BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048274
(329 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P26302|KPPR_WHEAT Phosphoribulokinase, chloroplastic OS=Triticum aestivum PE=2 SV=1
Length = 404
Score = 635 bits (1638), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 299/327 (91%), Positives = 314/327 (96%)
Query: 1 MRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANN 60
MRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDP+AN+
Sbjct: 75 MRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPKAND 134
Query: 61 FDLMYEQVKAMKDGVSVEKPIYNHVTGLLDPPELIKPPKILVIEGLHPMYDARVRELLDF 120
FDLMYEQVKA+K+G ++EKPIYNHVTGLLDP ELI+PPKI VIEGLHPMYD RVRELLDF
Sbjct: 135 FDLMYEQVKAIKEGKAIEKPIYNHVTGLLDPAELIQPPKIFVIEGLHPMYDERVRELLDF 194
Query: 121 SIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEARKPDFDAYIDPQKQYADAVIEVLP 180
SIYLDISNEVKFAWKIQRDM ERGHSLESIKASIEARKPDFDA+IDPQKQYADAVIEVLP
Sbjct: 195 SIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFDAFIDPQKQYADAVIEVLP 254
Query: 181 TQLIPDDNEGKVLRVRLIMKEGVKYFSPVYLFDEGSTIEWIPCGRKLTCSYPGIKFSYGP 240
TQLIPDDNEGKVLRV+LIMKEG+K+F+PVYLFDEGSTI WIPCGRKLTCSYPGIKFSYGP
Sbjct: 255 TQLIPDDNEGKVLRVKLIMKEGIKFFNPVYLFDEGSTINWIPCGRKLTCSYPGIKFSYGP 314
Query: 241 DAYFGHEVSILEMDGKFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHADFPGSNNGTGL 300
D YFG EVS+LEMDG+FDRLDELIYVESHLSNLSTKFYGEVTQQMLKHADFPGSNNGTGL
Sbjct: 315 DTYFGQEVSVLEMDGQFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHADFPGSNNGTGL 374
Query: 301 FQTIVGLKIRDLYEQIITSKAAAPVEA 327
FQTIVGLKIRDLYEQII +A P EA
Sbjct: 375 FQTIVGLKIRDLYEQIIAERAGVPAEA 401
>sp|P25697|KPPR_ARATH Phosphoribulokinase, chloroplastic OS=Arabidopsis thaliana
GN=At1g32060 PE=1 SV=1
Length = 395
Score = 635 bits (1638), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 300/329 (91%), Positives = 317/329 (96%)
Query: 1 MRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANN 60
MRRLTSVFGGAA+PPKGGNPDSNTLISDTTTVICLDDYHSLDR GRKE+ VTALDPRAN+
Sbjct: 67 MRRLTSVFGGAAKPPKGGNPDSNTLISDTTTVICLDDYHSLDRYGRKEQKVTALDPRAND 126
Query: 61 FDLMYEQVKAMKDGVSVEKPIYNHVTGLLDPPELIKPPKILVIEGLHPMYDARVRELLDF 120
FDLMYEQVKA+K+G++VEKPIYNHVTGLLDPPELI+PPKILVIEGLHPM+D RVR+LLDF
Sbjct: 127 FDLMYEQVKALKNGIAVEKPIYNHVTGLLDPPELIQPPKILVIEGLHPMFDERVRDLLDF 186
Query: 121 SIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEARKPDFDAYIDPQKQYADAVIEVLP 180
SIYLDISNEVKFAWKIQRDM ERGHSLESIKASIEARKPDFDA+IDPQKQYADAVIEVLP
Sbjct: 187 SIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFDAFIDPQKQYADAVIEVLP 246
Query: 181 TQLIPDDNEGKVLRVRLIMKEGVKYFSPVYLFDEGSTIEWIPCGRKLTCSYPGIKFSYGP 240
T LIPDDNEGKVLRVRLIMKEGVKYFSPVYLFDEGSTI WIPCGRKLTCSYPGIKF+Y P
Sbjct: 247 TTLIPDDNEGKVLRVRLIMKEGVKYFSPVYLFDEGSTISWIPCGRKLTCSYPGIKFNYEP 306
Query: 241 DAYFGHEVSILEMDGKFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHADFPGSNNGTGL 300
D+YF HEVS+LEMDG+FDRLDELIYVESHLSNLSTKFYGEVTQQMLKHADFPGSNNGTGL
Sbjct: 307 DSYFDHEVSVLEMDGQFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHADFPGSNNGTGL 366
Query: 301 FQTIVGLKIRDLYEQIITSKAAAPVEAKA 329
FQTIVGLKIRDLYEQ+I +KA A EAKA
Sbjct: 367 FQTIVGLKIRDLYEQLIANKATARAEAKA 395
>sp|P27774|KPPR_MESCR Phosphoribulokinase, chloroplastic OS=Mesembryanthemum crystallinum
PE=2 SV=1
Length = 397
Score = 618 bits (1593), Expect = e-176, Method: Compositional matrix adjust.
Identities = 292/317 (92%), Positives = 308/317 (97%)
Query: 1 MRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANN 60
MRRLTSVFGGAAEPP+GGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRAN+
Sbjct: 68 MRRLTSVFGGAAEPPRGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRAND 127
Query: 61 FDLMYEQVKAMKDGVSVEKPIYNHVTGLLDPPELIKPPKILVIEGLHPMYDARVRELLDF 120
FDLMYEQVKA+K+G +VEKPIYNHVTGLLD PELIKPPKILVIEGLHPM+D+RVR+LLDF
Sbjct: 128 FDLMYEQVKALKEGKAVEKPIYNHVTGLLDAPELIKPPKILVIEGLHPMFDSRVRDLLDF 187
Query: 121 SIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEARKPDFDAYIDPQKQYADAVIEVLP 180
SIYLDISNEVKFAWKIQRDM ERGHSLESIKASIEARKPDFDAYIDPQKQYADAVIEVLP
Sbjct: 188 SIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFDAYIDPQKQYADAVIEVLP 247
Query: 181 TQLIPDDNEGKVLRVRLIMKEGVKYFSPVYLFDEGSTIEWIPCGRKLTCSYPGIKFSYGP 240
TQLIP DNEGKVLRVRLI KEGV+YFSPVYLFDEGS+I WIPCGRKLTCSYPGIKF YGP
Sbjct: 248 TQLIPGDNEGKVLRVRLIQKEGVQYFSPVYLFDEGSSITWIPCGRKLTCSYPGIKFFYGP 307
Query: 241 DAYFGHEVSILEMDGKFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHADFPGSNNGTGL 300
D YFG+EV++LEMDG+FDRLDELIYVESHLSNLSTKFYGEVTQQMLKH DFPGSNNGTGL
Sbjct: 308 DTYFGNEVTVLEMDGQFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHQDFPGSNNGTGL 367
Query: 301 FQTIVGLKIRDLYEQII 317
FQTIVGLKIRDL+EQ+I
Sbjct: 368 FQTIVGLKIRDLFEQLI 384
>sp|P09559|KPPR_SPIOL Phosphoribulokinase, chloroplastic OS=Spinacia oleracea PE=1 SV=1
Length = 402
Score = 601 bits (1550), Expect = e-171, Method: Compositional matrix adjust.
Identities = 278/321 (86%), Positives = 308/321 (95%)
Query: 1 MRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANN 60
MRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDD+HSLDR GRK + VTALDP+AN+
Sbjct: 73 MRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDFHSLDRNGRKVEKVTALDPKAND 132
Query: 61 FDLMYEQVKAMKDGVSVEKPIYNHVTGLLDPPELIKPPKILVIEGLHPMYDARVRELLDF 120
FDLMYEQVKA+K+G +V+KPIYNHV+GLLDPPELI+PPKILVIEGLHPMYDARVRELLDF
Sbjct: 133 FDLMYEQVKALKEGKAVDKPIYNHVSGLLDPPELIQPPKILVIEGLHPMYDARVRELLDF 192
Query: 121 SIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEARKPDFDAYIDPQKQYADAVIEVLP 180
SIYLDISNEVKFAWKIQRDM ERGHSLESIKASIE+RKPDFDAYIDPQKQ+AD VIEVLP
Sbjct: 193 SIYLDISNEVKFAWKIQRDMKERGHSLESIKASIESRKPDFDAYIDPQKQHADVVIEVLP 252
Query: 181 TQLIPDDNEGKVLRVRLIMKEGVKYFSPVYLFDEGSTIEWIPCGRKLTCSYPGIKFSYGP 240
T+LIPDD+EGKVLRVR+I KEGVK+F+PVYLFDEGSTI WIPCGRKLTCSYPGIKFSYGP
Sbjct: 253 TELIPDDDEGKVLRVRMIQKEGVKFFNPVYLFDEGSTISWIPCGRKLTCSYPGIKFSYGP 312
Query: 241 DAYFGHEVSILEMDGKFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHADFPGSNNGTGL 300
D ++G+EV+++EMDG FDRLDELIYVESHLSNLSTKFYGEVTQQMLKH +FPGSNNGTG
Sbjct: 313 DTFYGNEVTVVEMDGMFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHQNFPGSNNGTGF 372
Query: 301 FQTIVGLKIRDLYEQIITSKA 321
FQTI+GLKIRDL+EQ++ S++
Sbjct: 373 FQTIIGLKIRDLFEQLVASRS 393
>sp|P19824|KPPR_CHLRE Phosphoribulokinase, chloroplastic OS=Chlamydomonas reinhardtii
GN=PRKA PE=1 SV=1
Length = 375
Score = 528 bits (1361), Expect = e-149, Method: Compositional matrix adjust.
Identities = 249/325 (76%), Positives = 283/325 (87%), Gaps = 2/325 (0%)
Query: 1 MRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANN 60
MRR+TS+FGG +PP GGNPDSNTLISD TTVICLDDYH LDR GRK KGVTAL P A N
Sbjct: 53 MRRMTSIFGGVPKPPAGGNPDSNTLISDMTTVICLDDYHCLDRNGRKVKGVTALAPEAQN 112
Query: 61 FDLMYEQVKAMKDGVSVEKPIYNHVTGLLDPPELIKPPKILVIEGLHPMYDARVRELLDF 120
FDLMY QVKA+K+G SV+KPIYNHV+GL+D PE I+ P ILVIEGLHP YD RV ELLDF
Sbjct: 113 FDLMYNQVKALKEGKSVDKPIYNHVSGLIDAPEKIESPPILVIEGLHPFYDKRVAELLDF 172
Query: 121 SIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEARKPDFDAYIDPQKQYADAVIEVLP 180
IYLDIS+++KFAWKIQRDM ERGHSLESIK+SI ARKPDFDAYIDPQK+ AD +I+VLP
Sbjct: 173 KIYLDISDDIKFAWKIQRDMAERGHSLESIKSSIAARKPDFDAYIDPQKKDADMIIQVLP 232
Query: 181 TQLIPDDNEGKVLRVRLIMKEGVKYFSPVYLFDEGSTIEWIPCGRKLTCSYPGIKFSYGP 240
TQL+PDD +G+ LRVRLIMKEG K F PVYLFDEGSTI WIPCGRKLTCS+PGIK YGP
Sbjct: 233 TQLVPDD-KGQYLRVRLIMKEGSKMFDPVYLFDEGSTISWIPCGRKLTCSFPGIKMFYGP 291
Query: 241 DAYFGHEVSILEMDGKFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHADFPGSNNGTGL 300
D ++G EVS+LEMDG+FD+L+ELIYVESHLSN S KFYGE+TQQMLK++ FPGSNNGTGL
Sbjct: 292 DTWYGQEVSVLEMDGQFDKLEELIYVESHLSNTSAKFYGEITQQMLKNSGFPGSNNGTGL 351
Query: 301 FQTIVGLKIRDLYEQIITSKAAAPV 325
FQTIVGLK+R++YE+I+ K PV
Sbjct: 352 FQTIVGLKVREVYERIV-KKDVVPV 375
>sp|P37101|KPPR_SYNY3 Phosphoribulokinase OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=prk PE=2 SV=1
Length = 332
Score = 454 bits (1167), Expect = e-127, Method: Compositional matrix adjust.
Identities = 213/324 (65%), Positives = 259/324 (79%), Gaps = 19/324 (5%)
Query: 1 MRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANN 60
+RRLT +FG + TVICLDDYHSLDR GRK GVTALDPRANN
Sbjct: 25 LRRLTDLFG-----------------EEFMTVICLDDYHSLDRQGRKAAGVTALDPRANN 67
Query: 61 FDLMYEQVKAMKDGVSVEKPIYNHVTGLLDPPELIKPPKILVIEGLHPMYDARVRELLDF 120
FDLMYEQ+K +K G S+ KPIYNH TGLLDPPE ++P K++VIEGLHP+YD RVREL+DF
Sbjct: 68 FDLMYEQIKTLKSGQSIMKPIYNHETGLLDPPEKVEPNKVVVIEGLHPLYDERVRELVDF 127
Query: 121 SIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEARKPDFDAYIDPQKQYADAVIEVLP 180
+YLDIS EVK WKIQRDM ERGH+ E I ASI ARKPDF AYI+PQKQYAD VI+VLP
Sbjct: 128 GVYLDISEEVKINWKIQRDMAERGHTYEDILASINARKPDFTAYIEPQKQYADVVIQVLP 187
Query: 181 TQLIPDDNEGKVLRVRLIMKEGVKYFSPVYLFDEGSTIEWIPCGRKLTCSYPGIKFSYGP 240
T+LI +D E K+LRVRL+ KEGVK+F P YLFDEGSTI+W PCGRKLTC+YPGIK YGP
Sbjct: 188 TRLI-EDKESKLLRVRLVQKEGVKFFEPAYLFDEGSTIDWRPCGRKLTCTYPGIKMYYGP 246
Query: 241 DAYFGHEVSILEMDGKFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHADFPGSNNGTGL 300
D + G+EVS+LE+DG+F+ L+E++YVE+HLS TK+YGE+T+ +LKH D+PG++NGTGL
Sbjct: 247 DNFMGNEVSLLEVDGRFENLEEMVYVENHLSKTGTKYYGEMTELLLKHKDYPGTDNGTGL 306
Query: 301 FQTIVGLKIRDLYEQIITSKAAAP 324
FQ +VGLK+R +YEQ +T++A P
Sbjct: 307 FQVLVGLKMRKVYEQ-LTAEAKVP 329
>sp|P85112|KPPR_VITSX Phosphoribulokinase, chloroplastic (Fragments) OS=Vitis sp. PE=1
SV=1
Length = 89
Score = 118 bits (296), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/66 (87%), Positives = 60/66 (90%), Gaps = 6/66 (9%)
Query: 4 LTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANNFDL 63
LTSVFGGAAEPP+GGNPDSNTLISDTTTVICLDDYHSLDR GVTALDPRAN+FDL
Sbjct: 1 LTSVFGGAAEPPRGGNPDSNTLISDTTTVICLDDYHSLDR------GVTALDPRANDFDL 54
Query: 64 MYEQVK 69
MYEQVK
Sbjct: 55 MYEQVK 60
Score = 37.4 bits (85), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/18 (94%), Positives = 18/18 (100%)
Query: 259 RLDELIYVESHLSNLSTK 276
+LDELIYVESHLSNLSTK
Sbjct: 72 KLDELIYVESHLSNLSTK 89
Score = 32.0 bits (71), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 12/15 (80%), Positives = 14/15 (93%)
Query: 155 EARKPDFDAYIDPQK 169
+ +KPDFDAYIDPQK
Sbjct: 58 QVKKPDFDAYIDPQK 72
>sp|B5BF73|URK_SALPK Uridine kinase OS=Salmonella paratyphi A (strain AKU_12601) GN=udk
PE=3 SV=1
Length = 213
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 81/123 (65%), Gaps = 2/123 (1%)
Query: 56 PRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGL-LDPPELIKPPKILVIEGLHPMYDARV 114
P A + L+++ ++A+K G ++E P+Y++V + ++P K++++EG+ + DAR+
Sbjct: 69 PNAMDHSLLFQHLQALKRGSAIELPVYSYVEHTRMQETVRVEPKKVIILEGILLLTDARL 128
Query: 115 RELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEAR-KPDFDAYIDPQKQYAD 173
RE ++FSI++D ++ +I+RD+ ERG S++S+ A + +P F +I+P KQYAD
Sbjct: 129 REEMNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYAD 188
Query: 174 AVI 176
++
Sbjct: 189 IIV 191
>sp|Q5PDX6|URK_SALPA Uridine kinase OS=Salmonella paratyphi A (strain ATCC 9150 /
SARB42) GN=udk PE=3 SV=1
Length = 213
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 81/123 (65%), Gaps = 2/123 (1%)
Query: 56 PRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGL-LDPPELIKPPKILVIEGLHPMYDARV 114
P A + L+++ ++A+K G ++E P+Y++V + ++P K++++EG+ + DAR+
Sbjct: 69 PNAMDHSLLFQHLQALKRGSAIELPVYSYVEHTRMQETVRVEPKKVIILEGILLLTDARL 128
Query: 115 RELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEAR-KPDFDAYIDPQKQYAD 173
RE ++FSI++D ++ +I+RD+ ERG S++S+ A + +P F +I+P KQYAD
Sbjct: 129 REEMNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYAD 188
Query: 174 AVI 176
++
Sbjct: 189 IIV 191
>sp|B5RBW3|URK_SALG2 Uridine kinase OS=Salmonella gallinarum (strain 287/91 / NCTC
13346) GN=udk PE=3 SV=1
Length = 213
Score = 89.4 bits (220), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 81/123 (65%), Gaps = 2/123 (1%)
Query: 56 PRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGL-LDPPELIKPPKILVIEGLHPMYDARV 114
P A + L+++ ++A+K G ++E P+Y++V + ++P K++++EG+ + DAR+
Sbjct: 69 PNAMDHSLLFQHLQALKRGSAIELPVYSYVEHTRMQETVRVEPKKVIILEGILLLTDARL 128
Query: 115 RELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEAR-KPDFDAYIDPQKQYAD 173
RE ++FSI++D ++ +I+RD+ ERG S++S+ A + +P F +I+P KQYAD
Sbjct: 129 REEMNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYAD 188
Query: 174 AVI 176
++
Sbjct: 189 IIV 191
>sp|P67408|URK_SALTY Uridine kinase OS=Salmonella typhimurium (strain LT2 / SGSC1412 /
ATCC 700720) GN=udk PE=3 SV=1
Length = 213
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 81/123 (65%), Gaps = 2/123 (1%)
Query: 56 PRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGL-LDPPELIKPPKILVIEGLHPMYDARV 114
P A + L+++ ++A+K G ++E P+Y++V + ++P K++++EG+ + DAR+
Sbjct: 69 PNAMDHSLLFQHLQALKRGSAIELPVYSYVEHTRMQETVRVEPKKVIILEGILLLTDARL 128
Query: 115 RELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEAR-KPDFDAYIDPQKQYAD 173
RE ++FSI++D ++ +I+RD+ ERG S++S+ A + +P F +I+P KQYAD
Sbjct: 129 REEMNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYAD 188
Query: 174 AVI 176
++
Sbjct: 189 IIV 191
>sp|P67409|URK_SALTI Uridine kinase OS=Salmonella typhi GN=udk PE=3 SV=1
Length = 213
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 81/123 (65%), Gaps = 2/123 (1%)
Query: 56 PRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGL-LDPPELIKPPKILVIEGLHPMYDARV 114
P A + L+++ ++A+K G ++E P+Y++V + ++P K++++EG+ + DAR+
Sbjct: 69 PNAMDHSLLFQHLQALKRGSAIELPVYSYVEHTRMQETVRVEPKKVIILEGILLLTDARL 128
Query: 115 RELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEAR-KPDFDAYIDPQKQYAD 173
RE ++FSI++D ++ +I+RD+ ERG S++S+ A + +P F +I+P KQYAD
Sbjct: 129 REEMNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYAD 188
Query: 174 AVI 176
++
Sbjct: 189 IIV 191
>sp|B4TNH9|URK_SALSV Uridine kinase OS=Salmonella schwarzengrund (strain CVM19633)
GN=udk PE=3 SV=1
Length = 213
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 81/123 (65%), Gaps = 2/123 (1%)
Query: 56 PRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGL-LDPPELIKPPKILVIEGLHPMYDARV 114
P A + L+++ ++A+K G ++E P+Y++V + ++P K++++EG+ + DAR+
Sbjct: 69 PNAMDHSLLFQHLQALKRGSAIELPVYSYVEHTRMQETVRVEPKKVIILEGILLLTDARL 128
Query: 115 RELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEAR-KPDFDAYIDPQKQYAD 173
RE ++FSI++D ++ +I+RD+ ERG S++S+ A + +P F +I+P KQYAD
Sbjct: 129 REEMNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYAD 188
Query: 174 AVI 176
++
Sbjct: 189 IIV 191
>sp|C0Q1G0|URK_SALPC Uridine kinase OS=Salmonella paratyphi C (strain RKS4594) GN=udk
PE=3 SV=1
Length = 213
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 81/123 (65%), Gaps = 2/123 (1%)
Query: 56 PRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGL-LDPPELIKPPKILVIEGLHPMYDARV 114
P A + L+++ ++A+K G ++E P+Y++V + ++P K++++EG+ + DAR+
Sbjct: 69 PNAMDHSLLFQHLQALKRGSAIELPVYSYVEHTRMQETVRVEPKKVIILEGILLLTDARL 128
Query: 115 RELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEAR-KPDFDAYIDPQKQYAD 173
RE ++FSI++D ++ +I+RD+ ERG S++S+ A + +P F +I+P KQYAD
Sbjct: 129 REEMNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYAD 188
Query: 174 AVI 176
++
Sbjct: 189 IIV 191
>sp|A9N7M0|URK_SALPB Uridine kinase OS=Salmonella paratyphi B (strain ATCC BAA-1250 /
SPB7) GN=udk PE=3 SV=1
Length = 213
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 81/123 (65%), Gaps = 2/123 (1%)
Query: 56 PRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGL-LDPPELIKPPKILVIEGLHPMYDARV 114
P A + L+++ ++A+K G ++E P+Y++V + ++P K++++EG+ + DAR+
Sbjct: 69 PNAMDHSLLFQHLQALKRGSAIELPVYSYVEHTRMQETVRVEPKKVIILEGILLLTDARL 128
Query: 115 RELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEAR-KPDFDAYIDPQKQYAD 173
RE ++FSI++D ++ +I+RD+ ERG S++S+ A + +P F +I+P KQYAD
Sbjct: 129 REEMNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYAD 188
Query: 174 AVI 176
++
Sbjct: 189 IIV 191
>sp|B4T9T4|URK_SALHS Uridine kinase OS=Salmonella heidelberg (strain SL476) GN=udk PE=3
SV=1
Length = 213
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 81/123 (65%), Gaps = 2/123 (1%)
Query: 56 PRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGL-LDPPELIKPPKILVIEGLHPMYDARV 114
P A + L+++ ++A+K G ++E P+Y++V + ++P K++++EG+ + DAR+
Sbjct: 69 PNAMDHSLLFQHLQALKRGSAIELPVYSYVEHTRMQETVRVEPKKVIILEGILLLTDARL 128
Query: 115 RELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEAR-KPDFDAYIDPQKQYAD 173
RE ++FSI++D ++ +I+RD+ ERG S++S+ A + +P F +I+P KQYAD
Sbjct: 129 REEMNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYAD 188
Query: 174 AVI 176
++
Sbjct: 189 IIV 191
>sp|B5R0B5|URK_SALEP Uridine kinase OS=Salmonella enteritidis PT4 (strain P125109)
GN=udk PE=3 SV=1
Length = 213
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 81/123 (65%), Gaps = 2/123 (1%)
Query: 56 PRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGL-LDPPELIKPPKILVIEGLHPMYDARV 114
P A + L+++ ++A+K G ++E P+Y++V + ++P K++++EG+ + DAR+
Sbjct: 69 PNAMDHSLLFQHLQALKRGSAIELPVYSYVEHTRMQETVRVEPKKVIILEGILLLTDARL 128
Query: 115 RELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEAR-KPDFDAYIDPQKQYAD 173
RE ++FSI++D ++ +I+RD+ ERG S++S+ A + +P F +I+P KQYAD
Sbjct: 129 REEMNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYAD 188
Query: 174 AVI 176
++
Sbjct: 189 IIV 191
>sp|B5FMU1|URK_SALDC Uridine kinase OS=Salmonella dublin (strain CT_02021853) GN=udk
PE=3 SV=1
Length = 213
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 81/123 (65%), Gaps = 2/123 (1%)
Query: 56 PRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGL-LDPPELIKPPKILVIEGLHPMYDARV 114
P A + L+++ ++A+K G ++E P+Y++V + ++P K++++EG+ + DAR+
Sbjct: 69 PNAMDHSLLFQHLQALKRGSAIELPVYSYVEHTRMQETVRVEPKKVIILEGILLLTDARL 128
Query: 115 RELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEAR-KPDFDAYIDPQKQYAD 173
RE ++FSI++D ++ +I+RD+ ERG S++S+ A + +P F +I+P KQYAD
Sbjct: 129 REEMNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYAD 188
Query: 174 AVI 176
++
Sbjct: 189 IIV 191
>sp|Q57MN1|URK_SALCH Uridine kinase OS=Salmonella choleraesuis (strain SC-B67) GN=udk
PE=3 SV=1
Length = 213
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 81/123 (65%), Gaps = 2/123 (1%)
Query: 56 PRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGL-LDPPELIKPPKILVIEGLHPMYDARV 114
P A + L+++ ++A+K G ++E P+Y++V + ++P K++++EG+ + DAR+
Sbjct: 69 PNAMDHSLLFQHLQALKRGSAIELPVYSYVEHTRMQETVRVEPKKVIILEGILLLTDARL 128
Query: 115 RELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEAR-KPDFDAYIDPQKQYAD 173
RE ++FSI++D ++ +I+RD+ ERG S++S+ A + +P F +I+P KQYAD
Sbjct: 129 REEMNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYAD 188
Query: 174 AVI 176
++
Sbjct: 189 IIV 191
>sp|B5EXV0|URK_SALA4 Uridine kinase OS=Salmonella agona (strain SL483) GN=udk PE=3 SV=1
Length = 213
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 81/123 (65%), Gaps = 2/123 (1%)
Query: 56 PRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGL-LDPPELIKPPKILVIEGLHPMYDARV 114
P A + L+++ ++A+K G ++E P+Y++V + ++P K++++EG+ + DAR+
Sbjct: 69 PNAMDHSLLFQHLQALKRGSAIELPVYSYVEHTRMQETVRVEPKKVIILEGILLLTDARL 128
Query: 115 RELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEAR-KPDFDAYIDPQKQYAD 173
RE ++FSI++D ++ +I+RD+ ERG S++S+ A + +P F +I+P KQYAD
Sbjct: 129 REEMNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYAD 188
Query: 174 AVI 176
++
Sbjct: 189 IIV 191
>sp|P44533|URK_HAEIN Uridine kinase OS=Haemophilus influenzae (strain ATCC 51907 / DSM
11121 / KW20 / Rd) GN=udk PE=3 SV=1
Length = 213
Score = 88.2 bits (217), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 77/123 (62%), Gaps = 2/123 (1%)
Query: 56 PRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGL-LDPPELIKPPKILVIEGLHPMYDARV 114
P + + DL+ + +K +K+G +V+ P+Y++V + P +I+++EG+ + D RV
Sbjct: 67 PNSMDRDLLIQHLKNLKNGSAVDVPVYSYVEHTRTNETTHFTPKRIVILEGILLLTDERV 126
Query: 115 RELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEAR-KPDFDAYIDPQKQYAD 173
R+L D S+++D ++ F ++QRDM ERG SL+S+ A +P F +I+P KQYAD
Sbjct: 127 RQLADISVFVDTPLDICFIRRLQRDMEERGRSLQSVIDQYRATVRPMFLQFIEPSKQYAD 186
Query: 174 AVI 176
VI
Sbjct: 187 IVI 189
>sp|A5UFT8|URK_HAEIG Uridine kinase OS=Haemophilus influenzae (strain PittGG) GN=udk
PE=3 SV=1
Length = 213
Score = 88.2 bits (217), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 77/123 (62%), Gaps = 2/123 (1%)
Query: 56 PRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGL-LDPPELIKPPKILVIEGLHPMYDARV 114
P + + DL+ + +K +K+G +V+ P+Y++V + P +I+++EG+ + D RV
Sbjct: 67 PNSMDRDLLIQHLKNLKNGSAVDVPVYSYVEHTRTNETTHFTPKRIVILEGILLLTDERV 126
Query: 115 RELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEAR-KPDFDAYIDPQKQYAD 173
R+L D S+++D ++ F ++QRDM ERG SL+S+ A +P F +I+P KQYAD
Sbjct: 127 RQLADISVFVDTPLDICFIRRLQRDMEERGRSLQSVIDQYRATVRPMFLQFIEPSKQYAD 186
Query: 174 AVI 176
VI
Sbjct: 187 IVI 189
>sp|Q4QP55|URK_HAEI8 Uridine kinase OS=Haemophilus influenzae (strain 86-028NP) GN=udk
PE=3 SV=1
Length = 213
Score = 88.2 bits (217), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 77/123 (62%), Gaps = 2/123 (1%)
Query: 56 PRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGL-LDPPELIKPPKILVIEGLHPMYDARV 114
P + + DL+ + +K +K+G +V+ P+Y++V + P +I+++EG+ + D RV
Sbjct: 67 PNSMDRDLLIQHLKNLKNGSAVDVPVYSYVEHTRTNETTHFTPKRIVILEGILLLTDERV 126
Query: 115 RELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEAR-KPDFDAYIDPQKQYAD 173
R+L D S+++D ++ F ++QRDM ERG SL+S+ A +P F +I+P KQYAD
Sbjct: 127 RQLADISVFVDTPLDICFIRRLQRDMEERGRSLQSVIDQYRATVRPMFLQFIEPSKQYAD 186
Query: 174 AVI 176
VI
Sbjct: 187 IVI 189
>sp|A5UB17|URK_HAEIE Uridine kinase OS=Haemophilus influenzae (strain PittEE) GN=udk
PE=3 SV=1
Length = 213
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 77/123 (62%), Gaps = 2/123 (1%)
Query: 56 PRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGL-LDPPELIKPPKILVIEGLHPMYDARV 114
P + + DL+ + +K +K+G +V+ P+Y++V + P +I+++EG+ + D RV
Sbjct: 67 PSSMDRDLLIQHLKNLKNGSAVDVPVYSYVEHTRTNETTHFTPKRIVILEGILLLTDERV 126
Query: 115 RELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEAR-KPDFDAYIDPQKQYAD 173
R+L D S+++D ++ F ++QRDM ERG SL+S+ A +P F +I+P KQYAD
Sbjct: 127 RQLADISVFVDTPLDICFIRRLQRDMEERGRSLQSVIDQYRATVRPMFLQFIEPSKQYAD 186
Query: 174 AVI 176
VI
Sbjct: 187 IVI 189
>sp|B4SXV3|URK_SALNS Uridine kinase OS=Salmonella newport (strain SL254) GN=udk PE=3
SV=1
Length = 213
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 80/123 (65%), Gaps = 2/123 (1%)
Query: 56 PRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGL-LDPPELIKPPKILVIEGLHPMYDARV 114
P A + L++ ++A+K G ++E P+Y++V + ++P K++++EG+ + DAR+
Sbjct: 69 PNAMDHSLLFLHLQALKRGSAIELPVYSYVEHTRMQETVRVEPKKVIILEGILLLTDARL 128
Query: 115 RELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEAR-KPDFDAYIDPQKQYAD 173
RE ++FSI++D ++ +I+RD+ ERG S++S+ A + +P F +I+P KQYAD
Sbjct: 129 REEMNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYAD 188
Query: 174 AVI 176
++
Sbjct: 189 IIV 191
>sp|A7MHG8|URK_CROS8 Uridine kinase OS=Cronobacter sakazakii (strain ATCC BAA-894)
GN=udk PE=3 SV=1
Length = 213
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 79/123 (64%), Gaps = 2/123 (1%)
Query: 56 PRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGLLDPPEL-IKPPKILVIEGLHPMYDARV 114
P A + +L+++ ++ +K G +E P+Y++V + I+P K++++EG+ + DAR+
Sbjct: 69 PNAMDHNLLFQHLQMLKAGKPIELPVYSYVEHTRTAQTVHIEPKKVIILEGILLLTDARL 128
Query: 115 RELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEAR-KPDFDAYIDPQKQYAD 173
RE ++FSI++D ++ +I+RD+ ERG S++S+ + +P F +IDP KQYAD
Sbjct: 129 REEMNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMTQYQKTVRPMFLQFIDPSKQYAD 188
Query: 174 AVI 176
++
Sbjct: 189 IIV 191
>sp|A6TBG6|URK_KLEP7 Uridine kinase OS=Klebsiella pneumoniae subsp. pneumoniae (strain
ATCC 700721 / MGH 78578) GN=udk PE=3 SV=1
Length = 213
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 79/123 (64%), Gaps = 2/123 (1%)
Query: 56 PRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGLLDPPEL-IKPPKILVIEGLHPMYDARV 114
P + + L+++ ++ +K G +E P+Y++V P + ++P K++++EG+ + DAR+
Sbjct: 69 PSSMDHSLLFQHLQMLKSGQPIELPVYSYVEHTRTPNTIHVEPKKVIILEGILLLTDARL 128
Query: 115 RELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEAR-KPDFDAYIDPQKQYAD 173
R L+FSI++D ++ +I+RD+ ERG S++S+ A + +P F +I+P KQYAD
Sbjct: 129 RNELNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYAD 188
Query: 174 AVI 176
++
Sbjct: 189 IIV 191
>sp|B5XPC8|URK_KLEP3 Uridine kinase OS=Klebsiella pneumoniae (strain 342) GN=udk PE=3
SV=1
Length = 213
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 79/123 (64%), Gaps = 2/123 (1%)
Query: 56 PRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGLLDPPEL-IKPPKILVIEGLHPMYDARV 114
P + + L+++ ++ +K G +E P+Y++V P + ++P K++++EG+ + DAR+
Sbjct: 69 PSSMDHSLLFQHLQMLKSGQPIELPVYSYVEHTRTPNTIHVEPKKVIILEGILLLTDARL 128
Query: 115 RELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEAR-KPDFDAYIDPQKQYAD 173
R L+FSI++D ++ +I+RD+ ERG S++S+ A + +P F +I+P KQYAD
Sbjct: 129 RNELNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYAD 188
Query: 174 AVI 176
++
Sbjct: 189 IIV 191
>sp|P0A8F7|URK_SHIFL Uridine kinase OS=Shigella flexneri GN=udk PE=3 SV=1
Length = 213
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 80/123 (65%), Gaps = 2/123 (1%)
Query: 56 PRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGL-LDPPELIKPPKILVIEGLHPMYDARV 114
P A + L+ E ++A+K G +++ P+Y++V + ++P K++++EG+ + DAR+
Sbjct: 69 PSAMDHSLLLEHLQALKRGSAIDLPVYSYVEHTRMKETVTVEPKKVIILEGILLLTDARL 128
Query: 115 RELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEAR-KPDFDAYIDPQKQYAD 173
R+ L+FSI++D ++ +I+RD+ ERG S++S+ A + +P F +I+P KQYAD
Sbjct: 129 RDELNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYAD 188
Query: 174 AVI 176
++
Sbjct: 189 IIV 191
>sp|P0A8F4|URK_ECOLI Uridine kinase OS=Escherichia coli (strain K12) GN=udk PE=3 SV=1
Length = 213
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 80/123 (65%), Gaps = 2/123 (1%)
Query: 56 PRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGL-LDPPELIKPPKILVIEGLHPMYDARV 114
P A + L+ E ++A+K G +++ P+Y++V + ++P K++++EG+ + DAR+
Sbjct: 69 PSAMDHSLLLEHLQALKRGSAIDLPVYSYVEHTRMKETVTVEPKKVIILEGILLLTDARL 128
Query: 115 RELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEAR-KPDFDAYIDPQKQYAD 173
R+ L+FSI++D ++ +I+RD+ ERG S++S+ A + +P F +I+P KQYAD
Sbjct: 129 RDELNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYAD 188
Query: 174 AVI 176
++
Sbjct: 189 IIV 191
>sp|P0A8F5|URK_ECOL6 Uridine kinase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC
700928 / UPEC) GN=udk PE=3 SV=1
Length = 213
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 80/123 (65%), Gaps = 2/123 (1%)
Query: 56 PRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGL-LDPPELIKPPKILVIEGLHPMYDARV 114
P A + L+ E ++A+K G +++ P+Y++V + ++P K++++EG+ + DAR+
Sbjct: 69 PSAMDHSLLLEHLQALKRGSAIDLPVYSYVEHTRMKETVTVEPKKVIILEGILLLTDARL 128
Query: 115 RELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEAR-KPDFDAYIDPQKQYAD 173
R+ L+FSI++D ++ +I+RD+ ERG S++S+ A + +P F +I+P KQYAD
Sbjct: 129 RDELNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYAD 188
Query: 174 AVI 176
++
Sbjct: 189 IIV 191
>sp|P0A8F6|URK_ECO57 Uridine kinase OS=Escherichia coli O157:H7 GN=udk PE=3 SV=1
Length = 213
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 80/123 (65%), Gaps = 2/123 (1%)
Query: 56 PRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGL-LDPPELIKPPKILVIEGLHPMYDARV 114
P A + L+ E ++A+K G +++ P+Y++V + ++P K++++EG+ + DAR+
Sbjct: 69 PSAMDHSLLLEHLQALKRGSAIDLPVYSYVEHTRMKETVTVEPKKVIILEGILLLTDARL 128
Query: 115 RELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEAR-KPDFDAYIDPQKQYAD 173
R+ L+FSI++D ++ +I+RD+ ERG S++S+ A + +P F +I+P KQYAD
Sbjct: 129 RDELNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYAD 188
Query: 174 AVI 176
++
Sbjct: 189 IIV 191
>sp|A4WCB6|URK_ENT38 Uridine kinase OS=Enterobacter sp. (strain 638) GN=udk PE=3 SV=1
Length = 213
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 80/123 (65%), Gaps = 2/123 (1%)
Query: 56 PRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGLLDPPEL-IKPPKILVIEGLHPMYDARV 114
P A + L+++ ++ +K+G ++ P+Y++V + I+P K++++EG+ + DAR+
Sbjct: 69 PNAMDHSLLFQHLQMIKNGTPIDLPVYSYVDHTRTQDTIHIEPKKVIILEGILLLTDARL 128
Query: 115 RELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEAR-KPDFDAYIDPQKQYAD 173
RE ++FSI++D ++ +I+RD+ ERG S++S+ A + +P F +I+P KQYAD
Sbjct: 129 REAMNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYAD 188
Query: 174 AVI 176
++
Sbjct: 189 IIV 191
>sp|B7LV30|URK_ESCF3 Uridine kinase OS=Escherichia fergusonii (strain ATCC 35469 / DSM
13698 / CDC 0568-73) GN=udk PE=3 SV=1
Length = 213
Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 80/123 (65%), Gaps = 2/123 (1%)
Query: 56 PRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGL-LDPPELIKPPKILVIEGLHPMYDARV 114
P A + L+ E ++A+K G +++ P+Y++V + ++P K++++EG+ + DAR+
Sbjct: 69 PSAMDHSLLLEHLQALKRGSAIDLPVYSYVEHTRMKETVKVEPKKVIILEGILLLTDARL 128
Query: 115 RELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEAR-KPDFDAYIDPQKQYAD 173
R+ L+FSI++D ++ +I+RD+ ERG S++S+ A + +P F +I+P KQYAD
Sbjct: 129 RDELNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYAD 188
Query: 174 AVI 176
++
Sbjct: 189 IIV 191
>sp|B5RQJ8|URK_BORRA Uridine kinase OS=Borrelia recurrentis (strain A1) GN=udk PE=3 SV=1
Length = 206
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 76/123 (61%), Gaps = 2/123 (1%)
Query: 56 PRANNFDLMYEQVKAMKDGVSVEKPIYNHVT-GLLDPPELIKPPKILVIEGLHPMYDARV 114
P A + +L Y+Q+K +K+ S+ P+Y+ + D I P I+++EG+ + RV
Sbjct: 56 PDAFDNNLFYKQLKKLKENQSINMPLYDFINHKRRDETIKIVPTPIIIVEGIMIFVEERV 115
Query: 115 RELLDFSIYLDISNEVKFAWKIQRDMTERGHSLES-IKASIEARKPDFDAYIDPQKQYAD 173
R L+D IY+D N+++F +++RDM++RG +LES I+ + + + +I+P K+YAD
Sbjct: 116 RNLIDLKIYIDTPNDIRFIRRLERDMSKRGRTLESVIEQYLRTTRAGYYRFIEPTKEYAD 175
Query: 174 AVI 176
+I
Sbjct: 176 LII 178
>sp|B5RLM3|URK_BORDL Uridine kinase OS=Borrelia duttonii (strain Ly) GN=udk PE=3 SV=1
Length = 206
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 76/123 (61%), Gaps = 2/123 (1%)
Query: 56 PRANNFDLMYEQVKAMKDGVSVEKPIYNHVT-GLLDPPELIKPPKILVIEGLHPMYDARV 114
P A + +L Y+Q+K +K+ S+ P+Y+ + D I P I+++EG+ + RV
Sbjct: 56 PDAFDNNLFYKQLKKLKENQSINMPLYDFINHKRRDETIKIVPTPIIIVEGIMIFVEERV 115
Query: 115 RELLDFSIYLDISNEVKFAWKIQRDMTERGHSLES-IKASIEARKPDFDAYIDPQKQYAD 173
R L+D IY+D N+++F +++RDM++RG +LES I+ + + + +I+P K+YAD
Sbjct: 116 RNLIDLKIYIDTPNDIRFIRRLERDMSKRGRTLESVIEQYLRTTRAGYYRFIEPTKEYAD 175
Query: 174 AVI 176
+I
Sbjct: 176 LII 178
>sp|C0ZAS6|URK_BREBN Uridine kinase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC
100599) GN=udk PE=3 SV=1
Length = 214
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 88/154 (57%), Gaps = 4/154 (2%)
Query: 27 SDTTTVICLDDYHS-LDRTGRKEKGVTALD-PRANNFDLMYEQVKAMKDGVSVEKPIYNH 84
+D+ T+I D Y+ +E+ +T D P A + DL+ ++ + G +++KPIY+
Sbjct: 30 NDSVTMIEQDSYYKDQSHLSPEERALTNYDHPFAFDNDLLLAHLQELMQGKAIQKPIYDF 89
Query: 85 VTGLLDPPEL-IKPPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQRDMTER 143
P ++ + P ++++EG+ + D R+R L+D +Y+D +V+ A +I RD+ ER
Sbjct: 90 KVHNRKPEQIQVDPKDVIILEGMLILEDERIRNLMDIKVYVDTDADVRIARRIVRDIEER 149
Query: 144 GHSLESIKAS-IEARKPDFDAYIDPQKQYADAVI 176
G SL+S+ + +P +I+P K+YAD +I
Sbjct: 150 GRSLDSVVTQYLNVVRPMHLQFIEPTKRYADVII 183
>sp|Q7N6J4|URK_PHOLL Uridine kinase OS=Photorhabdus luminescens subsp. laumondii (strain
TT01) GN=udk PE=3 SV=1
Length = 213
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 102/184 (55%), Gaps = 12/184 (6%)
Query: 5 TSVFGGAAEPPKGGNPDSNTL-------ISDTTTVICLDDYHSLDRT--GRKEKGVTALD 55
++ G + G + +NTL + D I +D + D++ +E+ T D
Sbjct: 8 CTIVGISGASASGKSLIANTLYRELRAQVGDHNIGIIPEDCYYKDQSDLSMEERYKTNYD 67
Query: 56 -PRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGLLDPPEL-IKPPKILVIEGLHPMYDAR 113
P + + +L++ ++A+K G S+E P Y++V P + P +++++EG+ + D R
Sbjct: 68 HPSSMDHNLLFSHLQALKMGESIELPQYDYVAHTRKPEAIHFAPKRVIILEGILLLTDKR 127
Query: 114 VRELLDFSIYLDISNEVKFAWKIQRDMTERGHSLES-IKASIEARKPDFDAYIDPQKQYA 172
+R+ +DFSI++D ++ +I+RD+ ERG SL+S I+ + +P F +I+P KQYA
Sbjct: 128 LRQEMDFSIFVDTPLDICLMRRIKRDVHERGRSLDSVIEQYHKTVRPMFLQFIEPSKQYA 187
Query: 173 DAVI 176
D ++
Sbjct: 188 DIIV 191
>sp|A1S796|URK_SHEAM Uridine kinase OS=Shewanella amazonensis (strain ATCC BAA-1098 /
SB2B) GN=udk PE=3 SV=1
Length = 212
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 79/123 (64%), Gaps = 2/123 (1%)
Query: 56 PRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGL-LDPPELIKPPKILVIEGLHPMYDARV 114
P+A + +L+ + ++++K+G SVE P+Y++ + + P K++++EG+ + D +
Sbjct: 67 PKAMDHELLAQHLRSLKEGDSVEIPVYSYTEHTRMSDTRTMTPKKVIILEGILLLTDPHL 126
Query: 115 RELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEAR-KPDFDAYIDPQKQYAD 173
R+L+D S+++D ++ F ++ RD+ ERG ++ES+ + + +P F +I+P KQYAD
Sbjct: 127 RDLMDASVFMDTPLDICFLRRLTRDVAERGRTMESVISQYQKTVRPMFLQFIEPSKQYAD 186
Query: 174 AVI 176
++
Sbjct: 187 IIV 189
>sp|A8GC40|URK_SERP5 Uridine kinase OS=Serratia proteamaculans (strain 568) GN=udk PE=3
SV=1
Length = 213
Score = 82.8 bits (203), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 79/123 (64%), Gaps = 2/123 (1%)
Query: 56 PRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGLLDPPEL-IKPPKILVIEGLHPMYDARV 114
P A + +L+++ ++ +K G ++E P+Y++ + ++P K++++EG+ + D R+
Sbjct: 69 PSAMDHNLLFQHLQMLKSGKAIELPLYSYTEHTRKKETIHLEPKKVIILEGILLLTDIRL 128
Query: 115 RELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEAR-KPDFDAYIDPQKQYAD 173
R+ ++FSI++D ++ +++RD+ ERG S++S+ A + +P F +IDP KQYAD
Sbjct: 129 RQEMNFSIFVDTPLDICLMRRMKRDVNERGRSMDSVMAQYQKTVRPMFLQFIDPSKQYAD 188
Query: 174 AVI 176
++
Sbjct: 189 IIV 191
>sp|B4ESY8|URK_PROMH Uridine kinase OS=Proteus mirabilis (strain HI4320) GN=udk PE=3
SV=1
Length = 213
Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 76/123 (61%), Gaps = 2/123 (1%)
Query: 56 PRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGLLDPPEL-IKPPKILVIEGLHPMYDARV 114
P + + L+Y+ + +K G ++E P Y++V + KP K+++IEG+ + D R+
Sbjct: 69 PNSMDHALLYQHLCELKAGNAIELPQYDYVAHTRKSETIHFKPKKVIIIEGILLLTDKRL 128
Query: 115 RELLDFSIYLDISNEVKFAWKIQRDMTERGHSLES-IKASIEARKPDFDAYIDPQKQYAD 173
RE +DFSI++D ++ +I+RD+ ERG SL+S I+ + +P F +I+P KQYAD
Sbjct: 129 REEMDFSIFVDTPLDICLMRRIKRDVNERGRSLDSVIEQYNKTVRPMFFQFIEPSKQYAD 188
Query: 174 AVI 176
++
Sbjct: 189 IIV 191
>sp|Q65S71|URK_MANSM Uridine kinase OS=Mannheimia succiniciproducens (strain MBEL55E)
GN=udk PE=3 SV=1
Length = 216
Score = 82.0 bits (201), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 87/156 (55%), Gaps = 8/156 (5%)
Query: 27 SDTTTVICLDDYHS----LDRTGRKEKGVTALDPRANNFDLMYEQVKAMKDGVSVEKPIY 82
SD ++I D Y+ LD R + P + + DL+ E ++A+K G SV+ P Y
Sbjct: 39 SDDISIISEDCYYKDQSHLDFATRTQTNYDH--PNSMDRDLLLEHLRALKAGKSVDIPQY 96
Query: 83 NHVTGL-LDPPELIKPPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQRDMT 141
++V + P K++++EG+ + D RVR L S+++D ++ F +++RDM
Sbjct: 97 SYVEHTRMKEVTHFTPKKVIILEGILLLTDERVRNELSLSLFVDAPLDICFIRRLKRDME 156
Query: 142 ERGHSLES-IKASIEARKPDFDAYIDPQKQYADAVI 176
ERG SLES I+ + +P F +I+P KQYAD +I
Sbjct: 157 ERGRSLESVIEQYRKTVRPMFLQFIEPSKQYADIII 192
>sp|Q38VV6|URK_LACSS Uridine kinase OS=Lactobacillus sakei subsp. sakei (strain 23K)
GN=udk PE=3 SV=1
Length = 211
Score = 81.3 bits (199), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 75/123 (60%), Gaps = 2/123 (1%)
Query: 56 PRANNFDLMYEQVKAMKDGVSVEKPIYNH-VTGLLDPPELIKPPKILVIEGLHPMYDARV 114
P A + DL+ EQ +K+ +E+P+Y++ + D ++P ++++EG+ + DAR+
Sbjct: 64 PDAFDTDLLIEQATMLKNHQPIEQPVYDYKIHNRTDEVVHVEPQDVIILEGILVLADARL 123
Query: 115 RELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKAS-IEARKPDFDAYIDPQKQYAD 173
R+L+D +Y+D ++++ ++ RDM RG S + I ++ KP F +I+P K+YAD
Sbjct: 124 RDLMDIKVYVDTDDDIRLLRRMSRDMESRGRSFDDIVMQYLKTVKPMFHEFIEPTKRYAD 183
Query: 174 AVI 176
++
Sbjct: 184 LIV 186
>sp|B2VFR1|URK_ERWT9 Uridine kinase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99)
GN=udk PE=3 SV=1
Length = 213
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 79/123 (64%), Gaps = 2/123 (1%)
Query: 56 PRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGLLDPPEL-IKPPKILVIEGLHPMYDARV 114
P A + L+ + ++ +K G +++ P+Y++V + ++P K++++EG+ + DAR+
Sbjct: 69 PSAMDHSLLLQHLQMLKAGQAIDLPVYSYVEHTRTQKTIRLEPKKVIILEGILLLTDARL 128
Query: 115 RELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEAR-KPDFDAYIDPQKQYAD 173
R+ ++FSI++D ++ +++RD+ ERG S++S+ A + +P F +I+P KQYAD
Sbjct: 129 RQEMNFSIFVDTPLDICLMRRMKRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYAD 188
Query: 174 AVI 176
++
Sbjct: 189 IIV 191
>sp|B1JPY6|URK_YERPY Uridine kinase OS=Yersinia pseudotuberculosis serotype O:3 (strain
YPIII) GN=udk PE=3 SV=1
Length = 213
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 78/123 (63%), Gaps = 2/123 (1%)
Query: 56 PRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGLLDPPEL-IKPPKILVIEGLHPMYDARV 114
P A + +L+ E ++A+K G VE P+Y++ + ++P K++++EG+ + D R+
Sbjct: 69 PSAMDHNLLLEHLQALKAGKPVELPLYSYTEHTRKKETVHLEPKKVIILEGILLLTDIRL 128
Query: 115 RELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEAR-KPDFDAYIDPQKQYAD 173
R+ ++FSI++D ++ +++RD+ ERG S++S+ A + +P F +I+P KQYAD
Sbjct: 129 RQEMNFSIFVDTPLDICLMRRMKRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYAD 188
Query: 174 AVI 176
++
Sbjct: 189 IIV 191
>sp|Q66C70|URK_YERPS Uridine kinase OS=Yersinia pseudotuberculosis serotype I (strain
IP32953) GN=udk PE=3 SV=1
Length = 213
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 78/123 (63%), Gaps = 2/123 (1%)
Query: 56 PRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGLLDPPEL-IKPPKILVIEGLHPMYDARV 114
P A + +L+ E ++A+K G VE P+Y++ + ++P K++++EG+ + D R+
Sbjct: 69 PSAMDHNLLLEHLQALKAGKPVELPLYSYTEHTRKKETVHLEPKKVIILEGILLLTDIRL 128
Query: 115 RELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEAR-KPDFDAYIDPQKQYAD 173
R+ ++FSI++D ++ +++RD+ ERG S++S+ A + +P F +I+P KQYAD
Sbjct: 129 RQEMNFSIFVDTPLDICLMRRMKRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYAD 188
Query: 174 AVI 176
++
Sbjct: 189 IIV 191
>sp|A4TKM7|URK_YERPP Uridine kinase OS=Yersinia pestis (strain Pestoides F) GN=udk PE=3
SV=1
Length = 213
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 78/123 (63%), Gaps = 2/123 (1%)
Query: 56 PRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGLLDPPEL-IKPPKILVIEGLHPMYDARV 114
P A + +L+ E ++A+K G VE P+Y++ + ++P K++++EG+ + D R+
Sbjct: 69 PSAMDHNLLLEHLQALKAGKPVELPLYSYTEHTRKKETVHLEPKKVIILEGILLLTDIRL 128
Query: 115 RELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEAR-KPDFDAYIDPQKQYAD 173
R+ ++FSI++D ++ +++RD+ ERG S++S+ A + +P F +I+P KQYAD
Sbjct: 129 RQEMNFSIFVDTPLDICLMRRMKRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYAD 188
Query: 174 AVI 176
++
Sbjct: 189 IIV 191
>sp|Q1CGU6|URK_YERPN Uridine kinase OS=Yersinia pestis bv. Antiqua (strain Nepal516)
GN=udk PE=3 SV=1
Length = 213
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 78/123 (63%), Gaps = 2/123 (1%)
Query: 56 PRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGLLDPPEL-IKPPKILVIEGLHPMYDARV 114
P A + +L+ E ++A+K G VE P+Y++ + ++P K++++EG+ + D R+
Sbjct: 69 PSAMDHNLLLEHLQALKAGKPVELPLYSYTEHTRKKETVHLEPKKVIILEGILLLTDIRL 128
Query: 115 RELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEAR-KPDFDAYIDPQKQYAD 173
R+ ++FSI++D ++ +++RD+ ERG S++S+ A + +P F +I+P KQYAD
Sbjct: 129 RQEMNFSIFVDTPLDICLMRRMKRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYAD 188
Query: 174 AVI 176
++
Sbjct: 189 IIV 191
>sp|A9R2M5|URK_YERPG Uridine kinase OS=Yersinia pestis bv. Antiqua (strain Angola)
GN=udk PE=3 SV=1
Length = 213
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 78/123 (63%), Gaps = 2/123 (1%)
Query: 56 PRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGLLDPPEL-IKPPKILVIEGLHPMYDARV 114
P A + +L+ E ++A+K G VE P+Y++ + ++P K++++EG+ + D R+
Sbjct: 69 PSAMDHNLLLEHLQALKAGKPVELPLYSYTEHTRKKETVHLEPKKVIILEGILLLTDIRL 128
Query: 115 RELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEAR-KPDFDAYIDPQKQYAD 173
R+ ++FSI++D ++ +++RD+ ERG S++S+ A + +P F +I+P KQYAD
Sbjct: 129 RQEMNFSIFVDTPLDICLMRRMKRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYAD 188
Query: 174 AVI 176
++
Sbjct: 189 IIV 191
>sp|Q8ZFZ9|URK_YERPE Uridine kinase OS=Yersinia pestis GN=udk PE=3 SV=1
Length = 213
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 78/123 (63%), Gaps = 2/123 (1%)
Query: 56 PRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGLLDPPEL-IKPPKILVIEGLHPMYDARV 114
P A + +L+ E ++A+K G VE P+Y++ + ++P K++++EG+ + D R+
Sbjct: 69 PSAMDHNLLLEHLQALKAGKPVELPLYSYTEHTRKKETVHLEPKKVIILEGILLLTDIRL 128
Query: 115 RELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEAR-KPDFDAYIDPQKQYAD 173
R+ ++FSI++D ++ +++RD+ ERG S++S+ A + +P F +I+P KQYAD
Sbjct: 129 RQEMNFSIFVDTPLDICLMRRMKRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYAD 188
Query: 174 AVI 176
++
Sbjct: 189 IIV 191
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.138 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 132,935,665
Number of Sequences: 539616
Number of extensions: 5891351
Number of successful extensions: 13971
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 242
Number of HSP's successfully gapped in prelim test: 293
Number of HSP's that attempted gapping in prelim test: 13153
Number of HSP's gapped (non-prelim): 540
length of query: 329
length of database: 191,569,459
effective HSP length: 118
effective length of query: 211
effective length of database: 127,894,771
effective search space: 26985796681
effective search space used: 26985796681
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)