGLCXEGRSVDAEKMLREMLSVGLKPDARTYTMIIN 395
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N ++ LC++ + +A +LI ++S + +KP++I Y LI G C GDL A + M
Sbjct: 286 NTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDXAFEHXKRMIQ 345
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
E +I + +A K+ +M+ V D TY ++I+ CK+G +
Sbjct: 346 ENXRLDXVXYTALISGLCXEGRSVDAEKMLREMLSVGLKPDA--RTYTMIINEFCKKGDV 403
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
+ +L+EM + D S + Y +L G
Sbjct: 404 WKGSKLLKEM-----QRDGHVPSVVTYNVLMNG 431
>gi|410109875|gb|AFV61017.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
herrerae]
Length = 395
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 133/280 (47%), Gaps = 41/280 (14%)
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPN 176
L +++ K + F+ + +CG SL N ++ C+ + A+ + +++W ++P+
Sbjct: 98 LMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPS 157
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
+++ L+ GY +GDL E ++ N M G +P + +I K +K D+A ++F
Sbjct: 158 VVSFNTLMNGYIRLGDLDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANELFD 217
Query: 237 MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR 296
M K + G+ T+ +ID CK G++ A + ++M + + D +T +++ YGL +
Sbjct: 218 EMLDKGLVPNGV-TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLTYGLCKK 276
Query: 297 GRLREAYKVVEEIE----KPDI-----------------------------------SLY 317
G L++A+ +++E+ KPD +Y
Sbjct: 277 GDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVY 336
Query: 318 HGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
LI GL + R+ +A ++ REM+ G +P TY M++
Sbjct: 337 TALISGLCQEGRSVDAEKMLREMLSVGLKPNXGTYTMIIN 376
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 90/202 (44%), Gaps = 5/202 (2%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHIM 134
T++ +++ + K +D E EM + LV N TF + + + + + M
Sbjct: 195 TYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 254
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDL 193
L N + LC++ + +A LI ++S + +KP++I Y LI G C GD+
Sbjct: 255 LSQSLSPDLITYNTLTYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDM 314
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLSTYR 252
A + M E V +I + + +A K+ +M+ V + G TY
Sbjct: 315 ETAFEHQKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLKPNXG--TYT 372
Query: 253 IVIDWMCKRGKISQAYTMLEEM 274
++I+ CK+G + +L+EM
Sbjct: 373 MIINEFCKKGDVWTGSKLLKEM 394
>gi|297807861|ref|XP_002871814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317651|gb|EFH48073.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 459
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 165/370 (44%), Gaps = 13/370 (3%)
Query: 29 SLSSCNFNLTHEFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSITFNRMVDIIGKSR 88
SL+S +T EF ++ S FF + ++ P + S+ + + + +
Sbjct: 67 SLNSLRLPVTSEFVFRVLRATSRSANDSLRFFNWA-RSNPSYTPTSMEYEELAKSLASHK 125
Query: 89 NIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFH-IMNDCGCEYSLEML 146
+ W+ L++M L ++ +T + + + + V F+ + GC+ ++++
Sbjct: 126 KYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVY 185
Query: 147 NKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N ++ LC K+ A LI ++ + +KP++ Y L+ G+C G + EA + + M+
Sbjct: 186 NALLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSR 245
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
+GF P D +IE + A ++ +M + + D + T+ +I+ + K G++
Sbjct: 246 KGFNPPARGRDLLIEGLLNAGYLESAKEIVDKMTKGGFVPD--ILTFNTLIEAISKSGEV 303
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV----VEEIEKPDISLYHGL 320
M K G+ D T ++I + G++ EA+++ VE+ KP SLY +
Sbjct: 304 EFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPI 363
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVG 380
IKG+ R +A F +M + P Y ML+ + RG K D +
Sbjct: 364 IKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLIT--MCGRGGKFVDAANYLVEMTEM 421
Query: 381 GLVKAGKSLD 390
GLV + D
Sbjct: 422 GLVPISRCFD 431
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 74/173 (42%), Gaps = 18/173 (10%)
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y + + K + +L++M ++ TL II G + +A ++ +
Sbjct: 114 YEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVP 173
Query: 311 KP-----DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG------- 358
K + +Y+ L+ L ++ A + R MI++G +P TY +L+ G
Sbjct: 174 KTLGCQQTVDVYNALLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKM 233
Query: 359 -----HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP 406
L + RKG +P + + GL+ AG L++AK + M +G VP
Sbjct: 234 KEAQEFLDEMSRKGFNPPARGRDLLIEGLLNAGY-LESAKEIVDKMTKGGFVP 285
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 160/361 (44%), Gaps = 33/361 (9%)
Query: 96 TLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLC 154
+EM R+ ++ D TF + + +L + ++K+ + F M G + N ++
Sbjct: 311 VFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYA 370
Query: 155 QRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSID 213
+ +V+ L L L + I P + LIK Y + G L +A I+N M D G +P++
Sbjct: 371 TKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVL 430
Query: 214 VVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAYT 269
+I +I K D+AM+ F +M D G++ Y +I C G + +A
Sbjct: 431 TYTTVIAALCRIGKMDDAMEKFN-----QMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKE 485
Query: 270 MLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLL 325
++ E+ G+ D + SSII L GR+ +A + + P +Y L+ G
Sbjct: 486 LISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYC 545
Query: 326 RLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR-------------KGPDPLV 372
+ + +A +VF M+ G EP Y L+ G+ K GR KG P
Sbjct: 546 LVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYC-KIGRIDEGLSLFREMLQKGIKPST 604
Query: 373 NFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLH-YYSN---EEGVVMFEE 428
I + GL +AG+++ A + G+ + + Y+ L + N +E + +F+E
Sbjct: 605 ILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKE 664
Query: 429 V 429
+
Sbjct: 665 L 665
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 123/241 (51%), Gaps = 9/241 (3%)
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIK--PNEIAYGWLIKGY 187
FF + G + + N ++K C+ K EA ++L + + P+ +Y L+K
Sbjct: 133 FFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSL 192
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVV--DKMIETFFKINKDDEAMKVFQMMRVKRMDD 245
CD G +A + +M + G S DVV + +I+ FFK ++A +F+ M V+R
Sbjct: 193 CDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEM-VQRGIP 251
Query: 246 LGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
TY V+ +CK + +A L +M +G+ +N T +++IYG + G+ +EA +V
Sbjct: 252 PDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRV 311
Query: 306 VEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG 361
+E+ + PD+ ++ L+ L + + +EA VF M +G P + +Y ++L G+
Sbjct: 312 FKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYAT 371
Query: 362 K 362
K
Sbjct: 372 K 372
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 142/293 (48%), Gaps = 13/293 (4%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALM----TLAEVRELKKMV 128
N +T+ ++ + + +D E +M + + DK L+ T + + K+++
Sbjct: 428 NVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELI 487
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGY 187
+ IMN+ G + + + ++ LC+ V++A+ + L ++ + P + Y L+ GY
Sbjct: 488 S--EIMNN-GMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGY 544
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C VG + +A ++++ M G EP+ V ++ + KI + DE + +F+ M K +
Sbjct: 545 CLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPST 604
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
+ Y I+ID + + G+ A EM + GI + T S ++ GL EA + +
Sbjct: 605 I-LYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFK 663
Query: 308 EIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
E+ K DI + +I G+ + RR EA +F + + G P + TY +++
Sbjct: 664 ELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMI 716
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 95/234 (40%), Gaps = 64/234 (27%)
Query: 207 GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG----LSTYRIVIDWMCKRG 262
G I + + +++ F + + DEA+ + + R +LG + +Y I++ +C +G
Sbjct: 141 GLRVDIIIANHLLKGFCEAKRTDEALDIL----LHRTPELGCVPDVFSYSILLKSLCDQG 196
Query: 263 KISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISLYHGLIK 322
K QA +L M + G + PD+ Y+ +I
Sbjct: 197 KSGQADDLLRMMAEGG-----------------------------AVCSPDVVAYNTVID 227
Query: 323 GLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGL 382
G + +A +F+EM++RG P TY + V L
Sbjct: 228 GFFKEGDVNKACDLFKEMVQRGIPPDFVTY-----------------------SSVVHAL 264
Query: 383 VKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN----EEGVVMFEEVGKK 432
KA A ++ +++N+GV + YN ++ YS+ +E V +F+E+ ++
Sbjct: 265 CKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQ 318
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 94/233 (40%), Gaps = 35/233 (15%)
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIA 179
V +++K + F M G E + + +V C+ + E L + L + IKP+ I
Sbjct: 547 VGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTIL 606
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM------- 232
Y +I G + G + A ++ MT+ G + ++ FK DEA+
Sbjct: 607 YNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELR 666
Query: 233 ----------------KVFQMMRVKRMDDLGLS-----------TYRIVIDWMCKRGKIS 265
+FQ RV+ DL S TY I+I + K G +
Sbjct: 667 AMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVE 726
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISLYH 318
+A M M G E D+ L+ ++ LL + + A + +I++ + SL H
Sbjct: 727 EAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEH 779
>gi|125538899|gb|EAY85294.1| hypothetical protein OsI_06665 [Oryza sativa Indica Group]
Length = 632
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 142/311 (45%), Gaps = 15/311 (4%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL--VNDKTFKIALM 116
FF++ K + + H++ T+ ++ + W+ +QEM R + V +
Sbjct: 109 FFRWAAKKRN-YQHDTSTYMALIHCLELVEQYGEMWKMIQEMVRSPICVVTPMELSQVIR 167
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE--WIK 174
L + + K + F+ + C+ + + N ++ L + L ++S +
Sbjct: 168 MLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCQ 227
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+ + Y LI +C +G A ++ N M + G +P+ + +I FFK++ A+ +
Sbjct: 228 PDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSL 287
Query: 235 FQMMRVK--RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
F+ MR R D + TY +I + K G+I +AY EM + G + D + ++++I
Sbjct: 288 FEEMRYMYCRPD---VFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINF 344
Query: 293 LLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLR-RAREATQVFREMIKRGCEP 347
L GRL + K+ EE+ P++ Y+ +IK L + R E F M G P
Sbjct: 345 LGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISP 404
Query: 348 TMHTYIMLLQG 358
+ TY +L+ G
Sbjct: 405 SPFTYSILIDG 415
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 132/316 (41%), Gaps = 54/316 (17%)
Query: 172 WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEA 231
+ +P+ Y LI+G G + EA ++ M EG +P V++ MI K + D+
Sbjct: 295 YCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLDDG 354
Query: 232 MKVFQMMRV-------------------------------KRMDDLGLS----TYRIVID 256
+K+F+ M V +RM G+S TY I+ID
Sbjct: 355 LKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILID 414
Query: 257 WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----P 312
CK +I +A +LEEM ++G S+I L R A ++ +E+++
Sbjct: 415 GFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSS 474
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG------------HL 360
+Y +IK L + R +A +F EM K GC P ++ Y L+ G +
Sbjct: 475 SARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTM 534
Query: 361 GKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE 420
K G P +N I + GL K G A + + + N ++ YN L S+
Sbjct: 535 RKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSH- 593
Query: 421 EGVVMFEEVGKKLREV 436
MFEE + ++E+
Sbjct: 594 --AGMFEEAAELMKEM 607
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/338 (20%), Positives = 131/338 (38%), Gaps = 62/338 (18%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVNFFHIM 134
T+ ++ +GK+ ID + EM R D ++ L + L + F M
Sbjct: 302 TYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLDDGLKLFEEM 361
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW--------IKPNEIAYGWLIKG 186
C ++ N ++K L E+K + ++ W I P+ Y LI G
Sbjct: 362 GVSHCIPNVVTYNTIIKAL------FESKSRVSEVFSWFERMKGSGISPSPFTYSILIDG 415
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
+C + +A + M ++GF P +I+ K + D A ++FQ ++ ++
Sbjct: 416 FCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELK----ENC 471
Query: 247 GLST---YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
G S+ Y ++I + K G++ A + +EM K G + ++++ GL L EA
Sbjct: 472 GSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEAL 531
Query: 304 KVVEEIE---------------------------------------KPDISLYHGLIKGL 324
+ +++ KPD Y+ ++ L
Sbjct: 532 TTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSAL 591
Query: 325 LRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
EA ++ +EM G E + TY +L+ +GK
Sbjct: 592 SHAGMFEEAAELMKEMNALGFEYDLITYSSILEA-IGK 628
>gi|413917024|gb|AFW56956.1| hypothetical protein ZEAMMB73_276172 [Zea mays]
Length = 666
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 110/464 (23%), Positives = 194/464 (41%), Gaps = 54/464 (11%)
Query: 6 GHLVRVCTILYQQQYSPESRLHSSLSSCNFNLTHEFFLQIC--NNFPLSWRPVYLFFQYT 63
GHL + C + Y+ + + +S + T E F +C P W +L +
Sbjct: 139 GHLSKTCATSHILSYAVNCLIKAYTNSHDVQETVEMFCHLCRLGFVPTLWACSFLIKFVS 198
Query: 64 QKAQPCF---AHNSI-TFNRMVDI------------IGKSRNIDLFWETLQEMGRRRLVN 107
Q A++ + F M+D + K+ W + EMG + +
Sbjct: 199 QSGDSDMVVRAYDQMKCFQLMLDTQSLNIVIRSFFEVNKAEESFQVWVRMIEMGMKPDAH 258
Query: 108 D-KTFKIALMTLAEVRELKKMVNFFHIMNDCGCE-YSLEML--NKVVKTLCQRKLVVEA- 162
+F I L + MV+ + ++++ E ++E + N V+ LC+ + EA
Sbjct: 259 GYSSFIIGLCDCGKYDLAYNMVSKYTVLHEITQERVAIESIAYNMVIDGLCKEMKLEEAE 318
Query: 163 KYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNL---MTDEGFEPSIDVVDKMI 219
K L +K P+ Y +LI+ YC +G+L K+W+ M G E + +V ++
Sbjct: 319 KVLDIKTRHGSTPDLYGYSYLIRSYCKMGNL---EKVWHYIEAMVSHGIEINCYIVGYLL 375
Query: 220 ETFFKINKDDEAMKVFQMMRVKRMDDLGLST----YRIVIDWMCKRGKISQAYTMLEEMF 275
+ K+ E + FQ R DLGL Y I +D CK G +++A +L EM
Sbjct: 376 QCLKKLGMISEVIVHFQKFR-----DLGLHLDGVLYNIAMDAYCKLGNMNEAVKLLTEMM 430
Query: 276 KRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAR 331
G+ D + + +I G +G + A++V E++ KPD+ Y+ L G R
Sbjct: 431 AGGLVPDKIHYTCLINGYCLKGEMENAWQVFEQMLKENVKPDVVTYNILASGYSRNGTVI 490
Query: 332 EATQVFREMIKRGCEPTMHTYIMLLQ-----GHLGKR-------GRKGPDPLVNFDTIFV 379
+ + M+ +G EP TY + + G+L + KG D + + V
Sbjct: 491 KVYDLLEHMMNQGLEPNSLTYGVAITSFCRGGNLSEAEVLFNIVEEKGIDNIELLYSSMV 550
Query: 380 GGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGV 423
G + +G + A RV +G V +F +K ++ +E V
Sbjct: 551 CGYLHSGWTDHAHALFLRVAKQGNMVDQFSCSKLINGLCIDEKV 594
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 120/309 (38%), Gaps = 41/309 (13%)
Query: 144 EMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVG------DLIEA 196
+ LN V+++ + E+ + +++ E +KP+ Y I G CD G +++
Sbjct: 223 QSLNIVIRSFFEVNKAEESFQVWVRMIEMGMKPDAHGYSSFIIGLCDCGKYDLAYNMVSK 282
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVID 256
+ + +T E + +I+ K K +EA KV + + + L Y +I
Sbjct: 283 YTVLHEITQERVAIESIAYNMVIDGLCKEMKLEEAEKVLDI-KTRHGSTPDLYGYSYLIR 341
Query: 257 WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----- 311
CK G + + + +E M GIE + + ++ L G + E V+ +K
Sbjct: 342 SYCKMGNLEKVWHYIEAMVSHGIEINCYIVGYLLQCLKKLGMISE---VIVHFQKFRDLG 398
Query: 312 --PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPD 369
D LY+ + +L EA ++ EM+ G P Y L+ G+ K
Sbjct: 399 LHLDGVLYNIAMDAYCKLGNMNEAVKLLTEMMAGGLVPDKIHYTCLINGYCLK------- 451
Query: 370 PLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEV 429
G+ +A + E+++ V+ YN YS V+ ++
Sbjct: 452 ----------------GEMENAWQVFEQMLKENVKPDVVTYNILASGYSRNGTVIKVYDL 495
Query: 430 GKKLREVGL 438
+ + GL
Sbjct: 496 LEHMMNQGL 504
>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62914, mitochondrial; Flags: Precursor
gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats. EST gb|AA728420 comes from this gene
[Arabidopsis thaliana]
gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 528
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 130/291 (44%), Gaps = 18/291 (6%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEA 196
GC+ L VV LC+R A L+ K+ + I+ N + Y +I C +A
Sbjct: 213 GCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDA 272
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVID 256
++ M ++G P++ +I + +A ++ M ++R + L T+ +ID
Sbjct: 273 LNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDM-IERKINPNLVTFSALID 331
Query: 257 WMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----P 312
K+GK+ +A + EEM KR I+ + T SS+I G RL EA +++E + + P
Sbjct: 332 AFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLP 391
Query: 313 DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG-------- 364
++ Y+ LI G + +R + ++FREM +RG TY L+ G R
Sbjct: 392 NVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 451
Query: 365 ----RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYN 411
G P + I + GL K GK A E + +E + YN
Sbjct: 452 KQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYN 502
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 139/291 (47%), Gaps = 9/291 (3%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFFHI 133
+T+ +V+ + K + DL L +M ++ N + + +L + R +N F
Sbjct: 219 VTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTE 278
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGD 192
M + G ++ + ++ LC +A L+ + E I PN + + LI + G
Sbjct: 279 MENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGK 338
Query: 193 LIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL-GLSTY 251
L++A K++ M +P+I +I F +++ EA ++ ++M R D L + TY
Sbjct: 339 LVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELM--IRKDCLPNVVTY 396
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK 311
+I+ CK ++ + + EM +RG+ + +T +++I+G A V +++
Sbjct: 397 NTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 456
Query: 312 ----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
P+I Y+ L+ GL + + +A VF + + EP ++TY ++++G
Sbjct: 457 VGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEG 507
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 142/326 (43%), Gaps = 35/326 (10%)
Query: 111 FKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS 170
F L +A++ + +++F M G ++L N ++ C+ + A L+ K+
Sbjct: 81 FSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMM 140
Query: 171 EW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD 229
+ +P+ + L+ G+C + +A + + M + G++P +I F NK
Sbjct: 141 KLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKAS 200
Query: 230 EAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSI 289
EA+ + M V+R L TY V++ +CKRG A +L +M IEA+ + S++
Sbjct: 201 EAVALIDRM-VQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTV 259
Query: 290 IYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGC 345
I L +A + E+E +P++ Y LI L R +A+++ +MI+R
Sbjct: 260 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKI 319
Query: 346 EPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEV 405
P + T+ + + VK GK + A K E ++ R ++
Sbjct: 320 NPNLVTF-----------------------SALIDAFVKKGKLVKAEKLYEEMIKRSIDP 356
Query: 406 PRFDYNKFLHYYSNEEGVVMFEEVGK 431
F Y+ ++ G M + +G+
Sbjct: 357 NIFTYSSLIN------GFCMLDRLGE 376
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 141/312 (45%), Gaps = 40/312 (12%)
Query: 186 GYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDD 245
G D+ +L +A ++ +M PSI K++ K+NK D + + M +
Sbjct: 53 GLSDI-ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEI----- 106
Query: 246 LGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
LG+S TY I+I+ C+ ++S A +L +M K G E D +TL+S++ G R+ +
Sbjct: 107 LGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISD 166
Query: 302 AYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
A +V+++ KPD + LI GL +A EA + M++RGC+P + TY ++
Sbjct: 167 AVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVN 226
Query: 358 GHLGKRG--------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
G L KRG K +V + T+ + L K DA + N+GV
Sbjct: 227 G-LCKRGDTDLALNLLNKMEAAKIEANVVIYSTV-IDSLCKYRHEDDALNLFTEMENKGV 284
Query: 404 EVPRFDYNKFLHYYSN-----EEGVVMFEEVGKKLRE--VGLADLADIFQRYGKKMATR- 455
Y+ + N + ++ + + +K+ V + L D F + GK +
Sbjct: 285 RPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEK 344
Query: 456 --ERRRNRAIEP 465
E R+I+P
Sbjct: 345 LYEEMIKRSIDP 356
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 76/154 (49%), Gaps = 4/154 (2%)
Query: 147 NKVVKTLCQRKLVVEAKYLI-LKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
+ ++ C + EAK ++ L + + PN + Y LI G+C + + +++ M+
Sbjct: 362 SSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQ 421
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLSTYRIVIDWMCKRGKI 264
G + +I FF+ D A VF QM+ V ++ TY I++D +CK GK+
Sbjct: 422 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNI--LTYNILLDGLCKNGKL 479
Query: 265 SQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR 298
++A + E + + +E D T + +I G+ G+
Sbjct: 480 AKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
>gi|297800058|ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313749|gb|EFH44172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 724
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 106/440 (24%), Positives = 183/440 (41%), Gaps = 88/440 (20%)
Query: 97 LQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSL------------ 143
L M +R + D T + L L E + + + +F M D G + +L
Sbjct: 263 LSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCK 322
Query: 144 --------EMLNKVVKT---------------LCQRKLVVEAKYLILKL--SEWIKPNEI 178
EML ++V+ LC+R +A L LKL S+ KPN
Sbjct: 323 KGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDIYKPNVH 382
Query: 179 AYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM 238
Y +I GYC L A +++ M ++G P+++ +I K D A ++ +
Sbjct: 383 TYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRAYELMNL- 441
Query: 239 RVKRMDDLG----LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
MDD G + TY VID +CK+ + +AY +L + F G+EAD +T + +I
Sbjct: 442 ----MDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQC 497
Query: 295 ARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
+ +++A + K D+ L + LI R ++ +E+ ++F+ ++ G PT
Sbjct: 498 KQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLVPTKE 557
Query: 351 TYIMLLQG--------------HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVE 396
TY ++ G H KR PD + GL K +A K E
Sbjct: 558 TYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGS--LISGLCKKSMVDEACKLYE 615
Query: 397 RVMNRGVEVPRFDYNKFLHYY----SNEEGVVMFEEVGKKL---------------REVG 437
+++RG+ P + Y + +++ E + KKL ++VG
Sbjct: 616 AMIDRGLSPPEVTRVTLAYEYCKRNDSASAMIVLEPLDKKLWIRTVRTLVRKLCSEKKVG 675
Query: 438 LADLADIFQRYGKKMATRER 457
+A L FQ+ +K ++ +R
Sbjct: 676 VAAL--FFQKLLEKDSSADR 693
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 121/255 (47%), Gaps = 15/255 (5%)
Query: 115 LMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWI 173
L +E+ L + V M + G S +N V++ + L+ A+ + ++S +
Sbjct: 177 LRNFSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGV 236
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
P+ ++ ++ G G + EA + + M GF P ++ + + A+
Sbjct: 237 CPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIW 296
Query: 234 VFQMMRVKRMDDLG----LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSI 289
F ++M DLG L + +ID +CK+G I QA+ MLEEM + G + + T +++
Sbjct: 297 YF-----RKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTAL 351
Query: 290 IYGLLARGRLREAYK-----VVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRG 344
I GL RG +A++ V +I KP++ Y +I G + + A +F M ++G
Sbjct: 352 IDGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQG 411
Query: 345 CEPTMHTYIMLLQGH 359
P ++TY L+ GH
Sbjct: 412 LFPNVNTYTTLINGH 426
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 119/245 (48%), Gaps = 14/245 (5%)
Query: 124 LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAK-YLILKLSEWIKPNEIAYGW 182
++ + +M D G + N V+ C+ + E K YL+ +++ +KPN YG
Sbjct: 493 FEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGA 552
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
I GYC G++ A + + M D G P+ + +I+ + KD K F R
Sbjct: 553 FIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYC---KDGNTTKAFAKFRC-- 607
Query: 243 MDDLG----LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR 298
M D G + T+ ++I + K GK+ +A + E+ +G+ D T +S+I L G
Sbjct: 608 MLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGD 667
Query: 299 LREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIM 354
L+ A+++ +++ K P+I Y+ LI GL +L +A ++F + ++G TY
Sbjct: 668 LKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYST 727
Query: 355 LLQGH 359
++ G+
Sbjct: 728 IIAGY 732
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 106/193 (54%), Gaps = 9/193 (4%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
IK N Y LI G C +GDL +A +++ MT G +P I + +IE ++K+ ++A
Sbjct: 368 IKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAY 427
Query: 233 KVFQMMRVKRMDDLGLSTYRI--VIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
++ ++ +K+ ++L + Y +++ +C G +++A + +EM G++ + + ++I+
Sbjct: 428 EL--LIEIKK-ENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIV 484
Query: 291 YGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
GL+ GR EA K++ ++ PD+ Y+ +I G + + E EMI +G +
Sbjct: 485 KGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLK 544
Query: 347 PTMHTYIMLLQGH 359
P ++TY + G+
Sbjct: 545 PNVYTYGAFIHGY 557
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 126/291 (43%), Gaps = 20/291 (6%)
Query: 145 MLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLM 203
M +V LC + A L ++ W +KPN + Y ++KG G EA KI +M
Sbjct: 444 MCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVM 503
Query: 204 TDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGK 263
D+G P + + +I F K K +E M K + + TY I C+ G+
Sbjct: 504 KDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKP-NVYTYGAFIHGYCRAGE 562
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK----VVEEIEKPDISLYHG 319
+ A EM GI +++ + +I G G +A+ ++++ PD+ +
Sbjct: 563 MQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSV 622
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG-------------RK 366
LI GL + + +EA VF E++ +G P + TY L+ +L K G +K
Sbjct: 623 LIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLIS-NLCKEGDLKAAFELHDDMCKK 681
Query: 367 GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
G +P + + GL K G+ A + + + +G+ Y+ + Y
Sbjct: 682 GINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGY 732
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 158/367 (43%), Gaps = 38/367 (10%)
Query: 97 LQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQ 155
E+ + LV D T+ + L + +LK M G ++ N ++ LC+
Sbjct: 640 FSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCK 699
Query: 156 RKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDV 214
+ +A+ L + E + N + Y +I GYC +L EA ++++ M G P V
Sbjct: 700 LGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFV 759
Query: 215 VDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEM 274
+I+ K ++A+ +F M + + + +ID K GK+ +AY ++E+M
Sbjct: 760 YCALIDGCCKAGNTEKALSLFLGMVEEGIAST--PAFNALIDGFFKLGKLIEAYQLVEDM 817
Query: 275 FKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRA 330
I +++T + +I G ++EA ++ E++K P++ Y L+ G R+ R
Sbjct: 818 VDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRR 877
Query: 331 REATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLD 390
E +F EM+ RG +P + +++ HL K G +
Sbjct: 878 SEMFSLFDEMVARGIKPDDLAWSVMVDAHL-----------------------KEGNWIK 914
Query: 391 AAKYVERVMNRGVEVPRFDY----NKFLHYYSNEEGVVMFEEV---GKKLREVGLADLAD 443
A K V+ +++ GV V + Y + + + E + + +EV G KL L
Sbjct: 915 ALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVC 974
Query: 444 IFQRYGK 450
F R G+
Sbjct: 975 CFHRAGR 981
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 100/193 (51%), Gaps = 9/193 (4%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
I P+ Y LI YC VG + E + M ++G P++ +I + DEA+
Sbjct: 228 IVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEAL 287
Query: 233 KVFQMMRVKRM--DDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
++ + M K + D+ Y +ID C++ + ++ +ML+EM+ G++ D++ +++I
Sbjct: 288 ELKRSMANKGLLPDNY---IYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALI 344
Query: 291 YGLLARGRLREAYKVVEEIEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCE 346
G + + + A++V EE+ I L Y+ LI GL ++ +A +F EM G +
Sbjct: 345 NGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIK 404
Query: 347 PTMHTYIMLLQGH 359
P + TY L++G+
Sbjct: 405 PDIQTYNCLIEGY 417
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 129/287 (44%), Gaps = 12/287 (4%)
Query: 73 NSITFNRMVDIIGKSRNI----DLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMV 128
N +T+N +++ + K I +LF + + E G R N T+ + + L +
Sbjct: 686 NIVTYNALINGLCKLGEIAKARELF-DGIPEKGLAR--NSVTYSTIIAGYCKSANLTEAF 742
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYC 188
FH M G + ++ C+ +A L L + E + A+ LI G+
Sbjct: 743 QLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPAFNALIDGFF 802
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
+G LIEA ++ M D P+ +IE + EA ++F M+ KR +
Sbjct: 803 KLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQ-KRNVMPNV 861
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY ++ + G+ S+ +++ +EM RGI+ D+L S ++ L G +A K+V++
Sbjct: 862 LTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDD 921
Query: 309 IEKPDI----SLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
+ + +LY LI L + E +V E+ K+G + ++ T
Sbjct: 922 MLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLAT 968
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 119/283 (42%), Gaps = 37/283 (13%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMV 128
A NS+T++ ++ KS N+ ++ M + D AL+ + +K +
Sbjct: 718 LARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKAL 777
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGY 187
+ F M + G S N ++ + ++EA L+ + + I PN + Y LI+ +
Sbjct: 778 SLFLGMVEEGIA-STPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYH 836
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMM--RVKRMDD 245
C VG++ EA +++ M P++ ++ + +I + E +F M R + DD
Sbjct: 837 CTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDD 896
Query: 246 LGLST--------------------------------YRIVIDWMCKRGKISQAYTMLEE 273
L S Y I+ID +CK +S+ +L+E
Sbjct: 897 LAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDE 956
Query: 274 MFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDISL 316
+ K+G + T +++ GR EA +V+E + + ++L
Sbjct: 957 VEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESMVRSFLNL 999
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 99/253 (39%), Gaps = 53/253 (20%)
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C+ G A+ + M D P + ++D +I+ + +IN + V
Sbjct: 118 CNSGLFGNAANVLERMIDTR-NPHVKILDSIIKCYKEINGSSSSSSV------------- 163
Query: 248 LSTYRIVIDWMCKRGKISQAYTML----EEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
+ I+ID K+G +++A ++ F G+ N S+ LL R+ +
Sbjct: 164 -VVFEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCN----SLSKDLLKGNRVELFW 218
Query: 304 KVVEEIEK---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL 360
KV + + PD+ Y LI R+ + E V +M ++GC P + TY
Sbjct: 219 KVYKGMLGAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTY-------- 270
Query: 361 GKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE 420
++ + GL +AG +A + + N+G+ + Y + + +
Sbjct: 271 ---------------SVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQ 315
Query: 421 ----EGVVMFEEV 429
EG M +E+
Sbjct: 316 KRSTEGKSMLDEM 328
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 164/390 (42%), Gaps = 60/390 (15%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVNFF 131
NSI +++ + +S D W+ L + + V + AL+T L RE K+M
Sbjct: 269 NSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRM---- 324
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVG 191
L+ E K + I+PN + +G LI C
Sbjct: 325 ------------------------NTLLAEMKEMD------IQPNVVTFGILINHLCKFR 354
Query: 192 DLIEASKIWNLMT---DEGF--EPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
+ EA +++ M GF EP + + +I+ K+ + +E + + + MR +
Sbjct: 355 RVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMP 414
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
TY +ID CK I A + ++M K G+ + +TL++++ G+ GR+ A +
Sbjct: 415 NTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFF 474
Query: 307 EEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG--HL 360
E++ K + Y LI+ + +A ++F EM++ GC P Y L+ G
Sbjct: 475 NEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQA 534
Query: 361 GKRGRK------------GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRF 408
GK R PD +V+F+ + + G + K +A + ++ + N G++
Sbjct: 535 GKLDRASFVLSKMKEAGFSPD-IVSFN-VLINGFCRKNKLDEAYEMLKEMENAGIKPDGV 592
Query: 409 DYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
YN + ++S + KK+ + GL
Sbjct: 593 TYNTLISHFSKTGDFSTAHRLMKKMVKEGL 622
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 138/301 (45%), Gaps = 8/301 (2%)
Query: 65 KAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRE 123
++QP N++T+N ++D K+ I+ E +M + + N T + + +
Sbjct: 407 RSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGR 466
Query: 124 LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGW 182
+ V FF+ M G + + +++ C + +A L ++ E P+ I Y
Sbjct: 467 INGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYT 526
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
LI G G L AS + + M + GF P I + +I F + NK DEA ++ + M
Sbjct: 527 LISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAG 586
Query: 243 MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
+ G+ TY +I K G S A+ ++++M K G+ +T ++I+ G L EA
Sbjct: 587 IKPDGV-TYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEA 645
Query: 303 YKVVEEIEK-----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
K+ ++ P+ +Y+ LI L R + A + +M +G +P +T+ + +
Sbjct: 646 MKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFK 705
Query: 358 G 358
G
Sbjct: 706 G 706
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 110/222 (49%), Gaps = 14/222 (6%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
N ++ C+ ++ A+ L +++ + + PN + L+ G C G + A + +N M
Sbjct: 420 NCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQG 479
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKR 261
+G + + +I F +N ++AM++F M + G S Y +I + +
Sbjct: 480 KGLKGNAVTYTALIRAFCNVNNIEKAMELFD-----EMLEAGCSPDAIVYYTLISGLSQA 534
Query: 262 GKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLY 317
GK+ +A +L +M + G D ++ + +I G + +L EAY++++E+E KPD Y
Sbjct: 535 GKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTY 594
Query: 318 HGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
+ LI + A ++ ++M+K G PT+ TY L+ +
Sbjct: 595 NTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAY 636
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 130/277 (46%), Gaps = 16/277 (5%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGR--RRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
IT+N ++D + K + ++ M R + N T+ + + ++ F
Sbjct: 381 ITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFD 440
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVG 191
MN G ++ LN +V +C+ + A ++ + +K N + Y LI+ +C+V
Sbjct: 441 QMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVN 500
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS-- 249
++ +A ++++ M + G P V +I + K D A V + +M + G S
Sbjct: 501 NIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFV-----LSKMKEAGFSPD 555
Query: 250 --TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
++ ++I+ C++ K+ +AY ML+EM GI+ D +T +++I G A+++++
Sbjct: 556 IVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMK 615
Query: 308 EIEK----PDISLYHGLIKGLLRLRRAREATQVFREM 340
++ K P + Y LI EA ++FR+M
Sbjct: 616 KMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDM 652
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 112/240 (46%), Gaps = 4/240 (1%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVNFF 131
N++T+ ++ NI+ E EM D L++ L++ +L +
Sbjct: 485 NAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVL 544
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE--WIKPNEIAYGWLIKGYCD 189
M + G + N ++ C++ + EA Y +LK E IKP+ + Y LI +
Sbjct: 545 SKMKEAGFSPDIVSFNVLINGFCRKNKLDEA-YEMLKEMENAGIKPDGVTYNTLISHFSK 603
Query: 190 VGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS 249
GD A ++ M EG P++ +I + DEAMK+F+ M
Sbjct: 604 TGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTV 663
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
Y I+I+ +C++ ++ A +++++M +G++ + T +++ GL + L +A+++++ +
Sbjct: 664 IYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRM 723
>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
Length = 671
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 142/318 (44%), Gaps = 33/318 (10%)
Query: 60 FQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLA 119
F + QP +++ FN+++ I K ++ +M +F I
Sbjct: 49 FNRMLRMQP--PPSTVDFNKLLTSIAKMKHHSTLLSLSHQM--------DSFGIP----P 94
Query: 120 EVRELKKMVNFFHIMNDCGCEYSL-------------EMLNKVVKTLCQRKLVVEAKYLI 166
+ L ++N F +N G +S+ +++ +C + EA +L
Sbjct: 95 NIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLF 154
Query: 167 LKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI 225
K+ E +P+ + YG LI G C VG+ A ++ M + +P++ + +I++ K
Sbjct: 155 DKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKD 214
Query: 226 NKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLT 285
+ EA +F M K + + TY +I +C + T+L EM I D ++
Sbjct: 215 RQVTEAFNLFSEMVTKGISP-DIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVS 273
Query: 286 LSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRAREATQVFREMI 341
++++ L G++ EA+ VV+++ +P++ Y L+ G L EA +VF M+
Sbjct: 274 FNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMV 333
Query: 342 KRGCEPTMHTYIMLLQGH 359
+GC P + +Y L+ G+
Sbjct: 334 CKGCMPNVISYNTLINGY 351
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/392 (21%), Positives = 172/392 (43%), Gaps = 44/392 (11%)
Query: 64 QKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVR 122
+ QP N +N ++D + K R + + EM + + D T+ + L +
Sbjct: 195 KNCQP----NVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLC 250
Query: 123 ELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYG 181
E K + + M D + N VV LC+ V EA ++ K+ + ++PN + Y
Sbjct: 251 EWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYT 310
Query: 182 WLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVK 241
L+ G+C + ++ EA K+++ M +G P++ + +I + KI + D+A+
Sbjct: 311 ALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIH-------- 362
Query: 242 RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
Y ++D C + +A + + M +G + ++ +++I G R+ +
Sbjct: 363 ---------YTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDK 413
Query: 302 AYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
A + E+ + PD Y LI GL + R ++A +F EM+ P + TY +LL
Sbjct: 414 AMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLD 473
Query: 358 GHLGK-----------RGRKGP--DPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVE 404
+L K + +G DP + + I + G+ +AG+ A + ++G++
Sbjct: 474 -YLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQ 532
Query: 405 VPRFDYNKFLHYYSNEEGVVMFEEVGKKLREV 436
+ Y+ ++ + +E K RE+
Sbjct: 533 PDVWTYSIMINGLCRRG---LLDEASKLFREM 561
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 118/281 (41%), Gaps = 26/281 (9%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N I++N +++ K + ID EM R+ L+ D T+ + L V L+ + F
Sbjct: 394 NVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALF 453
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI-----LKLSEWIKPNEIAYGWLIKG 186
H M C +L ++ LC+ + + EA L+ L I+ N IA I G
Sbjct: 454 HEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIA----IDG 509
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
C G+L A +++ ++ +G +P + MI + DEA K+F + MD+
Sbjct: 510 MCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLF-----REMDEN 564
Query: 247 GLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGR---- 298
G + Y + + + S+A +L+EM RG AD T++ + L G
Sbjct: 565 GCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSL 624
Query: 299 ---LREAYKVVEEIEKPDISLYHGLIKGLLRLRRAREATQV 336
LR K + + + H L KG+ R + Q
Sbjct: 625 KQILRNGCKWISTFDSSSSTGLHILQKGISHERNESDLVQA 665
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 101/242 (41%), Gaps = 41/242 (16%)
Query: 242 RMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
+MD G+ T I+I+ C ++ A+++L ++ K G + D T +++I G+ G
Sbjct: 86 QMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEG 145
Query: 298 RLREAY----KVVEEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYI 353
++ EA K++ E +PD+ Y LI GL ++ A ++ M+++ C+P + Y
Sbjct: 146 KIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAY- 204
Query: 354 MLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKF 413
+TI + L K + +A ++ +G+ F YN
Sbjct: 205 ---------------------NTI-IDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSL 242
Query: 414 LHYYSN-----EEGVVMFEEVGKKLRE--VGLADLADIFQRYGKKMATR---ERRRNRAI 463
+H N ++ E V K+ V + D + GK ++ R +
Sbjct: 243 IHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGV 302
Query: 464 EP 465
EP
Sbjct: 303 EP 304
>gi|302780869|ref|XP_002972209.1| hypothetical protein SELMODRAFT_96926 [Selaginella moellendorffii]
gi|300160508|gb|EFJ27126.1| hypothetical protein SELMODRAFT_96926 [Selaginella moellendorffii]
Length = 363
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 137/302 (45%), Gaps = 10/302 (3%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFF 131
N +T+N ++ + +D ++EM + D T+ + L + + ++ F
Sbjct: 9 NMVTYNSLIHGFCMTNGVDSTLLLMEEMTATGCLPDINTYNTLIDGLCKTGRVPEVNRLF 68
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDV 190
M C + + ++ C+ + A L L + P+ + + L++GYC+
Sbjct: 69 GEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDVVTFPTLVEGYCNA 128
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G + +A ++ + P + +++ F K+ + EA +V + M K +
Sbjct: 129 GLVDDAERLLEEIVASDCSPDVYTYTSLVDGFCKVKRMVEAHRVLKRM-AKGECQPNVVI 187
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y +ID C GK + AY +LEEM G++ + +T S+I G G L EA+K++E +E
Sbjct: 188 YTALIDAFCSAGKPTVAYKLLEEMVGNGVQPNAITYRSLIGGFCGTGDLEEAHKMLERLE 247
Query: 311 -----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH--LGKR 363
K D+ Y ++ GL R R A ++ + + G P Y+ L++G L ++
Sbjct: 248 RNENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGEMTLSRK 307
Query: 364 GR 365
GR
Sbjct: 308 GR 309
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 113/265 (42%), Gaps = 31/265 (11%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
I+PN + Y LI G+C + + MT G P I+ + +I+ K + E
Sbjct: 6 IEPNMVTYNSLIHGFCMTNGVDSTLLLMEEMTATGCLPDINTYNTLIDGLCKTGRVPEVN 65
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
++F M+ K + + TY +I CK +I+ A T+ ++M K+ D +T +++ G
Sbjct: 66 RLFGEMKAKFCNP-DVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDVVTFPTLVEG 124
Query: 293 LLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
G + +A +++EEI PD+ Y L+ G +++R EA +V + M K C+P
Sbjct: 125 YCNAGLVDDAERLLEEIVASDCSPDVYTYTSLVDGFCKVKRMVEAHRVLKRMAKGECQPN 184
Query: 349 MHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRF 408
+ Y T + AGK A K +E ++ GV+
Sbjct: 185 VVIY-----------------------TALIDAFCSAGKPTVAYKLLEEMVGNGVQPNAI 221
Query: 409 DYNKFLHYYSNEEGVVMFEEVGKKL 433
Y + + G EE K L
Sbjct: 222 TYRSLIGGFC---GTGDLEEAHKML 243
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 76/175 (43%), Gaps = 22/175 (12%)
Query: 278 GIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREA 333
GIE + +T +S+I+G + ++EE+ PDI+ Y+ LI GL + R E
Sbjct: 5 GIEPNMVTYNSLIHGFCMTNGVDSTLLLMEEMTATGCLPDINTYNTLIDGLCKTGRVPEV 64
Query: 334 TQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKG---------------PDPLVNFDTIF 378
++F EM + C P + TY L+ G K R PD +V F T+
Sbjct: 65 NRLFGEMKAKFCNPDVITYSCLIGGFC-KLDRINMACTLFDDMLKQAALPD-VVTFPTL- 121
Query: 379 VGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKL 433
V G AG DA + +E ++ + Y + + + +V V K++
Sbjct: 122 VEGYCNAGLVDDAERLLEEIVASDCSPDVYTYTSLVDGFCKVKRMVEAHRVLKRM 176
>gi|449441228|ref|XP_004138384.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01400,
mitochondrial-like [Cucumis sativus]
gi|449499186|ref|XP_004160743.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01400,
mitochondrial-like [Cucumis sativus]
Length = 482
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 159/369 (43%), Gaps = 57/369 (15%)
Query: 60 FQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTL 118
F Y + QP F +S + ++ +G+S+ L + L RR V F +
Sbjct: 93 FDYACR-QPHFRPSSSSLLVLILKLGRSKYFSLIDDLLLSFKSRRYPVTPTAFSYIIKIY 151
Query: 119 AEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS--EWIKPN 176
E K + F+ M D GC S + LN++++ L + + + + K + + PN
Sbjct: 152 GEADLPDKALKVFYTMIDFGCTPSSKQLNRILEILVSHRNFIRPAFDLFKNARHHGVLPN 211
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
+Y LI+ +C G++ A ++N M + P ++
Sbjct: 212 TKSYNILIRAFCWNGNISIAYTLFNKMFERNVIPDVE----------------------- 248
Query: 237 MMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLAR 296
TYR ++ +C++ +++ A +LE+M +G D L+ ++++ L +
Sbjct: 249 -------------TYRTLMQGLCRKNQVNGAVDLLEDMLNKGYIPDTLSYATLLNSLCRK 295
Query: 297 GRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
+LREAYK++ ++ PDI+ Y+ +I G R RA +A ++ +M GC P + +Y
Sbjct: 296 KKLREAYKLLCRMKVKGCNPDIAHYNTVIMGFCREGRALDACKILEDMQSNGCLPNLVSY 355
Query: 353 ------------IMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMN 400
L +G++ + KG P + V G G+ ++ +E ++
Sbjct: 356 ESLTNGLCDQGMFELAKGYVEEMTLKGFYPHFSVIHALVKGFHSIGRIHESCSVLEDMLK 415
Query: 401 RGVEVPRFD 409
RG + P D
Sbjct: 416 RG-KAPHSD 423
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 93/210 (44%), Gaps = 3/210 (1%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIM 134
T+ ++ + + ++ + L++M + + D ++ L +L ++L++ M
Sbjct: 249 TYRTLMQGLCRKNQVNGAVDLLEDMLNKGYIPDTLSYATLLNSLCRKKKLREAYKLLCRM 308
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDL 193
GC + N V+ C+ ++A ++ + S PN ++Y L G CD G
Sbjct: 309 KVKGCNPDIAHYNTVIMGFCREGRALDACKILEDMQSNGCLPNLVSYESLTNGLCDQGMF 368
Query: 194 IEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRI 253
A MT +GF P V+ +++ F I + E+ V + M +KR T+ I
Sbjct: 369 ELAKGYVEEMTLKGFYPHFSVIHALVKGFHSIGRIHESCSVLEDM-LKRGKAPHSDTWEI 427
Query: 254 VIDWMCKRGKISQAYTMLEEMFKRGIEADN 283
+I +C+ ++ + E++ K+ + D
Sbjct: 428 IISGICEVEDTAKFCEVWEKILKKDVRRDT 457
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 109/248 (43%), Gaps = 11/248 (4%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFF 131
N+ ++N ++ + NI + + +M R ++ D +T++ + L ++ V+
Sbjct: 211 NTKSYNILIRAFCWNGNISIAYTLFNKMFERNVIPDVETYRTLMQGLCRKNQVNGAVDLL 270
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDV 190
M + G ++ +LC++K + EA L+ ++ + P+ Y +I G+C
Sbjct: 271 EDMLNKGYIPDTLSYATLLNSLCRKKKLREAYKLLCRMKVKGCNPDIAHYNTVIMGFCRE 330
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G ++A KI M G P++ + + D+ M V+ M G
Sbjct: 331 GRALDACKILEDMQSNGCLPNLVSYESLTNGLC-----DQGMFELAKGYVEEMTLKGFYP 385
Query: 251 YRIVIDWMCKR----GKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
+ VI + K G+I ++ ++LE+M KRG + T II G+ + +V
Sbjct: 386 HFSVIHALVKGFHSIGRIHESCSVLEDMLKRGKAPHSDTWEIIISGICEVEDTAKFCEVW 445
Query: 307 EEIEKPDI 314
E+I K D+
Sbjct: 446 EKILKKDV 453
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 133/318 (41%), Gaps = 64/318 (20%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
P+ ++Y +I GYC G+L + K+ M +G +P+
Sbjct: 8 PDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPN----------------------- 44
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
L TY +I +CK GK+ A +L EM +GI D + +++I G
Sbjct: 45 -------------LYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFC 91
Query: 295 ARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
G ++ AYK+ +E+EK PD Y +I GL R + EA +VF +M RG EP
Sbjct: 92 KLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEV 151
Query: 351 TYIMLLQGHLGKRG-------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVER 397
TY L+ G+ K G + G P V T GL K G+ A + +
Sbjct: 152 TYTTLIDGYC-KSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHE 210
Query: 398 VMNRGVEVPRFDYNKFLHYYSNE----EGVVMFEEV---GKKLREVGLADLADIFQRYGK 450
+ +G+++ YN ++ + V + EE+ G + L D + + G+
Sbjct: 211 MCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGE 270
Query: 451 KMATRERRR---NRAIEP 465
+ E R +R ++P
Sbjct: 271 MVKAHELLREMLDRGLQP 288
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 146/335 (43%), Gaps = 42/335 (12%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVNFF 131
N T+N ++ ++ KS +D L+EM + +V D L+ ++ ++ F
Sbjct: 44 NLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLF 103
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDV 190
M V+ LC+ ++EA + K+ S ++P+E+ Y LI GYC
Sbjct: 104 DEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKS 163
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G++ +A + N M G P++ + + K+ + D A ++ M K + L + T
Sbjct: 164 GEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGL-QLNICT 222
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE-- 308
Y +++ +CK G I QA ++EEM G+ D +T ++++ G + +A++++ E
Sbjct: 223 YNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREML 282
Query: 309 ----------------------------------IEK---PDISLYHGLIKGLLRLRRAR 331
+EK P+ + Y+ L+K R
Sbjct: 283 DRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMR 342
Query: 332 EATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRK 366
T++++ M RG P +TY +L++GH R K
Sbjct: 343 CTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMK 377
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 129/278 (46%), Gaps = 7/278 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFF 131
+ +T+ ++D KS ++ + +M + L N T+ L ++ ++
Sbjct: 149 DEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELL 208
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDV 190
H M G + ++ N +V LC+ + +A L+ ++ + P+ I + L+ YC
Sbjct: 209 HEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKT 268
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G++++A ++ M D G +P++ + ++ F ++ ++ M K + +T
Sbjct: 269 GEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMP-NTTT 327
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y ++ C R + + + M RG+ D+ T + +I G ++EA+ + +E+
Sbjct: 328 YNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMA 387
Query: 311 KPDISL----YHGLIKGLLRLRRAREATQVFREMIKRG 344
+ +L Y+ +IKG + ++ EA ++F EM + G
Sbjct: 388 EKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREG 425
>gi|125596712|gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
Length = 604
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 127/259 (49%), Gaps = 11/259 (4%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT- 117
FF+ + P N++T++ +V + + N+ + E E D +++
Sbjct: 303 FFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISG 362
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPN 176
L + L+ + M + G + + N ++ C++K + EA L+ ++ E I+P+
Sbjct: 363 LTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPD 422
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
Y L+ G C GD ++ M D+G +PS+ ++ + K+ K DEA+++
Sbjct: 423 VCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRIL- 481
Query: 237 MMRVKRMDDLGLST----YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
+ MD+ G+ Y +ID++CKRG + A + +EM ++ + A+ T ++++ G
Sbjct: 482 ----RSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKG 537
Query: 293 LLARGRLREAYKVVEEIEK 311
L + +A+++++++ +
Sbjct: 538 LRDKNMPEKAFELMDQMRE 556
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 162/391 (41%), Gaps = 31/391 (7%)
Query: 70 FAHNSI--TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKM 127
FA NSI R+ D+ G +R + +Q R + T+ I + L + +
Sbjct: 137 FAFNSILAALARVRDVPGMAR----IYALMQGCASVR-PDVVTYGILVNGLCKAGRVGDA 191
Query: 128 VNFFHIMN--DCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI---LKLSEWIKPNEIAYGW 182
+ M+ D + LN VV LC+ V EA + + PN + Y
Sbjct: 192 LRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNC 251
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
LI +C VG++ A ++ M +EG +I ++ ++ + + A++ F+ R
Sbjct: 252 LIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVW 311
Query: 243 MDDLGLS-TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
+ G + TY ++ + + A + E G D + ++I GL GRL +
Sbjct: 312 PEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLED 371
Query: 302 AYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
A + ++ K D Y+ LI G R +R EA ++ +EM + G P + TY LL
Sbjct: 372 ACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLS 431
Query: 358 GH------------LGKRGRKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVE 404
G LGK G P ++ F T+ V G K GK +A + + + G+
Sbjct: 432 GSCKAGDFAAVDELLGKMIDDGCQPSVITFGTL-VHGYCKVGKIDEALRILRSMDESGIH 490
Query: 405 VPRFDYNKFLHYYSNEEGVVMFEEVGKKLRE 435
YN + + V + E+ +++E
Sbjct: 491 PNNVIYNTLIDFLCKRGDVDLAIELFDEMKE 521
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 125/284 (44%), Gaps = 32/284 (11%)
Query: 164 YLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMT--DEGFEPSIDVVDKMIET 221
Y +++ ++P+ + YG L+ G C G + +A ++ + M+ D P + ++ +++
Sbjct: 159 YALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDG 218
Query: 222 FFKINKDDEAMK-VFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIE 280
K + EA+ V Q M TY +ID C+ G IS AY ++E+M G+
Sbjct: 219 LCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVP 278
Query: 281 ADNLTLSSIIYGLLARGRLREAYKVVEEIE------KPDISLYHGLIKGLLRLRRAREAT 334
+ +TL++I+ GL GR A + E K + Y L+ LL A
Sbjct: 279 QNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAM 338
Query: 335 QVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKY 394
++F E + +GH PD ++ F + GL +AG+ DA
Sbjct: 339 ELFHEKMS--------------EGH-------SPDAIMYF--TMISGLTQAGRLEDACSM 375
Query: 395 VERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
+ G ++ YN + + ++ + E+ ++++EVG+
Sbjct: 376 ASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGI 419
>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 570
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 178/396 (44%), Gaps = 28/396 (7%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRL-VNDKTFKIALMTLAEVRELKKMVNFF 131
NS + +R + I+ ++ NI+ ++ + L D +L + + + F
Sbjct: 21 NSHSNSRTLPILNETTNINRTLSSVSKPQTHTLDFKDTHLLKSLSRSCKAGNFNESLYFL 80
Query: 132 -HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDV 190
H++N G + + + K++ L K + +A ++ L P+ IAY +I G+C
Sbjct: 81 RHLVNK-GHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHGHPDLIAYNAIITGFCRA 139
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
+ A ++ + M ++GF P I + +I + D A++ F+ +K + T
Sbjct: 140 NRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALE-FKNQLLKENCKPTVVT 198
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y I+I+ +G I +A +L+EM + ++ D T +SII G+ G + A++++ I
Sbjct: 199 YTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSIS 258
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ--------- 357
PD+ Y+ L++GLL + ++ +M+ RGCE + TY +L+
Sbjct: 259 SKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVE 318
Query: 358 ---GHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFL 414
G L +KG P + L K G+ A + ++ +++ G +YN L
Sbjct: 319 EGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTIL 378
Query: 415 HYYSN----EEGVVMFEEVGKKLREVGLADLADIFQ 446
+E + +FE++G EVG + A +
Sbjct: 379 ACLCKQKRADEALSIFEKLG----EVGCSPNASSYN 410
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 126/256 (49%), Gaps = 22/256 (8%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEA 196
GCE ++ + ++ ++C+ V E L+ + + +KP+ Y LI C G + A
Sbjct: 296 GCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLA 355
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYR 252
++ ++M +G P I + ++ K + DEA+ +F+ ++ ++G S +Y
Sbjct: 356 IEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFE-----KLGEVGCSPNASSYN 410
Query: 253 IVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE-- 310
+ + G +A M+ EM +G++ D +T +S+I L G + EA +++ ++E
Sbjct: 411 SMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEME 470
Query: 311 ----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG-- 364
KP + Y+ ++ GL ++ R +A +V M+ +GC P TY L++G +G G
Sbjct: 471 SSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEG-IGFGGCL 529
Query: 365 ---RKGPDPLVNFDTI 377
R LVN D I
Sbjct: 530 NDARDLATTLVNMDAI 545
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 106/240 (44%), Gaps = 4/240 (1%)
Query: 66 AQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVREL 124
A+ C A N +T++ ++ + + ++ L++M ++ L D + + L + +
Sbjct: 294 ARGCEA-NVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRV 352
Query: 125 KKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWL 183
+ +M GC + N ++ LC++K EA + KL E PN +Y +
Sbjct: 353 DLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSM 412
Query: 184 IKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM 243
G + A + M D+G +P + +I + DEA+++ M ++
Sbjct: 413 FSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESS 472
Query: 244 D-DLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
+ + +Y IV+ +CK ++S A +L M +G + T + +I G+ G L +A
Sbjct: 473 ECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDA 532
>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
Length = 442
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 129/279 (46%), Gaps = 26/279 (9%)
Query: 95 ETLQEMGRRRLV-NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTL 153
E + EM R N+ TF + + +L L++ + M+ GC ++ N ++ L
Sbjct: 133 ELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGL 192
Query: 154 CQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSI 212
C+++ V A L+ K+ + KP+ + Y L+KG C ++A ++ + MT G P
Sbjct: 193 CEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDN 252
Query: 213 DVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGKISQAY 268
+ +I + +A++VF K+M D G + TY +I + K K+ QA
Sbjct: 253 VTFNTLIGFLCQKGLMVDAIEVF-----KQMPDKGCTPNSITYSTIISGLAKATKLDQAL 307
Query: 269 TMLEEMFKRGIEADNLTLSSIIYGLLAR-----GRLREAYKVVEEIEKPDIS----LYHG 319
+ EM +G D IY LLA + EA + V +++ IS LY+
Sbjct: 308 ELFNEMGHKGFNPDK------IYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNA 361
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
++ GL R + A + M+ GC P TY++L++G
Sbjct: 362 ILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEG 400
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 166/352 (47%), Gaps = 23/352 (6%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLI 166
N T+ + TL E +++ ++ M GC + N +++ C+ + +A LI
Sbjct: 6 NAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELI 65
Query: 167 -LKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI 225
L +E PN + Y L+ G C GD+ +A ++ + G +PS + +++
Sbjct: 66 DLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSA 125
Query: 226 NK-DDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNL 284
+ D V +M+R + +T+ +VI +C++G + QA +LE+M K G A+ +
Sbjct: 126 ERWGDADELVTEMLRENCPPNE--ATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIV 183
Query: 285 TLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREM 340
T ++II GL + + A ++ +++ KPDI Y+ L+KGL R +A ++ M
Sbjct: 184 TYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNM 243
Query: 341 IKRGCEPTMHTYIMLLQGHLGKRG---------RKGPDPLVNFDTI----FVGGLVKAGK 387
+ GC P T+ L+ G L ++G ++ PD ++I + GL KA K
Sbjct: 244 TQNGCLPDNVTFNTLI-GFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATK 302
Query: 388 SLDAAKYVERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVGLA 439
A + + ++G P Y ++++ + + +KL++ G++
Sbjct: 303 LDQALELFNEMGHKGFN-PDKIYQLLAECLNDDDTIEEAIQTVRKLQDSGIS 353
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 129/283 (45%), Gaps = 21/283 (7%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
++PN Y LI C+ G + +A + + M G P + + ++E K +AM
Sbjct: 3 VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
++ +MR + + TY +++D MC G + A +L + G + + ++++ G
Sbjct: 63 ELIDLMRAEGCTPNNV-TYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKG 121
Query: 293 LLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPT 348
L + R +A ++V E+ + P+ + ++ +I L R ++A Q+ +M K GC
Sbjct: 122 LCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTAN 181
Query: 349 MHTYIMLLQGHLGKRGRKG--------------PDPLVNFDTIFVGGLVKAGKSLDAAKY 394
+ TY ++ G +R G PD +V ++T+ GL A + +DA +
Sbjct: 182 IVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPD-IVTYNTLL-KGLCSAARWVDAEEL 239
Query: 395 VERVMNRGVEVPRFDYNKFLHYYSNEEGVVMFEEVGKKLREVG 437
++ + G +N + + + +V EV K++ + G
Sbjct: 240 MDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKG 282
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 116/257 (45%), Gaps = 15/257 (5%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAEVRELKKMVNFF 131
N +T+N +++ + + RN+D L +M D T+ L L
Sbjct: 181 NIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELM 240
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
M GC N ++ LCQ+ L+V+A + ++ + PN I Y +I G
Sbjct: 241 DNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKA 300
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFK-INKDDEAMKVFQMMRVKRMDDLGLS 249
L +A +++N M +GF P DK+ + + +N DD + Q +R ++ D G+S
Sbjct: 301 TKLDQALELFNEMGHKGFNP-----DKIYQLLAECLNDDDTIEEAIQTVR--KLQDSGIS 353
Query: 250 T----YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
Y ++ +C+ GK A ++ M G D+LT +I GL G L EA ++
Sbjct: 354 PHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEAREL 413
Query: 306 VEEIEKPDISLYHGLIK 322
+ ++ D+ L + LIK
Sbjct: 414 LIKLCSRDV-LVNSLIK 429
>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
Length = 647
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 174/385 (45%), Gaps = 37/385 (9%)
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVNFFHIM 134
T+ ++D + K+ ++ +M D AL++ LA++ +L + + + + M
Sbjct: 148 TYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQM 207
Query: 135 NDCGCEYSLE----MLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDV 190
+ GC +E + N V++ LC + +A +L + + + L+ C
Sbjct: 208 VENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDDSLDLTHFTFNPLVAALCKA 267
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL-- 248
EA M++ P++ +++ F K+ + DEA+ +++K + G
Sbjct: 268 ERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEAL-----LQLKEAVERGFIP 322
Query: 249 --STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
TY +ID +CK G++ + EM RG E D +T +++I G + + +A++V
Sbjct: 323 DAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVY 382
Query: 307 EEIEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
++ + + Y+ ++ GL + R EA F M +RGC T+ TY L+ G +
Sbjct: 383 RQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSE 442
Query: 363 RG------------RKGPDP-LVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFD 409
+G +P LV+++ I + GL +AGK A Y E+++ R + +
Sbjct: 443 GNVSAAVELFRRMLDRGCEPNLVSYN-IIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYT 501
Query: 410 YNKFLHYYSNE-----EGVVMFEEV 429
+N FLH +GV +FE +
Sbjct: 502 FNSFLHGLCQRLDTVGDGVELFESM 526
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 169/387 (43%), Gaps = 28/387 (7%)
Query: 75 ITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRELKKMVNFFHI 133
+T+N +D + K+ +D ++ L++M ++ + AL+ L + L + +
Sbjct: 77 VTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQ 136
Query: 134 MNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGD 192
M + G +L+ V+ L + V EA+ + + L +P+ Y LI G +G
Sbjct: 137 MVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGK 196
Query: 193 LIEASKIWNLMTDEG----FEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
L EA N M + G EP + + + +I ++A+ F + D L L
Sbjct: 197 LDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELD----DSLDL 252
Query: 249 S--TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY-KV 305
+ T+ ++ +CK + +A +++M +R T +S++ G L GRL EA ++
Sbjct: 253 THFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQL 312
Query: 306 VEEIEK---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG---- 358
E +E+ PD Y +I GL +L R E + F EM RG EP TY L+ G
Sbjct: 313 KEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKA 372
Query: 359 ------HLGKRGRKGPDPLVNFDT--IFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY 410
H R +V+ T I + GL KAG+ +A + RG Y
Sbjct: 373 KMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTY 432
Query: 411 NKFLHYYSNEEGVVMFEEVGKKLREVG 437
+ + + +E V E+ +++ + G
Sbjct: 433 SALMDGFCSEGNVSAAVELFRRMLDRG 459
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 140/331 (42%), Gaps = 27/331 (8%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
F + + L + L + + GCE N + LC+ + V +A L+ K+
Sbjct: 43 AFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKM 102
Query: 170 SEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
E P + Y L+ G G L EA I M ++G P++ +I+ K +
Sbjct: 103 DEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRV 162
Query: 229 DEAMKVFQMMRVK--RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFK----RGIEAD 282
+EA ++F M R D Y +I + K GK+ +A L +M + RG+E D
Sbjct: 163 EEARRIFVDMLGNGCRPDAF---VYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPD 219
Query: 283 NLTLSSIIYGLLARGRLREAYKVVEEIEKP-DIS--LYHGLIKGLLRLRRAREATQVFRE 339
+ + +I L A G L +A +E++ D++ ++ L+ L + R EA ++
Sbjct: 220 VVIHNLVIRQLCASGNLEDALAYFDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKK 279
Query: 340 MIKRGCEPTMHTYIMLLQGHLGKRGR-------------KGPDPLVNFDTIFVGGLVKAG 386
M +R C PT+ TY L+ G L K GR +G P T + GL K G
Sbjct: 280 MSERRCFPTLFTYTSLVDGFL-KLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLG 338
Query: 387 KSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
+ + + + NRG E Y + +
Sbjct: 339 RVEEGCERFHEMRNRGYEPDAVTYAALIDGF 369
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 133/329 (40%), Gaps = 40/329 (12%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT- 117
Q + + F +++T+ ++D + K ++ E EM R D AL+
Sbjct: 309 LLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDG 368
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPN 176
+ + + K + M G S N ++ LC+ V EA L + E
Sbjct: 369 FMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVAT 428
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
+ Y L+ G+C G++ A +++ M D G EP++ + +I + K +A F+
Sbjct: 429 VVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFE 488
Query: 237 MMR------------------VKRMDDLG-----------------LSTYRIVIDWMCKR 261
+ +R+D +G L +Y I++D +C+
Sbjct: 489 KLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRA 548
Query: 262 GKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK---PDISLYH 318
G + + EM RG+ D + +++I L GR+ EA +V E+E+ PD Y
Sbjct: 549 GGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRSAPDAWSYW 608
Query: 319 GLIKGLLRLRRAREATQVFREMIKRGCEP 347
L+ L R R EA + M +GC P
Sbjct: 609 SLLDALSRCERMEEARLLSFHMKLQGCAP 637
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 116/260 (44%), Gaps = 27/260 (10%)
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKR 242
L+ G C G L A + + M P + +I + + DEA V + V+
Sbjct: 15 LLNGLCKTGQLDRAMLLLDEMP---CSPDMVAFTVVINGLCREKRLDEAFSVLERA-VRA 70
Query: 243 MDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA 302
+ TY + ID +CK ++ A+ +L++M ++ +T ++++ GLL GRL EA
Sbjct: 71 GCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEA 130
Query: 303 YKVVEE-IEK---PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
++E+ +EK P + Y +I GL + R EA ++F +M+ GC P Y L+ G
Sbjct: 131 MAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISG 190
Query: 359 HLGKRGR-----------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNR 401
L K G+ +G +P V + + L +G DA Y + ++
Sbjct: 191 -LAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDE-LDD 248
Query: 402 GVEVPRFDYNKFLHYYSNEE 421
+++ F +N + E
Sbjct: 249 SLDLTHFTFNPLVAALCKAE 268
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 140/323 (43%), Gaps = 34/323 (10%)
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
P+ +A+ +I G C L EA + G EP + I+ K + D+A +
Sbjct: 38 SPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQ 97
Query: 234 VFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
+ + M K+ + TY ++D + K G++ +A +LE+M ++G T + +I GL
Sbjct: 98 LLKKMDEKKCLPTTV-TYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGL 156
Query: 294 LARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGC---- 345
GR+ EA ++ ++ +PD +Y LI GL ++ + EA +M++ GC
Sbjct: 157 SKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGV 216
Query: 346 EPTMHTYIMLLQGHLGKRGRKGPDPLVNFDTI-------------FVGGLVKAGKSLDAA 392
EP + + ++++ L G D L FD + V L KA ++ +A
Sbjct: 217 EPDVVIHNLVIR-QLCASGNL-EDALAYFDELDDSLDLTHFTFNPLVAALCKAERTEEAI 274
Query: 393 KYVERVMNRGVEVPRFDY----NKFLHYYSNEEGVVMFEEV---GKKLREVGLADLADIF 445
+V+++ R F Y + FL +E ++ +E G V + D
Sbjct: 275 AFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGL 334
Query: 446 QRYGKKMATRER---RRNRAIEP 465
+ G+ ER RNR EP
Sbjct: 335 CKLGRVEEGCERFHEMRNRGYEP 357
>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
Length = 996
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 159/358 (44%), Gaps = 41/358 (11%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMV 128
F ++ T+++++ ++ + +D + +EM +V D T+ I + + +V L++
Sbjct: 476 FIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQAR 535
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKT-LCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGY 187
+F M GC ++ ++ L RK+ + + LSE PN + Y LI G+
Sbjct: 536 KWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGH 595
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C G + +A +I+ M P +D+ +FKI DD ++ D
Sbjct: 596 CKSGQIEKACQIYARMRGNADIPDVDM-------YFKI--DDGNIR-----------DPN 635
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
+ TY ++D +CK K+ +A +L+ M G E +++ ++I G G+L EA V
Sbjct: 636 IFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFT 695
Query: 308 EIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
++ + P++ Y LI L + +R A +V M++ C P + Y ++ G L K
Sbjct: 696 KMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDG-LCKV 754
Query: 364 GR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRF 408
G+ KG P V T + G KAGK +D + R M P F
Sbjct: 755 GKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGK-VDKCLELMRQMGAKGCAPNF 811
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 95/187 (50%), Gaps = 5/187 (2%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
PN YG L+ G C + EA + ++M+ EG EP+ V D +I+ F K+ K DEA V
Sbjct: 634 PNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMV 693
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
F M +R + TY +ID + K ++ A +L M + + + + +I GL
Sbjct: 694 FTKMS-ERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLC 752
Query: 295 ARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
G+ EAY+++ +E+ P++ Y +I G + + + ++ R+M +GC P
Sbjct: 753 KVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFV 812
Query: 351 TYIMLLQ 357
TY +L+
Sbjct: 813 TYRVLIN 819
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 133/308 (43%), Gaps = 25/308 (8%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRR----LVNDKTFKIALMTLAEVRELK 125
F +++ + +M+ + ++ LF E + + R R + N T++I L R+L
Sbjct: 295 FKLDTVIYTQMISGLCEA---SLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLG 351
Query: 126 KMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLI 184
+ +M GC S + N ++ C+ A L+ K+ + +P + Y LI
Sbjct: 352 RCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILI 411
Query: 185 KGYC--------DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF- 235
G C DV +L E K + M D + V + K ++A +
Sbjct: 412 GGICGNEKLPSLDVLELAE--KAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIR 469
Query: 236 QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
+MM + D STY VI +C K+ A+ + EEM + D T + +I
Sbjct: 470 EMMSKGFIPDT--STYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCK 527
Query: 296 RGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
G L++A K +E+ + P++ Y LI L+ R+ A ++F M+ GC P + T
Sbjct: 528 VGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVT 587
Query: 352 YIMLLQGH 359
Y L+ GH
Sbjct: 588 YTALIDGH 595
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 108/243 (44%), Gaps = 40/243 (16%)
Query: 155 QRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDV 214
++L + K L L PN I Y +I G C VG EA ++ ++M ++G P++
Sbjct: 719 DKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVT 778
Query: 215 VDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEM 274
MI+ F K K D+ +++ + M K TYR++I+ C G + A+ +L+EM
Sbjct: 779 YTAMIDGFGKAGKVDKCLELMRQMGAKGCAP-NFVTYRVLINHCCAAGLLDDAHQLLDEM 837
Query: 275 -----------FKRGIE----------------ADNLTLSSI------IYGLLARGRLRE 301
+++ IE A+N+ + I I GRL
Sbjct: 838 KQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLEL 897
Query: 302 AYKVVEEIEK------PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
A ++ +E+ D LY LI+ L + +A +++ +MIKRG P + + L
Sbjct: 898 ALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYL 957
Query: 356 LQG 358
++G
Sbjct: 958 VKG 960
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 135/294 (45%), Gaps = 33/294 (11%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT---- 117
+T+ ++ + N T++ ++D + K + +DL + L M L N + + T
Sbjct: 694 FTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRM----LENSCAPNVIIYTEMID 749
Query: 118 -LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKP 175
L +V + + +M + GC ++ ++ + V + L+ ++ ++ P
Sbjct: 750 GLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAP 809
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
N + Y LI C G L +A ++ + M + + K+IE F N++
Sbjct: 810 NFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF---NRE------- 859
Query: 236 QMMRVKRMDDLG-------LSTYRIVIDWMCKRGKISQAYTMLEEMFK--RGIEADNLTL 286
++ + +D++ + YRI+ID CK G++ A + +EM AD
Sbjct: 860 FIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLY 919
Query: 287 SSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQV 336
SS+I L ++ +A+++ ++ K P++S++ L+KGL+R+ R EA Q+
Sbjct: 920 SSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQL 973
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 106/286 (37%), Gaps = 43/286 (15%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
+++ LC+ L EA + ++ S PN + Y L+ G L +I ++M
Sbjct: 303 TQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMIT 362
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKR 261
EG PS + + +I + + A K+ +K+M D G Y I+I +C
Sbjct: 363 EGCYPSRRIFNSLIHAYCRSGDYSYAYKL-----LKKMGDCGCQPGYVVYNILIGGICGN 417
Query: 262 GKISQ------AYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK---- 311
K+ A EM + + + +S++ L G+ +AY ++ E+
Sbjct: 418 EKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFI 477
Query: 312 PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPL 371
PD S Y +I L + A +F EM P + TY
Sbjct: 478 PDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTY------------------- 518
Query: 372 VNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
TI + K G A K+ + ++ G Y +H Y
Sbjct: 519 ----TILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAY 560
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 101/274 (36%), Gaps = 58/274 (21%)
Query: 144 EMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNL 202
++LN +++ C+ L A + +L + KP+ + Y L++ + + L A +
Sbjct: 198 KLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHRE 257
Query: 203 MTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRG 262
M+D GF N D + F + +CK G
Sbjct: 258 MSDSGF-----------------NMDGYTLGCF-------------------VHLLCKAG 281
Query: 263 KISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYH 318
+ +A ++E K + D + + +I GL EA + + P++ Y
Sbjct: 282 RWREALALIE---KEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYR 338
Query: 319 GLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------------LGKRGRK 366
L+ G LR R+ ++ MI GC P+ + L+ + L K G
Sbjct: 339 ILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDC 398
Query: 367 GPDPLVNFDTIFVGGLVKAGK--SLDAAKYVERV 398
G P I +GG+ K SLD + E+
Sbjct: 399 GCQPGYVVYNILIGGICGNEKLPSLDVLELAEKA 432
>gi|357509511|ref|XP_003625044.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500059|gb|AES81262.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 521
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 135/285 (47%), Gaps = 21/285 (7%)
Query: 91 DLFWETLQEMGRRRLVNDKTFKIA--------------LMTLAEVRELKKMVNFFHIMND 136
D ++T M + R D K+ L ++ ++ + +V+F+ M
Sbjct: 154 DTLFKTFAHMNKLRNATDTFVKMKEYGFFPTVESCNAFLSSMLYLKRPELVVSFYRQMRR 213
Query: 137 CGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIE 195
++ +N VV C+ + +A ++ K+ + + PN + + LI GYCD G L
Sbjct: 214 NRISPNVYTINMVVSAYCKLGELNKASEVLEKMKDMGLCPNVVTFNSLISGYCDKGLLGL 273
Query: 196 ASKIWNLMTDE-GFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIV 254
A K+ +LM + G P++ + +I F K K EA +VF M++ + + TY +
Sbjct: 274 ALKVRDLMMGKNGVFPNVVTFNTLINGFCKEGKLHEANRVFSEMKLANVAP-NVVTYNTL 332
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK--- 311
I+ + G + EEM + ++AD LT + +I GL G+ ++A +V+E++K
Sbjct: 333 INGFGQAGNSEMGIGLFEEMERNKVKADILTYNGLILGLCKEGKTKKAAYMVKELDKGNL 392
Query: 312 -PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
P+ S + LI G + A V+R M++ G P +T+ ML
Sbjct: 393 VPNASTFSALIAGQCVRNNSERAFLVYRSMVRSGFSPNENTFRML 437
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 118/248 (47%), Gaps = 23/248 (9%)
Query: 178 IAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQM 237
+ + L K + + L A+ + M + GF P+++ + + + + + + + ++
Sbjct: 151 LVFDTLFKTFAHMNKLRNATDTFVKMKEYGFFPTVESCNAFLSSMLYLKRPELVVSFYRQ 210
Query: 238 MRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARG 297
MR R+ + T +V+ CK G++++A +LE+M G+ + +T +S+I G +G
Sbjct: 211 MRRNRISP-NVYTINMVVSAYCKLGELNKASEVLEKMKDMGLCPNVVTFNSLISGYCDKG 269
Query: 298 RLREAYKVVEEIEK-----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTY 352
L A KV + + P++ ++ LI G + + EA +VF EM P + TY
Sbjct: 270 LLGLALKVRDLMMGKNGVFPNVVTFNTLINGFCKEGKLHEANRVFSEMKLANVAPNVVTY 329
Query: 353 IMLLQGHLGKRG--------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERV 398
L+ G G+ G K ++ ++ + + GL K GK+ AA Y+ +
Sbjct: 330 NTLING-FGQAGNSEMGIGLFEEMERNKVKADILTYNGLIL-GLCKEGKTKKAA-YMVKE 386
Query: 399 MNRGVEVP 406
+++G VP
Sbjct: 387 LDKGNLVP 394
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 1/138 (0%)
Query: 173 IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAM 232
+K + + Y LI G C G +A+ + + P+ +I N + A
Sbjct: 357 VKADILTYNGLILGLCKEGKTKKAAYMVKELDKGNLVPNASTFSALIAGQCVRNNSERAF 416
Query: 233 KVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYG 292
V++ M V+ +T+R++ CK A +L +M +R + D+ LS + G
Sbjct: 417 LVYRSM-VRSGFSPNENTFRMLASAFCKNEDFDGAVQVLRDMLERFMTPDSSILSEVYSG 475
Query: 293 LLARGRLREAYKVVEEIE 310
L GR + A + EIE
Sbjct: 476 LCRCGRKQFALMLCSEIE 493
>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
Length = 1010
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 159/358 (44%), Gaps = 41/358 (11%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMV 128
F ++ T+++++ ++ + +D + +EM +V D T+ I + + +V L++
Sbjct: 476 FIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQAR 535
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKT-LCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGY 187
+F M GC ++ ++ L RK+ + + LSE PN + Y LI G+
Sbjct: 536 KWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGH 595
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C G + +A +I+ M P +D+ +FKI DD ++ D
Sbjct: 596 CKSGQIEKACQIYARMRGNADIPDVDM-------YFKI--DDGNIR-----------DPN 635
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
+ TY ++D +CK K+ +A +L+ M G E +++ ++I G G+L EA V
Sbjct: 636 IFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFT 695
Query: 308 EIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
++ + P++ Y LI L + +R A +V M++ C P + Y ++ G L K
Sbjct: 696 KMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDG-LCKV 754
Query: 364 GR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRF 408
G+ KG P V T + G KAGK +D + R M P F
Sbjct: 755 GKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGK-VDKCLELMRQMGAKGCAPNF 811
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 95/187 (50%), Gaps = 5/187 (2%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
PN YG L+ G C + EA + ++M+ EG EP+ V D +I+ F K+ K DEA V
Sbjct: 634 PNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMV 693
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
F M +R + TY +ID + K ++ A +L M + + + + +I GL
Sbjct: 694 FTKMS-ERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLC 752
Query: 295 ARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
G+ EAY+++ +E+ P++ Y +I G + + + ++ R+M +GC P
Sbjct: 753 KVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFV 812
Query: 351 TYIMLLQ 357
TY +L+
Sbjct: 813 TYRVLIN 819
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 133/308 (43%), Gaps = 25/308 (8%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRR----LVNDKTFKIALMTLAEVRELK 125
F +++ + +M+ + ++ LF E + + R R + N T++I L R+L
Sbjct: 295 FKLDTVIYTQMISGLCEA---SLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLG 351
Query: 126 KMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLI 184
+ +M GC S + N ++ C+ A L+ K+ + +P + Y LI
Sbjct: 352 RCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILI 411
Query: 185 KGYC--------DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF- 235
G C DV +L E K + M D + V + K ++A +
Sbjct: 412 GGICGNEKLPSLDVLELAE--KAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIR 469
Query: 236 QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
+MM + D STY VI +C K+ A+ + EEM + D T + +I
Sbjct: 470 EMMSKGFIPDT--STYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCK 527
Query: 296 RGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
G L++A K +E+ + P++ Y LI L+ R+ A ++F M+ GC P + T
Sbjct: 528 VGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVT 587
Query: 352 YIMLLQGH 359
Y L+ GH
Sbjct: 588 YTALIDGH 595
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 107/243 (44%), Gaps = 40/243 (16%)
Query: 155 QRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDV 214
++L + K L L PN I Y +I G C VG EA ++ ++M ++G P++
Sbjct: 719 DKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVT 778
Query: 215 VDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEM 274
MI+ F K K D+ +++ + M K TYR++I+ C G + A+ +L+EM
Sbjct: 779 YTAMIDGFGKAGKVDKCLELMRQMGAKGCAP-NFVTYRVLINHCCAAGLLDDAHQLLDEM 837
Query: 275 -----------FKRGIE----------------ADNLTLSSI------IYGLLARGRLRE 301
+++ IE A+N+ + I I GRL
Sbjct: 838 KQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLEL 897
Query: 302 AYKVVEEIEK------PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
A ++ + + D LY LI+ L + +A +++ +MIKRG P + + L
Sbjct: 898 ALELHKXMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYL 957
Query: 356 LQG 358
++G
Sbjct: 958 VKG 960
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 111/295 (37%), Gaps = 45/295 (15%)
Query: 140 EYSLEML--NKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEA 196
E+ L+ + +++ LC+ L EA + ++ S PN + Y L+ G L
Sbjct: 294 EFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRC 353
Query: 197 SKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYR 252
+I ++M EG PS + + +I + + A K+ +K+M D G Y
Sbjct: 354 KRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKL-----LKKMGDCGCQPGYVVYN 408
Query: 253 IVIDWMCKRGKISQ------AYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
I+I +C K+ A EM + + + +S++ L G+ +AY ++
Sbjct: 409 ILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSII 468
Query: 307 EEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
E+ PD S Y +I L + A +F EM P + TY
Sbjct: 469 REMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTY---------- 518
Query: 363 RGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
TI + K G A K+ + ++ G Y +H Y
Sbjct: 519 -------------TILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAY 560
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 130/288 (45%), Gaps = 33/288 (11%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT---- 117
+T+ ++ + N T++ ++D + K + +DL + L M L N + + T
Sbjct: 694 FTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRM----LENSCAPNVIIYTEMID 749
Query: 118 -LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKP 175
L +V + + +M + GC ++ ++ + V + L+ ++ ++ P
Sbjct: 750 GLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAP 809
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
N + Y LI C G L +A ++ + M + + K+IE F N++
Sbjct: 810 NFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF---NRE------- 859
Query: 236 QMMRVKRMDDLG-------LSTYRIVIDWMCKRGKISQAYTMLEEMFK--RGIEADNLTL 286
++ + +D++ + YRI+ID CK G++ A + + M AD
Sbjct: 860 FIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKXMSSCTSYSAADKDLY 919
Query: 287 SSIIYGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRA 330
SS+I L ++ +A+++ ++ K P++S++ L+KGL+R+ R
Sbjct: 920 SSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRT 967
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 101/274 (36%), Gaps = 58/274 (21%)
Query: 144 EMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNL 202
++LN +++ C+ L A + +L + KP+ + Y L++ + + L A +
Sbjct: 198 KLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHRE 257
Query: 203 MTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRG 262
M+D GF N D + F + +CK G
Sbjct: 258 MSDSGF-----------------NMDGYTLGCF-------------------VHLLCKAG 281
Query: 263 KISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYH 318
+ +A ++E K + D + + +I GL EA + + P++ Y
Sbjct: 282 RWREALALIE---KEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYR 338
Query: 319 GLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------------LGKRGRK 366
L+ G LR R+ ++ MI GC P+ + L+ + L K G
Sbjct: 339 ILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDC 398
Query: 367 GPDPLVNFDTIFVGGLVKAGK--SLDAAKYVERV 398
G P I +GG+ K SLD + E+
Sbjct: 399 GCQPGYVVYNILIGGICGNEKLPSLDVLELAEKA 432
>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Cucumis sativus]
Length = 645
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 145/340 (42%), Gaps = 55/340 (16%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N T+N ++D K N Q+M LV D TF I + L + E+K N F
Sbjct: 251 NVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLF 310
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS--------------------- 170
M ++ + N ++ C+ V EA L L+L
Sbjct: 311 VNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSV 370
Query: 171 ---------------EWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVV 215
E I N + Y LI G C G + +A +I + MT+ G EP++
Sbjct: 371 SRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITF 430
Query: 216 DKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMF 275
+I+ + KI AM ++ M +K + + TY +ID CK G + +A + +M
Sbjct: 431 STLIDGYCKIRNLQAAMGIYSEMVIKSLSP-DVVTYTAMIDGHCKYGSMKEALKLYSDML 489
Query: 276 KRGIEADNLTLSSIIYGLLARGRLREAYKV-VEEIE-------------KPDIS---LYH 318
GI + T+S ++ GL G++ +A ++ E+IE KP ++ Y
Sbjct: 490 DNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYT 549
Query: 319 GLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
LI GL + + +A ++F +M + G +P Y+++L+G
Sbjct: 550 ALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRG 589
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 146/344 (42%), Gaps = 19/344 (5%)
Query: 78 NRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFFHIMND 136
N ++ ++ K+ +L W +EM L TF + +L + F M
Sbjct: 151 NVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRV 210
Query: 137 CGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIE 195
G ++ + +++ LC + EA+ + + E + PN Y L+ GYC + + +
Sbjct: 211 KGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQ 270
Query: 196 ASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVI 255
A +++ M EG P + +I+ K + A +F M +K ++ Y +I
Sbjct: 271 ALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNM-IKFSVTPNIAVYNSLI 329
Query: 256 DWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEKPDI- 314
D CK G +S+A + E+ + + D T S +I GL + R EA + E++ K I
Sbjct: 330 DAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGIL 389
Query: 315 ---SLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGR------ 365
Y+ LI G + + +A ++ +M + G EP + T+ L+ G+ R
Sbjct: 390 ANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGI 449
Query: 366 ------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGV 403
K P V T + G K G +A K +++ G+
Sbjct: 450 YSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGI 493
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 70/168 (41%), Gaps = 15/168 (8%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N ITF+ ++D K RN+ EM + L D T+ + + +K+ + +
Sbjct: 426 NVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLY 485
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKP--------------NE 177
M D G + ++ ++ LC+ + +A L + E+ P N
Sbjct: 486 SDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNH 545
Query: 178 IAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKI 225
+AY LI G C G +A K+++ M G +P + M+ F++
Sbjct: 546 VAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQV 593
>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Vitis vinifera]
Length = 1045
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 159/358 (44%), Gaps = 41/358 (11%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMV 128
F ++ T+++++ ++ + +D + +EM +V D T+ I + + +V L++
Sbjct: 476 FIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQAR 535
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKT-LCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGY 187
+F M GC ++ ++ L RK+ + + LSE PN + Y LI G+
Sbjct: 536 KWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGH 595
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C G + +A +I+ M P +D+ +FKI DD ++ D
Sbjct: 596 CKSGQIEKACQIYARMRGNADIPDVDM-------YFKI--DDGNIR-----------DPN 635
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
+ TY ++D +CK K+ +A +L+ M G E +++ ++I G G+L EA V
Sbjct: 636 IFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFT 695
Query: 308 EIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKR 363
++ + P++ Y LI L + +R A +V M++ C P + Y ++ G L K
Sbjct: 696 KMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDG-LCKV 754
Query: 364 GR-------------KGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRF 408
G+ KG P V T + G KAGK +D + R M P F
Sbjct: 755 GKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGK-VDKCLELMRQMGAKGCAPNF 811
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 95/187 (50%), Gaps = 5/187 (2%)
Query: 175 PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKV 234
PN YG L+ G C + EA + ++M+ EG EP+ V D +I+ F K+ K DEA V
Sbjct: 634 PNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMV 693
Query: 235 FQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLL 294
F M +R + TY +ID + K ++ A +L M + + + + +I GL
Sbjct: 694 FTKMS-ERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLC 752
Query: 295 ARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMH 350
G+ EAY+++ +E+ P++ Y +I G + + + ++ R+M +GC P
Sbjct: 753 KVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFV 812
Query: 351 TYIMLLQ 357
TY +L+
Sbjct: 813 TYRVLIN 819
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 133/308 (43%), Gaps = 25/308 (8%)
Query: 70 FAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRR----LVNDKTFKIALMTLAEVRELK 125
F +++ + +M+ + ++ LF E + + R R + N T++I L R+L
Sbjct: 295 FKLDTVIYTQMISGLCEA---SLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLG 351
Query: 126 KMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLI 184
+ +M GC S + N ++ C+ A L+ K+ + +P + Y LI
Sbjct: 352 RCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILI 411
Query: 185 KGYC--------DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF- 235
G C DV +L E K + M D + V + K ++A +
Sbjct: 412 GGICGNEKLPSLDVLELAE--KAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIR 469
Query: 236 QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
+MM + D STY VI +C K+ A+ + EEM + D T + +I
Sbjct: 470 EMMSKGFIPDT--STYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCK 527
Query: 296 RGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
G L++A K +E+ + P++ Y LI L+ R+ A ++F M+ GC P + T
Sbjct: 528 VGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVT 587
Query: 352 YIMLLQGH 359
Y L+ GH
Sbjct: 588 YTALIDGH 595
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 108/243 (44%), Gaps = 40/243 (16%)
Query: 155 QRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDV 214
++L + K L L PN I Y +I G C VG EA ++ ++M ++G P++
Sbjct: 719 DKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVT 778
Query: 215 VDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEM 274
MI+ F K K D+ +++ + M K TYR++I+ C G + A+ +L+EM
Sbjct: 779 YTAMIDGFGKAGKVDKCLELMRQMGAKGCAP-NFVTYRVLINHCCAAGLLDDAHQLLDEM 837
Query: 275 -----------FKRGIE----------------ADNLTLSSI------IYGLLARGRLRE 301
+++ IE A+N+ + I I GRL
Sbjct: 838 KQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLEL 897
Query: 302 AYKVVEEIEK------PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIML 355
A ++ +E+ D LY LI+ L + +A +++ +MIKRG P + + L
Sbjct: 898 ALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYL 957
Query: 356 LQG 358
++G
Sbjct: 958 VKG 960
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 133/290 (45%), Gaps = 25/290 (8%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAE 120
+T+ ++ + N T++ ++D + K + +DL + L M + ++ L +
Sbjct: 694 FTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCK 753
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIA 179
V + + +M + GC ++ ++ + V + L+ ++ ++ PN +
Sbjct: 754 VGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVT 813
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
Y LI C G L +A ++ + M + + K+IE F N++ ++
Sbjct: 814 YRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF---NRE-------FIIS 863
Query: 240 VKRMDDLG-------LSTYRIVIDWMCKRGKISQAYTMLEEMFK--RGIEADNLTLSSII 290
+ +D++ + YRI+ID CK G++ A + +EM AD SS+I
Sbjct: 864 LGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLI 923
Query: 291 YGLLARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQV 336
L ++ +A+++ ++ K P++S++ L+KGL+R+ R EA Q+
Sbjct: 924 ESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQL 973
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 106/286 (37%), Gaps = 43/286 (15%)
Query: 147 NKVVKTLCQRKLVVEAKYLILKL-SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTD 205
+++ LC+ L EA + ++ S PN + Y L+ G L +I ++M
Sbjct: 303 TQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMIT 362
Query: 206 EGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKR 261
EG PS + + +I + + A K+ +K+M D G Y I+I +C
Sbjct: 363 EGCYPSRRIFNSLIHAYCRSGDYSYAYKL-----LKKMGDCGCQPGYVVYNILIGGICGN 417
Query: 262 GKISQ------AYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK---- 311
K+ A EM + + + +S++ L G+ +AY ++ E+
Sbjct: 418 EKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFI 477
Query: 312 PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPL 371
PD S Y +I L + A +F EM P + TY
Sbjct: 478 PDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTY------------------- 518
Query: 372 VNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYY 417
TI + K G A K+ + ++ G Y +H Y
Sbjct: 519 ----TILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAY 560
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 101/274 (36%), Gaps = 58/274 (21%)
Query: 144 EMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNL 202
++LN +++ C+ L A + +L + KP+ + Y L++ + + L A +
Sbjct: 198 KLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHRE 257
Query: 203 MTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRG 262
M+D GF N D + F + +CK G
Sbjct: 258 MSDSGF-----------------NMDGYTLGCF-------------------VHLLCKAG 281
Query: 263 KISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYH 318
+ +A ++E K + D + + +I GL EA + + P++ Y
Sbjct: 282 RWREALALIE---KEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYR 338
Query: 319 GLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH------------LGKRGRK 366
L+ G LR R+ ++ MI GC P+ + L+ + L K G
Sbjct: 339 ILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDC 398
Query: 367 GPDPLVNFDTIFVGGLVKAGK--SLDAAKYVERV 398
G P I +GG+ K SLD + E+
Sbjct: 399 GCQPGYVVYNILIGGICGNEKLPSLDVLELAEKA 432
>gi|410109937|gb|AFV61048.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
pusilla]
Length = 431
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 137/288 (47%), Gaps = 41/288 (14%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
T + L L +++ K + F+ + +CG SL N ++ C+ + A+ + +
Sbjct: 109 TCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAI 168
Query: 170 SEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD 228
++W ++P+ ++Y L+ GY +GDL E ++ + M G +P +I K +K
Sbjct: 169 TKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKM 228
Query: 229 DEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSS 288
D+A ++F M VK + G+ T+ +ID CK+G++ A + + M + + D +T ++
Sbjct: 229 DDANELFDEMLVKGLVPNGV-TFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNT 287
Query: 289 IIYGLLARGRLREAYKVVEEIE----KPD------------------------------- 313
+IYGL +G L++A +++E+ KPD
Sbjct: 288 LIYGLCKKGDLKQANDLIDEMVMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQEN 347
Query: 314 ISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
I L Y LI GL + R+ +A ++ REM+ G +P TY M++
Sbjct: 348 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIIN 395
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 102/215 (47%), Gaps = 6/215 (2%)
Query: 149 VVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEG 207
++ LC+ + +A L + L + + PN + + LI G+C G + A +I+ M +
Sbjct: 218 LINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQS 277
Query: 208 FEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQA 267
P + + +I K +A + M +K + + TY +ID CK G + A
Sbjct: 278 LLPDLITYNTLIYGLCKKGDLKQANDLIDEMVMKGLKPDKI-TYTTLIDGCCKEGDLDTA 336
Query: 268 YTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKG 323
+ + M + I D++ +++I GL GR +A K++ E+ KPD Y +I
Sbjct: 337 FEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINE 396
Query: 324 LLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+ + +++ +EM + G P++ TY +L+ G
Sbjct: 397 FCKKGDVWKGSRLLKEMQRNGHVPSVVTYNVLMNG 431
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 100/256 (39%), Gaps = 75/256 (29%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
N +TF ++D K +DL E + M + L+ D
Sbjct: 246 NGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPD------------------------ 281
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVG 191
L N ++ LC++ + +A LI ++ + +KP++I Y LI G C G
Sbjct: 282 ----------LITYNTLIYGLCKKGDLKQANDLIDEMVMKGLKPDKITYTTLIDGCCKEG 331
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTY 251
DL D FE ++ + I R+DD+ Y
Sbjct: 332 DL-----------DTAFEHRKRMIQENI----------------------RLDDVA---Y 355
Query: 252 RIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK 311
+I +C+ G+ A ML EM G++ D T + II +G + + ++++E+++
Sbjct: 356 TALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSRLLKEMQR 415
Query: 312 ----PDISLYHGLIKG 323
P + Y+ L+ G
Sbjct: 416 NGHVPSVVTYNVLMNG 431
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 108/236 (45%), Gaps = 6/236 (2%)
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYC 188
FF M G + S+ N ++ LC+ + A+ L ++ E P+ + Y LI G+
Sbjct: 43 FFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHG 102
Query: 189 DVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGL 248
+G L E I+ M D +P + + +I F K + +A + M+ + +
Sbjct: 103 KLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKP-NV 161
Query: 249 STYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE 308
TY ID CK G + +A +M + + + T +S+I G L EA K+VEE
Sbjct: 162 VTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEE 221
Query: 309 IEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL 360
I + I L Y L+ GL R +EA +VFR M+ G P TY L+ G +
Sbjct: 222 ILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFI 277
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 146/325 (44%), Gaps = 20/325 (6%)
Query: 93 FWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKT 152
F++ + G +R V T+ I + L + +L+ + F M + G + N ++
Sbjct: 43 FFKDMGAAGIKRSVF--TYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDG 100
Query: 153 LCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPS 211
+ L+ E + ++ + P+ I Y LI +C + +A + + M G +P+
Sbjct: 101 HGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPN 160
Query: 212 IDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTML 271
+ I+ F K EA+K F MR + TY +ID CK G +++A ++
Sbjct: 161 VVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEF-TYTSLIDANCKAGNLAEALKLV 219
Query: 272 EEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRL 327
EE+ + GI+ + +T ++++ GL GR++EA +V + P+ Y L+ G ++
Sbjct: 220 EEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKA 279
Query: 328 RRAREATQVFREMIKRGCEPTMHTYIMLLQG------------HLGKRGRKGPDPLVNFD 375
+ A + +EM ++ +P + Y +L G +G+ G +
Sbjct: 280 KEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIY 339
Query: 376 TIFVGGLVKAGKSLDAAKYVERVMN 400
T + K+G++ +A +E +++
Sbjct: 340 TTLMDAYFKSGQATEALTLLEEMLD 364
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 93/430 (21%), Positives = 179/430 (41%), Gaps = 54/430 (12%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAE 120
+TQ + F + +T+N ++D GK +D ++M D T+ + +
Sbjct: 79 FTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCK 138
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEA-KYLILKLSEWIKPNEIA 179
+ K F H M G + ++ + + C+ ++ EA K+ + + PNE
Sbjct: 139 FERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFT 198
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
Y LI C G+L EA K+ + G + ++ +++ + + EA +VF+ M
Sbjct: 199 YTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAML 258
Query: 240 VKRMDDLGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
+ G++ TY ++ K ++ A +L+EM ++ I+ D L +I++GL
Sbjct: 259 -----NAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCN 313
Query: 296 RGRLREAYKVVEEIEKPDIS----LYHGLIKGLLRLRRARE------------------- 332
RL EA ++ EI++ I+ +Y L+ + +A E
Sbjct: 314 ESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCKNN 373
Query: 333 ----ATQVFREMIKRGCEPTMHTYIMLLQGH---------LGKRGRK---GPDPLVNFDT 376
A ++F EM+ +G P Y L+ G+ L R R G + ++ T
Sbjct: 374 CFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYT 433
Query: 377 IFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN----EEGVVMFEEVGKK 432
+ GL +G+ A ++ ++ +GV Y + Y +E + + E+ K+
Sbjct: 434 ALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKR 493
Query: 433 LREVGLADLA 442
GL+D A
Sbjct: 494 GMITGLSDHA 503
>gi|242078797|ref|XP_002444167.1| hypothetical protein SORBIDRAFT_07g011860 [Sorghum bicolor]
gi|241940517|gb|EES13662.1| hypothetical protein SORBIDRAFT_07g011860 [Sorghum bicolor]
Length = 520
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 130/278 (46%), Gaps = 10/278 (3%)
Query: 85 GKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLE 144
GK+R DL W ++ M R ++ + I + A E+ K V F +M E
Sbjct: 147 GKARRFDLAWAVVRRMRNRGVLTGRAMVILMERYAAANEVNKAVKTFDVMEKFKVESDQS 206
Query: 145 MLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDV-GDLIEASKIWNLM 203
+ +++ LC+ K + +A+ L+L ++ + + ++ G+C+V DL EA ++W M
Sbjct: 207 VFYSLLRALCKSKNIEDAEELLLLRKKFFPLSAEGFNIILDGWCNVITDLAEAKRVWREM 266
Query: 204 TDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGK 263
++ P MI F K+ + ++V+ M+ KR G+ Y ++ + +
Sbjct: 267 SNHCITPDGMSYTLMISCFSKVGSLFDTLRVYDEMK-KRGWIPGIGVYNSLVYVLTRENC 325
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHG 319
+ A+ + ++ G++ D T +S+I L +L EA V+E + P IS YH
Sbjct: 326 VKDAHNIFSKLTDEGLQPDVETYNSMIVPLCESCKLDEARVVMESMILKGIVPTISTYHA 385
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
+K E+ ++ ++M + GC P T++ML
Sbjct: 386 FLKQ----EGIDESLKLLQKMKEDGCGPKSDTFLMLFD 419
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 97/224 (43%), Gaps = 7/224 (3%)
Query: 62 YTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVND-KTFKIALMTLAE 120
+ + + C + +++ M+ K ++ EM +R + + + L
Sbjct: 263 WREMSNHCITPDGMSYTLMISCFSKVGSLFDTLRVYDEMKKRGWIPGIGVYNSLVYVLTR 322
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIA 179
+K N F + D G + +E N ++ LC+ + EA+ ++ + + I P
Sbjct: 323 ENCVKDAHNIFSKLTDEGLQPDVETYNSMIVPLCESCKLDEARVVMESMILKGIVPTIST 382
Query: 180 YGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMR 239
Y +K + E+ K+ M ++G P D + + FF +N+ A++V+ MR
Sbjct: 383 YHAFLKQE----GIDESLKLLQKMKEDGCGPKSDTFLMLFDKFFLLNESGNALRVWNEMR 438
Query: 240 VKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADN 283
++ + S Y V++ + K G I +A +EM ++G +D
Sbjct: 439 KYKISPVR-SHYMTVVEGLVKHGCIPRALEYYDEMKEKGFASDT 481
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 159/352 (45%), Gaps = 33/352 (9%)
Query: 90 IDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKV 149
I+LF E ++E G N T+ + + + + +L++ M + G S+ N +
Sbjct: 94 INLFSE-MRERGCEP--NIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNAL 150
Query: 150 VKTLCQRKLVVEAKYLILKL--SEWIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEG 207
+ C+ +V EA IL L S PNE Y LI G+C ++ A + + M +
Sbjct: 151 IDGYCKEGMV-EAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESR 209
Query: 208 FEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLS----TYRIVIDWMCKRGK 263
PS+ + +I KI D A ++ +M ++ G+ TY + ID +CK+G+
Sbjct: 210 LTPSVVTYNSLIHGQCKIGYLDSAYRLLNLM-----NENGVVPDQWTYSVFIDTLCKKGR 264
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHG 319
I +A + + ++GI+A+ + +++I G G++ +A +++ + P+ S Y+
Sbjct: 265 IEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNA 324
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRG-------------RK 366
LI GL + R+ +EA + MI++G + T+ TY +L+ L K G
Sbjct: 325 LIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAML-KEGDFDYAHRILDQMVSS 383
Query: 367 GPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYS 418
G P V T F+ G +A + + RGV Y + Y
Sbjct: 384 GYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYG 435
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 145/365 (39%), Gaps = 72/365 (19%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N T+N ++ + +N+ L +M RL T+ + ++ L
Sbjct: 178 NERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLL 237
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
++MN+ G + + TLC++ + EA L L E IK NE+ Y LI GYC
Sbjct: 238 NLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKA 297
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G + +A+ + + M E P+ + +I+ K K EA+ + + M +++ + T
Sbjct: 298 GKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESM-IQKGLKCTVPT 356
Query: 251 YRIVIDWM-----------------------------------CKRGKISQAYTMLEEMF 275
Y I+I M C RG I +A M+ MF
Sbjct: 357 YTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMF 416
Query: 276 KRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLL------ 325
+RG+ D LT + +I G L A+ V++ + P Y LIK LL
Sbjct: 417 ERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTK 476
Query: 326 -----------------------RLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGK 362
++ + A ++F +M++ GC P ++TY L+ G L K
Sbjct: 477 KYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIG-LCK 535
Query: 363 RGRKG 367
GR G
Sbjct: 536 VGRLG 540
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 131/287 (45%), Gaps = 37/287 (12%)
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
NE++Y LI G C+VG + E I+ M ++ P++ ++ F+ + EA+ +F
Sbjct: 38 NEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLF 97
Query: 236 QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
MR +R + + TY ++I+ MCK K+ + +L+EM ++G+ T +++I G
Sbjct: 98 SEMR-ERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCK 156
Query: 296 RGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
G + A ++++ + P+ Y+ LI G R + A + +M++ P++ T
Sbjct: 157 EGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVT 216
Query: 352 YIMLLQGHLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVP-RFDY 410
Y L+ G K G LD+A + +MN VP ++ Y
Sbjct: 217 YNSLIHGQ-----------------------CKIG-YLDSAYRLLNLMNENGVVPDQWTY 252
Query: 411 NKFLHYYSN----EEGVVMF---EEVGKKLREVGLADLADIFQRYGK 450
+ F+ EE V+F +E G K EV L D + + GK
Sbjct: 253 SVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGK 299
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 155/389 (39%), Gaps = 53/389 (13%)
Query: 101 GRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVV 160
G RR N+ ++ + L EV + + +N F M + C ++ +V L + +
Sbjct: 34 GCRR--NEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRM 91
Query: 161 EAKYLILKLSE-WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMI 219
EA L ++ E +PN Y +I C L E +I + M ++G PS+ + +I
Sbjct: 92 EAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALI 151
Query: 220 ETFFKINKDDEAMKVFQMMR-----------------------VKRMDDL---------- 246
+ + K + A ++ +M V R L
Sbjct: 152 DGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLT 211
Query: 247 -GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKV 305
+ TY +I CK G + AY +L M + G+ D T S I L +GR+ EA +
Sbjct: 212 PSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVL 271
Query: 306 VEEIEKPDIS----LYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLG 361
+++ I +Y LI G + + +A + M+ C P TY L+ G
Sbjct: 272 FNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCK 331
Query: 362 KRG------------RKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFD 409
+R +KG V TI + ++K G A + ++++++ G + +
Sbjct: 332 ERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYI 391
Query: 410 YNKFLHYYSNEEGVVMFEEVGKKLREVGL 438
Y F+H + + E++ + E G+
Sbjct: 392 YTAFIHAFCTRGNIKEAEDMMSMMFERGV 420
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 264 ISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIEK----PDISLYHG 319
++ A+++ M K+G + ++ +++I+GL GR+ E + +++ + P + Y
Sbjct: 20 VNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTV 79
Query: 320 LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
++ L R EA +F EM +RGCEP +HTY +++
Sbjct: 80 IVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINA 118
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 142/358 (39%), Gaps = 75/358 (20%)
Query: 73 NSITFNRMVDIIGKSRNID---LFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVN 129
NS T+N ++D + K R + L E++ + G + V T+ I ++ + + +
Sbjct: 318 NSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTV--PTYTILIVAMLKEGDFDYAHR 375
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYC 188
M G + + + + C R + EA+ ++ + E + P+ + Y +I Y
Sbjct: 376 ILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYG 435
Query: 189 DVGDLIEASKIWNLMTDEGFEPS----------------------IDVVDKMIETFF--- 223
+G L A + M D G +PS + + D + FF
Sbjct: 436 GLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADV 495
Query: 224 ----KINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGI 279
K+ K + A+++F+ M ++ ++TY +I +CK G++ A + + M +RG+
Sbjct: 496 ADVWKMMKFETALELFEKM-LEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGV 554
Query: 280 EADNLTLSSI--------IYG--------LLARGRL------------------REAYKV 305
+S+ IYG ++ G L +E KV
Sbjct: 555 SPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKV 614
Query: 306 V-----EEIEKPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
V + D + LI GLL+ + +++ M RGC+ TY ML++G
Sbjct: 615 VFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRMLIEG 672
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 85/184 (46%), Gaps = 10/184 (5%)
Query: 118 LAEVRELKKMVNF------FHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE 171
A+V ++ KM+ F F M + GC ++ K++ LC+ + A+ L ++E
Sbjct: 492 FADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNE 551
Query: 172 -WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDE 230
+ P+E Y L+ C++G +A ++ M + G P ++ ++ + ++ ++
Sbjct: 552 RGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEK 611
Query: 231 AMKVF-QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSI 289
A VF +++ DD ++I+ID + K G +L M RG + T +
Sbjct: 612 AKVVFSNLLQCGYNDDE--VAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRML 669
Query: 290 IYGL 293
I GL
Sbjct: 670 IEGL 673
>gi|15239488|ref|NP_200904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75262710|sp|Q9FME4.1|PP438_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g60960, mitochondrial; Flags: Precursor
gi|10177319|dbj|BAB10645.1| unnamed protein product [Arabidopsis thaliana]
gi|332010020|gb|AED97403.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 521
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 158/355 (44%), Gaps = 23/355 (6%)
Query: 21 SPESRLHSSLSSCNFNLTH-----EFFLQICNNFPLSWRPVYLFFQYTQKAQPCFAHNSI 75
+P++ + N + +H + LQ N P + R F ++ + F+H
Sbjct: 86 NPDAESQTISQRFNLSFSHITPNPDLILQTLNLSPEAGRAALGFNEWLD-SNSNFSHTDE 144
Query: 76 TFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIM- 134
T + VD G+ ++ E + + + + KT + A+ L K++ +FF M
Sbjct: 145 TVSFFVDYFGRRKDFKGMLEIISKY--KGIAGGKTLESAIDRLVRAGRPKQVTDFFEKME 202
Query: 135 NDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKGYCDVGDLI 194
ND G + E L VVK LC++ A+ ++ + I P+E LI G+C L
Sbjct: 203 NDYGLKRDKESLTLVVKKLCEKGHASIAEKMVKNTANEIFPDENICDLLISGWCIAEKLD 262
Query: 195 EASKIWNLMTDEGFEPSIDVVDKMIETFFKI--NKD-----DEAMKVFQMMRVKRMDDLG 247
EA+++ M+ GFE + M++ K+ KD E KV M + +
Sbjct: 263 EATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPR-N 321
Query: 248 LSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVE 307
T+ ++I+ +CK + +A T+ M + G + D T +I L R+ E ++++
Sbjct: 322 TETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMID 381
Query: 308 EIEKP------DISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLL 356
+++ + Y+G +K L + R A VF+ M GC+P + TY +L+
Sbjct: 382 KMKSAGYGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLM 436
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 68/145 (46%), Gaps = 4/145 (2%)
Query: 138 GCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEA 196
G + E N ++ LC+ + EA L ++ EW +P+ Y LI+ + E
Sbjct: 317 GVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEG 376
Query: 197 SKIWNLMTDEGFEPSIDVVD--KMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIV 254
++ + M G+ ++ + ++ I + + AM VF+ M+ G+ TY ++
Sbjct: 377 DEMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKP-GIKTYDLL 435
Query: 255 IDWMCKRGKISQAYTMLEEMFKRGI 279
+ MC ++++A + +E K+GI
Sbjct: 436 MGKMCANNQLTRANGLYKEAAKKGI 460
>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
Length = 591
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 134/260 (51%), Gaps = 11/260 (4%)
Query: 107 NDKTFKIALMTLAEVRELKKMVNFFH-IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYL 165
N+ TF + L ++K V+ F ++ + CE + M V+ LC++ +A +
Sbjct: 141 NEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKA-FD 199
Query: 166 ILKLSEW--IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFF 223
+L+L E KPN Y +I +C G L A+ + N M + P I +I+
Sbjct: 200 LLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALC 259
Query: 224 KINKDDEAMKVF-QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEAD 282
K+++ + +F +M+ + ++ T+ VID +CK GK+ A ++ M ++G++ D
Sbjct: 260 KLSQWENVRTLFLEMIHLNIYPNV--CTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPD 317
Query: 283 NLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFR 338
+T + II G RG++ A ++ + + +PDI Y+ LI G R ++ EA QV R
Sbjct: 318 VITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCR 377
Query: 339 EMIKRGCEPTMHTYIMLLQG 358
E+ ++G +P++ T +LL G
Sbjct: 378 EISQKGLKPSIVTCNVLLHG 397
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 126/274 (45%), Gaps = 7/274 (2%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFKIALMTLAEVRELKKMVNFF 131
N TFN ++D + K ++ E ++ M + + D T+ + + ++ + F
Sbjct: 282 NVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIF 341
Query: 132 HIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGWLIKGYCDV 190
M + E + N ++ ++K + EA + ++S+ +KP+ + L+ G ++
Sbjct: 342 DSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFEL 401
Query: 191 GDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLST 250
G A ++ M G P + ++ +FK +EAM F + +R +D +
Sbjct: 402 GRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLE-RRREDTNIQI 460
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE 310
Y VID +CK GK+ +A+ E++ G+ D +T +++I G G L EA ++ ++E
Sbjct: 461 YTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKME 520
Query: 311 K----PDISLYHGLIKGLLRLRRAREATQVFREM 340
D Y+ +++G LR + E E+
Sbjct: 521 DNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEI 554
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 89/394 (22%), Positives = 163/394 (41%), Gaps = 58/394 (14%)
Query: 62 YTQKA--------QPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDK-TFK 112
+TQKA Q N+ T+ ++D K +D L EM ++ + D T+
Sbjct: 193 HTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYS 252
Query: 113 IALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE- 171
+ L ++ + + + F M ++ N V+ LC+ V +A+ ++ + E
Sbjct: 253 TLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEK 312
Query: 172 WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEA 231
+ P+ I Y +I GY G + A +I++ M ++ EP I + +I + + K DEA
Sbjct: 313 GVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEA 372
Query: 232 MKV-----------------------FQMMRVKRMDDL-----------GLSTYRIVIDW 257
M+V F++ R K + L T+ ++
Sbjct: 373 MQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGG 432
Query: 258 MCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPD 313
K G + +A + ++ +R + + +++I GL G+L +A+ E++ PD
Sbjct: 433 YFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPD 492
Query: 314 ISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKGPDPLVN 373
+ Y +I G + EA + R+M GC TY ++++G L R K +
Sbjct: 493 VITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFL--RSNKVSEMKAF 550
Query: 374 FDTIFVGGLVKAGKSLD-AAKYVERVMNRGVEVP 406
+ I AGKS A VE +M+ E P
Sbjct: 551 LEEI-------AGKSFSFEAATVELLMDIIAEDP 577
>gi|449442465|ref|XP_004139002.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g47360-like [Cucumis sativus]
gi|449505643|ref|XP_004162530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g47360-like [Cucumis sativus]
Length = 475
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 179/373 (47%), Gaps = 32/373 (8%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRR-LVNDKTFKIALMT 117
FF + + QP + H+S ++R ++IG + + L + +++ R LV+ + FKI L
Sbjct: 80 FFIWAGR-QPNYRHSSFMYSRACELIGINVSPCLLFNVIEDYRREGCLVDIRMFKIILNL 138
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL-SEWIKPN 176
E + K+ ++ M++ M N V++ ++ + +A L+ ++ S I PN
Sbjct: 139 CKEAKLAKEALSILRKMSEFHLRADTTMYNLVIRLFTEKGEMDKAMELMKEMDSVDIHPN 198
Query: 177 EIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQ 236
I Y ++KG+CDVG +A ++ M + G P+ V ++ ++ D M++
Sbjct: 199 MITYISMLKGFCDVGRWEDAYGLFKDMKENGCAPNTVVYSVLVNGAIRLRIMDRLMEM-- 256
Query: 237 MMRVKRMDDLGLS------TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSII 290
+K M+ G + TY +I +C+ G +A +L+ M + G + + +S ++
Sbjct: 257 ---LKEMEKQGGTCSPNTVTYTSIIQSLCEEGHPLEALKVLDRMEEYGYAPNRVAVSFLV 313
Query: 291 YGLLARGRLREAYKVVEE-IEKPDIS---LYHGLIKGLLRLRRAREATQVFREMIKRGCE 346
G + EAYK+++ + + +S Y L+ L+++++ EA ++FR M+ G +
Sbjct: 314 KEFCKDGHVEEAYKLIDRVVARGGVSYGDCYSSLVVTLVKMKKIAEAEKLFRNMLANGVK 373
Query: 347 PT-MHTYIMLLQGHLGKRGRKGPDPLVNFD-------------TIFVGGLVKAGKSLDAA 392
P + +M+ + L +R G + D ++ + GL + S+DAA
Sbjct: 374 PDGVACSLMIRELCLEERVLDGFNLCYEVDRNGYLCSIDADIYSLLLVGLCEHDHSVDAA 433
Query: 393 KYVERVMNRGVEV 405
K ++ +G+ +
Sbjct: 434 KLARLMLKKGIRL 446
>gi|224058846|ref|XP_002299640.1| predicted protein [Populus trichocarpa]
gi|222846898|gb|EEE84445.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 161/387 (41%), Gaps = 23/387 (5%)
Query: 69 CFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMV 128
CF +++T++ +V K D EM L L+ + +K +
Sbjct: 198 CFP-DTMTYSVLVSAFVKLGRDDYAIRLFDEMKANGLHPTAKIYTTLLAIYFKSGDEKAL 256
Query: 129 NFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILK-LSEWIKPNEIAYGWLIKGY 187
M D GC ++ +++K L + V +A + L L + KP+ + LI +
Sbjct: 257 GLVQEMKDKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIF 316
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKD-DEAMKVFQMMRVKRMDDL 246
G L +A K+++ M P++ + +I+ F+ EA F+ M+ +
Sbjct: 317 GKAGRLEDALKLFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAASWFEKMKANGVTPS 376
Query: 247 GLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVV 306
TY I+ID CK ++ +A +LEEM ++G S+I L R A ++
Sbjct: 377 SF-TYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELF 435
Query: 307 EEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG---- 358
E++ + +Y +IK L + R EA +F EM K GC P ++ Y L+ G
Sbjct: 436 LELKENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRA 495
Query: 359 --------HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDY 410
L G P +N I + GL + G+ A + ++ + ++ Y
Sbjct: 496 GMIEEAFSALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVSY 555
Query: 411 NKFLHYYSNEEGVVMFEEVGKKLREVG 437
N L S MFEE K +RE+G
Sbjct: 556 NTILGSLSRSG---MFEEAAKLMREMG 579
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 143/310 (46%), Gaps = 14/310 (4%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRR--LVNDKTFKIALM 116
FF++ K + F H+ T+ ++ + W+ +QEM R ++ +
Sbjct: 81 FFKWAGKRRN-FEHDLTTYMPLIRCLDDCGLFGEMWKMIQEMVRSPTCVIGPADLSEVVK 139
Query: 117 TLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQ---RKLVVEAKYLILKLSEWI 173
L + + + K ++ F+ + C+ + N ++ L Q + + E + + +
Sbjct: 140 ILGKAKMVNKALSVFYQIKSRKCKPTASTYNSMILMLMQEGHHEKIHELYHEMCNEGDCF 199
Query: 174 KPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMK 233
P+ + Y L+ + +G A ++++ M G P+ + ++ +FK + D++A+
Sbjct: 200 -PDTMTYSVLVSAFVKLGRDDYAIRLFDEMKANGLHPTAKIYTTLLAIYFK-SGDEKALG 257
Query: 234 VFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGL 293
+ Q M+ K + TY +I + K G++ AY++ M K G + D + ++++I
Sbjct: 258 LVQEMKDKGCAPT-VFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIF 316
Query: 294 LARGRLREAYKVVEEIEK----PDISLYHGLIKGLLRLRR-AREATQVFREMIKRGCEPT 348
GRL +A K+ +++ P++ Y+ +IK L + A EA F +M G P+
Sbjct: 317 GKAGRLEDALKLFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAASWFEKMKANGVTPS 376
Query: 349 MHTYIMLLQG 358
TY +L+ G
Sbjct: 377 SFTYSILIDG 386
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 136/333 (40%), Gaps = 49/333 (14%)
Query: 71 AHNSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTL-AEVRELKKMVN 129
A T+ ++ +GKS ++ + M + D L+ + + L+ +
Sbjct: 268 APTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIFGKAGRLEDALK 327
Query: 130 FFHIMNDCGCEYSLEMLNKVVKTLCQRKL-VVEAKYLILKL-SEWIKPNEIAYGWLIKGY 187
F M C ++ N V+K L + K EA K+ + + P+ Y LI G+
Sbjct: 328 LFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAASWFEKMKANGVTPSSFTYSILIDGF 387
Query: 188 CDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG 247
C + +A + M ++GF P +I K + + A ++F ++ ++ G
Sbjct: 388 CKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFLELK----ENCG 443
Query: 248 LST---YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYK 304
S+ Y ++I + K G+ S+A + EM K G D ++++ GL+ G + EA+
Sbjct: 444 RSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRAGMIEEAFS 503
Query: 305 VVEEIEK----PDISLYHGLIKGLLRLRRAREATQVF----------------------- 337
+ +E+ PD++ ++ ++ GL R R +AT++F
Sbjct: 504 ALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVSYNTILGSLS 563
Query: 338 ------------REMIKRGCEPTMHTYIMLLQG 358
REM RG E TY +L+
Sbjct: 564 RSGMFEEAAKLMREMGSRGFEYDHITYSSILEA 596
Score = 41.6 bits (96), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 73/168 (43%), Gaps = 10/168 (5%)
Query: 69 CFAHNSITFNRMVDIIGK----SRNIDLFWETLQEMGRRRLVNDKTFKIALMT-LAEVRE 123
C ++ + M+ +GK S +DLF EM + D ALM+ L
Sbjct: 442 CGRSSARIYAVMIKNLGKCGRPSEAVDLF----NEMKKIGCNPDVYAYNALMSGLVRAGM 497
Query: 124 LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSE-WIKPNEIAYGW 182
+++ + M + GC L N ++ L + +A + +K+ + IKP+ ++Y
Sbjct: 498 IEEAFSALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVSYNT 557
Query: 183 LIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDE 230
++ G EA+K+ M GFE ++E K+++DDE
Sbjct: 558 ILGSLSRSGMFEEAAKLMREMGSRGFEYDHITYSSILEAVGKVDEDDE 605
>gi|255660784|gb|ACU25561.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 418
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 140/300 (46%), Gaps = 46/300 (15%)
Query: 104 RLVNDKTFKIALMTLAEVRE-------LKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQR 156
RL + F++ T +V E K + F+ +CG SL N ++ + +
Sbjct: 90 RLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKE 149
Query: 157 KLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVV 215
+ A+ + +++W ++P+ +++ L+ GY +GDL E ++ N M G +P +
Sbjct: 150 GEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTY 209
Query: 216 DKMIETFFKINKDDEAMKVFQMM-----------------------RV-------KRMDD 245
+I K +K D+A ++F M RV K+M
Sbjct: 210 SVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS 269
Query: 246 LGLS----TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLRE 301
LS TY +I +CK+G + QA +++EM +G++ D +T +++I G G L
Sbjct: 270 QSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLET 329
Query: 302 AYKVVEEIEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQ 357
A+K + + K +I L Y LI GL + R+ +A ++ REM+ G +P + TY M++
Sbjct: 330 AFKYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN 389
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 88/208 (42%), Gaps = 38/208 (18%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFH 132
N +TF ++D K+ +DL E ++M + L D
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPD------------------------ 275
Query: 133 IMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS-EWIKPNEIAYGWLIKGYCDVG 191
L N ++ LC++ + +A+ LI ++S + +KP++I Y LI G C G
Sbjct: 276 ----------LITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEG 325
Query: 192 DLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF-QMMRVKRMDDLGLST 250
DL A K M E +I + + +A K+ +M+ V ++G T
Sbjct: 326 DLETAFKYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG--T 383
Query: 251 YRIVIDWMCKRGKISQAYTMLEEMFKRG 278
Y ++I+ CK+G + +L+EM + G
Sbjct: 384 YTMIINEFCKKGDVWTGSKLLKEMQRDG 411
>gi|414587035|tpg|DAA37606.1| TPA: hypothetical protein ZEAMMB73_100135 [Zea mays]
Length = 547
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 123/260 (47%), Gaps = 8/260 (3%)
Query: 110 TFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKL 169
+F + + + + +K + M + GC N +V LC+ K V + ++ +L
Sbjct: 217 SFNVVIKGVCRMGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNKGHEVLRRL 276
Query: 170 SE--WIKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINK 227
PN + Y +I GYC G + +A ++N M + G P+ + +I + K
Sbjct: 277 QRDGVCMPNAVTYTSVISGYCKAGKMEDAMSVYNDMLESGTRPNTVTYNVLINGYGKALD 336
Query: 228 DDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLS 287
+ A+++++ + + R + T+ +ID C+ G++ A + +EM I+ + T S
Sbjct: 337 MESAVRMYRQL-ILRHCPPDVVTFSSLIDGYCRCGQLDDAKRIWKEMGLHHIQPNVYTFS 395
Query: 288 SIIYGLLARGRLREAYKVVEEIE-----KPDISLYHGLIKGLLRLRRAREATQVFREMIK 342
II+ L + R EA ++ E+ P +Y+ +I L + + EA + +M +
Sbjct: 396 IIIHSLCKQNRSAEALDILRELNMRTDIAPQTFIYNPVIDILCKGGKVDEANLIVTDMKE 455
Query: 343 RGCEPTMHTYIMLLQGHLGK 362
+GC P +TY +L+ GH K
Sbjct: 456 KGCHPDKYTYTILIIGHCMK 475
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 132/277 (47%), Gaps = 17/277 (6%)
Query: 73 NSITFNRMVDIIGKSRNIDLFWETLQEMGRRRLV--NDKTFKIALMTLAEVRELKKMVNF 130
++IT N +VD + +++ ++ E L+ + R + N T+ + + +++ ++
Sbjct: 249 DTITHNILVDGLCRAKQVNKGHEVLRRLQRDGVCMPNAVTYTSVISGYCKAGKMEDAMSV 308
Query: 131 FHIMNDCGCEYSLEMLNKVV----KTLCQRKLVVEAKYLILKLSEWIKPNEIAYGWLIKG 186
++ M + G + N ++ K L V + LIL+ P+ + + LI G
Sbjct: 309 YNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILR---HCPPDVVTFSSLIDG 365
Query: 187 YCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDL 246
YC G L +A +IW M +P++ +I + K N+ EA+ + + + ++ D+
Sbjct: 366 YCRCGQLDDAKRIWKEMGLHHIQPNVYTFSIIIHSLCKQNRSAEALDILRELNMR--TDI 423
Query: 247 GLST--YRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREA-- 302
T Y VID +CK GK+ +A ++ +M ++G D T + +I G +GR+ EA
Sbjct: 424 APQTFIYNPVIDILCKGGKVDEANLIVTDMKEKGCHPDKYTYTILIIGHCMKGRIPEAIT 483
Query: 303 --YKVVEEIEKPDISLYHGLIKGLLRLRRAREATQVF 337
+K+VE +PD + + +L+ E Q+
Sbjct: 484 LFHKMVEAGCRPDNITVNSFVSCVLKAGMPNEVDQIM 520
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 100/215 (46%), Gaps = 10/215 (4%)
Query: 162 AKYLILKLSEWIK-----PNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVD 216
A+ + WI+ P+ ++ +IKG C +G+ +A ++ MT+ G P +
Sbjct: 195 AQDAVALFESWIQDGLYSPDVWSFNVVIKGVCRMGNFQKALELVERMTEFGCSPDTITHN 254
Query: 217 KMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFK 276
+++ + + ++ +V + ++ + TY VI CK GK+ A ++ +M +
Sbjct: 255 ILVDGLCRAKQVNKGHEVLRRLQRDGVCMPNAVTYTSVISGYCKAGKMEDAMSVYNDMLE 314
Query: 277 RGIEADNLTLSSIIYGLLARGRLREAYKVVEEI----EKPDISLYHGLIKGLLRLRRARE 332
G + +T + +I G + A ++ ++ PD+ + LI G R + +
Sbjct: 315 SGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRHCPPDVVTFSSLIDGYCRCGQLDD 374
Query: 333 ATQVFREMIKRGCEPTMHTYIMLLQGHLGKRGRKG 367
A ++++EM +P ++T+ +++ L K+ R
Sbjct: 375 AKRIWKEMGLHHIQPNVYTFSIIIHS-LCKQNRSA 408
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 109/272 (40%), Gaps = 37/272 (13%)
Query: 210 PSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLG----LSTYRIVIDWMCKRGKIS 265
PS +I + + +A+K+F M MD G + V G +
Sbjct: 106 PSEQSYIHVIAFLCRSGRHRDALKLFDQM----MDQSGYLPEAGFFSFVAGSCTNAGLLD 161
Query: 266 QAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEE-----IEKPDISLYHGL 320
A T+L + + G + + ++ L+A GR ++A + E + PD+ ++ +
Sbjct: 162 AASTLLTKGSRLGCCIEPYAYNYLLNSLIAHGRAQDAVALFESWIQDGLYSPDVWSFNVV 221
Query: 321 IKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGHL-GKRGRKGPDPLVNFD---- 375
IKG+ R+ ++A ++ M + GC P T+ +L+ G K+ KG + L
Sbjct: 222 IKGVCRMGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNKGHEVLRRLQRDGV 281
Query: 376 --------TIFVGGLVKAGKSLDAAKYVERVMNRGVEVPRFDYNKFLHYYSN----EEGV 423
T + G KAGK DA ++ G YN ++ Y E V
Sbjct: 282 CMPNAVTYTSVISGYCKAGKMEDAMSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAV 341
Query: 424 VMFEEVGKKLRE-----VGLADLADIFQRYGK 450
M+ ++ LR V + L D + R G+
Sbjct: 342 RMYRQL--ILRHCPPDVVTFSSLIDGYCRCGQ 371
>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 616
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 125/273 (45%), Gaps = 9/273 (3%)
Query: 91 DLFWETLQEMGRRRLVNDKTFKIALMTLAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVV 150
DL E QE ++D TF I + + + +++ M + GC + V+
Sbjct: 314 DLLAEMFQE---DCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVI 370
Query: 151 KTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFE 209
C+ LV EA L+ +S KPN I+Y ++KG C ++A ++ + M +G
Sbjct: 371 NGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCL 430
Query: 210 PSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYT 269
P+ + +I K ++A+++ + M V L +Y VID + K GK +A
Sbjct: 431 PNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSP-DLISYSTVIDGLGKAGKTEEALE 489
Query: 270 MLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLL 325
+L M +GI + + SS+ L GR + ++ + I+ + D +LY+ +I L
Sbjct: 490 LLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLC 549
Query: 326 RLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+ A F M+ GC P TY +L++G
Sbjct: 550 KRWETDRAIDFFAYMVSNGCMPNESTYTILIRG 582
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 154/332 (46%), Gaps = 45/332 (13%)
Query: 121 VRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRK-------LVVEAKYLILKLSEW- 172
V L+K+ +F GCE + N V+K LC K L+VE + LS+
Sbjct: 198 VELLRKLPSF-------GCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMP 250
Query: 173 ---IKPNEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDD 229
P+ Y +I G C G A+ I + M G +P++ + +++ + +
Sbjct: 251 EHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWE 310
Query: 230 EAMKVFQMMRVK--RMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLS 287
EA + M + +DD+ T+ I++D+ C+ G + + +LE+M + G D +T +
Sbjct: 311 EAEDLLAEMFQEDCPLDDV---TFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYT 367
Query: 288 SIIYGLLARGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKR 343
++I G G + EA +++ + KP+ Y ++KGL R R +A ++ MI++
Sbjct: 368 TVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQ 427
Query: 344 GCEPTMHTYIMLLQGHLGKRGRK---------------GPDPLVNFDTIFVGGLVKAGKS 388
GC P T+ L+ + K+G PD L+++ T+ + GL KAGK+
Sbjct: 428 GCLPNPVTFNTLIN-FMCKKGLAEQAIELLKQMLVNGCSPD-LISYSTV-IDGLGKAGKT 484
Query: 389 LDAAKYVERVMNRGVEVPRFDYNKFLHYYSNE 420
+A + + ++N+G+ Y+ S E
Sbjct: 485 EEALELLNVMINKGITPNTIIYSSMASALSRE 516
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 130/309 (42%), Gaps = 43/309 (13%)
Query: 125 KKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLSEW-IKPNEIAYGWL 183
+ V +++ GC N VV +C++ V E L+ KL + +P+ ++Y +
Sbjct: 160 RSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAV 219
Query: 184 IKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVFQMMRVKRM 243
+KG C +K W+ DV + M+E + EA+ QM
Sbjct: 220 LKGLC-------MAKRWD-----------DVEELMVEMV----RVHEALS--QMPEHGCT 255
Query: 244 DDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAY 303
DL + Y +ID +CK G A +L M G++ + + ++++ GL + R EA
Sbjct: 256 PDLRM--YATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAE 313
Query: 304 KVVEEIEKPDISL----YHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQGH 359
++ E+ + D L ++ L+ + ++ +M++ GC P + TY ++ G
Sbjct: 314 DLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGF 373
Query: 360 ------------LGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVMNRGVEVPR 407
L G P TI + GL +A + +DA + + ++ +G
Sbjct: 374 CKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNP 433
Query: 408 FDYNKFLHY 416
+N +++
Sbjct: 434 VTFNTLINF 442
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 4/113 (3%)
Query: 250 TYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLARGRLREAYKVVEEI 309
TY ++ +C RG I+ A T+L+EM RG A I+ G R A + ++ +
Sbjct: 110 TYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVL 169
Query: 310 EKPDISLYHG----LIKGLLRLRRAREATQVFREMIKRGCEPTMHTYIMLLQG 358
+L G ++ + E ++ R++ GCEP + +Y +L+G
Sbjct: 170 HAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKG 222
>gi|3193306|gb|AAC19289.1| contains similarity to Arabidopsis membrane-associated
salt-inducible-like protein (GB:AL021637) [Arabidopsis
thaliana]
Length = 991
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 156/363 (42%), Gaps = 56/363 (15%)
Query: 59 FFQYTQKAQPCFAHNSITFNRMVDIIGKSRNIDLFWETL-QEMGRRRLVNDKTFKIALMT 117
F Y + QP F H+ + ++ +G+ R +L + L + + + F +
Sbjct: 70 IFDYASQ-QPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKV 128
Query: 118 LAEVRELKKMVNFFHIMNDCGCEYSLEMLNKVVKTLCQRKLVVEAKYLILKLS--EWIKP 175
AE + +K+++ F+ M + + LN+++ L + ++ + + K S + P
Sbjct: 129 YAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMP 188
Query: 176 NEIAYGWLIKGYCDVGDLIEASKIWNLMTDEGFEPSIDVVDKMIETFFKINKDDEAMKVF 235
N +Y L++ +C DL A +++ M + P +D
Sbjct: 189 NTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVD---------------------- 226
Query: 236 QMMRVKRMDDLGLSTYRIVIDWMCKRGKISQAYTMLEEMFKRGIEADNLTLSSIIYGLLA 295
+Y+I+I C++G+++ A +L++M +G D L+ ++++ L
Sbjct: 227 --------------SYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCR 272
Query: 296 RGRLREAYKVVEEIE----KPDISLYHGLIKGLLRLRRAREATQVFREMIKRGCEPTMHT 351
+ +LREAYK++ ++ PD+ Y+ +I G R RA +A +V +M+ GC P +
Sbjct: 273 KTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVS 332
Query: 352 YIMLLQG------------HLGKRGRKGPDPLVNFDTIFVGGLVKAGKSLDAAKYVERVM 399
Y L+ G +L + KG P + V G GK +A VE VM
Sbjct: 333 YRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVM 392
Query: 400 NRG 402
G
Sbjct: 393 KNG 395
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.325 0.140 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,945,436,751
Number of Sequences: 23463169
Number of extensions: 278829569
Number of successful extensions: 964271
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3850
Number of HSP's successfully gapped in prelim test: 4261
Number of HSP's that attempted gapping in prelim test: 866966
Number of HSP's gapped (non-prelim): 39072
length of query: 465
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 319
effective length of database: 8,933,572,693
effective search space: 2849809689067
effective search space used: 2849809689067
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 79 (35.0 bits)