BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048280
(381 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/307 (37%), Positives = 163/307 (53%), Gaps = 40/307 (13%)
Query: 26 EEDLEKIAAREQKHFPFEALVSATKNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHS 85
EED E + + K F L A+ NF N LG GGFG V+KG+L DG +AVK+L
Sbjct: 15 EEDPE-VHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEE 73
Query: 86 SNQGKK-EFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFSLIK-- 142
QG + +F+ E ++++ HRN++ L G+C E+LL+Y Y+ N S+ L +
Sbjct: 74 RXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQ 133
Query: 143 --------------------------DIQILFRKKKTDIKASNILLDDKWIPKIADFGMA 176
D +I+ R D+KA+NILLD+++ + DFG+A
Sbjct: 134 PPLDWPKRQRIALGSARGLAYLHDHCDPKIIHR----DVKAANILLDEEFEAVVGDFGLA 189
Query: 177 RLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNL-- 234
+L HV V GT G++APEY+ G S K DVF +GV++LELI+GQR +F+L
Sbjct: 190 KLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQR--AFDLAR 247
Query: 235 --DVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTM 292
+ D LLDW L K+ K +VD L + +++ IQ+ LLCTQ P RP M
Sbjct: 248 LANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKM 307
Query: 293 RRVVVML 299
VV ML
Sbjct: 308 SEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 177 bits (449), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 113/307 (36%), Positives = 162/307 (52%), Gaps = 40/307 (13%)
Query: 26 EEDLEKIAAREQKHFPFEALVSATKNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHS 85
EED E + + K F L A+ NF N LG GGFG V+KG+L DG +AVK+L
Sbjct: 7 EEDPE-VHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEE 65
Query: 86 SNQGKK-EFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFSLIK-- 142
QG + +F+ E ++++ HRN++ L G+C E+LL+Y Y+ N S+ L +
Sbjct: 66 RTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQ 125
Query: 143 --------------------------DIQILFRKKKTDIKASNILLDDKWIPKIADFGMA 176
D +I+ R D+KA+NILLD+++ + DFG+A
Sbjct: 126 PPLDWPKRQRIALGSARGLAYLHDHCDPKIIHR----DVKAANILLDEEFEAVVGDFGLA 181
Query: 177 RLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNL-- 234
+L HV V G G++APEY+ G S K DVF +GV++LELI+GQR +F+L
Sbjct: 182 KLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQR--AFDLAR 239
Query: 235 --DVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTM 292
+ D LLDW L K+ K +VD L + +++ IQ+ LLCTQ P RP M
Sbjct: 240 LANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKM 299
Query: 293 RRVVVML 299
VV ML
Sbjct: 300 SEVVRML 306
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/283 (33%), Positives = 154/283 (54%), Gaps = 22/283 (7%)
Query: 36 EQKHFPFEALVSATKNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFEN 95
E P L AT NF +G G FG V+KG L DG ++A+K+ + S+QG +EFE
Sbjct: 25 ESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFET 84
Query: 96 EAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLF---------SLIKDIQI 146
E + L+ +H ++V+L+G+C E +LIY+Y+ N +L + L+ S + ++I
Sbjct: 85 EIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEI 144
Query: 147 LFRKKK------------TDIKASNILLDDKWIPKIADFGMARLFPE-DQTHVNTRVAGT 193
+ D+K+ NILLD+ ++PKI DFG+++ E DQTH+ V GT
Sbjct: 145 CIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGT 204
Query: 194 NGYMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDK 253
GY+ PEY + G L+ K+DV+SFGVV+ E++ + +L + NL +WA + + +
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264
Query: 254 SLEIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
+IVDP+LA + + + C + RP+M V+
Sbjct: 265 LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/283 (33%), Positives = 153/283 (54%), Gaps = 22/283 (7%)
Query: 36 EQKHFPFEALVSATKNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFEN 95
E P L AT NF +G G FG V+KG L DG ++A+K+ + S+QG +EFE
Sbjct: 25 ESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFET 84
Query: 96 EAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLF---------SLIKDIQI 146
E + L+ +H ++V+L+G+C E +LIY+Y+ N +L + L+ S + ++I
Sbjct: 85 EIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEI 144
Query: 147 LFRKKK------------TDIKASNILLDDKWIPKIADFGMARLFPE-DQTHVNTRVAGT 193
+ D+K+ NILLD+ ++PKI DFG+++ E QTH+ V GT
Sbjct: 145 CIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGT 204
Query: 194 NGYMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDK 253
GY+ PEY + G L+ K+DV+SFGVV+ E++ + +L + NL +WA + + +
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264
Query: 254 SLEIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
+IVDP+LA + + + C + RP+M V+
Sbjct: 265 LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/218 (37%), Positives = 124/218 (56%), Gaps = 33/218 (15%)
Query: 40 FPFEALVSATKNFHP------SNKLGEGGFGPVFKGKLDDGREIAVKKLSH----SSNQG 89
F F L + T NF NK+GEGGFG V+KG +++ +AVKKL+ ++ +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 73
Query: 90 KKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFSL--------- 140
K++F+ E K++A+ QH N+V LLG+ + G + L+Y Y+ N SL L L
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 141 ---------IKDIQILFRKKKT--DIKASNILLDDKWIPKIADFGMARLFPE-DQTHVNT 188
I L DIK++NILLD+ + KI+DFG+AR + QT + +
Sbjct: 134 MRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXS 193
Query: 189 RVAGTNGYMAPEYVMHGHLSVKADVFSFGVVILELISG 226
R+ GT YMAPE + G ++ K+D++SFGVV+LE+I+G
Sbjct: 194 RIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 82/218 (37%), Positives = 123/218 (56%), Gaps = 33/218 (15%)
Query: 40 FPFEALVSATKNFHP------SNKLGEGGFGPVFKGKLDDGREIAVKKLSH----SSNQG 89
F F L + T NF NK+GEGGFG V+KG +++ +AVKKL+ ++ +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 73
Query: 90 KKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFSL--------- 140
K++F+ E K++A+ QH N+V LLG+ + G + L+Y Y+ N SL L L
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 141 ---------IKDIQILFRKKKT--DIKASNILLDDKWIPKIADFGMARLFPE-DQTHVNT 188
I L DIK++NILLD+ + KI+DFG+AR + QT +
Sbjct: 134 MRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXX 193
Query: 189 RVAGTNGYMAPEYVMHGHLSVKADVFSFGVVILELISG 226
R+ GT YMAPE + G ++ K+D++SFGVV+LE+I+G
Sbjct: 194 RIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 122/218 (55%), Gaps = 33/218 (15%)
Query: 40 FPFEALVSATKNFHP------SNKLGEGGFGPVFKGKLDDGREIAVKKLSH----SSNQG 89
F F L + T NF NK+GEGGFG V+KG +++ +AVKKL+ ++ +
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 67
Query: 90 KKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFSL--------- 140
K++F+ E K++A+ QH N+V LLG+ + G + L+Y Y+ N SL L L
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 127
Query: 141 ---------IKDIQILFRKKKT--DIKASNILLDDKWIPKIADFGMARLFPE-DQTHVNT 188
I L DIK++NILLD+ + KI+DFG+AR + Q +
Sbjct: 128 MRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXX 187
Query: 189 RVAGTNGYMAPEYVMHGHLSVKADVFSFGVVILELISG 226
R+ GT YMAPE + G ++ K+D++SFGVV+LE+I+G
Sbjct: 188 RIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 224
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/218 (36%), Positives = 118/218 (54%), Gaps = 33/218 (15%)
Query: 40 FPFEALVSATKNFHP------SNKLGEGGFGPVFKGKLDDGREIAVKKLSH----SSNQG 89
F F L + T NF NK GEGGFG V+KG +++ +AVKKL+ ++ +
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 64
Query: 90 KKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFSL--------- 140
K++F+ E K+ A+ QH N+V LLG+ + G + L+Y Y N SL L L
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWH 124
Query: 141 ---------IKDIQILFRKKKT--DIKASNILLDDKWIPKIADFGMARLFPE-DQTHVNT 188
I L DIK++NILLD+ + KI+DFG+AR + Q +
Sbjct: 125 XRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXS 184
Query: 189 RVAGTNGYMAPEYVMHGHLSVKADVFSFGVVILELISG 226
R+ GT Y APE + G ++ K+D++SFGVV+LE+I+G
Sbjct: 185 RIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITG 221
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 99/218 (45%), Gaps = 39/218 (17%)
Query: 57 KLGEGGFGPVFKGKL------DDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVN 110
+LGEG FG VF + D +AVK L +S +++F+ EA+LL +QH+++V
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 111 LLGYCAHGAEKLLIYEYVINESLDKVLFSLIKDIQIL----------------------- 147
G C G L+++EY+ + L++ L S D ++L
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 148 ---------FRKKKTDIKASNILLDDKWIPKIADFGMAR-LFPEDQTHVNTRVAGTNGYM 197
D+ N L+ + KI DFGM+R ++ D V R +M
Sbjct: 145 AAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWM 204
Query: 198 APEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLD 235
PE +++ + ++DV+SFGVV+ E+ + + + L
Sbjct: 205 PPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLS 242
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 100/218 (45%), Gaps = 39/218 (17%)
Query: 57 KLGEGGFGPVFKGKL------DDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVN 110
+LGEG FG VF + D +AVK L +S +++F+ EA+LL +QH+++V
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 111 LLGYCAHGAEKLLIYEYVINESLDKVLFSLIKDIQILFRKKKT----------------- 153
G C G L+++EY+ + L++ L S D ++L +
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 154 ---------------DIKASNILLDDKWIPKIADFGMAR-LFPEDQTHVNTRVAGTNGYM 197
D+ N L+ + KI DFGM+R ++ D V R +M
Sbjct: 168 AAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWM 227
Query: 198 APEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLD 235
PE +++ + ++DV+SFGVV+ E+ + + + L
Sbjct: 228 PPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLS 265
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 99/218 (45%), Gaps = 39/218 (17%)
Query: 57 KLGEGGFGPVFKGKL------DDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVN 110
+LGEG FG VF + D +AVK L +S +++F+ EA+LL +QH+++V
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 111 LLGYCAHGAEKLLIYEYVINESLDKVLFSLIKDIQIL----------------------- 147
G C G L+++EY+ + L++ L S D ++L
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 148 ---------FRKKKTDIKASNILLDDKWIPKIADFGMAR-LFPEDQTHVNTRVAGTNGYM 197
D+ N L+ + KI DFGM+R ++ D V R +M
Sbjct: 139 AAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWM 198
Query: 198 APEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLD 235
PE +++ + ++DV+SFGVV+ E+ + + + L
Sbjct: 199 PPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLS 236
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 130/290 (44%), Gaps = 54/290 (18%)
Query: 51 NFHPSNKLGEGGFGPVFK------GKLDDGREIAVKKLSHSSNQGKKE-FENEAKLLARV 103
N LG G FG V + GK D ++AVK L +++ +KE +E K+++ +
Sbjct: 47 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL 106
Query: 104 -QHRNVVNLLGYCAHGAEKLLIYEYVINESL-----------------------DKVLFS 139
QH N+VNLLG C HG L+I EY L D + FS
Sbjct: 107 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFS 166
Query: 140 LIKDIQILFRKKKT----DIKASNILLDDKWIPKIADFGMARLFPEDQTHV---NTRVAG 192
+ F K D+ A N+LL + + KI DFG+AR D ++ N R+
Sbjct: 167 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 226
Query: 193 TNGYMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKD 252
+MAPE + +V++DV+S+G+++ E+ S N + V+++ YKL K
Sbjct: 227 K--WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK-----FYKLVK-- 277
Query: 253 KSLEIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVVVMLSKK 302
++ P+ A + + C + +P RPT +++ L ++
Sbjct: 278 DGYQMAQPAFAPKNIYSIMQACWAL-------EPTHRPTFQQICSFLQEQ 320
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 142/323 (43%), Gaps = 63/323 (19%)
Query: 20 SREGDNEE--DLEKIAAREQKHFPFEALVSATKNFHPSNKLGEGGFGPVFK------GKL 71
S EG++ D ++ E+ FP N LG G FG V + GK
Sbjct: 13 SYEGNSYTFIDPTQLPYNEKWEFP-------RNNLQFGKTLGAGAFGKVVEATAFGLGKE 65
Query: 72 DDGREIAVKKLSHSSNQGKKE-FENEAKLLARV-QHRNVVNLLGYCAHGAEKLLIYEYVI 129
D ++AVK L +++ +KE +E K+++ + QH N+VNLLG C HG L+I EY
Sbjct: 66 DAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCC 125
Query: 130 NESL-----------------------DKVLFSLIKDIQILFRKKKT----DIKASNILL 162
L D + FS + F K D+ A N+LL
Sbjct: 126 YGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL 185
Query: 163 DDKWIPKIADFGMARLFPEDQTHV---NTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVV 219
+ + KI DFG+AR D ++ N R+ +MAPE + +V++DV+S+G++
Sbjct: 186 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK--WMAPESIFDCVYTVQSDVWSYGIL 243
Query: 220 ILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGL 279
+ E+ S N + V+++ YKL K ++ P+ A + + C +
Sbjct: 244 LWEIFSLGLNPYPGILVNSK-----FYKLVK--DGYQMAQPAFAPKNIYSIMQACWAL-- 294
Query: 280 LCTQGDPQLRPTMRRVVVMLSKK 302
+P RPT +++ L ++
Sbjct: 295 -----EPTHRPTFQQICSFLQEQ 312
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 145/327 (44%), Gaps = 67/327 (20%)
Query: 20 SREGDNEE--DLEKIAAREQKHFPFEALVSATKNFHPSNKLGEGGFGPVFK------GKL 71
S EG++ D ++ E+ FP N LG G FG V + GK
Sbjct: 21 SYEGNSYTFIDPTQLPYNEKWEFP-------RNNLQFGKTLGAGAFGKVVEATAFGLGKE 73
Query: 72 DDGREIAVKKLSHSSNQGKKE-FENEAKLLARV-QHRNVVNLLGYCAHGAEKLLIYEY-- 127
D ++AVK L +++ +KE +E K+++ + QH N+VNLLG C HG L+I EY
Sbjct: 74 DAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCC 133
Query: 128 ----------------------VINESL---DKVLFSLIKDIQILFRKKKT----DIKAS 158
+ N +L D + FS + F K D+ A
Sbjct: 134 YGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAAR 193
Query: 159 NILLDDKWIPKIADFGMARLFPEDQTHV---NTRVAGTNGYMAPEYVMHGHLSVKADVFS 215
N+LL + + KI DFG+AR D ++ N R+ +MAPE + +V++DV+S
Sbjct: 194 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK--WMAPESIFDCVYTVQSDVWS 251
Query: 216 FGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCI 275
+G+++ E+ S N + V+++ YKL K ++ P+ A + + C
Sbjct: 252 YGILLWEIFSLGLNPYPGILVNSK-----FYKLVK--DGYQMAQPAFAPKNIYSIMQACW 304
Query: 276 QIGLLCTQGDPQLRPTMRRVVVMLSKK 302
+ +P RPT +++ L ++
Sbjct: 305 AL-------EPTHRPTFQQICSFLQEQ 324
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 142/327 (43%), Gaps = 67/327 (20%)
Query: 20 SREGDNEE--DLEKIAAREQKHFPFEALVSATKNFHPSNKLGEGGFGPVFK------GKL 71
S EG++ D ++ E+ FP N LG G FG V + GK
Sbjct: 21 SYEGNSYTFIDPTQLPYNEKWEFP-------RNNLQFGKTLGAGAFGKVVEATAFGLGKE 73
Query: 72 DDGREIAVKKLSHSSNQGKKE-FENEAKLLARV-QHRNVVNLLGYCAHGAEKLLIYEYVI 129
D ++AVK L +++ +KE +E K+++ + QH N+VNLLG C HG L+I EY
Sbjct: 74 DAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCC 133
Query: 130 NESL---------------------------DKVLFSLIKDIQILFRKKKT----DIKAS 158
L D + FS + F K D+ A
Sbjct: 134 YGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAAR 193
Query: 159 NILLDDKWIPKIADFGMARLFPEDQTHV---NTRVAGTNGYMAPEYVMHGHLSVKADVFS 215
N+LL + + KI DFG+AR D ++ N R+ +MAPE + +V++DV+S
Sbjct: 194 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK--WMAPESIFDCVYTVQSDVWS 251
Query: 216 FGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCI 275
+G+++ E+ S N + V+++ YKL K ++ P+ A + + C
Sbjct: 252 YGILLWEIFSLGLNPYPGILVNSK-----FYKLVK--DGYQMAQPAFAPKNIYSIMQACW 304
Query: 276 QIGLLCTQGDPQLRPTMRRVVVMLSKK 302
+ +P RPT +++ L ++
Sbjct: 305 AL-------EPTHRPTFQQICSFLQEQ 324
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 97/196 (49%), Gaps = 27/196 (13%)
Query: 57 KLGEGGFGPVFKGKLD-----DGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNL 111
+LG+G FG V + D G +AVKKL HS+ + ++FE E ++L +QH N+V
Sbjct: 24 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 83
Query: 112 LGYCAHGAEK--LLIYEYVINESLDKVL----------------FSLIKDIQILFRKK-- 151
G C + LI EY+ SL L + K ++ L K+
Sbjct: 84 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 143
Query: 152 KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNG--YMAPEYVMHGHLSV 209
D+ NIL++++ KI DFG+ ++ P+D+ + G + + APE + SV
Sbjct: 144 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 203
Query: 210 KADVFSFGVVILELIS 225
+DV+SFGVV+ EL +
Sbjct: 204 ASDVWSFGVVLYELFT 219
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 98/196 (50%), Gaps = 27/196 (13%)
Query: 57 KLGEGGFGPVFKGKLD-----DGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNL 111
+LG+G FG V + D G +AVKKL HS+ + ++FE E ++L +QH N+V
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 112 LGYCAHGAEK--LLIYEYVINESLDKVLFS----------------LIKDIQILFRKK-- 151
G C + LI EY+ SL L + + K ++ L K+
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTKRYI 139
Query: 152 KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNG--YMAPEYVMHGHLSV 209
D+ NIL++++ KI DFG+ ++ P+D+ + G + + APE + SV
Sbjct: 140 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 199
Query: 210 KADVFSFGVVILELIS 225
+DV+SFGVV+ EL +
Sbjct: 200 ASDVWSFGVVLYELFT 215
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 97/196 (49%), Gaps = 27/196 (13%)
Query: 57 KLGEGGFGPVFKGKLD-----DGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNL 111
+LG+G FG V + D G +AVKKL HS+ + ++FE E ++L +QH N+V
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 112 LGYCAHGAEK--LLIYEYVINESLDKVL----------------FSLIKDIQILFRKK-- 151
G C + LI EY+ SL L + K ++ L K+
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 139
Query: 152 KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNG--YMAPEYVMHGHLSV 209
D+ NIL++++ KI DFG+ ++ P+D+ + G + + APE + SV
Sbjct: 140 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 199
Query: 210 KADVFSFGVVILELIS 225
+DV+SFGVV+ EL +
Sbjct: 200 ASDVWSFGVVLYELFT 215
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 97/196 (49%), Gaps = 27/196 (13%)
Query: 57 KLGEGGFGPVFKGKLD-----DGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNL 111
+LG+G FG V + D G +AVKKL HS+ + ++FE E ++L +QH N+V
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 112 LGYCAHGAEK--LLIYEYVINESLDKVL----------------FSLIKDIQILFRKK-- 151
G C + LI EY+ SL L + K ++ L K+
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 136
Query: 152 KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNG--YMAPEYVMHGHLSV 209
D+ NIL++++ KI DFG+ ++ P+D+ + G + + APE + SV
Sbjct: 137 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 196
Query: 210 KADVFSFGVVILELIS 225
+DV+SFGVV+ EL +
Sbjct: 197 ASDVWSFGVVLYELFT 212
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 97/196 (49%), Gaps = 27/196 (13%)
Query: 57 KLGEGGFGPVFKGKLD-----DGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNL 111
+LG+G FG V + D G +AVKKL HS+ + ++FE E ++L +QH N+V
Sbjct: 22 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 81
Query: 112 LGYCAHGAEK--LLIYEYVINESLDKVL----------------FSLIKDIQILFRKK-- 151
G C + LI EY+ SL L + K ++ L K+
Sbjct: 82 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 141
Query: 152 KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNG--YMAPEYVMHGHLSV 209
D+ NIL++++ KI DFG+ ++ P+D+ + G + + APE + SV
Sbjct: 142 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 201
Query: 210 KADVFSFGVVILELIS 225
+DV+SFGVV+ EL +
Sbjct: 202 ASDVWSFGVVLYELFT 217
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 97/196 (49%), Gaps = 27/196 (13%)
Query: 57 KLGEGGFGPVFKGKLD-----DGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNL 111
+LG+G FG V + D G +AVKKL HS+ + ++FE E ++L +QH N+V
Sbjct: 21 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 80
Query: 112 LGYCAHGAEK--LLIYEYVINESLDKVL----------------FSLIKDIQILFRKK-- 151
G C + LI EY+ SL L + K ++ L K+
Sbjct: 81 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 140
Query: 152 KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNG--YMAPEYVMHGHLSV 209
D+ NIL++++ KI DFG+ ++ P+D+ + G + + APE + SV
Sbjct: 141 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 200
Query: 210 KADVFSFGVVILELIS 225
+DV+SFGVV+ EL +
Sbjct: 201 ASDVWSFGVVLYELFT 216
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 97/196 (49%), Gaps = 27/196 (13%)
Query: 57 KLGEGGFGPVFKGKLD-----DGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNL 111
+LG+G FG V + D G +AVKKL HS+ + ++FE E ++L +QH N+V
Sbjct: 15 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 74
Query: 112 LGYCAHGAEK--LLIYEYVINESLDKVL----------------FSLIKDIQILFRKK-- 151
G C + LI EY+ SL L + K ++ L K+
Sbjct: 75 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 134
Query: 152 KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNG--YMAPEYVMHGHLSV 209
D+ NIL++++ KI DFG+ ++ P+D+ + G + + APE + SV
Sbjct: 135 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 194
Query: 210 KADVFSFGVVILELIS 225
+DV+SFGVV+ EL +
Sbjct: 195 ASDVWSFGVVLYELFT 210
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 97/196 (49%), Gaps = 27/196 (13%)
Query: 57 KLGEGGFGPVFKGKLD-----DGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNL 111
+LG+G FG V + D G +AVKKL HS+ + ++FE E ++L +QH N+V
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 112 LGYCAHGAEK--LLIYEYVINESLDKVL----------------FSLIKDIQILFRKK-- 151
G C + LI EY+ SL L + K ++ L K+
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 136
Query: 152 KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNG--YMAPEYVMHGHLSV 209
D+ NIL++++ KI DFG+ ++ P+D+ + G + + APE + SV
Sbjct: 137 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSV 196
Query: 210 KADVFSFGVVILELIS 225
+DV+SFGVV+ EL +
Sbjct: 197 ASDVWSFGVVLYELFT 212
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 97/196 (49%), Gaps = 27/196 (13%)
Query: 57 KLGEGGFGPVFKGKLD-----DGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNL 111
+LG+G FG V + D G +AVKKL HS+ + ++FE E ++L +QH N+V
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 112 LGYCAHGAEK--LLIYEYVINESLDKVL----------------FSLIKDIQILFRKK-- 151
G C + LI EY+ SL L + K ++ L K+
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 136
Query: 152 KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNG--YMAPEYVMHGHLSV 209
D+ NIL++++ KI DFG+ ++ P+D+ + G + + APE + SV
Sbjct: 137 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 196
Query: 210 KADVFSFGVVILELIS 225
+DV+SFGVV+ EL +
Sbjct: 197 ASDVWSFGVVLYELFT 212
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 142/329 (43%), Gaps = 69/329 (20%)
Query: 20 SREGDNEE--DLEKIAAREQKHFPFEALVSATKNFHPSNKLGEGGFGPVFK------GKL 71
S EG++ D ++ E+ FP N LG G FG V + GK
Sbjct: 21 SYEGNSYTFIDPTQLPYNEKWEFP-------RNNLQFGKTLGAGAFGKVVEATAFGLGKE 73
Query: 72 DDGREIAVKKLSHSSNQGKKE-FENEAKLLARV-QHRNVVNLLGYCAHGAEKLLIYEYVI 129
D ++AVK L +++ +KE +E K+++ + QH N+VNLLG C HG L+I EY
Sbjct: 74 DAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCC 133
Query: 130 N-----------------------------ESLDKVLFSLIKDIQILFRKKKT----DIK 156
S D + FS + F K D+
Sbjct: 134 YGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVA 193
Query: 157 ASNILLDDKWIPKIADFGMARLFPEDQTHV---NTRVAGTNGYMAPEYVMHGHLSVKADV 213
A N+LL + + KI DFG+AR D ++ N R+ +MAPE + +V++DV
Sbjct: 194 ARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK--WMAPESIFDCVYTVQSDV 251
Query: 214 FSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAM 273
+S+G+++ E+ S N + V+++ YKL K ++ P+ A + +
Sbjct: 252 WSYGILLWEIFSLGLNPYPGILVNSK-----FYKLVK--DGYQMAQPAFAPKNIYSIMQA 304
Query: 274 CIQIGLLCTQGDPQLRPTMRRVVVMLSKK 302
C + +P RPT +++ L ++
Sbjct: 305 CWAL-------EPTHRPTFQQICSFLQEQ 326
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 97/196 (49%), Gaps = 27/196 (13%)
Query: 57 KLGEGGFGPVFKGKLD-----DGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNL 111
+LG+G FG V + D G +AVKKL HS+ + ++FE E ++L +QH N+V
Sbjct: 23 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 82
Query: 112 LGYCAHGAEK--LLIYEYVINESLDKVL----------------FSLIKDIQILFRKK-- 151
G C + LI EY+ SL L + K ++ L K+
Sbjct: 83 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 142
Query: 152 KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNG--YMAPEYVMHGHLSV 209
D+ NIL++++ KI DFG+ ++ P+D+ + G + + APE + SV
Sbjct: 143 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 202
Query: 210 KADVFSFGVVILELIS 225
+DV+SFGVV+ EL +
Sbjct: 203 ASDVWSFGVVLYELFT 218
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 97/196 (49%), Gaps = 27/196 (13%)
Query: 57 KLGEGGFGPVFKGKLD-----DGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNL 111
+LG+G FG V + D G +AVKKL HS+ + ++FE E ++L +QH N+V
Sbjct: 48 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 107
Query: 112 LGYCAHGAEK--LLIYEYVINESLDKVL----------------FSLIKDIQILFRKK-- 151
G C + LI EY+ SL L + K ++ L K+
Sbjct: 108 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 167
Query: 152 KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNG--YMAPEYVMHGHLSV 209
D+ NIL++++ KI DFG+ ++ P+D+ + G + + APE + SV
Sbjct: 168 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 227
Query: 210 KADVFSFGVVILELIS 225
+DV+SFGVV+ EL +
Sbjct: 228 ASDVWSFGVVLYELFT 243
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 97/196 (49%), Gaps = 27/196 (13%)
Query: 57 KLGEGGFGPVFKGKLD-----DGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNL 111
+LG+G FG V + D G +AVKKL HS+ + ++FE E ++L +QH N+V
Sbjct: 16 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 75
Query: 112 LGYCAHGAEK--LLIYEYVINESLDKVL----------------FSLIKDIQILFRKK-- 151
G C + LI EY+ SL L + K ++ L K+
Sbjct: 76 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 135
Query: 152 KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNG--YMAPEYVMHGHLSV 209
D+ NIL++++ KI DFG+ ++ P+D+ + G + + APE + SV
Sbjct: 136 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 195
Query: 210 KADVFSFGVVILELIS 225
+DV+SFGVV+ EL +
Sbjct: 196 ASDVWSFGVVLYELFT 211
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 97/196 (49%), Gaps = 27/196 (13%)
Query: 57 KLGEGGFGPVFKGKLD-----DGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNL 111
+LG+G FG V + D G +AVKKL HS+ + ++FE E ++L +QH N+V
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 112 LGYCAHGAEK--LLIYEYVINESLDKVL----------------FSLIKDIQILFRKK-- 151
G C + LI EY+ SL L + K ++ L K+
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 154
Query: 152 KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNG--YMAPEYVMHGHLSV 209
D+ NIL++++ KI DFG+ ++ P+D+ + G + + APE + SV
Sbjct: 155 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 214
Query: 210 KADVFSFGVVILELIS 225
+DV+SFGVV+ EL +
Sbjct: 215 ASDVWSFGVVLYELFT 230
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 97/196 (49%), Gaps = 27/196 (13%)
Query: 57 KLGEGGFGPVFKGKLD-----DGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNL 111
+LG+G FG V + D G +AVKKL HS+ + ++FE E ++L +QH N+V
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 112 LGYCAHGAEK--LLIYEYVINESLDKVL----------------FSLIKDIQILFRKK-- 151
G C + LI EY+ SL L + K ++ L K+
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 154
Query: 152 KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNG--YMAPEYVMHGHLSV 209
D+ NIL++++ KI DFG+ ++ P+D+ + G + + APE + SV
Sbjct: 155 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 214
Query: 210 KADVFSFGVVILELIS 225
+DV+SFGVV+ EL +
Sbjct: 215 ASDVWSFGVVLYELFT 230
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 98/196 (50%), Gaps = 27/196 (13%)
Query: 57 KLGEGGFGPVFKGKLD-----DGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNL 111
+LG+G FG V + D G +AVKKL HS+ + ++FE E ++L +QH N+V
Sbjct: 18 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 77
Query: 112 LGYCAHGAEK--LLIYEYVINESLDKVL----------------FSLIKDIQILFRKK-- 151
G C + LI EY+ SL L + K ++ L K+
Sbjct: 78 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 137
Query: 152 KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNG--YMAPEYVMHGHLSV 209
++ NIL++++ KI DFG+ ++ P+D+ + + G + + APE + SV
Sbjct: 138 HRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSV 197
Query: 210 KADVFSFGVVILELIS 225
+DV+SFGVV+ EL +
Sbjct: 198 ASDVWSFGVVLYELFT 213
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 98/196 (50%), Gaps = 27/196 (13%)
Query: 57 KLGEGGFGPVFKGKLD-----DGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNL 111
+LG+G FG V + D G +AVKKL HS+ + ++FE E ++L +QH N+V
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 112 LGYCAHGAEK--LLIYEYVINESLDKVL----------------FSLIKDIQILFRKK-- 151
G C + LI E++ SL + L + K ++ L K+
Sbjct: 80 KGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 139
Query: 152 KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNG--YMAPEYVMHGHLSV 209
D+ NIL++++ KI DFG+ ++ P+D+ + G + + APE + SV
Sbjct: 140 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 199
Query: 210 KADVFSFGVVILELIS 225
+DV+SFGVV+ EL +
Sbjct: 200 ASDVWSFGVVLYELFT 215
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 126/291 (43%), Gaps = 62/291 (21%)
Query: 58 LGEGGFGPVFKG------KLDDGREIAVKKLSHSSNQGKKE-FENEAKLLARV-QHRNVV 109
LG G FG V + K D +AVK L S++ ++E +E K+L+ + H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 110 NLLGYCAHGAEKLLIYEYVINESLDKVL-------------------------------- 137
NLLG C G L+I EY L L
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 138 -FSLIKDIQILFRKKKT--DIKASNILLDDKWIPKIADFGMARLFPEDQTHV---NTRVA 191
+ + K + L K D+ A NILL I KI DFG+AR D +V N R+
Sbjct: 174 SYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLP 233
Query: 192 GTNGYMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKK 251
+MAPE + + + ++DV+S+G+ + EL S + + VD++ YK+ K
Sbjct: 234 VK--WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-----FYKMIK- 285
Query: 252 DKSLEIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVVVMLSKK 302
+ ++ P A ++ D I C DP RPT +++V ++ K+
Sbjct: 286 -EGFRMLSPEHAPAEMYD-------IMKTCWDADPLKRPTFKQIVQLIEKQ 328
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 144/336 (42%), Gaps = 76/336 (22%)
Query: 20 SREGDNEE--DLEKIAAREQKHFPFEALVSATKNFHPSNKLGEGGFGPVFK------GKL 71
S EG++ D ++ E+ FP N LG G FG V + GK
Sbjct: 6 SYEGNSYTFIDPTQLPYNEKWEFP-------RNNLQFGKTLGAGAFGKVVEATAFGLGKE 58
Query: 72 DDGREIAVKKLSHSSNQGKKE-FENEAKLLARV-QHRNVVNLLGYCAHGAEKLLIYEYVI 129
D ++AVK L +++ +KE +E K+++ + QH N+VNLLG C HG L+I EY
Sbjct: 59 DAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCC 118
Query: 130 N-------------------------ESLDK-----------VLFSLIKDIQILFRKKKT 153
E LDK + FS + F K
Sbjct: 119 YGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKN 178
Query: 154 ----DIKASNILLDDKWIPKIADFGMARLFPEDQTHV---NTRVAGTNGYMAPEYVMHGH 206
D+ A N+LL + + KI DFG+AR D ++ N R+ +MAPE +
Sbjct: 179 CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK--WMAPESIFDCV 236
Query: 207 LSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASD 266
+V++DV+S+G+++ E+ S N + V+++ YKL K ++ P+ A +
Sbjct: 237 YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK-----FYKLVK--DGYQMAQPAFAPKN 289
Query: 267 SGDQIAMCIQIGLLCTQGDPQLRPTMRRVVVMLSKK 302
+ C + +P RPT +++ L ++
Sbjct: 290 IYSIMQACWAL-------EPTHRPTFQQICSFLQEQ 318
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 40/218 (18%)
Query: 57 KLGEGGFGPVFKGKL------DDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVN 110
+LGEG FG VF + D +AVK L + +K+F+ EA+LL +QH ++V
Sbjct: 22 ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVK 81
Query: 111 LLGYCAHGAEKLLIYEYVINESLDKVLFSLIKDIQILF----RKKK-------------- 152
G C G ++++EY+ + L+K L + D IL R+ K
Sbjct: 82 FYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQ 141
Query: 153 ---------------TDIKASNILLDDKWIPKIADFGMAR-LFPEDQTHVNTRVAGTNGY 196
D+ N L+ + KI DFGM+R ++ D V +
Sbjct: 142 IASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRW 201
Query: 197 MAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNL 234
M PE +M+ + ++DV+SFGV++ E+ + + F L
Sbjct: 202 MPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQL 239
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 126/291 (43%), Gaps = 62/291 (21%)
Query: 58 LGEGGFGPVFKG------KLDDGREIAVKKLSHSSNQGKKE-FENEAKLLARV-QHRNVV 109
LG G FG V + K D +AVK L S++ ++E +E K+L+ + H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 110 NLLGYCAHGAEKLLIYEYVINESLDKVL-------------------------------- 137
NLLG C G L+I EY L L
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 138 -FSLIKDIQILFRKKKT--DIKASNILLDDKWIPKIADFGMARLFPEDQTHV---NTRVA 191
+ + K + L K D+ A NILL I KI DFG+AR D +V N R+
Sbjct: 174 SYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 233
Query: 192 GTNGYMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKK 251
+MAPE + + + ++DV+S+G+ + EL S + + VD++ YK+ K
Sbjct: 234 VK--WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-----FYKMIK- 285
Query: 252 DKSLEIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVVVMLSKK 302
+ ++ P A ++ D I C DP RPT +++V ++ K+
Sbjct: 286 -EGFRMLSPEHAPAEMYD-------IMKTCWDADPLKRPTFKQIVQLIEKQ 328
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 126/291 (43%), Gaps = 62/291 (21%)
Query: 58 LGEGGFGPVFKG------KLDDGREIAVKKLSHSSNQGKKE-FENEAKLLARV-QHRNVV 109
LG G FG V + K D +AVK L S++ ++E +E K+L+ + H N+V
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 110 NLLGYCAHGAEKLLIYEYVINESLDKVL-------------------------------- 137
NLLG C G L+I EY L L
Sbjct: 109 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 168
Query: 138 -FSLIKDIQILFRKKKT--DIKASNILLDDKWIPKIADFGMARLFPEDQTHV---NTRVA 191
+ + K + L K D+ A NILL I KI DFG+AR D +V N R+
Sbjct: 169 SYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 228
Query: 192 GTNGYMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKK 251
+MAPE + + + ++DV+S+G+ + EL S + + VD++ YK+ K
Sbjct: 229 VK--WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-----FYKMIK- 280
Query: 252 DKSLEIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVVVMLSKK 302
+ ++ P A ++ D I C DP RPT +++V ++ K+
Sbjct: 281 -EGFRMLSPEHAPAEMYD-------IMKTCWDADPLKRPTFKQIVQLIEKQ 323
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 126/291 (43%), Gaps = 62/291 (21%)
Query: 58 LGEGGFGPVFKG------KLDDGREIAVKKLSHSSNQGKKE-FENEAKLLARV-QHRNVV 109
LG G FG V + K D +AVK L S++ ++E +E K+L+ + H N+V
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 110 NLLGYCAHGAEKLLIYEYVINESLDKVL-------------------------------- 137
NLLG C G L+I EY L L
Sbjct: 107 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 166
Query: 138 -FSLIKDIQILFRKKKT--DIKASNILLDDKWIPKIADFGMARLFPEDQTHV---NTRVA 191
+ + K + L K D+ A NILL I KI DFG+AR D +V N R+
Sbjct: 167 SYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 226
Query: 192 GTNGYMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKK 251
+MAPE + + + ++DV+S+G+ + EL S + + VD++ YK+ K
Sbjct: 227 VK--WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-----FYKMIK- 278
Query: 252 DKSLEIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVVVMLSKK 302
+ ++ P A ++ D I C DP RPT +++V ++ K+
Sbjct: 279 -EGFRMLSPEHAPAEMYD-------IMKTCWDADPLKRPTFKQIVQLIEKQ 321
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 111/220 (50%), Gaps = 32/220 (14%)
Query: 41 PFEALVSATKNFHPS-----NKLGEGGFGPVFKG--KLDDGRE---IAVKKLSHSSNQGK 90
P +A++ T HPS +G G FG V+KG K G++ +A+K L + +
Sbjct: 30 PNQAVLKFTTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQ 89
Query: 91 K-EFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVL------FSLIKD 143
+ +F EA ++ + H N++ L G + ++I EY+ N +LDK L FS+++
Sbjct: 90 RVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQL 149
Query: 144 IQIL------------FRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVA 191
+ +L D+ A NIL++ + K++DFG++R+ +D T
Sbjct: 150 VGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSG 209
Query: 192 GTNG--YMAPEYVMHGHLSVKADVFSFGVVILELIS-GQR 228
G + APE + + + +DV+SFG+V+ E+++ G+R
Sbjct: 210 GKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGER 249
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 126/291 (43%), Gaps = 62/291 (21%)
Query: 58 LGEGGFGPVFKG------KLDDGREIAVKKLSHSSNQGKKE-FENEAKLLARV-QHRNVV 109
LG G FG V + K D +AVK L S++ ++E +E K+L+ + H N+V
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 110 NLLGYCAHGAEKLLIYEYVINESLDKVL-------------------------------- 137
NLLG C G L+I EY L L
Sbjct: 91 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150
Query: 138 -FSLIKDIQILFRKKKT--DIKASNILLDDKWIPKIADFGMARLFPEDQTHV---NTRVA 191
+ + K + L K D+ A NILL I KI DFG+AR D +V N R+
Sbjct: 151 SYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 210
Query: 192 GTNGYMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKK 251
+MAPE + + + ++DV+S+G+ + EL S + + VD++ YK+ K
Sbjct: 211 VK--WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-----FYKMIK- 262
Query: 252 DKSLEIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVVVMLSKK 302
+ ++ P A ++ D I C DP RPT +++V ++ K+
Sbjct: 263 -EGFRMLSPEHAPAEMYD-------IMKTCWDADPLKRPTFKQIVQLIEKQ 305
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 37/215 (17%)
Query: 57 KLGEGGFGPVFKGKL------DDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVN 110
+LGEG FG VF + D +AVK L +S+ +K+F EA+LL +QH ++V
Sbjct: 20 ELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVK 79
Query: 111 LLGYCAHGAEKLLIYEYVINESLDKVLFSLIKDI---------------QILFRKKKT-- 153
G C G ++++EY+ + L+K L + D Q+L ++
Sbjct: 80 FYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAA 139
Query: 154 -------------DIKASNILLDDKWIPKIADFGMAR-LFPEDQTHVNTRVAGTNGYMAP 199
D+ N L+ + + KI DFGM+R ++ D V +M P
Sbjct: 140 GMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPP 199
Query: 200 EYVMHGHLSVKADVFSFGVVILELISGQRNSSFNL 234
E +M+ + ++DV+S GVV+ E+ + + + L
Sbjct: 200 ESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQL 234
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 129/273 (47%), Gaps = 46/273 (16%)
Query: 58 LGEGGFGPVFKG--KLDDGREI--AVKKL-SHSSNQGKKEFENEAKLLARVQHRNVVNLL 112
+G G FG V G KL REI A+K L S + + +++F +EA ++ + H NV++L
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 100
Query: 113 GYCAHGAEKLLIYEYVINESLDKVL------FSLIKDIQIL------------FRKKKTD 154
G ++I E++ N SLD L F++I+ + +L D
Sbjct: 101 GVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRD 160
Query: 155 IKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNG-----YMAPEYVMHGHLSV 209
+ A NIL++ + K++DFG++R F ED T T + G + APE + + +
Sbjct: 161 LAARNILVNSNLVCKVSDFGLSR-FLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTS 219
Query: 210 KADVFSFGVVILELIS-GQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSG 268
+DV+S+G+V+ E++S G+R + D N ++ Y+L P +
Sbjct: 220 ASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRL----------PPPM------ 263
Query: 269 DQIAMCIQIGLLCTQGDPQLRPTMRRVVVMLSK 301
D + Q+ L C Q D RP ++V L K
Sbjct: 264 DCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDK 296
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 130/280 (46%), Gaps = 45/280 (16%)
Query: 58 LGEGGFGPVFKG--KLDDGREIAVK----KLSHSSNQGKKEFENEAKLLARVQHRNVVNL 111
+G G FG V G KL +EI+V K+ ++ Q +++F EA ++ + H N++ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDHPNIIRL 111
Query: 112 LGYCAHGAEKLLIYEYVINESLDKVL------FSLIKDIQIL------------FRKKKT 153
G +++ EY+ N SLD L F++I+ + +L
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHR 171
Query: 154 DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGT--NGYMAPEYVMHGHLSVKA 211
D+ A NIL++ + K++DFG+AR+ +D T G + +PE + + + +
Sbjct: 172 DLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 231
Query: 212 DVFSFGVVILELIS-GQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQ 270
DV+S+G+V+ E++S G+R + D +D Y+L P + D
Sbjct: 232 DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL----------PPPM------DC 275
Query: 271 IAMCIQIGLLCTQGDPQLRPTMRRVVVMLSKK-PGPGNLE 309
A Q+ L C Q D RP ++V +L K PG+L+
Sbjct: 276 PAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLK 315
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 130/280 (46%), Gaps = 45/280 (16%)
Query: 58 LGEGGFGPVFKG--KLDDGREIAVK----KLSHSSNQGKKEFENEAKLLARVQHRNVVNL 111
+G G FG V G KL +EI+V K+ ++ Q +++F EA ++ + H N++ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDHPNIIRL 111
Query: 112 LGYCAHGAEKLLIYEYVINESLDKVL------FSLIKDIQIL------------FRKKKT 153
G +++ EY+ N SLD L F++I+ + +L
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHR 171
Query: 154 DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNG--YMAPEYVMHGHLSVKA 211
D+ A NIL++ + K++DFG++R+ +D T G + +PE + + + +
Sbjct: 172 DLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 231
Query: 212 DVFSFGVVILELIS-GQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQ 270
DV+S+G+V+ E++S G+R + D +D Y+L P + D
Sbjct: 232 DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL----------PPPM------DC 275
Query: 271 IAMCIQIGLLCTQGDPQLRPTMRRVVVMLSKK-PGPGNLE 309
A Q+ L C Q D RP ++V +L K PG+L+
Sbjct: 276 PAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLK 315
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 130/280 (46%), Gaps = 45/280 (16%)
Query: 58 LGEGGFGPVFKG--KLDDGREIAVK----KLSHSSNQGKKEFENEAKLLARVQHRNVVNL 111
+G G FG V G KL +EI+V K+ ++ Q +++F EA ++ + H N++ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDHPNIIRL 111
Query: 112 LGYCAHGAEKLLIYEYVINESLDKVL------FSLIKDIQIL------------FRKKKT 153
G +++ EY+ N SLD L F++I+ + +L
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHR 171
Query: 154 DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGT--NGYMAPEYVMHGHLSVKA 211
D+ A NIL++ + K++DFG++R+ +D T G + +PE + + + +
Sbjct: 172 DLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 231
Query: 212 DVFSFGVVILELIS-GQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQ 270
DV+S+G+V+ E++S G+R + D +D Y+L P + D
Sbjct: 232 DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL----------PPPM------DC 275
Query: 271 IAMCIQIGLLCTQGDPQLRPTMRRVVVMLSKK-PGPGNLE 309
A Q+ L C Q D RP ++V +L K PG+L+
Sbjct: 276 PAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLK 315
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 130/280 (46%), Gaps = 45/280 (16%)
Query: 58 LGEGGFGPVFKG--KLDDGREIAVK----KLSHSSNQGKKEFENEAKLLARVQHRNVVNL 111
+G G FG V G KL +EI+V K+ ++ Q +++F EA ++ + H N++ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDHPNIIRL 111
Query: 112 LGYCAHGAEKLLIYEYVINESLDKVL------FSLIKDIQIL------------FRKKKT 153
G +++ EY+ N SLD L F++I+ + +L
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHR 171
Query: 154 DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGT--NGYMAPEYVMHGHLSVKA 211
D+ A NIL++ + K++DFG++R+ +D T G + +PE + + + +
Sbjct: 172 DLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 231
Query: 212 DVFSFGVVILELIS-GQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQ 270
DV+S+G+V+ E++S G+R + D +D Y+L P + D
Sbjct: 232 DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL----------PPPM------DC 275
Query: 271 IAMCIQIGLLCTQGDPQLRPTMRRVVVMLSKK-PGPGNLE 309
A Q+ L C Q D RP ++V +L K PG+L+
Sbjct: 276 PAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLK 315
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 130/280 (46%), Gaps = 45/280 (16%)
Query: 58 LGEGGFGPVFKG--KLDDGREIAVK----KLSHSSNQGKKEFENEAKLLARVQHRNVVNL 111
+G G FG V G KL +EI+V K+ ++ Q +++F EA ++ + H N++ L
Sbjct: 51 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDHPNIIRL 109
Query: 112 LGYCAHGAEKLLIYEYVINESLDKVL------FSLIKDIQIL------------FRKKKT 153
G +++ EY+ N SLD L F++I+ + +L
Sbjct: 110 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHR 169
Query: 154 DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGT--NGYMAPEYVMHGHLSVKA 211
D+ A NIL++ + K++DFG++R+ +D T G + +PE + + + +
Sbjct: 170 DLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 229
Query: 212 DVFSFGVVILELIS-GQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQ 270
DV+S+G+V+ E++S G+R + D +D Y+L P + D
Sbjct: 230 DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL----------PPPM------DC 273
Query: 271 IAMCIQIGLLCTQGDPQLRPTMRRVVVMLSK-KPGPGNLE 309
A Q+ L C Q D RP ++V +L K PG+L+
Sbjct: 274 PAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLK 313
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 130/280 (46%), Gaps = 45/280 (16%)
Query: 58 LGEGGFGPVFKG--KLDDGREIAVK----KLSHSSNQGKKEFENEAKLLARVQHRNVVNL 111
+G G FG V G KL +EI+V K+ ++ Q +++F EA ++ + H N++ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDHPNIIRL 111
Query: 112 LGYCAHGAEKLLIYEYVINESLDKVL------FSLIKDIQIL------------FRKKKT 153
G +++ EY+ N SLD L F++I+ + +L
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHR 171
Query: 154 DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGT--NGYMAPEYVMHGHLSVKA 211
D+ A NIL++ + K++DFG++R+ +D T G + +PE + + + +
Sbjct: 172 DLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 231
Query: 212 DVFSFGVVILELIS-GQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQ 270
DV+S+G+V+ E++S G+R + D +D Y+L P + D
Sbjct: 232 DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL----------PPPM------DC 275
Query: 271 IAMCIQIGLLCTQGDPQLRPTMRRVVVMLSK-KPGPGNLE 309
A Q+ L C Q D RP ++V +L K PG+L+
Sbjct: 276 PAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLK 315
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 128/271 (47%), Gaps = 44/271 (16%)
Query: 58 LGEGGFGPVFKG--KLDDGREIAVK----KLSHSSNQGKKEFENEAKLLARVQHRNVVNL 111
+G G FG V G KL R++AV K+ ++ Q +++F EA ++ + H NVV+L
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQ-RRDFLCEASIMGQFDHPNVVHL 109
Query: 112 LGYCAHGAEKLLIYEYVINESLDKVL------FSLIKDIQIL------------FRKKKT 153
G G +++ E++ N +LD L F++I+ + +L
Sbjct: 110 EGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYVHR 169
Query: 154 DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGT--NGYMAPEYVMHGHLSVKA 211
D+ A NIL++ + K++DFG++R+ +D V T G + APE + + + +
Sbjct: 170 DLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSAS 229
Query: 212 DVFSFGVVILELIS-GQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQ 270
DV+S+G+V+ E++S G+R + D ++ Y+L P+ +G
Sbjct: 230 DVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRL-----------PAPMDCPAGLH 278
Query: 271 IAMCIQIGLLCTQGDPQLRPTMRRVVVMLSK 301
Q+ L C Q + RP ++V +L K
Sbjct: 279 -----QLMLDCWQKERAERPKFEQIVGILDK 304
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 131/287 (45%), Gaps = 45/287 (15%)
Query: 51 NFHPSNKLGEGGFGPVFKG--KLDDGREIAVK----KLSHSSNQGKKEFENEAKLLARVQ 104
N +G G FG V G KL +EI+V K+ ++ Q +++F EA ++ +
Sbjct: 34 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFD 92
Query: 105 HRNVVNLLGYCAHGAEKLLIYEYVINESLDKVL------FSLIKDIQIL----------- 147
H N++ L G +++ EY+ N SLD L F++I+ + +L
Sbjct: 93 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 152
Query: 148 -FRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGT--NGYMAPEYVMH 204
D+ A NIL++ + K++DFG++R+ +D T G + +PE + +
Sbjct: 153 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 212
Query: 205 GHLSVKADVFSFGVVILELIS-GQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLA 263
+ +DV+S+G+V+ E++S G+R + D +D Y+L P +
Sbjct: 213 RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL----------PPPM- 261
Query: 264 ASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVVVMLSK-KPGPGNLE 309
D A Q+ L C Q D RP ++V +L K PG+L+
Sbjct: 262 -----DCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLK 303
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 129/280 (46%), Gaps = 45/280 (16%)
Query: 58 LGEGGFGPVFKG--KLDDGREIAVK----KLSHSSNQGKKEFENEAKLLARVQHRNVVNL 111
+G G FG V G KL +EI+V K+ ++ Q +++F EA ++ + H N++ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDHPNIIRL 111
Query: 112 LGYCAHGAEKLLIYEYVINESLDKVL------FSLIKDIQIL------------FRKKKT 153
G +++ EY+ N SLD L F++I+ + +L
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHR 171
Query: 154 DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNG--YMAPEYVMHGHLSVKA 211
D+ A NIL++ + K++DFG+ R+ +D T G + +PE + + + +
Sbjct: 172 DLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 231
Query: 212 DVFSFGVVILELIS-GQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQ 270
DV+S+G+V+ E++S G+R + D +D Y+L P + D
Sbjct: 232 DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL----------PPPM------DC 275
Query: 271 IAMCIQIGLLCTQGDPQLRPTMRRVVVMLSKK-PGPGNLE 309
A Q+ L C Q D RP ++V +L K PG+L+
Sbjct: 276 PAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLK 315
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 132/282 (46%), Gaps = 49/282 (17%)
Query: 58 LGEGGFGPVFKG--KLDDGREIAVK----KLSHSSNQGKKEFENEAKLLARVQHRNVVNL 111
+G G FG V G KL +EI+V K+ ++ Q +++F EA ++ + H N++ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDHPNIIRL 111
Query: 112 LGYCAHGAEKLLIYEYVINESLDKVL------FSLIKDIQIL--------------FRKK 151
G +++ EY+ N SLD L F++I+ + +L F +
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGFVHR 171
Query: 152 KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNG--YMAPEYVMHGHLSV 209
D+ A NIL++ + K++DFG++R+ +D T G + +PE + + +
Sbjct: 172 --DLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTS 229
Query: 210 KADVFSFGVVILELIS-GQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSG 268
+DV+S+G+V+ E++S G+R + D +D Y+L P +
Sbjct: 230 ASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL----------PPPM------ 273
Query: 269 DQIAMCIQIGLLCTQGDPQLRPTMRRVVVMLSKK-PGPGNLE 309
D A Q+ L C Q D RP ++V +L K PG+L+
Sbjct: 274 DCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLK 315
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 131/287 (45%), Gaps = 45/287 (15%)
Query: 51 NFHPSNKLGEGGFGPVFKG--KLDDGREIAVK----KLSHSSNQGKKEFENEAKLLARVQ 104
N +G G FG V G KL +EI+V K+ ++ Q +++F EA ++ +
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFD 75
Query: 105 HRNVVNLLGYCAHGAEKLLIYEYVINESLDKVL------FSLIKDIQIL----------- 147
H N++ L G +++ EY+ N SLD L F++I+ + +L
Sbjct: 76 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 135
Query: 148 -FRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGT--NGYMAPEYVMH 204
D+ A NIL++ + K++DFG++R+ +D T G + +PE + +
Sbjct: 136 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 195
Query: 205 GHLSVKADVFSFGVVILELIS-GQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLA 263
+ +DV+S+G+V+ E++S G+R + D +D Y+L P +
Sbjct: 196 RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL----------PPPM- 244
Query: 264 ASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVVVMLSKK-PGPGNLE 309
D A Q+ L C Q D RP ++V +L K PG+L+
Sbjct: 245 -----DCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLK 286
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 31/196 (15%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
+LG G FG V+ G + ++AVK L S F EA L+ ++QH+ +V L Y
Sbjct: 28 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRL--YAV 84
Query: 117 HGAEKL-LIYEYVINESL--------------DKVL---------FSLIKDIQILFRKKK 152
E + +I EY+ N SL +K+L + I++ + R
Sbjct: 85 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR--- 141
Query: 153 TDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKAD 212
D++A+NIL+ D KIADFG+ARL +++ + APE + +G ++K+D
Sbjct: 142 -DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 200
Query: 213 VFSFGVVILELISGQR 228
V+SFG+++ E+++ R
Sbjct: 201 VWSFGILLTEIVTHGR 216
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 31/196 (15%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
+LG G FG V+ G + ++AVK L S F EA L+ ++QH+ +V L Y
Sbjct: 26 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRL--YAV 82
Query: 117 HGAEKL-LIYEYVINESL--------------DKVL---------FSLIKDIQILFRKKK 152
E + +I EY+ N SL +K+L + I++ + R
Sbjct: 83 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR--- 139
Query: 153 TDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKAD 212
D++A+NIL+ D KIADFG+ARL +++ + APE + +G ++K+D
Sbjct: 140 -DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 198
Query: 213 VFSFGVVILELISGQR 228
V+SFG+++ E+++ R
Sbjct: 199 VWSFGILLTEIVTHGR 214
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 31/196 (15%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
+LG G FG V+ G + ++AVK L S F EA L+ ++QH+ +V L Y
Sbjct: 29 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRL--YAV 85
Query: 117 HGAEKL-LIYEYVINESL--------------DKVL---------FSLIKDIQILFRKKK 152
E + +I EY+ N SL +K+L + I++ + R
Sbjct: 86 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR--- 142
Query: 153 TDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKAD 212
D++A+NIL+ D KIADFG+ARL +++ + APE + +G ++K+D
Sbjct: 143 -DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 201
Query: 213 VFSFGVVILELISGQR 228
V+SFG+++ E+++ R
Sbjct: 202 VWSFGILLTEIVTHGR 217
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 31/196 (15%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
+LG G FG V+ G + ++AVK L S F EA L+ ++QH+ +V L Y
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRL--YAV 76
Query: 117 HGAEKL-LIYEYVINESL--------------DKVL---------FSLIKDIQILFRKKK 152
E + +I EY+ N SL +K+L + I++ + R
Sbjct: 77 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR--- 133
Query: 153 TDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKAD 212
D++A+NIL+ D KIADFG+ARL +++ + APE + +G ++K+D
Sbjct: 134 -DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 213 VFSFGVVILELISGQR 228
V+SFG+++ E+++ R
Sbjct: 193 VWSFGILLTEIVTHGR 208
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 31/196 (15%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
+LG G FG V+ G + ++AVK L S F EA L+ ++QH+ +V L Y
Sbjct: 22 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRL--YAV 78
Query: 117 HGAEKL-LIYEYVINESL--------------DKVL---------FSLIKDIQILFRKKK 152
E + +I EY+ N SL +K+L + I++ + R
Sbjct: 79 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR--- 135
Query: 153 TDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKAD 212
D++A+NIL+ D KIADFG+ARL +++ + APE + +G ++K+D
Sbjct: 136 -DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 194
Query: 213 VFSFGVVILELISGQR 228
V+SFG+++ E+++ R
Sbjct: 195 VWSFGILLTEIVTHGR 210
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 128/273 (46%), Gaps = 46/273 (16%)
Query: 58 LGEGGFGPVFKG--KLDDGREI--AVKKL-SHSSNQGKKEFENEAKLLARVQHRNVVNLL 112
+G G FG V G KL REI A+K L S + + +++F +EA ++ + H NV++L
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 113 GYCAHGAEKLLIYEYVINESLDKVL------FSLIKDIQIL------------FRKKKTD 154
G ++I E++ N SLD L F++I+ + +L
Sbjct: 75 GVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRA 134
Query: 155 IKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNG-----YMAPEYVMHGHLSV 209
+ A NIL++ + K++DFG++R F ED T T + G + APE + + +
Sbjct: 135 LAARNILVNSNLVCKVSDFGLSR-FLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTS 193
Query: 210 KADVFSFGVVILELIS-GQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSG 268
+DV+S+G+V+ E++S G+R + D N ++ Y+L P +
Sbjct: 194 ASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRL----------PPPM------ 237
Query: 269 DQIAMCIQIGLLCTQGDPQLRPTMRRVVVMLSK 301
D + Q+ L C Q D RP ++V L K
Sbjct: 238 DCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDK 270
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 31/196 (15%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
+LG G FG V+ G + ++AVK L S F EA L+ ++QH+ +V L Y
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRL--YAV 76
Query: 117 HGAEKL-LIYEYVINESL--------------DKVL---------FSLIKDIQILFRKKK 152
E + +I EY+ N SL +K+L + I++ + R
Sbjct: 77 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR--- 133
Query: 153 TDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKAD 212
D++A+NIL+ D KIADFG+ARL +++ + APE + +G ++K+D
Sbjct: 134 -DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 213 VFSFGVVILELISGQR 228
V+SFG+++ E+++ R
Sbjct: 193 VWSFGILLTEIVTHGR 208
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 31/196 (15%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
+LG G FG V+ G + ++AVK L S F EA L+ ++QH+ +V L Y
Sbjct: 21 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRL--YAV 77
Query: 117 HGAEKL-LIYEYVINESL--------------DKVL---------FSLIKDIQILFRKKK 152
E + +I EY+ N SL +K+L + I++ + R
Sbjct: 78 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR--- 134
Query: 153 TDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKAD 212
D++A+NIL+ D KIADFG+ARL +++ + APE + +G ++K+D
Sbjct: 135 -DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 193
Query: 213 VFSFGVVILELISGQR 228
V+SFG+++ E+++ R
Sbjct: 194 VWSFGILLTEIVTHGR 209
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 31/196 (15%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
+LG G FG V+ G + ++AVK L S F EA L+ ++QH+ +V L Y
Sbjct: 30 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRL--YAV 86
Query: 117 HGAEKL-LIYEYVINESL--------------DKVL---------FSLIKDIQILFRKKK 152
E + +I EY+ N SL +K+L + I++ + R
Sbjct: 87 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR--- 143
Query: 153 TDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKAD 212
D++A+NIL+ D KIADFG+ARL +++ + APE + +G ++K+D
Sbjct: 144 -DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 202
Query: 213 VFSFGVVILELISGQR 228
V+SFG+++ E+++ R
Sbjct: 203 VWSFGILLTEIVTHGR 218
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 31/196 (15%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
+LG G FG V+ G + ++AVK L S F EA L+ ++QH+ +V L Y
Sbjct: 26 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRL--YAV 82
Query: 117 HGAEKL-LIYEYVINESL--------------DKVL---------FSLIKDIQILFRKKK 152
E + +I EY+ N SL +K+L + I++ + R
Sbjct: 83 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR--- 139
Query: 153 TDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKAD 212
D++A+NIL+ D KIADFG+ARL +++ + APE + +G ++K+D
Sbjct: 140 -DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 198
Query: 213 VFSFGVVILELISGQR 228
V+SFG+++ E+++ R
Sbjct: 199 VWSFGILLTEIVTHGR 214
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 31/196 (15%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
+LG G FG V+ G + ++AVK L S F EA L+ ++QH+ +V L Y
Sbjct: 25 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRL--YAV 81
Query: 117 HGAEKL-LIYEYVINESL--------------DKVL---------FSLIKDIQILFRKKK 152
E + +I EY+ N SL +K+L + I++ + R
Sbjct: 82 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR--- 138
Query: 153 TDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKAD 212
D++A+NIL+ D KIADFG+ARL +++ + APE + +G ++K+D
Sbjct: 139 -DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 197
Query: 213 VFSFGVVILELISGQR 228
V+SFG+++ E+++ R
Sbjct: 198 VWSFGILLTEIVTHGR 213
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 31/196 (15%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
+LG G FG V+ G + ++AVK L S F EA L+ ++QH+ +V L Y
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRL--YAV 76
Query: 117 HGAEKL-LIYEYVINESL--------------DKVL---------FSLIKDIQILFRKKK 152
E + +I EY+ N SL +K+L + I++ + R
Sbjct: 77 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR--- 133
Query: 153 TDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKAD 212
D++A+NIL+ D KIADFG+ARL +++ + APE + +G ++K+D
Sbjct: 134 -DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 213 VFSFGVVILELISGQR 228
V+SFG+++ E+++ R
Sbjct: 193 VWSFGILLTEIVTHGR 208
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 31/196 (15%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
+LG G FG V+ G + ++AVK L S F EA L+ ++QH+ +V L Y
Sbjct: 15 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRL--YAV 71
Query: 117 HGAEKL-LIYEYVINESL--------------DKVL---------FSLIKDIQILFRKKK 152
E + +I EY+ N SL +K+L + I++ + R
Sbjct: 72 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR--- 128
Query: 153 TDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKAD 212
D++A+NIL+ D KIADFG+ARL +++ + APE + +G ++K+D
Sbjct: 129 -DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 187
Query: 213 VFSFGVVILELISGQR 228
V+SFG+++ E+++ R
Sbjct: 188 VWSFGILLTEIVTHGR 203
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 123/271 (45%), Gaps = 44/271 (16%)
Query: 58 LGEGGFGPVFKG--KLDDGREIAVK----KLSHSSNQGKKEFENEAKLLARVQHRNVVNL 111
+G G FG V G KL RE+ V K+ ++ Q +++F EA ++ + H N+++L
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDHPNIIHL 88
Query: 112 LGYCAHGAEKLLIYEYVINESLDKVL------FSLIKDIQIL------------FRKKKT 153
G +++ EY+ N SLD L F++I+ + +L
Sbjct: 89 EGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYVHR 148
Query: 154 DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNG--YMAPEYVMHGHLSVKA 211
D+ A NIL++ + K++DFG++R+ +D T G + APE + + +
Sbjct: 149 DLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSAS 208
Query: 212 DVFSFGVVILELIS-GQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQ 270
DV+S+G+V+ E++S G+R + D ++ Y+L PS D
Sbjct: 209 DVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGYRL-----------PS-----PMDC 252
Query: 271 IAMCIQIGLLCTQGDPQLRPTMRRVVVMLSK 301
A Q+ L C Q + RP +V ML K
Sbjct: 253 PAALYQLMLDCWQKERNSRPKFDEIVNMLDK 283
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 129/271 (47%), Gaps = 49/271 (18%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKK--EFENEAKLLARVQHRNVVNLLGY 114
K+G G FG V + + G ++AVK L ++ EF E ++ R++H N+V +G
Sbjct: 44 KIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 115 CAHGAEKLLIYEYVINESLDKVL------------------FSLIKDIQILFRKKKT--- 153
++ EY+ SL ++L + + K + L +
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVH 162
Query: 154 -DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTR-VAGTNGYMAPEYVMHGHLSVKA 211
++K+ N+L+D K+ K+ DFG++RL + T ++++ AGT +MAPE + + K+
Sbjct: 163 RNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAPEVLRDEPSNEKS 220
Query: 212 DVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEI---VDPSLAASDSG 268
DV+SFGV++ EL + Q+ NL+ AQ + +K K LEI ++P +AA G
Sbjct: 221 DVYSFGVILWELATLQQPWG-NLN-PAQVVAAVGFKC----KRLEIPRNLNPQVAAIIEG 274
Query: 269 DQIAMCIQIGLLCTQGDPQLRPTMRRVVVML 299
C +P RP+ ++ +L
Sbjct: 275 ------------CWTNEPWKRPSFATIMDLL 293
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 128/270 (47%), Gaps = 42/270 (15%)
Query: 58 LGEGGFGPVFKGKLD--DGREI--AVKKL-SHSSNQGKKEFENEAKLLARVQHRNVVNLL 112
+G G FG V G+L REI A+K L + +++ +++F +EA ++ + H N+++L
Sbjct: 37 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 96
Query: 113 GYCAHGAEKLLIYEYVINESLDKVL------FSLIKDIQIL------------FRKKKTD 154
G ++I EY+ N SLD L F++I+ + +L D
Sbjct: 97 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSAVHRD 156
Query: 155 IKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGT--NGYMAPEYVMHGHLSVKAD 212
+ A NIL++ + K++DFGM+R+ +D T G + APE + + + +D
Sbjct: 157 LAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASD 216
Query: 213 VFSFGVVILELIS-GQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQI 271
V+S+G+V+ E++S G+R + D ++ Y+L +D +A
Sbjct: 217 VWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPP------MDCPIALH------ 264
Query: 272 AMCIQIGLLCTQGDPQLRPTMRRVVVMLSK 301
Q+ L C Q + RP ++V ML K
Sbjct: 265 ----QLMLDCWQKERSDRPKFGQIVNMLDK 290
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 27/191 (14%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
+LG G FG V GK ++A+K + S + EF EAK++ + H +V L G C
Sbjct: 31 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 117 HGAEKLLIYEYVINESL------------DKVLFSLIKDI----------QILFRKKKTD 154
+I EY+ N L + L + KD+ Q L R D
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR----D 145
Query: 155 IKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVF 214
+ A N L++D+ + K++DFG++R +D+ + + PE +M+ S K+D++
Sbjct: 146 LAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 205
Query: 215 SFGVVILELIS 225
+FGV++ E+ S
Sbjct: 206 AFGVLMWEIYS 216
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 27/191 (14%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
+LG G FG V GK ++A+K + S + EF EAK++ + H +V L G C
Sbjct: 31 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 117 HGAEKLLIYEYVINESL------------DKVLFSLIKDI----------QILFRKKKTD 154
+I EY+ N L + L + KD+ Q L R D
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR----D 145
Query: 155 IKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVF 214
+ A N L++D+ + K++DFG++R +D+ + + PE +M+ S K+D++
Sbjct: 146 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 205
Query: 215 SFGVVILELIS 225
+FGV++ E+ S
Sbjct: 206 AFGVLMWEIYS 216
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 94/188 (50%), Gaps = 20/188 (10%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
+LG G FG V+ G ++ ++AVK L + + F EA L+ +QH +V L
Sbjct: 20 RLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 117 HGAEKLLIYEYVINESL---------DKVLFSLIKDIQ------ILFRKKKT----DIKA 157
+I EY+ SL KVL + D + + ++K D++A
Sbjct: 79 REEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRA 138
Query: 158 SNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFG 217
+N+L+ + + KIADFG+AR+ +++ + APE + G ++K+DV+SFG
Sbjct: 139 ANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFG 198
Query: 218 VVILELIS 225
+++ E+++
Sbjct: 199 ILLYEIVT 206
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 124/270 (45%), Gaps = 47/270 (17%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKK--EFENEAKLLARVQHRNVVNLLGY 114
K+G G FG V + + G ++AVK L ++ EF E ++ R++H N+V +G
Sbjct: 44 KIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 115 CAHGAEKLLIYEYVINESLDKVL------------------FSLIKDIQILFRKKKT--- 153
++ EY+ SL ++L + + K + L +
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVH 162
Query: 154 -DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKAD 212
D+K+ N+L+D K+ K+ DFG++RL + AGT +MAPE + + K+D
Sbjct: 163 RDLKSPNLLVDKKYTVKVCDFGLSRL-KASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSD 221
Query: 213 VFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEI---VDPSLAASDSGD 269
V+SFGV++ EL + Q+ NL+ AQ + +K K LEI ++P +AA G
Sbjct: 222 VYSFGVILWELATLQQPWG-NLN-PAQVVAAVGFKC----KRLEIPRNLNPQVAAIIEG- 274
Query: 270 QIAMCIQIGLLCTQGDPQLRPTMRRVVVML 299
C +P RP+ ++ +L
Sbjct: 275 -----------CWTNEPWKRPSFATIMDLL 293
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 27/191 (14%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
+LG G FG V GK ++A+K + S + EF EAK++ + H +V L G C
Sbjct: 22 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT 80
Query: 117 HGAEKLLIYEYVINESL------------DKVLFSLIKDI----------QILFRKKKTD 154
+I EY+ N L + L + KD+ Q L R D
Sbjct: 81 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR----D 136
Query: 155 IKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVF 214
+ A N L++D+ + K++DFG++R +D+ + + PE +M+ S K+D++
Sbjct: 137 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 196
Query: 215 SFGVVILELIS 225
+FGV++ E+ S
Sbjct: 197 AFGVLMWEIYS 207
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 129/280 (46%), Gaps = 45/280 (16%)
Query: 58 LGEGGFGPVFKG--KLDDGREIAVK----KLSHSSNQGKKEFENEAKLLARVQHRNVVNL 111
+G G FG V G KL +EI+V K+ ++ Q +++F EA ++ + H N++ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDHPNIIRL 111
Query: 112 LGYCAHGAEKLLIYEYVINESLDKVL------FSLIKDIQIL------------FRKKKT 153
G +++ E + N SLD L F++I+ + +L
Sbjct: 112 EGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGAVHR 171
Query: 154 DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNG--YMAPEYVMHGHLSVKA 211
D+ A NIL++ + K++DFG++R+ +D T G + +PE + + + +
Sbjct: 172 DLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 231
Query: 212 DVFSFGVVILELIS-GQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQ 270
DV+S+G+V+ E++S G+R + D +D Y+L P + D
Sbjct: 232 DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL----------PPPM------DC 275
Query: 271 IAMCIQIGLLCTQGDPQLRPTMRRVVVMLSK-KPGPGNLE 309
A Q+ L C Q D RP ++V +L K PG+L+
Sbjct: 276 PAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLK 315
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 27/191 (14%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
+LG G FG V GK ++A+K + S + EF EAK++ + H +V L G C
Sbjct: 16 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 117 HGAEKLLIYEYVINESL------------DKVLFSLIKDI----------QILFRKKKTD 154
+I EY+ N L + L + KD+ Q L R D
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR----D 130
Query: 155 IKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVF 214
+ A N L++D+ + K++DFG++R +D+ + + PE +M+ S K+D++
Sbjct: 131 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 190
Query: 215 SFGVVILELIS 225
+FGV++ E+ S
Sbjct: 191 AFGVLMWEIYS 201
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 27/191 (14%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
+LG G FG V GK ++A+K + S + EF EAK++ + H +V L G C
Sbjct: 15 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT 73
Query: 117 HGAEKLLIYEYVINESL------------DKVLFSLIKDI----------QILFRKKKTD 154
+I EY+ N L + L + KD+ Q L R D
Sbjct: 74 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR----D 129
Query: 155 IKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVF 214
+ A N L++D+ + K++DFG++R +D+ + + PE +M+ S K+D++
Sbjct: 130 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 189
Query: 215 SFGVVILELIS 225
+FGV++ E+ S
Sbjct: 190 AFGVLMWEIYS 200
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 27/191 (14%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
+LG G FG V GK ++A+K + S + EF EAK++ + H +V L G C
Sbjct: 11 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 117 HGAEKLLIYEYVINESL------------DKVLFSLIKDI----------QILFRKKKTD 154
+I EY+ N L + L + KD+ Q L R D
Sbjct: 70 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR----D 125
Query: 155 IKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVF 214
+ A N L++D+ + K++DFG++R +D+ + + PE +M+ S K+D++
Sbjct: 126 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 185
Query: 215 SFGVVILELIS 225
+FGV++ E+ S
Sbjct: 186 AFGVLMWEIYS 196
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 128/270 (47%), Gaps = 42/270 (15%)
Query: 58 LGEGGFGPVFKGKLD--DGREI--AVKKL-SHSSNQGKKEFENEAKLLARVQHRNVVNLL 112
+G G FG V G+L REI A+K L + +++ +++F +EA ++ + H N+++L
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 81
Query: 113 GYCAHGAEKLLIYEYVINESLDKVL------FSLIKDIQIL------------FRKKKTD 154
G ++I EY+ N SLD L F++I+ + +L D
Sbjct: 82 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHRD 141
Query: 155 IKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGT--NGYMAPEYVMHGHLSVKAD 212
+ A NIL++ + K++DFGM+R+ +D T G + APE + + + +D
Sbjct: 142 LAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASD 201
Query: 213 VFSFGVVILELIS-GQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQI 271
V+S+G+V+ E++S G+R + D ++ Y+L +D +A
Sbjct: 202 VWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPP------MDCPIALH------ 249
Query: 272 AMCIQIGLLCTQGDPQLRPTMRRVVVMLSK 301
Q+ L C Q + RP ++V ML K
Sbjct: 250 ----QLMLDCWQKERSDRPKFGQIVNMLDK 275
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 128/270 (47%), Gaps = 42/270 (15%)
Query: 58 LGEGGFGPVFKGKLD--DGREI--AVKKL-SHSSNQGKKEFENEAKLLARVQHRNVVNLL 112
+G G FG V G+L REI A+K L + +++ +++F +EA ++ + H N+++L
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 75
Query: 113 GYCAHGAEKLLIYEYVINESLDKVL------FSLIKDIQIL------------FRKKKTD 154
G ++I EY+ N SLD L F++I+ + +L D
Sbjct: 76 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHRD 135
Query: 155 IKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGT--NGYMAPEYVMHGHLSVKAD 212
+ A NIL++ + K++DFGM+R+ +D T G + APE + + + +D
Sbjct: 136 LAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASD 195
Query: 213 VFSFGVVILELIS-GQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQI 271
V+S+G+V+ E++S G+R + D ++ Y+L +D +A
Sbjct: 196 VWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPP------MDCPIALH------ 243
Query: 272 AMCIQIGLLCTQGDPQLRPTMRRVVVMLSK 301
Q+ L C Q + RP ++V ML K
Sbjct: 244 ----QLMLDCWQKERSDRPKFGQIVNMLDK 269
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 129/280 (46%), Gaps = 45/280 (16%)
Query: 58 LGEGGFGPVFKG--KLDDGREIAVK----KLSHSSNQGKKEFENEAKLLARVQHRNVVNL 111
+G G FG V G KL +EI+V K+ ++ Q +++F EA ++ + H N++ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDHPNIIRL 111
Query: 112 LGYCAHGAEKLLIYEYVINESLDKVL------FSLIKDIQIL------------FRKKKT 153
G +++ E + N SLD L F++I+ + +L
Sbjct: 112 EGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHR 171
Query: 154 DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGT--NGYMAPEYVMHGHLSVKA 211
D+ A NIL++ + K++DFG++R+ +D T G + +PE + + + +
Sbjct: 172 DLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 231
Query: 212 DVFSFGVVILELIS-GQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQ 270
DV+S+G+V+ E++S G+R + D +D Y+L P + D
Sbjct: 232 DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL----------PPPM------DC 275
Query: 271 IAMCIQIGLLCTQGDPQLRPTMRRVVVMLSKK-PGPGNLE 309
A Q+ L C Q D RP ++V +L K PG+L+
Sbjct: 276 PAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLK 315
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 99/196 (50%), Gaps = 31/196 (15%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
+LG G FG V+ G + ++AVK L S F EA L+ ++QH+ +V L Y
Sbjct: 16 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRL--YAV 72
Query: 117 HGAEKL-LIYEYVINESL--------------DKVL---------FSLIKDIQILFRKKK 152
E + +I EY+ N SL +K+L + I++ + R
Sbjct: 73 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR--- 129
Query: 153 TDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKAD 212
+++A+NIL+ D KIADFG+ARL +++ + APE + +G ++K+D
Sbjct: 130 -NLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 188
Query: 213 VFSFGVVILELISGQR 228
V+SFG+++ E+++ R
Sbjct: 189 VWSFGILLTEIVTHGR 204
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 27/191 (14%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
+LG G FG V GK ++A+K + S + EF EAK++ + H +V L G C
Sbjct: 16 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 117 HGAEKLLIYEYVINESL------------DKVLFSLIKDI----------QILFRKKKTD 154
+I EY+ N L + L + KD+ Q L R D
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR----D 130
Query: 155 IKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVF 214
+ A N L++D+ + K++DFG++R +D+ + + PE +M+ S K+D++
Sbjct: 131 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIW 190
Query: 215 SFGVVILELIS 225
+FGV++ E+ S
Sbjct: 191 AFGVLMWEIYS 201
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 130/287 (45%), Gaps = 45/287 (15%)
Query: 51 NFHPSNKLGEGGFGPVFKG--KLDDGREIAVK----KLSHSSNQGKKEFENEAKLLARVQ 104
N +G G FG V G KL +EI+V K+ ++ Q +++F EA ++ +
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFD 75
Query: 105 HRNVVNLLGYCAHGAEKLLIYEYVINESLDKVL------FSLIKDIQIL----------- 147
H N++ L G +++ E + N SLD L F++I+ + +L
Sbjct: 76 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 135
Query: 148 -FRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGT--NGYMAPEYVMH 204
D+ A NIL++ + K++DFG++R+ +D T G + +PE + +
Sbjct: 136 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 195
Query: 205 GHLSVKADVFSFGVVILELIS-GQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLA 263
+ +DV+S+G+V+ E++S G+R + D +D Y+L P +
Sbjct: 196 RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL----------PPPM- 244
Query: 264 ASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVVVMLSK-KPGPGNLE 309
D A Q+ L C Q D RP ++V +L K PG+L+
Sbjct: 245 -----DCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLK 286
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 95/196 (48%), Gaps = 31/196 (15%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
KLG+G FG V+ G + +A+K L + F EA+++ +++H +V L Y
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKIRHEKLVQL--YAV 81
Query: 117 HGAEKL-LIYEYVINESLDKVL-----------------------FSLIKDIQILFRKKK 152
E + ++ EY+ SL L + ++ + + R
Sbjct: 82 VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR--- 138
Query: 153 TDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKAD 212
D++A+NIL+ + + K+ADFG+ARL +++ + APE ++G ++K+D
Sbjct: 139 -DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 213 VFSFGVVILELISGQR 228
V+SFG+++ EL + R
Sbjct: 198 VWSFGILLTELTTKGR 213
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 95/196 (48%), Gaps = 31/196 (15%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
KLG+G FG V+ G + +A+K L N + F EA+++ +++H +V L Y
Sbjct: 192 KLGQGCFGEVWMGTWNGTTRVAIKTLK-PGNMSPEAFLQEAQVMKKLRHEKLVQL--YAV 248
Query: 117 HGAEKL-LIYEYVINESLDKVL-----------------------FSLIKDIQILFRKKK 152
E + ++ EY+ SL L + ++ + + R
Sbjct: 249 VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR--- 305
Query: 153 TDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKAD 212
D++A+NIL+ + + K+ADFG+ RL +++ + APE ++G ++K+D
Sbjct: 306 -DLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 364
Query: 213 VFSFGVVILELISGQR 228
V+SFG+++ EL + R
Sbjct: 365 VWSFGILLTELTTKGR 380
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 107/226 (47%), Gaps = 26/226 (11%)
Query: 49 TKNFHPSNKLGEGGFGPVFKGKL----DDGREIAVKKL-SHSSNQGKKEFENEAKLLARV 103
H +G G G V G+L +A+K L + + + +++F +EA ++ +
Sbjct: 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQF 107
Query: 104 QHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVL------FSLIKDIQIL---------- 147
H N++ L G G +++ EY+ N SLD L F++++ + +L
Sbjct: 108 DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYL 167
Query: 148 --FRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNG--YMAPEYVM 203
D+ A N+L+D + K++DFG++R+ +D T G + APE +
Sbjct: 168 SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIA 227
Query: 204 HGHLSVKADVFSFGVVILELISGQRNSSFNL-DVDAQNLLDWAYKL 248
S +DV+SFGVV+ E+++ +N+ + D + ++ Y+L
Sbjct: 228 FRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRL 273
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 96/196 (48%), Gaps = 31/196 (15%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
KLG+G FG V+ G + +A+K L + + F EA+++ +++H +V L Y
Sbjct: 15 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQL--YAV 71
Query: 117 HGAEKL-LIYEYVINESLDKVL-----------------------FSLIKDIQILFRKKK 152
E + ++ EY+ SL L + ++ + + R
Sbjct: 72 VSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR--- 128
Query: 153 TDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKAD 212
D++A+NIL+ + + K+ADFG+ARL +++ + APE ++G ++K+D
Sbjct: 129 -DLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 187
Query: 213 VFSFGVVILELISGQR 228
V+SFG+++ EL + R
Sbjct: 188 VWSFGILLTELTTKGR 203
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 96/196 (48%), Gaps = 31/196 (15%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
KLG+G FG V+ G + +A+K L + + F EA+++ +++H +V L Y
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQL--YAV 330
Query: 117 HGAEKL-LIYEYVINESLDKVL-----------------------FSLIKDIQILFRKKK 152
E + ++ EY+ SL L + ++ + + R
Sbjct: 331 VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR--- 387
Query: 153 TDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKAD 212
D++A+NIL+ + + K+ADFG+ARL +++ + APE ++G ++K+D
Sbjct: 388 -DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 446
Query: 213 VFSFGVVILELISGQR 228
V+SFG+++ EL + R
Sbjct: 447 VWSFGILLTELTTKGR 462
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 95/196 (48%), Gaps = 31/196 (15%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
KLG+G FG V+ G + +A+K L + F EA+++ +++H +V L Y
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 117 HGAEKL-LIYEYVINESLDKVL-----------------------FSLIKDIQILFRKKK 152
E + ++ EY+ SL L + ++ + + R
Sbjct: 82 VSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR--- 138
Query: 153 TDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKAD 212
D++A+NIL+ + + K+ADFG+ARL +++ + APE ++G ++K+D
Sbjct: 139 -DLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 213 VFSFGVVILELISGQR 228
V+SFG+++ EL + R
Sbjct: 198 VWSFGILLTELTTKGR 213
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 97/203 (47%), Gaps = 39/203 (19%)
Query: 58 LGEGGFGPVFKGKLDDGREIAVKKLSHSSN----QGKKEFENEAKLLARVQHRNVVNLLG 113
+G GGFG V++ G E+AVK H + Q + EAKL A ++H N++ L G
Sbjct: 15 IGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG 73
Query: 114 YCAHGAEKLLIYEYVINESLDKVLFS--LIKDIQILFRKKKT-----------------D 154
C L+ E+ L++VL + DI + + + D
Sbjct: 74 VCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRD 133
Query: 155 IKASNILLDDKW--------IPKIADFGMARLFPEDQTHVNTRV--AGTNGYMAPEYVMH 204
+K+SNIL+ K I KI DFG+AR + H T++ AG +MAPE +
Sbjct: 134 LKSSNILILQKVENGDLSNKILKITDFGLAR-----EWHRTTKMSAAGAYAWMAPEVIRA 188
Query: 205 GHLSVKADVFSFGVVILELISGQ 227
S +DV+S+GV++ EL++G+
Sbjct: 189 SMFSKGSDVWSYGVLLWELLTGE 211
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 107/226 (47%), Gaps = 26/226 (11%)
Query: 49 TKNFHPSNKLGEGGFGPVFKGKL----DDGREIAVKKL-SHSSNQGKKEFENEAKLLARV 103
H +G G G V G+L +A+K L + + + +++F +EA ++ +
Sbjct: 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQF 107
Query: 104 QHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVL------FSLIKDIQIL---------- 147
H N++ L G G +++ EY+ N SLD L F++++ + +L
Sbjct: 108 DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYL 167
Query: 148 --FRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGT--NGYMAPEYVM 203
D+ A N+L+D + K++DFG++R+ +D T G + APE +
Sbjct: 168 SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIA 227
Query: 204 HGHLSVKADVFSFGVVILELISGQRNSSFNL-DVDAQNLLDWAYKL 248
S +DV+SFGVV+ E+++ +N+ + D + ++ Y+L
Sbjct: 228 FRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRL 273
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 96/196 (48%), Gaps = 31/196 (15%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
KLG+G FG V+ G + +A+K L + + F EA+++ +++H +V L Y
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQL--YAV 247
Query: 117 HGAEKL-LIYEYVINESLDKVL-----------------------FSLIKDIQILFRKKK 152
E + ++ EY+ SL L + ++ + + R
Sbjct: 248 VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR--- 304
Query: 153 TDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKAD 212
D++A+NIL+ + + K+ADFG+ARL +++ + APE ++G ++K+D
Sbjct: 305 -DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 213 VFSFGVVILELISGQR 228
V+SFG+++ EL + R
Sbjct: 364 VWSFGILLTELTTKGR 379
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 96/196 (48%), Gaps = 31/196 (15%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
KLG+G FG V+ G + +A+K L + + F EA+++ +++H +V L Y
Sbjct: 16 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQL--YAV 72
Query: 117 HGAEKL-LIYEYVINESLDKVL-----------------------FSLIKDIQILFRKKK 152
E + ++ EY+ SL L + ++ + + R
Sbjct: 73 VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR--- 129
Query: 153 TDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKAD 212
D++A+NIL+ + + K+ADFG+ARL +++ + APE ++G ++K+D
Sbjct: 130 -DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 188
Query: 213 VFSFGVVILELISGQR 228
V+SFG+++ EL + R
Sbjct: 189 VWSFGILLTELTTKGR 204
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 95/196 (48%), Gaps = 31/196 (15%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
KLG+G FG V+ G + +A+K L + F EA+++ +++H +V L Y
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 117 HGAEKL-LIYEYVINESLDKVL-----------------------FSLIKDIQILFRKKK 152
E + ++ EY+ SL L + ++ + + R
Sbjct: 82 VSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR--- 138
Query: 153 TDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKAD 212
D++A+NIL+ + + K+ADFG+ARL +++ + APE ++G ++K+D
Sbjct: 139 -DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 213 VFSFGVVILELISGQR 228
V+SFG+++ EL + R
Sbjct: 198 VWSFGILLTELTTKGR 213
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 95/196 (48%), Gaps = 31/196 (15%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
KLG+G FG V+ G + +A+K L + F EA+++ +++H +V L Y
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 117 HGAEKL-LIYEYVINESLDKVL-----------------------FSLIKDIQILFRKKK 152
E + ++ EY+ SL L + ++ + + R
Sbjct: 82 VSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR--- 138
Query: 153 TDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKAD 212
D++A+NIL+ + + K+ADFG+ARL +++ + APE ++G ++K+D
Sbjct: 139 -DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 213 VFSFGVVILELISGQR 228
V+SFG+++ EL + R
Sbjct: 198 VWSFGILLTELTTKGR 213
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 96/196 (48%), Gaps = 31/196 (15%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
KLG+G FG V+ G + +A+K L + + F EA+++ +++H +V L Y
Sbjct: 18 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQL--YAV 74
Query: 117 HGAEKL-LIYEYVINESLDKVL-----------------------FSLIKDIQILFRKKK 152
E + ++ EY+ SL L + ++ + + R
Sbjct: 75 VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR--- 131
Query: 153 TDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKAD 212
D++A+NIL+ + + K+ADFG+ARL +++ + APE ++G ++K+D
Sbjct: 132 -DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 190
Query: 213 VFSFGVVILELISGQR 228
V+SFG+++ EL + R
Sbjct: 191 VWSFGILLTELTTKGR 206
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 95/196 (48%), Gaps = 31/196 (15%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
KLG+G FG V+ G + +A+K L + F EA+++ +++H +V L Y
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 117 HGAEKL-LIYEYVINESLDKVL-----------------------FSLIKDIQILFRKKK 152
E + ++ EY+ SL L + ++ + + R
Sbjct: 82 VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR--- 138
Query: 153 TDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKAD 212
D++A+NIL+ + + K+ADFG+ARL +++ + APE ++G ++K+D
Sbjct: 139 -DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 213 VFSFGVVILELISGQR 228
V+SFG+++ EL + R
Sbjct: 198 VWSFGILLTELTTKGR 213
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 96/196 (48%), Gaps = 31/196 (15%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
KLG+G FG V+ G + +A+K L + + F EA+++ +++H +V L Y
Sbjct: 14 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQL--YAV 70
Query: 117 HGAEKL-LIYEYVINESLDKVL-----------------------FSLIKDIQILFRKKK 152
E + ++ EY+ SL L + ++ + + R
Sbjct: 71 VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR--- 127
Query: 153 TDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKAD 212
D++A+NIL+ + + K+ADFG+ARL +++ + APE ++G ++K+D
Sbjct: 128 -DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 186
Query: 213 VFSFGVVILELISGQR 228
V+SFG+++ EL + R
Sbjct: 187 VWSFGILLTELTTKGR 202
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 96/196 (48%), Gaps = 31/196 (15%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
KLG+G FG V+ G + +A+K L + + F EA+++ +++H +V L Y
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQL--YAV 247
Query: 117 HGAEKL-LIYEYVINESLDKVL-----------------------FSLIKDIQILFRKKK 152
E + ++ EY+ SL L + ++ + + R
Sbjct: 248 VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR--- 304
Query: 153 TDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKAD 212
D++A+NIL+ + + K+ADFG+ARL +++ + APE ++G ++K+D
Sbjct: 305 -DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 213 VFSFGVVILELISGQR 228
V+SFG+++ EL + R
Sbjct: 364 VWSFGILLTELTTKGR 379
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 97/196 (49%), Gaps = 31/196 (15%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
+LG G FG V+ G + ++A+K L + + F EA+++ +++H +V L Y
Sbjct: 16 RLGNGQFGEVWMGTWNGNTKVAIKTLKPGT-MSPESFLEEAQIMKKLKHDKLVQL--YAV 72
Query: 117 HGAEKLLIYEYVINESLDK-VLFSLIKD---------------------IQILFRKKKT- 153
E + Y++ E ++K L +KD + + R
Sbjct: 73 VSEEPI----YIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIH 128
Query: 154 -DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKAD 212
D++++NIL+ + I KIADFG+ARL +++ + APE ++G ++K+D
Sbjct: 129 RDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 188
Query: 213 VFSFGVVILELISGQR 228
V+SFG+++ EL++ R
Sbjct: 189 VWSFGILLTELVTKGR 204
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 96/196 (48%), Gaps = 31/196 (15%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
KLG+G FG V+ G + +A+K L + + F EA+++ +++H +V L Y
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQL--YAV 78
Query: 117 HGAEKL-LIYEYVINESLDKVL-----------------------FSLIKDIQILFRKKK 152
E + ++ EY+ SL L + ++ + + R
Sbjct: 79 VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHR--- 135
Query: 153 TDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKAD 212
D++A+NIL+ + + K+ADFG+ARL +++ + APE ++G ++K+D
Sbjct: 136 -DLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSD 194
Query: 213 VFSFGVVILELISGQR 228
V+SFG+++ EL + R
Sbjct: 195 VWSFGILLTELTTKGR 210
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 103/212 (48%), Gaps = 21/212 (9%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
KLG G FG V+ G ++ ++AVK L + + F EA L+ +QH +V L
Sbjct: 19 KLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVT 77
Query: 117 HGAEKLLIYEYVINESL---------DKVLFSLIKDIQ------ILFRKKKT----DIKA 157
+I E++ SL KVL + D + + ++K D++A
Sbjct: 78 KEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRA 137
Query: 158 SNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFG 217
+N+L+ + + KIADFG+AR+ +++ + APE + G ++K++V+SFG
Sbjct: 138 ANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFG 197
Query: 218 VVILELIS-GQRNSSFNLDVDAQNLLDWAYKL 248
+++ E+++ G+ + D + L Y++
Sbjct: 198 ILLYEIVTYGKIPYPGRTNADVMSALSQGYRM 229
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 31/196 (15%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
+LG G G V+ G + ++AVK L S F EA L+ ++QH+ +V L Y
Sbjct: 20 RLGAGQAGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRL--YAV 76
Query: 117 HGAEKL-LIYEYVINESL--------------DKVL---------FSLIKDIQILFRKKK 152
E + +I EY+ N SL +K+L + I++ + R
Sbjct: 77 VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR--- 133
Query: 153 TDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKAD 212
D++A+NIL+ D KIADFG+ARL + + + APE + +G ++K+D
Sbjct: 134 -DLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 213 VFSFGVVILELISGQR 228
V+SFG+++ E+++ R
Sbjct: 193 VWSFGILLTEIVTHGR 208
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 96/196 (48%), Gaps = 31/196 (15%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
KLG+G FG V+ G + +A+K L + + F EA+++ +++H +V L Y
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQL--YAV 78
Query: 117 HGAEKL-LIYEYVINESLDKVL-----------------------FSLIKDIQILFRKKK 152
E + ++ EY+ SL L + ++ + + R
Sbjct: 79 VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHR--- 135
Query: 153 TDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKAD 212
D++A+NIL+ + + K+ADFG+ARL +++ + APE ++G ++K+D
Sbjct: 136 -DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 194
Query: 213 VFSFGVVILELISGQR 228
V+SFG+++ EL + R
Sbjct: 195 VWSFGILLTELTTKGR 210
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 95/196 (48%), Gaps = 31/196 (15%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
KLG+G FG V+ G + +A+K L + + F EA+++ +++H +V L Y
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQL--YAV 247
Query: 117 HGAEKLLIY-EYVINESLDKVL-----------------------FSLIKDIQILFRKKK 152
E + I EY+ SL L + ++ + + R
Sbjct: 248 VSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR--- 304
Query: 153 TDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKAD 212
D++A+NIL+ + + K+ADFG+ARL +++ + APE ++G ++K+D
Sbjct: 305 -DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 213 VFSFGVVILELISGQR 228
V+SFG+++ EL + R
Sbjct: 364 VWSFGILLTELTTKGR 379
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 126/273 (46%), Gaps = 46/273 (16%)
Query: 58 LGEGGFGPVFKGKLDD-GRE---IAVKKLSHS-SNQGKKEFENEAKLLARVQHRNVVNLL 112
+G G FG V +G+L G++ +A+K L + + ++EF +EA ++ + +H N++ L
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 113 GYCAHGAEKLLIYEYVINESLDKVL------FSLIKDIQIL------------FRKKKTD 154
G + +++ E++ N +LD L F++I+ + +L D
Sbjct: 84 GVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHRD 143
Query: 155 IKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNG-----YMAPEYVMHGHLSV 209
+ A NIL++ + K++DFG++R F E+ + T + G + APE + +
Sbjct: 144 LAARNILVNSNLVCKVSDFGLSR-FLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTS 202
Query: 210 KADVFSFGVVILELIS-GQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSG 268
+D +S+G+V+ E++S G+R + D N ++ Y+L
Sbjct: 203 ASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRL----------------PPPP 246
Query: 269 DQIAMCIQIGLLCTQGDPQLRPTMRRVVVMLSK 301
D Q+ L C Q D RP +VV L K
Sbjct: 247 DCPTSLHQLMLDCWQKDRNARPRFPQVVSALDK 279
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 94/196 (47%), Gaps = 31/196 (15%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
KLG+G FG V+ G + +A+K L + F EA+++ +++H +V L Y
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 117 HGAEKLLIYEYVINESLDK-VLFSLIK-DIQILFRKKKT--------------------- 153
E + Y++ E + K L +K ++ R +
Sbjct: 82 VSEEPI----YIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 154 -DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKAD 212
D++A+NIL+ + + K+ADFG+ARL +++ + APE ++G ++K+D
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 213 VFSFGVVILELISGQR 228
V+SFG+++ EL + R
Sbjct: 198 VWSFGILLTELTTKGR 213
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 27/200 (13%)
Query: 53 HPSNKLGEGGFGPVFKGKL--DDGREI--AVKKLSHSSNQGK-KEFENEAKLLARVQHRN 107
H + +G G FG V+ G L +DG++I AVK L+ ++ G+ +F E ++ H N
Sbjct: 92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 151
Query: 108 VVNLLGYCAHGAEKLLIY----------EYVINESLDKVLFSLI-------KDIQILFRK 150
V++LLG C L+ ++ NE+ + + LI K ++ L K
Sbjct: 152 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 211
Query: 151 K--KTDIKASNILLDDKWIPKIADFGMARLFPE---DQTHVNTRVAGTNGYMAPEYVMHG 205
K D+ A N +LD+K+ K+ADFG+AR + D H T +MA E +
Sbjct: 212 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 271
Query: 206 HLSVKADVFSFGVVILELIS 225
+ K+DV+SFGV++ EL++
Sbjct: 272 KFTTKSDVWSFGVLLWELMT 291
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 27/200 (13%)
Query: 53 HPSNKLGEGGFGPVFKGKL--DDGREI--AVKKLSHSSNQGK-KEFENEAKLLARVQHRN 107
H + +G G FG V+ G L +DG++I AVK L+ ++ G+ +F E ++ H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 108 VVNLLGYCAHGAEKLLIY----------EYVINESLDKVLFSLI-------KDIQILFRK 150
V++LLG C L+ ++ NE+ + + LI K ++ L K
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 152
Query: 151 K--KTDIKASNILLDDKWIPKIADFGMARLFPE---DQTHVNTRVAGTNGYMAPEYVMHG 205
K D+ A N +LD+K+ K+ADFG+AR + D H T +MA E +
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 212
Query: 206 HLSVKADVFSFGVVILELIS 225
+ K+DV+SFGV++ EL++
Sbjct: 213 KFTTKSDVWSFGVLLWELMT 232
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 27/200 (13%)
Query: 53 HPSNKLGEGGFGPVFKGKL--DDGREI--AVKKLSHSSNQGK-KEFENEAKLLARVQHRN 107
H + +G G FG V+ G L +DG++I AVK L+ ++ G+ +F E ++ H N
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 108 VVNLLGYCAHGAEKLLIY----------EYVINESLDKVLFSLI-------KDIQILFRK 150
V++LLG C L+ ++ NE+ + + LI K ++ L K
Sbjct: 94 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 153
Query: 151 K--KTDIKASNILLDDKWIPKIADFGMARLFPE---DQTHVNTRVAGTNGYMAPEYVMHG 205
K D+ A N +LD+K+ K+ADFG+AR + D H T +MA E +
Sbjct: 154 KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQ 213
Query: 206 HLSVKADVFSFGVVILELIS 225
+ K+DV+SFGV++ EL++
Sbjct: 214 KFTTKSDVWSFGVLLWELMT 233
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 27/200 (13%)
Query: 53 HPSNKLGEGGFGPVFKGKL--DDGREI--AVKKLSHSSNQGK-KEFENEAKLLARVQHRN 107
H + +G G FG V+ G L +DG++I AVK L+ ++ G+ +F E ++ H N
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 108 VVNLLGYCAHGAEKLLIY----------EYVINESLDKVLFSLI-------KDIQILFRK 150
V++LLG C L+ ++ NE+ + + LI K ++ L K
Sbjct: 91 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 150
Query: 151 K--KTDIKASNILLDDKWIPKIADFGMARLFPE---DQTHVNTRVAGTNGYMAPEYVMHG 205
K D+ A N +LD+K+ K+ADFG+AR + D H T +MA E +
Sbjct: 151 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 210
Query: 206 HLSVKADVFSFGVVILELIS 225
+ K+DV+SFGV++ EL++
Sbjct: 211 KFTTKSDVWSFGVLLWELMT 230
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 27/200 (13%)
Query: 53 HPSNKLGEGGFGPVFKGKL--DDGREI--AVKKLSHSSNQGK-KEFENEAKLLARVQHRN 107
H + +G G FG V+ G L +DG++I AVK L+ ++ G+ +F E ++ H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 108 VVNLLGYCAHGAEKLLIY----------EYVINESLDKVLFSLI-------KDIQILFRK 150
V++LLG C L+ ++ NE+ + + LI K ++ L K
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 152
Query: 151 K--KTDIKASNILLDDKWIPKIADFGMARLFPE---DQTHVNTRVAGTNGYMAPEYVMHG 205
K D+ A N +LD+K+ K+ADFG+AR + D H T +MA E +
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 212
Query: 206 HLSVKADVFSFGVVILELIS 225
+ K+DV+SFGV++ EL++
Sbjct: 213 KFTTKSDVWSFGVLLWELMT 232
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 27/200 (13%)
Query: 53 HPSNKLGEGGFGPVFKGKL--DDGREI--AVKKLSHSSNQGK-KEFENEAKLLARVQHRN 107
H + +G G FG V+ G L +DG++I AVK L+ ++ G+ +F E ++ H N
Sbjct: 38 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 97
Query: 108 VVNLLGYCAHGAEKLLIY----------EYVINESLDKVLFSLI-------KDIQILFRK 150
V++LLG C L+ ++ NE+ + + LI K ++ L K
Sbjct: 98 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 157
Query: 151 K--KTDIKASNILLDDKWIPKIADFGMARLFPE---DQTHVNTRVAGTNGYMAPEYVMHG 205
K D+ A N +LD+K+ K+ADFG+AR + D H T +MA E +
Sbjct: 158 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 217
Query: 206 HLSVKADVFSFGVVILELIS 225
+ K+DV+SFGV++ EL++
Sbjct: 218 KFTTKSDVWSFGVLLWELMT 237
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 27/200 (13%)
Query: 53 HPSNKLGEGGFGPVFKGKL--DDGREI--AVKKLSHSSNQGK-KEFENEAKLLARVQHRN 107
H + +G G FG V+ G L +DG++I AVK L+ ++ G+ +F E ++ H N
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 108 VVNLLGYCAHGAEKLLIY----------EYVINESLDKVLFSLI-------KDIQILFRK 150
V++LLG C L+ ++ NE+ + + LI K ++ L K
Sbjct: 94 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 153
Query: 151 K--KTDIKASNILLDDKWIPKIADFGMARLFPE---DQTHVNTRVAGTNGYMAPEYVMHG 205
K D+ A N +LD+K+ K+ADFG+AR + D H T +MA E +
Sbjct: 154 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 213
Query: 206 HLSVKADVFSFGVVILELIS 225
+ K+DV+SFGV++ EL++
Sbjct: 214 KFTTKSDVWSFGVLLWELMT 233
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 95/196 (48%), Gaps = 31/196 (15%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
KLG+G FG V+ G + +A+K L + + F EA+++ +++H +V L Y
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 117 HGAEKL-LIYEYVINESLDKVL-----------------------FSLIKDIQILFRKKK 152
E + ++ EY+ SL L + ++ + + R
Sbjct: 82 VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR--- 138
Query: 153 TDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKAD 212
D+ A+NIL+ + + K+ADFG+ARL +++ + APE ++G ++K+D
Sbjct: 139 -DLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 213 VFSFGVVILELISGQR 228
V+SFG+++ EL + R
Sbjct: 198 VWSFGILLTELTTKGR 213
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 94/196 (47%), Gaps = 31/196 (15%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
KLG+G FG V+ G + +A+K L + F EA+++ +++H +V L Y
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 117 HGAEKL-LIYEYVINESLDKVL-----------------------FSLIKDIQILFRKKK 152
E + ++ EY+ L L + ++ + + R
Sbjct: 82 VSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR--- 138
Query: 153 TDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKAD 212
D++A+NIL+ + + K+ADFG+ARL +++ + APE ++G ++K+D
Sbjct: 139 -DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 213 VFSFGVVILELISGQR 228
V+SFG+++ EL + R
Sbjct: 198 VWSFGILLTELTTKGR 213
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 126/273 (46%), Gaps = 46/273 (16%)
Query: 58 LGEGGFGPVFKGKLDD-GRE---IAVKKLSHS-SNQGKKEFENEAKLLARVQHRNVVNLL 112
+G G FG V +G+L G++ +A+K L + + ++EF +EA ++ + +H N++ L
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 113 GYCAHGAEKLLIYEYVINESLDKVL------FSLIKDIQIL------------FRKKKTD 154
G + +++ E++ N +LD L F++I+ + +L D
Sbjct: 82 GVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHRD 141
Query: 155 IKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNG-----YMAPEYVMHGHLSV 209
+ A NIL++ + K++DFG++R F E+ + T + G + APE + +
Sbjct: 142 LAARNILVNSNLVCKVSDFGLSR-FLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTS 200
Query: 210 KADVFSFGVVILELIS-GQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSG 268
+D +S+G+V+ E++S G+R + D N ++ Y+L
Sbjct: 201 ASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRL----------------PPPP 244
Query: 269 DQIAMCIQIGLLCTQGDPQLRPTMRRVVVMLSK 301
D Q+ L C Q D RP +VV L K
Sbjct: 245 DCPTSLHQLMLDCWQKDRNARPRFPQVVSALDK 277
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 105/221 (47%), Gaps = 27/221 (12%)
Query: 56 NKLGEGGFGPVFKGKLDD-GREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGY 114
+KLG G +G V++G +AVK L + + +EF EA ++ ++H N+V LLG
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 115 CAHGAEKLLIYEYVINESL-------------DKVLFSLIKDIQ--ILFRKKKT----DI 155
C +I E++ +L VL + I + + +KK D+
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 142
Query: 156 KASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFS 215
A N L+ + + K+ADFG++RL D + + APE + + S+K+DV++
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 202
Query: 216 FGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLE 256
FGV++ E+ + + +D+ Y+L +KD +E
Sbjct: 203 FGVLLWEIATYGMSPYPGIDLSQ------VYELLEKDYRME 237
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 103/221 (46%), Gaps = 27/221 (12%)
Query: 56 NKLGEGGFGPVFKGKLDD-GREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGY 114
+KLG G FG V++G +AVK L + + +EF EA ++ ++H N+V LLG
Sbjct: 17 HKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 115 CAHGAEKLLIYEYVI-------------NESLDKVLFSLIKDIQ--ILFRKKKT----DI 155
C +I E++ E VL + I + + +KK D+
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDL 135
Query: 156 KASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFS 215
A N L+ + + K+ADFG++RL D + + APE + + S+K+DV++
Sbjct: 136 AARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 195
Query: 216 FGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLE 256
FGV++ E+ + + +D Y+L +KD +E
Sbjct: 196 FGVLLWEIATYGMSPYPGIDPSQ------VYELLEKDYRME 230
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 104/200 (52%), Gaps = 27/200 (13%)
Query: 53 HPSNKLGEGGFGPVFKGKL--DDGREI--AVKKLSHSSNQGK-KEFENEAKLLARVQHRN 107
H + +G G FG V+ G L +DG++I AVK L+ ++ G+ +F E ++ H N
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 108 VVNLLGYCAHGAEKLLIY----------EYVINESLDKVLFSLI-------KDIQILFRK 150
V++LLG C L+ ++ NE+ + + LI K ++ L K
Sbjct: 92 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 151
Query: 151 K--KTDIKASNILLDDKWIPKIADFGMAR-LFPEDQTHVNTRVAGT--NGYMAPEYVMHG 205
K D+ A N +LD+K+ K+ADFG+AR ++ ++ V+ + +MA E +
Sbjct: 152 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQ 211
Query: 206 HLSVKADVFSFGVVILELIS 225
+ K+DV+SFGV++ EL++
Sbjct: 212 KFTTKSDVWSFGVLLWELMT 231
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 105/221 (47%), Gaps = 27/221 (12%)
Query: 56 NKLGEGGFGPVFKGKLDD-GREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGY 114
+KLG G +G V++G +AVK L + + +EF EA ++ ++H N+V LLG
Sbjct: 20 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 115 CAHGAEKLLIYEYVINESL-------------DKVLFSLIKDIQ--ILFRKKKT----DI 155
C +I E++ +L VL + I + + +KK D+
Sbjct: 79 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 138
Query: 156 KASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFS 215
A N L+ + + K+ADFG++RL D + + APE + + S+K+DV++
Sbjct: 139 AARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 198
Query: 216 FGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLE 256
FGV++ E+ + + +D L Y+L +KD +E
Sbjct: 199 FGVLLWEIATYGMSPYPGID------LSQVYELLEKDYRME 233
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 105/221 (47%), Gaps = 27/221 (12%)
Query: 56 NKLGEGGFGPVFKGKLDD-GREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGY 114
+KLG G +G V++G +AVK L + + +EF EA ++ ++H N+V LLG
Sbjct: 23 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 81
Query: 115 CAHGAEKLLIYEYVINESL-------------DKVLFSLIKDIQ--ILFRKKKT----DI 155
C +I E++ +L VL + I + + +KK D+
Sbjct: 82 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 141
Query: 156 KASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFS 215
A N L+ + + K+ADFG++RL D + + APE + + S+K+DV++
Sbjct: 142 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 201
Query: 216 FGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLE 256
FGV++ E+ + + +D+ Y+L +KD +E
Sbjct: 202 FGVLLWEIATYGMSPYPGIDLSQ------VYELLEKDYRME 236
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 105/221 (47%), Gaps = 27/221 (12%)
Query: 56 NKLGEGGFGPVFKGKLDD-GREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGY 114
+KLG G +G V++G +AVK L + + +EF EA ++ ++H N+V LLG
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 115 CAHGAEKLLIYEYVINESL-------------DKVLFSLIKDIQ--ILFRKKKT----DI 155
C +I E++ +L VL + I + + +KK D+
Sbjct: 83 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 142
Query: 156 KASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFS 215
A N L+ + + K+ADFG++RL D + + APE + + S+K+DV++
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 202
Query: 216 FGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLE 256
FGV++ E+ + + +D+ Y+L +KD +E
Sbjct: 203 FGVLLWEIATYGMSPYPGIDLSQ------VYELLEKDYRME 237
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 105/221 (47%), Gaps = 27/221 (12%)
Query: 56 NKLGEGGFGPVFKGKLDD-GREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGY 114
+KLG G +G V++G +AVK L + + +EF EA ++ ++H N+V LLG
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 115 CAHGAEKLLIYEYVINESL-------------DKVLFSLIKDIQ--ILFRKKKT----DI 155
C +I E++ +L VL + I + + +KK D+
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 142
Query: 156 KASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFS 215
A N L+ + + K+ADFG++RL D + + APE + + S+K+DV++
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 202
Query: 216 FGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLE 256
FGV++ E+ + + +D+ Y+L +KD +E
Sbjct: 203 FGVLLWEIATYGMSPYPGIDLSQ------VYELLEKDYRME 237
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 27/221 (12%)
Query: 56 NKLGEGGFGPVFKGKLDD-GREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGY 114
+KLG G +G V++G +AVK L + + +EF EA ++ ++H N+V LLG
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 115 CAHGAEKLLIYEYVI-------------NESLDKVLFSLIKDIQ--ILFRKKKT----DI 155
C +I E++ E VL + I + + +KK D+
Sbjct: 78 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDL 137
Query: 156 KASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFS 215
A N L+ + + K+ADFG++RL D + + APE + + S+K+DV++
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 197
Query: 216 FGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLE 256
FGV++ E+ + + +D L Y+L +KD +E
Sbjct: 198 FGVLLWEIATYGMSPYPGID------LSQVYELLEKDYRME 232
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 27/221 (12%)
Query: 56 NKLGEGGFGPVFKGKLDD-GREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGY 114
+KLG G +G V++G +AVK L + + +EF EA ++ ++H N+V LLG
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 115 CAHGAEKLLIYEYVI-------------NESLDKVLFSLIKDIQ--ILFRKKKT----DI 155
C +I E++ E VL + I + + +KK D+
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDL 142
Query: 156 KASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFS 215
A N L+ + + K+ADFG++RL D + + APE + + S+K+DV++
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 202
Query: 216 FGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLE 256
FGV++ E+ + + +D L Y+L +KD +E
Sbjct: 203 FGVLLWEIATYGMSPYPGID------LSQVYELLEKDYRME 237
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 27/221 (12%)
Query: 56 NKLGEGGFGPVFKGKLDD-GREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGY 114
+KLG G +G V++G +AVK L + + +EF EA ++ ++H N+V LLG
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 115 CAHGAEKLLIYEYVI-------------NESLDKVLFSLIKDIQ--ILFRKKKT----DI 155
C +I E++ E VL + I + + +KK D+
Sbjct: 78 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDL 137
Query: 156 KASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFS 215
A N L+ + + K+ADFG++RL D + + APE + + S+K+DV++
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 197
Query: 216 FGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLE 256
FGV++ E+ + + +D L Y+L +KD +E
Sbjct: 198 FGVLLWEIATYGMSPYPGID------LSQVYELLEKDYRME 232
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 125/298 (41%), Gaps = 58/298 (19%)
Query: 48 ATKNFHPSNKLGEGGFGPVF----KGKLDDGRE--IAVKKLSHSSNQGKK-EFENEAKLL 100
A + S +LG+G FG V+ KG + D E +A+K ++ +++ ++ EF NEA ++
Sbjct: 8 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 67
Query: 101 ARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFSL-------------------- 140
+VV LLG + G L+I E + L L SL
Sbjct: 68 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 127
Query: 141 ----IKDIQILFRKKK---TDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGT 193
I D K D+ A N ++ + + KI DFGM R D + G
Sbjct: 128 MAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIXETDXXRKGG 183
Query: 194 NG-----YMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKL 248
G +M+PE + G + +DV+SFGVV+ E+ + L + Y+
Sbjct: 184 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQG 228
Query: 249 YKKDKSLEIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVVVMLSKKPGPG 306
++ L V + M +++ +C Q +P++RP+ ++ + ++ PG
Sbjct: 229 LSNEQVLRFVMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 286
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 105/221 (47%), Gaps = 27/221 (12%)
Query: 56 NKLGEGGFGPVFKGKLDD-GREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGY 114
+KLG G +G V++G +AVK L + + +EF EA ++ ++H N+V LLG
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 115 CAHGAEKLLIYEYVINESL-------------DKVLFSLIKDIQ--ILFRKKKT----DI 155
C +I E++ +L VL + I + + +KK D+
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 142
Query: 156 KASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFS 215
A N L+ + + K+ADFG++RL D + + APE + + S+K+DV++
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 202
Query: 216 FGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLE 256
FGV++ E+ + + +D L Y+L +KD +E
Sbjct: 203 FGVLLWEIATYGMSPYPGID------LSQVYELLEKDYRME 237
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 27/221 (12%)
Query: 56 NKLGEGGFGPVFKGKLDD-GREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGY 114
+KLG G +G V++G +AVK L + + +EF EA ++ ++H N+V LLG
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 115 CAHGAEKLLIYEYVI-------------NESLDKVLFSLIKDIQ--ILFRKKKT----DI 155
C +I E++ E VL + I + + +KK D+
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDL 137
Query: 156 KASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFS 215
A N L+ + + K+ADFG++RL D + + APE + + S+K+DV++
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 197
Query: 216 FGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLE 256
FGV++ E+ + + +D L Y+L +KD +E
Sbjct: 198 FGVLLWEIATYGMSPYPGID------LSQVYELLEKDYRME 232
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 97/194 (50%), Gaps = 23/194 (11%)
Query: 56 NKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYC 115
++G G FG V+KGK + + ++ + Q + F+NE +L + +H N++ +GY
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 116 AHGAEKLLIYEYVINESLDKVL------FSLIKDIQILFRKKK------------TDIKA 157
+ ++ ++ SL L F +IK I I + + D+K+
Sbjct: 74 T-APQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKS 132
Query: 158 SNILLDDKWIPKIADFGMARLFPE-DQTHVNTRVAGTNGYMAPEYVM---HGHLSVKADV 213
+NI L + KI DFG+A + +H +++G+ +MAPE + S ++DV
Sbjct: 133 NNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDV 192
Query: 214 FSFGVVILELISGQ 227
++FG+V+ EL++GQ
Sbjct: 193 YAFGIVLYELMTGQ 206
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 104/200 (52%), Gaps = 27/200 (13%)
Query: 53 HPSNKLGEGGFGPVFKGKL--DDGREI--AVKKLSHSSNQGK-KEFENEAKLLARVQHRN 107
H + +G G FG V+ G L +DG++I AVK L+ ++ G+ +F E ++ H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 108 VVNLLGYCAHGAEKLLIY----------EYVINESLDKVLFSLI-------KDIQILFRK 150
V++LLG C L+ ++ NE+ + + LI K ++ L K
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 152
Query: 151 K--KTDIKASNILLDDKWIPKIADFGMAR-LFPEDQTHVNTRVAGT--NGYMAPEYVMHG 205
K D+ A N +LD+K+ K+ADFG+AR ++ ++ V+ + +MA E +
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 212
Query: 206 HLSVKADVFSFGVVILELIS 225
+ K+DV+SFGV++ EL++
Sbjct: 213 KFTTKSDVWSFGVLLWELMT 232
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 104/200 (52%), Gaps = 27/200 (13%)
Query: 53 HPSNKLGEGGFGPVFKGKL--DDGREI--AVKKLSHSSNQGK-KEFENEAKLLARVQHRN 107
H + +G G FG V+ G L +DG++I AVK L+ ++ G+ +F E ++ H N
Sbjct: 25 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 84
Query: 108 VVNLLGYCAHGAEKLLIY----------EYVINESLDKVLFSLI-------KDIQILFRK 150
V++LLG C L+ ++ NE+ + + LI K ++ L K
Sbjct: 85 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 144
Query: 151 K--KTDIKASNILLDDKWIPKIADFGMAR-LFPEDQTHVNTRVAGT--NGYMAPEYVMHG 205
K D+ A N +LD+K+ K+ADFG+AR ++ ++ V+ + +MA E +
Sbjct: 145 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 204
Query: 206 HLSVKADVFSFGVVILELIS 225
+ K+DV+SFGV++ EL++
Sbjct: 205 KFTTKSDVWSFGVLLWELMT 224
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 104/200 (52%), Gaps = 27/200 (13%)
Query: 53 HPSNKLGEGGFGPVFKGKL--DDGREI--AVKKLSHSSNQGK-KEFENEAKLLARVQHRN 107
H + +G G FG V+ G L +DG++I AVK L+ ++ G+ +F E ++ H N
Sbjct: 51 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 110
Query: 108 VVNLLGYCAHGAEKLLIY----------EYVINESLDKVLFSLI-------KDIQILFRK 150
V++LLG C L+ ++ NE+ + + LI K ++ L K
Sbjct: 111 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 170
Query: 151 K--KTDIKASNILLDDKWIPKIADFGMAR-LFPEDQTHVNTRVAGT--NGYMAPEYVMHG 205
K D+ A N +LD+K+ K+ADFG+AR ++ ++ V+ + +MA E +
Sbjct: 171 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 230
Query: 206 HLSVKADVFSFGVVILELIS 225
+ K+DV+SFGV++ EL++
Sbjct: 231 KFTTKSDVWSFGVLLWELMT 250
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 27/221 (12%)
Query: 56 NKLGEGGFGPVFKGKLDD-GREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGY 114
+KLG G +G V++G +AVK L + + +EF EA ++ ++H N+V LLG
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 115 CAHGAEKLLIYEYVI-------------NESLDKVLFSLIKDIQ--ILFRKKKT----DI 155
C +I E++ E VL + I + + +KK D+
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDL 137
Query: 156 KASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFS 215
A N L+ + + K+ADFG++RL D + + APE + + S+K+DV++
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 197
Query: 216 FGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLE 256
FGV++ E+ + + +D L Y+L +KD +E
Sbjct: 198 FGVLLWEIATYGMSPYPGID------LSQVYELLEKDYRME 232
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 104/200 (52%), Gaps = 27/200 (13%)
Query: 53 HPSNKLGEGGFGPVFKGKL--DDGREI--AVKKLSHSSNQGK-KEFENEAKLLARVQHRN 107
H + +G G FG V+ G L +DG++I AVK L+ ++ G+ +F E ++ H N
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 108 VVNLLGYCAHGAEKLLIY----------EYVINESLDKVLFSLI-------KDIQILFRK 150
V++LLG C L+ ++ NE+ + + LI K ++ L K
Sbjct: 92 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 151
Query: 151 K--KTDIKASNILLDDKWIPKIADFGMAR-LFPEDQTHVNTRVAGT--NGYMAPEYVMHG 205
K D+ A N +LD+K+ K+ADFG+AR ++ ++ V+ + +MA E +
Sbjct: 152 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 211
Query: 206 HLSVKADVFSFGVVILELIS 225
+ K+DV+SFGV++ EL++
Sbjct: 212 KFTTKSDVWSFGVLLWELMT 231
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 104/200 (52%), Gaps = 27/200 (13%)
Query: 53 HPSNKLGEGGFGPVFKGKL--DDGREI--AVKKLSHSSNQGK-KEFENEAKLLARVQHRN 107
H + +G G FG V+ G L +DG++I AVK L+ ++ G+ +F E ++ H N
Sbjct: 30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 89
Query: 108 VVNLLGYCAHGAEKLLIY----------EYVINESLDKVLFSLI-------KDIQILFRK 150
V++LLG C L+ ++ NE+ + + LI K ++ L K
Sbjct: 90 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 149
Query: 151 K--KTDIKASNILLDDKWIPKIADFGMAR-LFPEDQTHVNTRVAGT--NGYMAPEYVMHG 205
K D+ A N +LD+K+ K+ADFG+AR ++ ++ V+ + +MA E +
Sbjct: 150 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 209
Query: 206 HLSVKADVFSFGVVILELIS 225
+ K+DV+SFGV++ EL++
Sbjct: 210 KFTTKSDVWSFGVLLWELMT 229
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 104/200 (52%), Gaps = 27/200 (13%)
Query: 53 HPSNKLGEGGFGPVFKGKL--DDGREI--AVKKLSHSSNQGK-KEFENEAKLLARVQHRN 107
H + +G G FG V+ G L +DG++I AVK L+ ++ G+ +F E ++ H N
Sbjct: 52 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 111
Query: 108 VVNLLGYCAHGAEKLLIY----------EYVINESLDKVLFSLI-------KDIQILFRK 150
V++LLG C L+ ++ NE+ + + LI K ++ L K
Sbjct: 112 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 171
Query: 151 K--KTDIKASNILLDDKWIPKIADFGMAR-LFPEDQTHVNTRVAGT--NGYMAPEYVMHG 205
K D+ A N +LD+K+ K+ADFG+AR ++ ++ V+ + +MA E +
Sbjct: 172 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 231
Query: 206 HLSVKADVFSFGVVILELIS 225
+ K+DV+SFGV++ EL++
Sbjct: 232 KFTTKSDVWSFGVLLWELMT 251
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 105/221 (47%), Gaps = 27/221 (12%)
Query: 56 NKLGEGGFGPVFKGKLDD-GREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGY 114
+KLG G +G V++G +AVK L + + +EF EA ++ ++H N+V LLG
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 115 CAHGAEKLLIYEYVINESL-------------DKVLFSLIKDIQ--ILFRKKKT----DI 155
C +I E++ +L VL + I + + +KK D+
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 137
Query: 156 KASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFS 215
A N L+ + + K+ADFG++RL D + + APE + + S+K+DV++
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 197
Query: 216 FGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLE 256
FGV++ E+ + + +D+ Y+L +KD +E
Sbjct: 198 FGVLLWEIATYGMSPYPGIDLSQ------VYELLEKDYRME 232
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 104/200 (52%), Gaps = 27/200 (13%)
Query: 53 HPSNKLGEGGFGPVFKGKL--DDGREI--AVKKLSHSSNQGK-KEFENEAKLLARVQHRN 107
H + +G G FG V+ G L +DG++I AVK L+ ++ G+ +F E ++ H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 108 VVNLLGYCAHGAEKLLIY----------EYVINESLDKVLFSLI-------KDIQILFRK 150
V++LLG C L+ ++ NE+ + + LI K ++ L K
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 152
Query: 151 K--KTDIKASNILLDDKWIPKIADFGMAR-LFPEDQTHVNTRVAGT--NGYMAPEYVMHG 205
K D+ A N +LD+K+ K+ADFG+AR ++ ++ V+ + +MA E +
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 212
Query: 206 HLSVKADVFSFGVVILELIS 225
+ K+DV+SFGV++ EL++
Sbjct: 213 KFTTKSDVWSFGVLLWELMT 232
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 104/200 (52%), Gaps = 27/200 (13%)
Query: 53 HPSNKLGEGGFGPVFKGKL--DDGREI--AVKKLSHSSNQGK-KEFENEAKLLARVQHRN 107
H + +G G FG V+ G L +DG++I AVK L+ ++ G+ +F E ++ H N
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 108 VVNLLGYCAHGAEKLLIY----------EYVINESLDKVLFSLI-------KDIQILFRK 150
V++LLG C L+ ++ NE+ + + LI K ++ L K
Sbjct: 91 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 150
Query: 151 K--KTDIKASNILLDDKWIPKIADFGMAR-LFPEDQTHVNTRVAGT--NGYMAPEYVMHG 205
K D+ A N +LD+K+ K+ADFG+AR ++ ++ V+ + +MA E +
Sbjct: 151 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 210
Query: 206 HLSVKADVFSFGVVILELIS 225
+ K+DV+SFGV++ EL++
Sbjct: 211 KFTTKSDVWSFGVLLWELMT 230
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 105/221 (47%), Gaps = 27/221 (12%)
Query: 56 NKLGEGGFGPVFKGKLDD-GREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGY 114
+KLG G +G V++G +AVK L + + +EF EA ++ ++H N+V LLG
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 115 CAHGAEKLLIYEYVINESL-------------DKVLFSLIKDIQ--ILFRKKKT----DI 155
C +I E++ +L VL + I + + +KK D+
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 137
Query: 156 KASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFS 215
A N L+ + + K+ADFG++RL D + + APE + + S+K+DV++
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 197
Query: 216 FGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLE 256
FGV++ E+ + + +D+ Y+L +KD +E
Sbjct: 198 FGVLLWEIATYGMSPYPGIDLSQ------VYELLEKDYRME 232
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 104/200 (52%), Gaps = 27/200 (13%)
Query: 53 HPSNKLGEGGFGPVFKGKL--DDGREI--AVKKLSHSSNQGK-KEFENEAKLLARVQHRN 107
H + +G G FG V+ G L +DG++I AVK L+ ++ G+ +F E ++ H N
Sbjct: 28 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 87
Query: 108 VVNLLGYCAHGAEKLLIY----------EYVINESLDKVLFSLI-------KDIQILFRK 150
V++LLG C L+ ++ NE+ + + LI K ++ L K
Sbjct: 88 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 147
Query: 151 K--KTDIKASNILLDDKWIPKIADFGMAR-LFPEDQTHVNTRVAGT--NGYMAPEYVMHG 205
K D+ A N +LD+K+ K+ADFG+AR ++ ++ V+ + +MA E +
Sbjct: 148 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 207
Query: 206 HLSVKADVFSFGVVILELIS 225
+ K+DV+SFGV++ EL++
Sbjct: 208 KFTTKSDVWSFGVLLWELMT 227
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 105/221 (47%), Gaps = 27/221 (12%)
Query: 56 NKLGEGGFGPVFKGKLDD-GREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGY 114
+KLG G +G V++G +AVK L + + +EF EA ++ ++H N+V LLG
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 115 CAHGAEKLLIYEYVINESL-------------DKVLFSLIKDIQ--ILFRKKKT----DI 155
C +I E++ +L VL + I + + +KK D+
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 139
Query: 156 KASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFS 215
A N L+ + + K+ADFG++RL D + + APE + + S+K+DV++
Sbjct: 140 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 199
Query: 216 FGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLE 256
FGV++ E+ + + +D L Y+L +KD +E
Sbjct: 200 FGVLLWEIATYGMSPYPGID------LSQVYELLEKDYRME 234
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 119/280 (42%), Gaps = 56/280 (20%)
Query: 56 NKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYC 115
++G G FG V G + ++A+K + + +++F EA+++ ++ H +V L G C
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 116 AHGAEKLLIYEYVINESLDKVL----------------------FSLIKDIQILFRKKKT 153
A L++E++ + L L + +++ ++ R
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASVIHR---- 127
Query: 154 DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADV 213
D+ A N L+ + + K++DFGM R +DQ +T + +PE S K+DV
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 187
Query: 214 FSFGVVILELIS-------GQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASD 266
+SFGV++ E+ S + NS D+ ++LYK P LA++
Sbjct: 188 WSFGVLMWEVFSEGKIPYENRSNSEVVEDIST------GFRLYK---------PRLASTH 232
Query: 267 SGDQIAMCIQIGLLCTQGDPQLRPTMRRVVVMLSKKPGPG 306
QI C + P+ RP R++ L+ G
Sbjct: 233 -------VYQIMNHCWKERPEDRPAFSRLLRQLAAIAASG 265
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 105/221 (47%), Gaps = 27/221 (12%)
Query: 56 NKLGEGGFGPVFKGKLDD-GREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGY 114
+KLG G +G V++G +AVK L + + +EF EA ++ ++H N+V LLG
Sbjct: 32 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 90
Query: 115 CAHGAEKLLIYEYVINESL-------------DKVLFSLIKDIQ--ILFRKKKT----DI 155
C +I E++ +L VL + I + + +KK D+
Sbjct: 91 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 150
Query: 156 KASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFS 215
A N L+ + + K+ADFG++RL D + + APE + + S+K+DV++
Sbjct: 151 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 210
Query: 216 FGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLE 256
FGV++ E+ + + +D+ Y+L +KD +E
Sbjct: 211 FGVLLWEIATYGMSPYPGIDLSQ------VYELLEKDYRME 245
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 97/194 (50%), Gaps = 23/194 (11%)
Query: 56 NKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYC 115
++G G FG V+KGK + + ++ + Q + F+NE +L + +H N++ +GY
Sbjct: 41 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 116 AHGAEKLLIYEYVINESLDKVL------FSLIKDIQILFRKKK------------TDIKA 157
+ ++ ++ SL L F +IK I I + + D+K+
Sbjct: 101 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKS 159
Query: 158 SNILLDDKWIPKIADFGMARLFPE-DQTHVNTRVAGTNGYMAPEYVM---HGHLSVKADV 213
+NI L + KI DFG+A + +H +++G+ +MAPE + S ++DV
Sbjct: 160 NNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDV 219
Query: 214 FSFGVVILELISGQ 227
++FG+V+ EL++GQ
Sbjct: 220 YAFGIVLYELMTGQ 233
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 97/194 (50%), Gaps = 23/194 (11%)
Query: 56 NKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYC 115
++G G FG V+KGK + + ++ + Q + F+NE +L + +H N++ +GY
Sbjct: 42 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 116 AHGAEKLLIYEYVINESLDKVL------FSLIKDIQILFRKKK------------TDIKA 157
+ ++ ++ SL L F +IK I I + + D+K+
Sbjct: 102 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKS 160
Query: 158 SNILLDDKWIPKIADFGMARLFPE-DQTHVNTRVAGTNGYMAPEYVM---HGHLSVKADV 213
+NI L + KI DFG+A + +H +++G+ +MAPE + S ++DV
Sbjct: 161 NNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDV 220
Query: 214 FSFGVVILELISGQ 227
++FG+V+ EL++GQ
Sbjct: 221 YAFGIVLYELMTGQ 234
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 105/221 (47%), Gaps = 27/221 (12%)
Query: 56 NKLGEGGFGPVFKGKLDD-GREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGY 114
+KLG G +G V++G +AVK L + + +EF EA ++ ++H N+V LLG
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 115 CAHGAEKLLIYEYVINESL-------------DKVLFSLIKDIQ--ILFRKKKT----DI 155
C +I E++ +L VL + I + + +KK D+
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 139
Query: 156 KASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFS 215
A N L+ + + K+ADFG++RL D + + APE + + S+K+DV++
Sbjct: 140 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 199
Query: 216 FGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLE 256
FGV++ E+ + + +D L Y+L +KD +E
Sbjct: 200 FGVLLWEIATYGMSPYPGID------LSQVYELLEKDYRME 234
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 93/201 (46%), Gaps = 22/201 (10%)
Query: 58 LGEGGFGPVFKGK-LDDGREIAVKKLSHSSNQG--KKEFENEAKLLARVQHRNVVNLLGY 114
+GEG +G V K + D GR +A+KK S + KK E KLL +++H N+VNLL
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 115 CAHGAEKLLIYEYVINESLD---------------KVLFSLIKDIQILFRKK--KTDIKA 157
C L++E+V + LD K LF +I I DIK
Sbjct: 93 CKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKP 152
Query: 158 SNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKA-DVFSF 216
NIL+ + K+ DFG AR + VA T Y APE ++ KA DV++
Sbjct: 153 ENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVA-TRWYRAPELLVGDVKYGKAVDVWAI 211
Query: 217 GVVILELISGQRNSSFNLDVD 237
G ++ E+ G+ + D+D
Sbjct: 212 GCLVTEMFMGEPLFPGDSDID 232
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 97/194 (50%), Gaps = 23/194 (11%)
Query: 56 NKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYC 115
++G G FG V+KGK + + ++ + Q + F+NE +L + +H N++ +GY
Sbjct: 19 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 116 AHGAEKLLIYEYVINESLDKVL------FSLIKDIQILFRKKK------------TDIKA 157
+ ++ ++ SL L F +IK I I + + D+K+
Sbjct: 79 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKS 137
Query: 158 SNILLDDKWIPKIADFGMARLFPE-DQTHVNTRVAGTNGYMAPEYVM---HGHLSVKADV 213
+NI L + KI DFG+A + +H +++G+ +MAPE + S ++DV
Sbjct: 138 NNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDV 197
Query: 214 FSFGVVILELISGQ 227
++FG+V+ EL++GQ
Sbjct: 198 YAFGIVLYELMTGQ 211
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 124/298 (41%), Gaps = 58/298 (19%)
Query: 48 ATKNFHPSNKLGEGGFGPVF----KGKLDDGRE--IAVKKLSHSSNQGKK-EFENEAKLL 100
A + S +LG+G FG V+ KG + D E +A+K ++ +++ ++ EF NEA ++
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 101 ARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFSL-------------------- 140
+VV LLG + G L+I E + L L SL
Sbjct: 77 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 136
Query: 141 ----IKDIQILFRKKK---TDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGT 193
I D K D+ A N ++ + + KI DFGM R D + G
Sbjct: 137 MAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIXETDXXRKGG 192
Query: 194 NG-----YMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKL 248
G +M+PE + G + +DV+SFGVV+ E+ + L + Y+
Sbjct: 193 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQG 237
Query: 249 YKKDKSLEIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVVVMLSKKPGPG 306
++ L V + M ++ +C Q +P++RP+ ++ + ++ PG
Sbjct: 238 LSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 295
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 97/194 (50%), Gaps = 23/194 (11%)
Query: 56 NKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYC 115
++G G FG V+KGK + + ++ + Q + F+NE +L + +H N++ +GY
Sbjct: 16 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 116 AHGAEKLLIYEYVINESLDKVL------FSLIKDIQILFRKKK------------TDIKA 157
+ ++ ++ SL L F +IK I I + + D+K+
Sbjct: 76 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKS 134
Query: 158 SNILLDDKWIPKIADFGMARLFPE-DQTHVNTRVAGTNGYMAPEYVM---HGHLSVKADV 213
+NI L + KI DFG+A + +H +++G+ +MAPE + S ++DV
Sbjct: 135 NNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDV 194
Query: 214 FSFGVVILELISGQ 227
++FG+V+ EL++GQ
Sbjct: 195 YAFGIVLYELMTGQ 208
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 97/194 (50%), Gaps = 23/194 (11%)
Query: 56 NKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYC 115
++G G FG V+KGK + + ++ + Q + F+NE +L + +H N++ +GY
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 116 AHGAEKLLIYEYVINESLDKVL------FSLIKDIQILFRKKK------------TDIKA 157
+ ++ ++ SL L F +IK I I + + D+K+
Sbjct: 74 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKS 132
Query: 158 SNILLDDKWIPKIADFGMARLFPE-DQTHVNTRVAGTNGYMAPEYVM---HGHLSVKADV 213
+NI L + KI DFG+A + +H +++G+ +MAPE + S ++DV
Sbjct: 133 NNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDV 192
Query: 214 FSFGVVILELISGQ 227
++FG+V+ EL++GQ
Sbjct: 193 YAFGIVLYELMTGQ 206
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 97/194 (50%), Gaps = 23/194 (11%)
Query: 56 NKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYC 115
++G G FG V+KGK + + ++ + Q + F+NE +L + +H N++ +GY
Sbjct: 19 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 116 AHGAEKLLIYEYVINESLDKVL------FSLIKDIQILFRKKK------------TDIKA 157
+ ++ ++ SL L F +IK I I + + D+K+
Sbjct: 79 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKS 137
Query: 158 SNILLDDKWIPKIADFGMARLFPE-DQTHVNTRVAGTNGYMAPEYVM---HGHLSVKADV 213
+NI L + KI DFG+A + +H +++G+ +MAPE + S ++DV
Sbjct: 138 NNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDV 197
Query: 214 FSFGVVILELISGQ 227
++FG+V+ EL++GQ
Sbjct: 198 YAFGIVLYELMTGQ 211
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 27/221 (12%)
Query: 56 NKLGEGGFGPVFKGKLDD-GREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGY 114
+KLG G +G V++G +AVK L + + +EF EA ++ ++H N+V LLG
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 115 CAHGAEKLLIYEYVI-------------NESLDKVLFSLIKDIQ--ILFRKKKT----DI 155
C +I E++ E VL + I + + +KK D+
Sbjct: 76 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDL 135
Query: 156 KASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFS 215
A N L+ + + K+ADFG++RL D + + APE + + S+K+DV++
Sbjct: 136 AARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 195
Query: 216 FGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLE 256
FGV++ E+ + + +D Y+L +KD +E
Sbjct: 196 FGVLLWEIATYGMSPYPGIDPSQ------VYELLEKDYRME 230
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 124/294 (42%), Gaps = 50/294 (17%)
Query: 48 ATKNFHPSNKLGEGGFGPVF----KGKLDDGRE--IAVKKLSHSSNQGKK-EFENEAKLL 100
A + S +LG+G FG V+ KG + D E +A+K ++ +++ ++ EF NEA ++
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 101 ARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFSL-------------------- 140
+VV LLG + G L+I E + L L SL
Sbjct: 70 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 129
Query: 141 ----IKDIQILFRKKK---TDIKASNILLDDKWIPKIADFGMAR-LFPEDQTHVNTRVAG 192
I D K D+ A N ++ + + KI DFGM R ++ D +
Sbjct: 130 MAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 189
Query: 193 TNGYMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKD 252
+M+PE + G + +DV+SFGVV+ E+ + L + Y+ +
Sbjct: 190 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNE 234
Query: 253 KSLEIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVVVMLSKKPGPG 306
+ L V + M ++ +C Q +P++RP+ ++ + ++ PG
Sbjct: 235 QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 288
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 117/278 (42%), Gaps = 53/278 (19%)
Query: 58 LGEGGFGPVFKG------KLDDGREIAVKKLSHSSNQGK-KEFENEAKLLARV-QHRNVV 109
LG G FG V + K R +AVK L + + + +E K+L + H NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 110 NLLGYCAH-GAEKLLIYEYVINESLDKVL---------------------------FSLI 141
NLLG C G ++I E+ +L L F +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 142 KDIQILFRKKKT--DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN-GYMA 198
K ++ L +K D+ A NILL +K + KI DFG+AR +D +V A +MA
Sbjct: 155 KGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 214
Query: 199 PEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIV 258
PE + ++++DV+SFGV++ E+ S + + +D + K + ++ +
Sbjct: 215 PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR--RLKEGTRMRAPDYT 272
Query: 259 DPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
P + Q L C G+P RPT +V
Sbjct: 273 TPEM------------YQTMLDCWHGEPSQRPTFSELV 298
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 116/278 (41%), Gaps = 53/278 (19%)
Query: 58 LGEGGFGPVFKG------KLDDGREIAVKKLSHSSNQGK-KEFENEAKLLARV-QHRNVV 109
LG G FG V + K R +AVK L + + + +E K+L + H NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 110 NLLGYCAHGAEKLLIY----------------------------EYVINESLDKVLFSLI 141
NLLG C L++ +++ E L F +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 142 KDIQILFRKKKT--DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN-GYMA 198
K ++ L +K D+ A NILL +K + KI DFG+AR +D +V A +MA
Sbjct: 155 KGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMA 214
Query: 199 PEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIV 258
PE + ++++DV+SFGV++ E+ S + + +D + K + ++ +
Sbjct: 215 PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE--FXRRLKEGTRMRAPDYT 272
Query: 259 DPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
P + Q L C G+P RPT +V
Sbjct: 273 TPEM------------YQTMLDCWHGEPSQRPTFSELV 298
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 27/221 (12%)
Query: 56 NKLGEGGFGPVFKGKLDD-GREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGY 114
+KLG G +G V++G +AVK L + + +EF EA ++ ++H N+V LLG
Sbjct: 20 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 115 CAHGAEKLLIYEYVINESL-------------DKVLFSLIKDIQ--ILFRKKKT----DI 155
C +I E++ +L VL + I + + +KK D+
Sbjct: 79 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 138
Query: 156 KASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFS 215
A N L+ + + K+ADFG++RL D + APE + + S+K+DV++
Sbjct: 139 AARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWA 198
Query: 216 FGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLE 256
FGV++ E+ + + +D L Y+L +KD +E
Sbjct: 199 FGVLLWEIATYGMSPYPGID------LSQVYELLEKDYRME 233
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 122/287 (42%), Gaps = 50/287 (17%)
Query: 55 SNKLGEGGFGPVF----KGKLDDGRE--IAVKKLSHSSNQGKK-EFENEAKLLARVQHRN 107
S +LG+G FG V+ KG + D E +A+K ++ +++ ++ EF NEA ++ +
Sbjct: 30 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 89
Query: 108 VVNLLGYCAHGAEKLLIYEYVINESLDKVLFSL------------------------IKD 143
VV LLG + G L+I E + L L SL I D
Sbjct: 90 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 149
Query: 144 IQILFRKKK---TDIKASNILLDDKWIPKIADFGMAR-LFPEDQTHVNTRVAGTNGYMAP 199
K D+ A N ++ + + KI DFGM R ++ D + +M+P
Sbjct: 150 GMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 209
Query: 200 EYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVD 259
E + G + +DV+SFGVV+ E+ + L + Y+ ++ L V
Sbjct: 210 ESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVLRFVM 254
Query: 260 PSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVVVMLSKKPGPG 306
+ M ++ +C Q +P++RP+ ++ + ++ PG
Sbjct: 255 EGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 301
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 124/294 (42%), Gaps = 50/294 (17%)
Query: 48 ATKNFHPSNKLGEGGFGPVF----KGKLDDGRE--IAVKKLSHSSNQGKK-EFENEAKLL 100
A + S +LG+G FG V+ KG + D E +A+K ++ +++ ++ EF NEA ++
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 101 ARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFSL-------------------- 140
+VV LLG + G L+I E + L L SL
Sbjct: 77 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 136
Query: 141 ----IKDIQILFRKKK---TDIKASNILLDDKWIPKIADFGMAR-LFPEDQTHVNTRVAG 192
I D K D+ A N ++ + + KI DFGM R ++ D +
Sbjct: 137 MAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 196
Query: 193 TNGYMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKD 252
+M+PE + G + +DV+SFGVV+ E+ + L + Y+ +
Sbjct: 197 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNE 241
Query: 253 KSLEIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVVVMLSKKPGPG 306
+ L V + M ++ +C Q +P++RP+ ++ + ++ PG
Sbjct: 242 QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 295
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 27/221 (12%)
Query: 56 NKLGEGGFGPVFKGKLDD-GREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGY 114
+KLG G +G V++G +AVK L + + +EF EA ++ ++H N+V LLG
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 115 CAHGAEKLLIYEYVINESL-------------DKVLFSLIKDIQ--ILFRKKKT----DI 155
C +I E++ +L VL + I + + +KK D+
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 139
Query: 156 KASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFS 215
A N L+ + + K+ADFG++RL D + APE + + S+K+DV++
Sbjct: 140 AARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWA 199
Query: 216 FGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLE 256
FGV++ E+ + + +D L Y+L +KD +E
Sbjct: 200 FGVLLWEIATYGMSPYPGID------LSQVYELLEKDYRME 234
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 114/262 (43%), Gaps = 42/262 (16%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
+LG G FG V GK ++AVK + S + EF EA+ + ++ H +V G C+
Sbjct: 15 ELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCS 73
Query: 117 HGAEKLLIYEYVINESLDKVL----------------------FSLIKDIQILFRKKKTD 154
++ EY+ N L L + ++ Q + R D
Sbjct: 74 KEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHR----D 129
Query: 155 IKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVF 214
+ A N L+D K++DFGM R +DQ + + APE + S K+DV+
Sbjct: 130 LAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVW 189
Query: 215 SFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMC 274
+FG+++ E+ S + ++L +++ +L K + + P LA+ D I
Sbjct: 190 AFGILMWEVFSLGK-MPYDLYTNSEVVL-------KVSQGHRLYRPHLAS----DTI--- 234
Query: 275 IQIGLLCTQGDPQLRPTMRRVV 296
QI C P+ RPT ++++
Sbjct: 235 YQIMYSCWHELPEKRPTFQQLL 256
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 122/287 (42%), Gaps = 50/287 (17%)
Query: 55 SNKLGEGGFGPVF----KGKLDDGRE--IAVKKLSHSSNQGKK-EFENEAKLLARVQHRN 107
S +LG+G FG V+ KG + D E +A+K ++ +++ ++ EF NEA ++ +
Sbjct: 30 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 89
Query: 108 VVNLLGYCAHGAEKLLIYEYVINESLDKVLFSL------------------------IKD 143
VV LLG + G L+I E + L L SL I D
Sbjct: 90 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIAD 149
Query: 144 IQILFRKKK---TDIKASNILLDDKWIPKIADFGMAR-LFPEDQTHVNTRVAGTNGYMAP 199
K D+ A N ++ + + KI DFGM R ++ D + +M+P
Sbjct: 150 GMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 209
Query: 200 EYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVD 259
E + G + +DV+SFGVV+ E+ + L + Y+ ++ L V
Sbjct: 210 ESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVLRFVM 254
Query: 260 PSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVVVMLSKKPGPG 306
+ M ++ +C Q +P++RP+ ++ + ++ PG
Sbjct: 255 EGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 301
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 124/294 (42%), Gaps = 50/294 (17%)
Query: 48 ATKNFHPSNKLGEGGFGPVF----KGKLDDGRE--IAVKKLSHSSNQGKK-EFENEAKLL 100
A + S +LG+G FG V+ KG + D E +A+K ++ +++ ++ EF NEA ++
Sbjct: 14 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 73
Query: 101 ARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFSL-------------------- 140
+VV LLG + G L+I E + L L SL
Sbjct: 74 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 133
Query: 141 ----IKDIQILFRKKK---TDIKASNILLDDKWIPKIADFGMAR-LFPEDQTHVNTRVAG 192
I D K D+ A N ++ + + KI DFGM R ++ D +
Sbjct: 134 MAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 193
Query: 193 TNGYMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKD 252
+M+PE + G + +DV+SFGVV+ E+ + L + Y+ +
Sbjct: 194 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNE 238
Query: 253 KSLEIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVVVMLSKKPGPG 306
+ L V + M ++ +C Q +P++RP+ ++ + ++ PG
Sbjct: 239 QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 292
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 120/280 (42%), Gaps = 56/280 (20%)
Query: 56 NKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYC 115
++G G FG V G + ++A+K + + +++F EA+++ ++ H +V L G C
Sbjct: 16 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVC 74
Query: 116 AHGAEKLLIYEYVINESLDKVL----------------------FSLIKDIQILFRKKKT 153
A L++E++ + L L + +++ ++ R
Sbjct: 75 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHR---- 130
Query: 154 DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADV 213
D+ A N L+ + + K++DFGM R +DQ +T + +PE S K+DV
Sbjct: 131 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 190
Query: 214 FSFGVVILELIS-------GQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASD 266
+SFGV++ E+ S + NS D+ ++LYK P LA++
Sbjct: 191 WSFGVLMWEVFSEGKIPYENRSNSEVVEDIST------GFRLYK---------PRLASTH 235
Query: 267 SGDQIAMCIQIGLLCTQGDPQLRPTMRRVVVMLSKKPGPG 306
QI C + P+ RP R++ L++ G
Sbjct: 236 -------VYQIMNHCWRERPEDRPAFSRLLRQLAEIAESG 268
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 120/280 (42%), Gaps = 56/280 (20%)
Query: 56 NKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYC 115
++G G FG V G + ++A+K + + +++F EA+++ ++ H +V L G C
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 116 AHGAEKLLIYEYVINESLDKVL----------------------FSLIKDIQILFRKKKT 153
A L++E++ + L L + +++ ++ R
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHR---- 127
Query: 154 DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADV 213
D+ A N L+ + + K++DFGM R +DQ +T + +PE S K+DV
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 187
Query: 214 FSFGVVILELIS-------GQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASD 266
+SFGV++ E+ S + NS D+ ++LYK P LA++
Sbjct: 188 WSFGVLMWEVFSEGKIPYENRSNSEVVEDIST------GFRLYK---------PRLASTH 232
Query: 267 SGDQIAMCIQIGLLCTQGDPQLRPTMRRVVVMLSKKPGPG 306
QI C + P+ RP R++ L++ G
Sbjct: 233 V-------YQIMNHCWKERPEDRPAFSRLLRQLAEIAESG 265
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 120/280 (42%), Gaps = 56/280 (20%)
Query: 56 NKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYC 115
++G G FG V G + ++A+K + + +++F EA+++ ++ H +V L G C
Sbjct: 11 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVC 69
Query: 116 AHGAEKLLIYEYVINESLDKVL----------------------FSLIKDIQILFRKKKT 153
A L++E++ + L L + +++ ++ R
Sbjct: 70 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHR---- 125
Query: 154 DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADV 213
D+ A N L+ + + K++DFGM R +DQ +T + +PE S K+DV
Sbjct: 126 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 185
Query: 214 FSFGVVILELIS-------GQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASD 266
+SFGV++ E+ S + NS D+ ++LYK P LA++
Sbjct: 186 WSFGVLMWEVFSEGKIPYENRSNSEVVEDIST------GFRLYK---------PRLASTH 230
Query: 267 SGDQIAMCIQIGLLCTQGDPQLRPTMRRVVVMLSKKPGPG 306
QI C + P+ RP R++ L++ G
Sbjct: 231 V-------YQIMNHCWKERPEDRPAFSRLLRQLAEIAESG 263
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 119/280 (42%), Gaps = 56/280 (20%)
Query: 56 NKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYC 115
++G G FG V G + ++A+K + S + +F EA+++ ++ H +V L G C
Sbjct: 33 QEIGSGQFGLVHLGYWLNKDKVAIKTIKEGS-MSEDDFIEEAEVMMKLSHPKLVQLYGVC 91
Query: 116 AHGAEKLLIYEYVINESLDKVL----------------------FSLIKDIQILFRKKKT 153
A L++E++ + L L + +++ ++ R
Sbjct: 92 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHR---- 147
Query: 154 DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADV 213
D+ A N L+ + + K++DFGM R +DQ +T + +PE S K+DV
Sbjct: 148 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 207
Query: 214 FSFGVVILELIS-------GQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASD 266
+SFGV++ E+ S + NS D+ ++LYK P LA++
Sbjct: 208 WSFGVLMWEVFSEGKIPYENRSNSEVVEDIST------GFRLYK---------PRLASTH 252
Query: 267 SGDQIAMCIQIGLLCTQGDPQLRPTMRRVVVMLSKKPGPG 306
QI C + P+ RP R++ L++ G
Sbjct: 253 -------VYQIMNHCWKERPEDRPAFSRLLRQLAEIAESG 285
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 122/287 (42%), Gaps = 50/287 (17%)
Query: 55 SNKLGEGGFGPVF----KGKLDDGRE--IAVKKLSHSSNQGKK-EFENEAKLLARVQHRN 107
S +LG+G FG V+ KG + D E +A+K ++ +++ ++ EF NEA ++ +
Sbjct: 52 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 111
Query: 108 VVNLLGYCAHGAEKLLIYEYVINESLDKVLFSL------------------------IKD 143
VV LLG + G L+I E + L L SL I D
Sbjct: 112 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 171
Query: 144 IQILFRKKK---TDIKASNILLDDKWIPKIADFGMAR-LFPEDQTHVNTRVAGTNGYMAP 199
K D+ A N ++ + + KI DFGM R ++ D + +M+P
Sbjct: 172 GMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 231
Query: 200 EYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVD 259
E + G + +DV+SFGVV+ E+ + L + Y+ ++ L V
Sbjct: 232 ESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVLRFVM 276
Query: 260 PSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVVVMLSKKPGPG 306
+ M ++ +C Q +P++RP+ ++ + ++ PG
Sbjct: 277 EGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 323
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 124/294 (42%), Gaps = 50/294 (17%)
Query: 48 ATKNFHPSNKLGEGGFGPVF----KGKLDDGRE--IAVKKLSHSSNQGKK-EFENEAKLL 100
A + S +LG+G FG V+ KG + D E +A+K ++ +++ ++ EF NEA ++
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 75
Query: 101 ARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFSL-------------------- 140
+VV LLG + G L+I E + L L SL
Sbjct: 76 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 135
Query: 141 ----IKDIQILFRKKK---TDIKASNILLDDKWIPKIADFGMAR-LFPEDQTHVNTRVAG 192
I D K D+ A N ++ + + KI DFGM R ++ D +
Sbjct: 136 MAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 195
Query: 193 TNGYMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKD 252
+M+PE + G + +DV+SFGVV+ E+ + L + Y+ +
Sbjct: 196 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNE 240
Query: 253 KSLEIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVVVMLSKKPGPG 306
+ L V + M ++ +C Q +P++RP+ ++ + ++ PG
Sbjct: 241 QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 294
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 27/221 (12%)
Query: 56 NKLGEGGFGPVFKGKLDD-GREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGY 114
+KLG G +G V++G +AVK L + + +EF EA ++ ++H N+V LLG
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 115 CAHGAEKLLIYEYVI-------------NESLDKVLFSLIKDIQ--ILFRKKKT----DI 155
C +I E++ E VL + I + + +KK D+
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDL 135
Query: 156 KASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFS 215
A N L+ + + K+ADFG++RL D + + APE + + S+K+DV++
Sbjct: 136 AARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 195
Query: 216 FGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLE 256
FGV++ E+ + + +D Y+L +KD +E
Sbjct: 196 FGVLLWEIATYGMSPYPGIDPSQ------VYELLEKDYRME 230
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 124/294 (42%), Gaps = 50/294 (17%)
Query: 48 ATKNFHPSNKLGEGGFGPVF----KGKLDDGRE--IAVKKLSHSSNQGKK-EFENEAKLL 100
A + S +LG+G FG V+ KG + D E +A+K ++ +++ ++ EF NEA ++
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 75
Query: 101 ARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFSL-------------------- 140
+VV LLG + G L+I E + L L SL
Sbjct: 76 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 135
Query: 141 ----IKDIQILFRKKK---TDIKASNILLDDKWIPKIADFGMAR-LFPEDQTHVNTRVAG 192
I D K D+ A N ++ + + KI DFGM R ++ D +
Sbjct: 136 MAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 195
Query: 193 TNGYMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKD 252
+M+PE + G + +DV+SFGVV+ E+ + L + Y+ +
Sbjct: 196 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNE 240
Query: 253 KSLEIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVVVMLSKKPGPG 306
+ L V + M ++ +C Q +P++RP+ ++ + ++ PG
Sbjct: 241 QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 294
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 116/260 (44%), Gaps = 36/260 (13%)
Query: 56 NKLGEGGFGPVFKGKLDD-GREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGY 114
+KLG G +G V++G +AVK L + + +EF EA ++ ++H N+V LLG
Sbjct: 265 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 323
Query: 115 CAHGAEKLLIYEYVINESL-------------DKVLFSLIKDIQ--ILFRKKKT----DI 155
C +I E++ +L VL + I + + +KK ++
Sbjct: 324 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNL 383
Query: 156 KASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFS 215
A N L+ + + K+ADFG++RL D + + APE + + S+K+DV++
Sbjct: 384 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 443
Query: 216 FGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCI 275
FGV++ E+ + + +D L Y+L +KD +E P
Sbjct: 444 FGVLLWEIATYGMSPYPGID------LSQVYELLEKDYRME--RPEGCPEK-------VY 488
Query: 276 QIGLLCTQGDPQLRPTMRRV 295
++ C Q +P RP+ +
Sbjct: 489 ELMRACWQWNPSDRPSFAEI 508
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 98/197 (49%), Gaps = 27/197 (13%)
Query: 56 NKLGEGGFGPVFKGKLD-----DGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVN 110
++LG+G FG V + D G +AVK+L HS +++F+ E ++L + +V
Sbjct: 13 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 72
Query: 111 LLG--YCAHGAEKLLIYEYVINESLDK--------------VLFS--LIKDIQILFRKKK 152
G Y E L+ EY+ + L +L+S + K ++ L ++
Sbjct: 73 YRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRC 132
Query: 153 T--DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNG--YMAPEYVMHGHLS 208
D+ A NIL++ + KIADFG+A+L P D+ R G + + APE + S
Sbjct: 133 VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFS 192
Query: 209 VKADVFSFGVVILELIS 225
++DV+SFGVV+ EL +
Sbjct: 193 RQSDVWSFGVVLYELFT 209
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 104/221 (47%), Gaps = 27/221 (12%)
Query: 56 NKLGEGGFGPVFKGKLDD-GREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGY 114
+KLG G +G V++G +AVK L + + +EF EA ++ ++H N+V LLG
Sbjct: 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 284
Query: 115 CAHGAEKLLIYEYVI-------------NESLDKVLFSLIKDIQ--ILFRKKKT----DI 155
C +I E++ E VL + I + + +KK ++
Sbjct: 285 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNL 344
Query: 156 KASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFS 215
A N L+ + + K+ADFG++RL D + + APE + + S+K+DV++
Sbjct: 345 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 404
Query: 216 FGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLE 256
FGV++ E+ + + +D L Y+L +KD +E
Sbjct: 405 FGVLLWEIATYGMSPYPGID------LSQVYELLEKDYRME 439
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 122/287 (42%), Gaps = 50/287 (17%)
Query: 55 SNKLGEGGFGPVF----KGKLDDGRE--IAVKKLSHSSNQGKK-EFENEAKLLARVQHRN 107
S +LG+G FG V+ KG + D E +A+K ++ +++ ++ EF NEA ++ +
Sbjct: 20 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 79
Query: 108 VVNLLGYCAHGAEKLLIYEYVINESLDKVLFSL------------------------IKD 143
VV LLG + G L+I E + L L SL I D
Sbjct: 80 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIAD 139
Query: 144 IQILFRKKK---TDIKASNILLDDKWIPKIADFGMAR-LFPEDQTHVNTRVAGTNGYMAP 199
K D+ A N ++ + + KI DFGM R ++ D + +M+P
Sbjct: 140 GMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 199
Query: 200 EYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVD 259
E + G + +DV+SFGVV+ E+ + L + Y+ ++ L V
Sbjct: 200 ESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVLRFVM 244
Query: 260 PSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVVVMLSKKPGPG 306
+ M ++ +C Q +P++RP+ ++ + ++ PG
Sbjct: 245 EGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 291
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 116/260 (44%), Gaps = 36/260 (13%)
Query: 56 NKLGEGGFGPVFKGKLDD-GREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGY 114
+KLG G +G V++G +AVK L + + +EF EA ++ ++H N+V LLG
Sbjct: 223 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 281
Query: 115 CAHGAEKLLIYEYVINESL-------------DKVLFSLIKDIQ--ILFRKKKT----DI 155
C +I E++ +L VL + I + + +KK ++
Sbjct: 282 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNL 341
Query: 156 KASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFS 215
A N L+ + + K+ADFG++RL D + + APE + + S+K+DV++
Sbjct: 342 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 401
Query: 216 FGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCI 275
FGV++ E+ + + +D L Y+L +KD +E P
Sbjct: 402 FGVLLWEIATYGMSPYPGID------LSQVYELLEKDYRME--RPEGCPEK-------VY 446
Query: 276 QIGLLCTQGDPQLRPTMRRV 295
++ C Q +P RP+ +
Sbjct: 447 ELMRACWQWNPSDRPSFAEI 466
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 120/288 (41%), Gaps = 70/288 (24%)
Query: 57 KLGEGGFGPVFKGKLDD------GREIAVKKLSHSSN-QGKKEFENEAKLLARVQHRNVV 109
+LG+G FG V++G D +AVK ++ S++ + + EF NEA ++ +VV
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 110 NLLGYCAHGAEKLLIYEYVINESLDKVLFSL------------------------IKDIQ 145
LLG + G L++ E + + L L SL I D
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 146 ILFRKKK---TDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNG-----YM 197
KK D+ A N ++ + KI DFGM R D + G G +M
Sbjct: 144 AYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIXETDXXRKGGKGLLPVRWM 199
Query: 198 APEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEI 257
APE + G + +D++SFGVV+ E+ S L + Y+ ++ L+
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVLKF 244
Query: 258 VDPSLAASDSG--DQIAMC----IQIGLLCTQGDPQLRPTMRRVVVML 299
V D G DQ C + +C Q +P++RPT +V +L
Sbjct: 245 V------MDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 100/197 (50%), Gaps = 27/197 (13%)
Query: 56 NKLGEGGFGPVFKGKLD-----DGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVN 110
++LG+G FG V + D G +AVK+L HS +++F+ E ++L + +V
Sbjct: 17 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 76
Query: 111 LLGYC-AHGAEKL-LIYEYVINESLDK--------------VLFS--LIKDIQILFRKKK 152
G G + L L+ EY+ + L +L+S + K ++ L ++
Sbjct: 77 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRC 136
Query: 153 T--DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNG--YMAPEYVMHGHLS 208
D+ A NIL++ + KIADFG+A+L P D+ + R G + + APE + S
Sbjct: 137 VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFS 196
Query: 209 VKADVFSFGVVILELIS 225
++DV+SFGVV+ EL +
Sbjct: 197 RQSDVWSFGVVLYELFT 213
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 124/294 (42%), Gaps = 50/294 (17%)
Query: 48 ATKNFHPSNKLGEGGFGPVF----KGKLDDGRE--IAVKKLSHSSNQGKK-EFENEAKLL 100
A + S +LG+G FG V+ KG + D E +A+K ++ +++ ++ EF NEA ++
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 101 ARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFSL-------------------- 140
+VV LLG + G L+I E + L L SL
Sbjct: 70 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 129
Query: 141 ----IKDIQILFRKKK---TDIKASNILLDDKWIPKIADFGMAR-LFPEDQTHVNTRVAG 192
I D K D+ A N + + + KI DFGM R ++ D +
Sbjct: 130 MAGEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 189
Query: 193 TNGYMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKD 252
+M+PE + G + +DV+SFGVV+ E+ + L + Y+ +
Sbjct: 190 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNE 234
Query: 253 KSLEIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVVVMLSKKPGPG 306
+ L V + M +++ +C Q +P++RP+ ++ + ++ PG
Sbjct: 235 QVLRFVMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 288
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 100/197 (50%), Gaps = 27/197 (13%)
Query: 56 NKLGEGGFGPVFKGKLD-----DGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVN 110
++LG+G FG V + D G +AVK+L HS +++F+ E ++L + +V
Sbjct: 16 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 75
Query: 111 LLGYC-AHGAEKL-LIYEYVINESLDK--------------VLFS--LIKDIQILFRKKK 152
G G + L L+ EY+ + L +L+S + K ++ L ++
Sbjct: 76 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRC 135
Query: 153 T--DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNG--YMAPEYVMHGHLS 208
D+ A NIL++ + KIADFG+A+L P D+ + R G + + APE + S
Sbjct: 136 VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFS 195
Query: 209 VKADVFSFGVVILELIS 225
++DV+SFGVV+ EL +
Sbjct: 196 RQSDVWSFGVVLYELFT 212
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 120/288 (41%), Gaps = 70/288 (24%)
Query: 57 KLGEGGFGPVFKGKLDD------GREIAVKKLSHSSN-QGKKEFENEAKLLARVQHRNVV 109
+LG+G FG V++G D +AVK ++ S++ + + EF NEA ++ +VV
Sbjct: 21 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 80
Query: 110 NLLGYCAHGAEKLLIYEYVINESLDKVLFSL------------------------IKDIQ 145
LLG + G L++ E + + L L SL I D
Sbjct: 81 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 140
Query: 146 ILFRKKK---TDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNG-----YM 197
KK D+ A N ++ + KI DFGM R D + G G +M
Sbjct: 141 AYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIXETDXXRKGGKGLLPVRWM 196
Query: 198 APEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEI 257
APE + G + +D++SFGVV+ E+ S L + Y+ ++ L+
Sbjct: 197 APESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVLKF 241
Query: 258 VDPSLAASDSG--DQIAMC----IQIGLLCTQGDPQLRPTMRRVVVML 299
V D G DQ C + +C Q +P++RPT +V +L
Sbjct: 242 V------MDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 283
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 100/197 (50%), Gaps = 27/197 (13%)
Query: 56 NKLGEGGFGPVFKGKLD-----DGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVN 110
++LG+G FG V + D G +AVK+L HS +++F+ E ++L + +V
Sbjct: 29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 88
Query: 111 LLGYC-AHGAEKL-LIYEYVINESLDK--------------VLFS--LIKDIQILFRKKK 152
G G + L L+ EY+ + L +L+S + K ++ L ++
Sbjct: 89 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRC 148
Query: 153 T--DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNG--YMAPEYVMHGHLS 208
D+ A NIL++ + KIADFG+A+L P D+ + R G + + APE + S
Sbjct: 149 VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFS 208
Query: 209 VKADVFSFGVVILELIS 225
++DV+SFGVV+ EL +
Sbjct: 209 RQSDVWSFGVVLYELFT 225
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 96/194 (49%), Gaps = 23/194 (11%)
Query: 56 NKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYC 115
++G G FG V+KGK + + ++ + Q + F+NE +L + +H N++ +GY
Sbjct: 42 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 116 AHGAEKLLIYEYVINESLDKVL------FSLIKDIQILFRKKK------------TDIKA 157
+ ++ ++ SL L F +IK I I + + D+K+
Sbjct: 102 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKS 160
Query: 158 SNILLDDKWIPKIADFGMARLFPE-DQTHVNTRVAGTNGYMAPEYVM---HGHLSVKADV 213
+NI L + KI DFG+A +H +++G+ +MAPE + S ++DV
Sbjct: 161 NNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDV 220
Query: 214 FSFGVVILELISGQ 227
++FG+V+ EL++GQ
Sbjct: 221 YAFGIVLYELMTGQ 234
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 115/280 (41%), Gaps = 55/280 (19%)
Query: 58 LGEGGFGPVFKG------KLDDGREIAVKKLSHSSNQGK-KEFENEAKLLARV-QHRNVV 109
LG G FG V + K R +AVK L + + + +E K+L + H NVV
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 110 NLLGYCAHGAEKLLIY------------------------------EYVINESLDKVLFS 139
NLLG C L++ +++ E L F
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 140 LIKDIQILFRKKKT--DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN-GY 196
+ K ++ L +K D+ A NILL +K + KI DFG+AR +D V A +
Sbjct: 157 VAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKW 216
Query: 197 MAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLE 256
MAPE + ++++DV+SFGV++ E+ S + + +D + K + ++ +
Sbjct: 217 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR--RLKEGTRMRAPD 274
Query: 257 IVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
P + Q L C G+P RPT +V
Sbjct: 275 YTTPEM------------YQTMLDCWHGEPSQRPTFSELV 302
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 22/214 (10%)
Query: 56 NKLGEGGFGPVFKGKLDD-GREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGY 114
+KLG G +G V+ G +AVK L + + +EF EA ++ ++H N+V LLG
Sbjct: 38 HKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 96
Query: 115 CAHGAEKLLIYEYVI-------------NESLDKVLFSLIKDIQ--ILFRKKKT----DI 155
C ++ EY+ E VL + I + + +KK D+
Sbjct: 97 CTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRDL 156
Query: 156 KASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFS 215
A N L+ + + K+ADFG++RL D + + APE + + S+K+DV++
Sbjct: 157 AARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWA 216
Query: 216 FGVVILELISGQRNSSFNLDVD-AQNLLDWAYKL 248
FGV++ E+ + + +D+ +LL+ Y++
Sbjct: 217 FGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRM 250
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 119/263 (45%), Gaps = 35/263 (13%)
Query: 52 FHPSNKLGEGGFGPVFKGKLDDGREIAVKKLS--HSSNQGKKEFENEAKLLARVQHRNVV 109
F ++G+G FG VFKG + +++ K+ + ++ + E +L++ V
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 110 NLLGYCAHGAEKLLIYEYVINES--------------LDKVLFSLIKDIQILFRKKKT-- 153
G G++ +I EY+ S + +L ++K + L +KK
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHR 144
Query: 154 DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADV 213
DIKA+N+LL ++ K+ADFG+A + Q NT V GT +MAPE + KAD+
Sbjct: 145 DIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIQQSAYDSKADI 203
Query: 214 FSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAM 273
+S G+ +EL G+ +S D+ +L + + K + P+L GD
Sbjct: 204 WSLGITAIELAKGEPPNS---DMHPMRVL---FLIPKNNP------PTLV----GDFTKS 247
Query: 274 CIQIGLLCTQGDPQLRPTMRRVV 296
+ C DP RPT + ++
Sbjct: 248 FKEFIDACLNKDPSFRPTAKELL 270
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 49/214 (22%)
Query: 57 KLGEGGFGPVFKGKL------DDGREIAVKKLSHSSNQG-KKEFENEAKLLARVQHRNVV 109
+LGE FG V+KG L + + +A+K L + ++EF +EA L AR+QH NVV
Sbjct: 33 ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVV 92
Query: 110 NLLG-------------YCAHGAEKLLIYEYVINESL---------DKVLFSLIKDIQIL 147
LLG YC+HG ++E+++ S D+ + S ++ +
Sbjct: 93 CLLGVVTKDQPLSMIFSYCSHGD----LHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 148
Query: 148 FRKKKT---------------DIKASNILLDDKWIPKIADFGMAR-LFPEDQTHVNTRVA 191
+ D+ N+L+ DK KI+D G+ R ++ D +
Sbjct: 149 HLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSL 208
Query: 192 GTNGYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
+MAPE +M+G S+ +D++S+GVV+ E+ S
Sbjct: 209 LPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 96/194 (49%), Gaps = 23/194 (11%)
Query: 56 NKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYC 115
++G G FG V+KGK + + ++ + Q + F+NE +L + +H N++ +GY
Sbjct: 34 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 116 AHGAEKLLIYEYVINESLDKVL------FSLIKDIQILFRKKK------------TDIKA 157
+ ++ ++ SL L F +IK I I + + D+K+
Sbjct: 94 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKS 152
Query: 158 SNILLDDKWIPKIADFGMARLFPE-DQTHVNTRVAGTNGYMAPEYVM---HGHLSVKADV 213
+NI L + KI DFG+A +H +++G+ +MAPE + S ++DV
Sbjct: 153 NNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDV 212
Query: 214 FSFGVVILELISGQ 227
++FG+V+ EL++GQ
Sbjct: 213 YAFGIVLYELMTGQ 226
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 119/288 (41%), Gaps = 70/288 (24%)
Query: 57 KLGEGGFGPVFKGKLDD------GREIAVKKLSHSSN-QGKKEFENEAKLLARVQHRNVV 109
+LG+G FG V++G D +AVK ++ S++ + + EF NEA ++ +VV
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 110 NLLGYCAHGAEKLLIYEYVINESLDKVLFSL------------------------IKDIQ 145
LLG + G L++ E + + L L SL I D
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 146 ILFRKKK---TDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNG-----YM 197
KK D+ A N ++ + KI DFGM R D + G G +M
Sbjct: 144 AYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIXETDXXRKGGKGLLPVRWM 199
Query: 198 APEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEI 257
APE + G + +D++SFGVV+ E+ S L + Y+ ++ L+
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVLKF 244
Query: 258 VDPSLAASDSG--DQIAMC----IQIGLLCTQGDPQLRPTMRRVVVML 299
V D G DQ C + +C Q +P +RPT +V +L
Sbjct: 245 V------MDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 286
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 117/282 (41%), Gaps = 57/282 (20%)
Query: 58 LGEGGFGPVFKG------KLDDGREIAVKKLSHSSNQGK-KEFENEAKLLARV-QHRNVV 109
LG G FG V + K R +AVK L + + + +E K+L + H NVV
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 110 NLLGYCAH-GAEKLLIYEYVINESLDKVL------------------------------- 137
NLLG C G ++I E+ +L L
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 138 FSLIKDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN- 194
F + K ++ L +K D+ A NILL +K + KI DFG+AR +D +V A
Sbjct: 157 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 216
Query: 195 GYMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKS 254
+MAPE + ++++DV+SFGV++ E+ S + + +D + K + ++
Sbjct: 217 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR--RLKEGTRMRA 274
Query: 255 LEIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
+ P + Q L C G+P RPT +V
Sbjct: 275 PDYTTPEM------------YQTMLDCWHGEPSQRPTFSELV 304
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 120/284 (42%), Gaps = 62/284 (21%)
Query: 57 KLGEGGFGPVFKGKLDD------GREIAVKKLSHSSNQGKK-EFENEAKLLARVQHRNVV 109
+LG+G FG V++G D +AVK ++ S++ ++ EF NEA ++ +VV
Sbjct: 23 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 82
Query: 110 NLLGYCAHGAEKLLIYEYVINESLDKVLFSL------------------------IKDIQ 145
LLG + G L++ E + + L L SL I D
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 146 ILFRKKK---TDIKASNILLDDKWIPKIADFGMAR-LFPEDQTHVNTRVAGTNGYMAPEY 201
KK D+ A N ++ + KI DFGM R ++ D + +MAPE
Sbjct: 143 AYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPES 202
Query: 202 VMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPS 261
+ G + +D++SFGVV+ E+ S L + Y+ ++ L+ V
Sbjct: 203 LKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVLKFV--- 244
Query: 262 LAASDSG--DQIAMC----IQIGLLCTQGDPQLRPTMRRVVVML 299
D G DQ C + +C Q +P++RPT +V +L
Sbjct: 245 ---MDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 285
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 96/194 (49%), Gaps = 23/194 (11%)
Query: 56 NKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYC 115
++G G FG V+KGK + + ++ + Q + F+NE +L + +H N++ +GY
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 116 AHGAEKLLIYEYVINESLDKVL------FSLIKDIQILFRKKK------------TDIKA 157
+ ++ ++ SL L F +IK I I + + D+K+
Sbjct: 74 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKS 132
Query: 158 SNILLDDKWIPKIADFGMARLFPE-DQTHVNTRVAGTNGYMAPEYVM---HGHLSVKADV 213
+NI L + KI DFG+A +H +++G+ +MAPE + S ++DV
Sbjct: 133 NNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDV 192
Query: 214 FSFGVVILELISGQ 227
++FG+V+ EL++GQ
Sbjct: 193 YAFGIVLYELMTGQ 206
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 49/214 (22%)
Query: 57 KLGEGGFGPVFKGKL------DDGREIAVKKL-SHSSNQGKKEFENEAKLLARVQHRNVV 109
+LGE FG V+KG L + + +A+K L + ++EF +EA L AR+QH NVV
Sbjct: 16 ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVV 75
Query: 110 NLLG-------------YCAHGAEKLLIYEYVINESL---------DKVLFSLIKDIQIL 147
LLG YC+HG ++E+++ S D+ + S ++ +
Sbjct: 76 CLLGVVTKDQPLSMIFSYCSHGD----LHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 131
Query: 148 FRKKKT---------------DIKASNILLDDKWIPKIADFGMAR-LFPEDQTHVNTRVA 191
+ D+ N+L+ DK KI+D G+ R ++ D +
Sbjct: 132 HLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSL 191
Query: 192 GTNGYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
+MAPE +M+G S+ +D++S+GVV+ E+ S
Sbjct: 192 LPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 117/282 (41%), Gaps = 57/282 (20%)
Query: 58 LGEGGFGPVFKG------KLDDGREIAVKKLSHSSNQGK-KEFENEAKLLARV-QHRNVV 109
LG G FG V + K R +AVK L + + + +E K+L + H NVV
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 110 NLLGYCAH-GAEKLLIYEYVINESLDKVL------------------------------- 137
NLLG C G ++I E+ +L L
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 138 FSLIKDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN- 194
F + K ++ L +K D+ A NILL +K + KI DFG+AR +D +V A
Sbjct: 192 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 251
Query: 195 GYMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKS 254
+MAPE + ++++DV+SFGV++ E+ S + + +D + K + ++
Sbjct: 252 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE--FCRRLKEGTRMRA 309
Query: 255 LEIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
+ P + Q L C G+P RPT +V
Sbjct: 310 PDYTTPEM------------YQTMLDCWHGEPSQRPTFSELV 339
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 120/284 (42%), Gaps = 62/284 (21%)
Query: 57 KLGEGGFGPVFKGKLDD------GREIAVKKLSHSSN-QGKKEFENEAKLLARVQHRNVV 109
+LG+G FG V++G D +AVK ++ S++ + + EF NEA ++ +VV
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 110 NLLGYCAHGAEKLLIYEYVINESLDKVLFSL------------------------IKDIQ 145
LLG + G L++ E + + L L SL I D
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 146 ILFRKKK---TDIKASNILLDDKWIPKIADFGMAR-LFPEDQTHVNTRVAGTNGYMAPEY 201
KK D+ A N ++ + KI DFGM R ++ D + +MAPE
Sbjct: 144 AYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPES 203
Query: 202 VMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPS 261
+ G + +D++SFGVV+ E+ S L + Y+ ++ L+ V
Sbjct: 204 LKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVLKFV--- 245
Query: 262 LAASDSG--DQIAMC----IQIGLLCTQGDPQLRPTMRRVVVML 299
D G DQ C + +C Q +P++RPT +V +L
Sbjct: 246 ---MDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 117/282 (41%), Gaps = 57/282 (20%)
Query: 58 LGEGGFGPVFKG------KLDDGREIAVKKLSHSSNQGK-KEFENEAKLLARV-QHRNVV 109
LG G FG V + K R +AVK L + + + +E K+L + H NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 110 NLLGYCAH-GAEKLLIYEYVINESLDKVL------------------------------- 137
NLLG C G ++I E+ +L L
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 138 FSLIKDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN- 194
F + K ++ L +K D+ A NILL +K + KI DFG+AR +D +V A
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 205
Query: 195 GYMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKS 254
+MAPE + ++++DV+SFGV++ E+ S + + +D + K + ++
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR--RLKEGTRMRA 263
Query: 255 LEIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
+ P + Q L C G+P RPT +V
Sbjct: 264 PDYTTPEM------------YQTMLDCWHGEPSQRPTFSELV 293
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 117/282 (41%), Gaps = 57/282 (20%)
Query: 58 LGEGGFGPVFKG------KLDDGREIAVKKLSHSSNQGK-KEFENEAKLLARV-QHRNVV 109
LG G FG V + K R +AVK L + + + +E K+L + H NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 110 NLLGYCAH-GAEKLLIYEYVINESLDKVL------------------------------- 137
NLLG C G ++I E+ +L L
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 138 FSLIKDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN- 194
F + K ++ L +K D+ A NILL +K + KI DFG+AR +D +V A
Sbjct: 155 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 214
Query: 195 GYMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKS 254
+MAPE + ++++DV+SFGV++ E+ S + + +D + K + ++
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR--RLKEGTRMRA 272
Query: 255 LEIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
+ P + Q L C G+P RPT +V
Sbjct: 273 PDYTTPEM------------YQTMLDCWHGEPSQRPTFSELV 302
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 117/282 (41%), Gaps = 57/282 (20%)
Query: 58 LGEGGFGPVFKG------KLDDGREIAVKKLSHSSNQGK-KEFENEAKLLARV-QHRNVV 109
LG G FG V + K R +AVK L + + + +E K+L + H NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 110 NLLGYCAH-GAEKLLIYEYVINESLDKVL------------------------------- 137
NLLG C G ++I E+ +L L
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 138 FSLIKDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN- 194
F + K ++ L +K D+ A NILL +K + KI DFG+AR +D +V A
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 205
Query: 195 GYMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKS 254
+MAPE + ++++DV+SFGV++ E+ S + + +D + K + ++
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR--RLKEGTRMRA 263
Query: 255 LEIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
+ P + Q L C G+P RPT +V
Sbjct: 264 PDYTTPEM------------YQTMLDCWHGEPSQRPTFSELV 293
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 116/281 (41%), Gaps = 56/281 (19%)
Query: 58 LGEGGFGPVFKG------KLDDGREIAVKKLSHSSNQGK-KEFENEAKLLARV-QHRNVV 109
LG G FG V + K R +AVK L + + + +E K+L + H NVV
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 110 NLLGYCAH-GAEKLLIYEYVINESLDKVL------------------------------F 138
NLLG C G ++I E+ +L L F
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 139 SLIKDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN-G 195
+ K ++ L +K D+ A NILL +K + KI DFG+AR +D V A
Sbjct: 156 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK 215
Query: 196 YMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSL 255
+MAPE + ++++DV+SFGV++ E+ S + + +D + K + ++
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR--RLKEGTRMRAP 273
Query: 256 EIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
+ P + Q L C G+P RPT +V
Sbjct: 274 DYTTPEM------------YQTMLDCWHGEPSQRPTFSELV 302
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 119/280 (42%), Gaps = 56/280 (20%)
Query: 56 NKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYC 115
++G G FG V G + ++A+K + + +++F EA+++ ++ H +V L G C
Sbjct: 14 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVC 72
Query: 116 AHGAEKLLIYEYVINESLDKVL----------------------FSLIKDIQILFRKKKT 153
A L+ E++ + L L + +++ ++ R
Sbjct: 73 LEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHR---- 128
Query: 154 DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADV 213
D+ A N L+ + + K++DFGM R +DQ +T + +PE S K+DV
Sbjct: 129 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 188
Query: 214 FSFGVVILELIS-------GQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASD 266
+SFGV++ E+ S + NS D+ ++LYK P LA++
Sbjct: 189 WSFGVLMWEVFSEGKIPYENRSNSEVVEDIST------GFRLYK---------PRLASTH 233
Query: 267 SGDQIAMCIQIGLLCTQGDPQLRPTMRRVVVMLSKKPGPG 306
QI C + P+ RP R++ L++ G
Sbjct: 234 V-------YQIMNHCWRERPEDRPAFSRLLRQLAEIAESG 266
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 116/282 (41%), Gaps = 57/282 (20%)
Query: 58 LGEGGFGPVFKG------KLDDGREIAVKKLSHSSNQGK-KEFENEAKLLARV-QHRNVV 109
LG G FG V + K R +AVK L + + + +E K+L + H NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 110 NLLGYCAH-GAEKLLIYEYVINESLDKVL------------------------------- 137
NLLG C G ++I E+ +L L
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 138 FSLIKDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN- 194
F + K ++ L +K D+ A NILL +K + KI DFG+AR +D V A
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 205
Query: 195 GYMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKS 254
+MAPE + ++++DV+SFGV++ E+ S + + +D + K + ++
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR--RLKEGTRMRA 263
Query: 255 LEIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
+ P + Q L C G+P RPT +V
Sbjct: 264 PDYTTPEM------------YQTMLDCWHGEPSQRPTFSELV 293
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 116/282 (41%), Gaps = 57/282 (20%)
Query: 58 LGEGGFGPVFKG------KLDDGREIAVKKLSHSSNQGK-KEFENEAKLLARV-QHRNVV 109
LG G FG V + K R +AVK L + + + +E K+L + H NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 110 NLLGYCAH-GAEKLLIYEYVINESLDKVL------------------------------- 137
NLLG C G ++I E+ +L L
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 138 FSLIKDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN- 194
F + K ++ L +K D+ A NILL +K + KI DFG+AR +D V A
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 205
Query: 195 GYMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKS 254
+MAPE + ++++DV+SFGV++ E+ S + + +D + K + ++
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR--RLKEGTRMRA 263
Query: 255 LEIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
+ P + Q L C G+P RPT +V
Sbjct: 264 PDYTTPEM------------YQTMLDCWHGEPSQRPTFSELV 293
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 116/282 (41%), Gaps = 57/282 (20%)
Query: 58 LGEGGFGPVFKG------KLDDGREIAVKKLSHSSNQGK-KEFENEAKLLARV-QHRNVV 109
LG G FG V + K R +AVK L + + + +E K+L + H NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 110 NLLGYCAH-GAEKLLIYEYVINESLDKVL------------------------------- 137
NLLG C G ++I E+ +L L
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 138 FSLIKDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN- 194
F + K ++ L +K D+ A NILL +K + KI DFG+AR +D V A
Sbjct: 155 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 214
Query: 195 GYMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKS 254
+MAPE + ++++DV+SFGV++ E+ S + + +D + K + ++
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR--RLKEGTRMRA 272
Query: 255 LEIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
+ P + Q L C G+P RPT +V
Sbjct: 273 PDYTTPEM------------YQTMLDCWHGEPSQRPTFSELV 302
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 96/193 (49%), Gaps = 23/193 (11%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
++G G FG V+KGK + + ++ + Q + F+NE +L + +H N++ +GY
Sbjct: 19 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 78
Query: 117 HGAEKLLIYEYVINESL------DKVLFSLIKDIQILFRKKK------------TDIKAS 158
+ ++ ++ SL + F + K I I + + D+K++
Sbjct: 79 K-PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSN 137
Query: 159 NILLDDKWIPKIADFGMARLFPE-DQTHVNTRVAGTNGYMAPEYVM---HGHLSVKADVF 214
NI L + KI DFG+A + +H +++G+ +MAPE + S ++DV+
Sbjct: 138 NIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVY 197
Query: 215 SFGVVILELISGQ 227
+FG+V+ EL++GQ
Sbjct: 198 AFGIVLYELMTGQ 210
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 95/217 (43%), Gaps = 49/217 (22%)
Query: 58 LGEGGFGPVFKGK------LDDGREIAVKKL-SHSSNQGKKEFENEAKLLARVQHRNVVN 110
+GEG FG VF+ + + +AVK L +S + +F+ EA L+A + N+V
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 111 LLGYCAHGAEKLLIYEYVINESLDKVLFSLIKDI-------------------------- 144
LLG CA G L++EY+ L++ L S+
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 145 -QILFRKKKT--------------DIKASNILLDDKWIPKIADFGMAR-LFPEDQTHVNT 188
Q+ ++ D+ N L+ + + KIADFG++R ++ D +
Sbjct: 175 EQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADG 234
Query: 189 RVAGTNGYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
A +M PE + + + ++DV+++GVV+ E+ S
Sbjct: 235 NDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 120/287 (41%), Gaps = 68/287 (23%)
Query: 57 KLGEGGFGPVFKGKLDD------GREIAVKKLSHSSNQGKK-EFENEAKLLARVQHRNVV 109
+LG+G FG V++G D +AVK ++ S++ ++ EF NEA ++ +VV
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 110 NLLGYCAHGAEKLLIYEYVINESLDKVLFSL------------------------IKDIQ 145
LLG + G L++ E + + L L SL I D
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 146 ILFRKKK---TDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN----GYMA 198
KK D+ A N ++ + KI DFGM R E + R G +MA
Sbjct: 144 AYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYY---RKGGKGLLPVRWMA 200
Query: 199 PEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIV 258
PE + G + +D++SFGVV+ E+ S L + Y+ ++ L+ V
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVLKFV 245
Query: 259 DPSLAASDSG--DQIAMC----IQIGLLCTQGDPQLRPTMRRVVVML 299
D G DQ C + +C Q +P++RPT +V +L
Sbjct: 246 ------MDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 116/282 (41%), Gaps = 57/282 (20%)
Query: 58 LGEGGFGPVFKG------KLDDGREIAVKKLSHSSNQGK-KEFENEAKLLARV-QHRNVV 109
LG G FG V + K R +AVK L + + + +E K+L + H NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 110 NLLGYCAH-GAEKLLIYEYVINESLDKVL------------------------------- 137
NLLG C G ++I E+ +L L
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 138 FSLIKDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN- 194
F + K ++ L +K D+ A NILL +K + KI DFG+AR +D V A
Sbjct: 155 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPL 214
Query: 195 GYMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKS 254
+MAPE + ++++DV+SFGV++ E+ S + + +D + K + ++
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR--RLKEGTRMRA 272
Query: 255 LEIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
+ P + Q L C G+P RPT +V
Sbjct: 273 PDYTTPEM------------YQTMLDCWHGEPSQRPTFSELV 302
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 90/193 (46%), Gaps = 27/193 (13%)
Query: 57 KLGEGGFGPVFKGKL-DDGREIAVKKLSHS-SNQGKKEFENEAKLLARVQHRNVVNLLGY 114
++G G FG VF G+L D +AVK + K +F EA++L + H N+V L+G
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 180
Query: 115 CAHGAEKLLIYEYVINESL------------DKVLFSLIKDIQ--ILFRKKKT----DIK 156
C ++ E V K L ++ D + + + K D+
Sbjct: 181 CTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLA 240
Query: 157 ASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNG----YMAPEYVMHGHLSVKAD 212
A N L+ +K + KI+DFGM+R E+ V G + APE + +G S ++D
Sbjct: 241 ARNCLVTEKNVLKISDFGMSR---EEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESD 297
Query: 213 VFSFGVVILELIS 225
V+SFG+++ E S
Sbjct: 298 VWSFGILLWETFS 310
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 90/193 (46%), Gaps = 27/193 (13%)
Query: 57 KLGEGGFGPVFKGKL-DDGREIAVKKLSHS-SNQGKKEFENEAKLLARVQHRNVVNLLGY 114
++G G FG VF G+L D +AVK + K +F EA++L + H N+V L+G
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 180
Query: 115 CAHGAEKLLIYEYVINESL------------DKVLFSLIKDIQ--ILFRKKKT----DIK 156
C ++ E V K L ++ D + + + K D+
Sbjct: 181 CTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLA 240
Query: 157 ASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNG----YMAPEYVMHGHLSVKAD 212
A N L+ +K + KI+DFGM+R E+ V G + APE + +G S ++D
Sbjct: 241 ARNCLVTEKNVLKISDFGMSR---EEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESD 297
Query: 213 VFSFGVVILELIS 225
V+SFG+++ E S
Sbjct: 298 VWSFGILLWETFS 310
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 22/195 (11%)
Query: 52 FHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVN 110
F KLGEG +G V+K + G+ +A+K++ S+ +E E ++ + +VV
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDL--QEIIKEISIMQQCDSPHVVK 88
Query: 111 LLG-------------YCAHGAEKLLIY---EYVINESLDKVLFSLIKDIQIL--FRKKK 152
G YC G+ +I + + + + +L S +K ++ L RK
Sbjct: 89 YYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIH 148
Query: 153 TDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKAD 212
DIKA NILL+ + K+ADFG+A + N V GT +MAPE + + AD
Sbjct: 149 RDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNX-VIGTPFWMAPEVIQEIGYNCVAD 207
Query: 213 VFSFGVVILELISGQ 227
++S G+ +E+ G+
Sbjct: 208 IWSLGITAIEMAEGK 222
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 18/195 (9%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNV 108
K + K+G+G G V+ + G+E+A+++++ K+ NE ++ ++ N+
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 79
Query: 109 VNLLGYCAHGAEKLLIYEYVINESLDKVLFSLIKD---IQILFRKK-------------K 152
VN L G E ++ EY+ SL V+ D I + R+
Sbjct: 80 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIH 139
Query: 153 TDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKAD 212
DIK+ NILL K+ DFG +Q+ +T V GT +MAPE V K D
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKVD 198
Query: 213 VFSFGVVILELISGQ 227
++S G++ +E+I G+
Sbjct: 199 IWSLGIMAIEMIEGE 213
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 95/193 (49%), Gaps = 23/193 (11%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
++G G FG V+KGK + + ++ + Q + F+NE +L + +H N++ +GY
Sbjct: 31 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 90
Query: 117 HGAEKLLIYEYVINESL------DKVLFSLIKDIQILFRKKK------------TDIKAS 158
+ ++ ++ SL + F + K I I + + D+K++
Sbjct: 91 -APQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSN 149
Query: 159 NILLDDKWIPKIADFGMARLFPE-DQTHVNTRVAGTNGYMAPEYVM---HGHLSVKADVF 214
NI L + KI DFG+A +H +++G+ +MAPE + S ++DV+
Sbjct: 150 NIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVY 209
Query: 215 SFGVVILELISGQ 227
+FG+V+ EL++GQ
Sbjct: 210 AFGIVLYELMTGQ 222
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 92/197 (46%), Gaps = 37/197 (18%)
Query: 58 LGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA- 116
+G G FG V K K +++A+K++ S +K F E + L+RV H N+V L G C
Sbjct: 17 VGRGAFGVVCKAKWR-AKDVAIKQIESESE--RKAFIVELRQLSRVNHPNIVKLYGACLN 73
Query: 117 ------------------HGAEKLLIY------EYVINESLDKVLFSLIKDIQILFRKKK 152
HGAE L Y + + S ++ ++ R
Sbjct: 74 PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHR--- 130
Query: 153 TDIKASNILL-DDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKA 211
D+K N+LL + KI DFG A + QTH+ T G+ +MAPE + S K
Sbjct: 131 -DLKPPNLLLVAGGTVLKICDFGTAC---DIQTHM-TNNKGSAAWMAPEVFEGSNYSEKC 185
Query: 212 DVFSFGVVILELISGQR 228
DVFS+G+++ E+I+ ++
Sbjct: 186 DVFSWGIILWEVITRRK 202
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 119/284 (41%), Gaps = 62/284 (21%)
Query: 57 KLGEGGFGPVFKGKLDD------GREIAVKKLSHSSN-QGKKEFENEAKLLARVQHRNVV 109
+LG+G FG V++G D +AVK ++ S++ + + EF NEA ++ +VV
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 110 NLLGYCAHGAEKLLIYEYVINESLDKVLFSL------------------------IKDIQ 145
LLG + G L++ E + + L L SL I D
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 146 ILFRKKK---TDIKASNILLDDKWIPKIADFGMAR-LFPEDQTHVNTRVAGTNGYMAPEY 201
KK ++ A N ++ + KI DFGM R ++ D + +MAPE
Sbjct: 144 AYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPES 203
Query: 202 VMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPS 261
+ G + +D++SFGVV+ E+ S L + Y+ ++ L+ V
Sbjct: 204 LKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVLKFV--- 245
Query: 262 LAASDSG--DQIAMC----IQIGLLCTQGDPQLRPTMRRVVVML 299
D G DQ C + +C Q +P +RPT +V +L
Sbjct: 246 ---MDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 286
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 119/284 (41%), Gaps = 62/284 (21%)
Query: 57 KLGEGGFGPVFKGKLDD------GREIAVKKLSHSSN-QGKKEFENEAKLLARVQHRNVV 109
+LG+G FG V++G D +AVK ++ S++ + + EF NEA ++ +VV
Sbjct: 25 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 84
Query: 110 NLLGYCAHGAEKLLIYEYVINESLDKVLFSL------------------------IKDIQ 145
LLG + G L++ E + + L L SL I D
Sbjct: 85 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 144
Query: 146 ILFRKKK---TDIKASNILLDDKWIPKIADFGMAR-LFPEDQTHVNTRVAGTNGYMAPEY 201
KK ++ A N ++ + KI DFGM R ++ D + +MAPE
Sbjct: 145 AYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPES 204
Query: 202 VMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPS 261
+ G + +D++SFGVV+ E+ S L + Y+ ++ L+ V
Sbjct: 205 LKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVLKFV--- 246
Query: 262 LAASDSG--DQIAMC----IQIGLLCTQGDPQLRPTMRRVVVML 299
D G DQ C + +C Q +P +RPT +V +L
Sbjct: 247 ---MDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 287
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 106/225 (47%), Gaps = 28/225 (12%)
Query: 27 EDLEKIAAREQKHFPFEALVSATKNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHSS 86
++ KI R Q+ + + A++ S ++G G FG V+KGK + + K+ +
Sbjct: 14 QEKNKIRPRGQRDSSYYWEIEASE-VMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPT 72
Query: 87 NQGKKEFENEAKLLARVQHRNVVNLLGY--------CAHGAEKLLIYEYVINESLDKVLF 138
+ + F NE +L + +H N++ +GY E +Y+++ + +F
Sbjct: 73 PEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMF 132
Query: 139 SLI-------KDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMA----RLFPEDQTH 185
LI + + L K D+K++NI L + KI DFG+A R Q
Sbjct: 133 QLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVE 192
Query: 186 VNTRVAGTNGYMAPEYVM---HGHLSVKADVFSFGVVILELISGQ 227
T G+ +MAPE + + S ++DV+S+G+V+ EL++G+
Sbjct: 193 QPT---GSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGE 234
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 92/197 (46%), Gaps = 37/197 (18%)
Query: 58 LGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA- 116
+G G FG V K K +++A+K++ S +K F E + L+RV H N+V L G C
Sbjct: 16 VGRGAFGVVCKAKWR-AKDVAIKQIESESE--RKAFIVELRQLSRVNHPNIVKLYGACLN 72
Query: 117 ------------------HGAEKLLIY------EYVINESLDKVLFSLIKDIQILFRKKK 152
HGAE L Y + + S ++ ++ R
Sbjct: 73 PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHR--- 129
Query: 153 TDIKASNILL-DDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKA 211
D+K N+LL + KI DFG A + QTH+ T G+ +MAPE + S K
Sbjct: 130 -DLKPPNLLLVAGGTVLKICDFGTAC---DIQTHM-TNNKGSAAWMAPEVFEGSNYSEKC 184
Query: 212 DVFSFGVVILELISGQR 228
DVFS+G+++ E+I+ ++
Sbjct: 185 DVFSWGIILWEVITRRK 201
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 95/193 (49%), Gaps = 23/193 (11%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
++G G FG V+KGK + + ++ + Q + F+NE +L + +H N++ +GY
Sbjct: 31 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 90
Query: 117 HGAEKLLIYEYVINESL------DKVLFSLIKDIQILFRKKK------------TDIKAS 158
+ ++ ++ SL + F + K I I + + D+K++
Sbjct: 91 K-PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSN 149
Query: 159 NILLDDKWIPKIADFGMARLFPE-DQTHVNTRVAGTNGYMAPEYVM---HGHLSVKADVF 214
NI L + KI DFG+A +H +++G+ +MAPE + S ++DV+
Sbjct: 150 NIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVY 209
Query: 215 SFGVVILELISGQ 227
+FG+V+ EL++GQ
Sbjct: 210 AFGIVLYELMTGQ 222
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 102/216 (47%), Gaps = 21/216 (9%)
Query: 32 IAAREQKHFPFEALVSATKNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKK 91
++++ QK + +A ++ KLG G FG V+ + ++AVK + S +
Sbjct: 170 MSSKPQKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVE 228
Query: 92 EFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVL-------------- 137
F EA ++ +QH +V L +I E++ SL L
Sbjct: 229 AFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLI 287
Query: 138 -FSLIKDIQILFRKKKT----DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAG 192
FS + F +++ D++A+NIL+ + KIADFG+AR+ +++
Sbjct: 288 DFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF 347
Query: 193 TNGYMAPEYVMHGHLSVKADVFSFGVVILELISGQR 228
+ APE + G ++K+DV+SFG++++E+++ R
Sbjct: 348 PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGR 383
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 128/287 (44%), Gaps = 67/287 (23%)
Query: 58 LGEGGFGPVF--------KGKLDDGREIAVKKL-SHSSNQGKKEFENEAKLLARV-QHRN 107
LGEG FG V K K + ++AVK L S ++ + + +E +++ + +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 108 VVNLLGYCAHGAEKLLIYEYVINESLDKVL------------------------------ 137
++NLLG C +I EY +L + L
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 138 -FSLIKDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN 194
+ + + ++ L KK D+ A N+L+ + + KIADFG+AR D H++ TN
Sbjct: 156 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDXXKKTTN 211
Query: 195 G-----YMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLY 249
G +MAPE + + ++DV+SFGV++ E+ + + + V+ +KL
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE------LFKLL 265
Query: 250 KKDKSLEIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
K+ ++ S+ +++ M ++ C P RPT +++V
Sbjct: 266 KEGHRMD------KPSNCTNELYMMMRD---CWHAVPSQRPTFKQLV 303
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 114/274 (41%), Gaps = 58/274 (21%)
Query: 50 KNFHPSNKLGEGGFGPVFKG------KLDDGREIAVKKLSHSSNQGKKE-FENEAKLLAR 102
+N LG G FG V K ++AVK L ++ ++E +E K++ +
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104
Query: 103 V-QHRNVVNLLGYCAHGAEKLLIYEYVIN------------------------------- 130
+ H N+VNLLG C LI+EY
Sbjct: 105 LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 164
Query: 131 -------ESLDKVLFSLIKDIQILFRKKKT--DIKASNILLDDKWIPKIADFGMARLFPE 181
E L + + K ++ L K D+ A N+L+ + KI DFG+AR
Sbjct: 165 DLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMS 224
Query: 182 DQTHV---NTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDA 238
D +V N R+ +MAPE + G ++K+DV+S+G+++ E+ S N + VDA
Sbjct: 225 DSNYVVRGNARLPVK--WMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA 282
Query: 239 Q--NLLDWAYKL---YKKDKSLEIVDPSLAASDS 267
L+ +K+ + + + I+ S A DS
Sbjct: 283 NFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDS 316
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 92/196 (46%), Gaps = 20/196 (10%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNV 108
K + K+G+G G V+ + G+E+A+++++ K+ NE ++ ++ N+
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 79
Query: 109 VNLLGYCAHGAEKLLIYEYVINESLDKVLFSLIKD---IQILFRKK-------------K 152
VN L G E ++ EY+ SL V+ D I + R+
Sbjct: 80 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIH 139
Query: 153 TDIKASNILLDDKWIPKIADFGM-ARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKA 211
DIK+ NILL K+ DFG A++ PE + + GT +MAPE V K
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SEMVGTPYWMAPEVVTRKAYGPKV 197
Query: 212 DVFSFGVVILELISGQ 227
D++S G++ +E+I G+
Sbjct: 198 DIWSLGIMAIEMIEGE 213
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 128/287 (44%), Gaps = 67/287 (23%)
Query: 58 LGEGGFGPVF--------KGKLDDGREIAVKKL-SHSSNQGKKEFENEAKLLARV-QHRN 107
LGEG FG V K K + ++AVK L S ++ + + +E +++ + +H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 108 VVNLLGYCAHGAEKLLIYEYVINESLDKVL------------------------------ 137
++NLLG C +I EY +L + L
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 138 -FSLIKDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN 194
+ + + ++ L KK D+ A N+L+ + + KIADFG+AR D H++ TN
Sbjct: 145 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKKTTN 200
Query: 195 G-----YMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLY 249
G +MAPE + + ++DV+SFGV++ E+ + + + V+ +KL
Sbjct: 201 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE------LFKLL 254
Query: 250 KKDKSLEIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
K+ ++ S+ +++ M ++ C P RPT +++V
Sbjct: 255 KEGHRMD------KPSNCTNELYMMMRD---CWHAVPSQRPTFKQLV 292
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 97/207 (46%), Gaps = 22/207 (10%)
Query: 57 KLGEGGFGPVFKGK-LDDGREIAVKKLSHSSNQG--KKEFENEAKLLARVQHRNVVNLLG 113
K+GEG +G VFK + D G+ +A+KK S + KK E ++L +++H N+VNLL
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 114 YCAHGAEKLLIYEYV---INESLDK----VLFSLIKDIQ------ILFRKKKT----DIK 156
L++EY + LD+ V L+K I + F K D+K
Sbjct: 70 VFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVK 129
Query: 157 ASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVM-HGHLSVKADVFS 215
NIL+ + K+ DFG ARL + + VA T Y +PE ++ DV++
Sbjct: 130 PENILITKHSVIKLCDFGFARLLTGPSDYYDDEVA-TRWYRSPELLVGDTQYGPPVDVWA 188
Query: 216 FGVVILELISGQRNSSFNLDVDAQNLL 242
G V EL+SG DVD L+
Sbjct: 189 IGCVFAELLSGVPLWPGKSDVDQLYLI 215
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 128/287 (44%), Gaps = 67/287 (23%)
Query: 58 LGEGGFGPVF--------KGKLDDGREIAVKKL-SHSSNQGKKEFENEAKLLARV-QHRN 107
LGEG FG V K K + ++AVK L S ++ + + +E +++ + +H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 108 VVNLLGYCAHGAEKLLIYEYVINESLDKVL------------------------------ 137
++NLLG C +I EY +L + L
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 138 -FSLIKDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN 194
+ + + ++ L KK D+ A N+L+ + + KIADFG+AR D H++ TN
Sbjct: 197 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKKTTN 252
Query: 195 G-----YMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLY 249
G +MAPE + + ++DV+SFGV++ E+ + + + V+ +KL
Sbjct: 253 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE------LFKLL 306
Query: 250 KKDKSLEIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
K+ ++ S+ +++ M ++ C P RPT +++V
Sbjct: 307 KEGHRMD------KPSNCTNELYMMMRD---CWHAVPSQRPTFKQLV 344
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 109/220 (49%), Gaps = 32/220 (14%)
Query: 48 ATKNFHPSNK---LGEGGFGPVFKGK-LDDGREIAVKKLSHSSNQGKKEFENEAKLLARV 103
A +F+ +K LG G FG V K + G ++A K + + K+E +NE ++ ++
Sbjct: 84 AVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL 143
Query: 104 QHRNVVNLLGYCAHGAEKLLIYEYVIN-ESLDKVL---FSLIKDIQILFRKK-------- 151
H N++ L + +L+ EYV E D+++ ++L + ILF K+
Sbjct: 144 DHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHM 203
Query: 152 ------KTDIKASNILL---DDKWIPKIADFGMARLF-PEDQTHVNTRVAGTNGYMAPEY 201
D+K NIL D K I KI DFG+AR + P ++ VN GT ++APE
Sbjct: 204 HQMYILHLDLKPENILCVNRDAKQI-KIIDFGLARRYKPREKLKVNF---GTPEFLAPEV 259
Query: 202 VMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNL 241
V + +S D++S GV+ L+SG S F D DA+ L
Sbjct: 260 VNYDFVSFPTDMWSVGVIAYMLLSGL--SPFLGDNDAETL 297
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 92/196 (46%), Gaps = 20/196 (10%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNV 108
K + K+G+G G V+ + G+E+A+++++ K+ NE ++ ++ N+
Sbjct: 21 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 80
Query: 109 VNLLGYCAHGAEKLLIYEYVINESLDKVLFSLIKD---IQILFRKK-------------K 152
VN L G E ++ EY+ SL V+ D I + R+
Sbjct: 81 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIH 140
Query: 153 TDIKASNILLDDKWIPKIADFGM-ARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKA 211
DIK+ NILL K+ DFG A++ PE + + GT +MAPE V K
Sbjct: 141 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SXMVGTPYWMAPEVVTRKAYGPKV 198
Query: 212 DVFSFGVVILELISGQ 227
D++S G++ +E+I G+
Sbjct: 199 DIWSLGIMAIEMIEGE 214
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 128/287 (44%), Gaps = 67/287 (23%)
Query: 58 LGEGGFGPVF--------KGKLDDGREIAVKKL-SHSSNQGKKEFENEAKLLARV-QHRN 107
LGEG FG V K K + ++AVK L S ++ + + +E +++ + +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 108 VVNLLGYCAHGAEKLLIYEYVINESLDKVL------------------------------ 137
++NLLG C +I EY +L + L
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 138 -FSLIKDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN 194
+ + + ++ L KK D+ A N+L+ + + KIADFG+AR D H++ TN
Sbjct: 156 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKKTTN 211
Query: 195 G-----YMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLY 249
G +MAPE + + ++DV+SFGV++ E+ + + + V+ +KL
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE------LFKLL 265
Query: 250 KKDKSLEIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
K+ ++ S+ +++ M ++ C P RPT +++V
Sbjct: 266 KEGHRMD------KPSNCTNELYMMMRD---CWHAVPSQRPTFKQLV 303
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 128/287 (44%), Gaps = 67/287 (23%)
Query: 58 LGEGGFGPVF--------KGKLDDGREIAVKKL-SHSSNQGKKEFENEAKLLARV-QHRN 107
LGEG FG V K K + ++AVK L S ++ + + +E +++ + +H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 108 VVNLLGYCAHGAEKLLIYEYVINESLDKVL------------------------------ 137
++NLLG C +I EY +L + L
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 138 -FSLIKDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN 194
+ + + ++ L KK D+ A N+L+ + + KIADFG+AR D H++ TN
Sbjct: 148 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKKTTN 203
Query: 195 G-----YMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLY 249
G +MAPE + + ++DV+SFGV++ E+ + + + V+ +KL
Sbjct: 204 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE------LFKLL 257
Query: 250 KKDKSLEIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
K+ ++ S+ +++ M ++ C P RPT +++V
Sbjct: 258 KEGHRMD------KPSNCTNELYMMMRD---CWHAVPSQRPTFKQLV 295
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 128/287 (44%), Gaps = 67/287 (23%)
Query: 58 LGEGGFGPVF--------KGKLDDGREIAVKKL-SHSSNQGKKEFENEAKLLARV-QHRN 107
LGEG FG V K K + ++AVK L S ++ + + +E +++ + +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 108 VVNLLGYCAHGAEKLLIYEYVINESLDKVL------------------------------ 137
++NLLG C +I EY +L + L
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 138 -FSLIKDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN 194
+ + + ++ L KK D+ A N+L+ + + KIADFG+AR D H++ TN
Sbjct: 156 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKKTTN 211
Query: 195 G-----YMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLY 249
G +MAPE + + ++DV+SFGV++ E+ + + + V+ +KL
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE------LFKLL 265
Query: 250 KKDKSLEIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
K+ ++ S+ +++ M ++ C P RPT +++V
Sbjct: 266 KEGHRMD------KPSNCTNELYMMMRD---CWHAVPSQRPTFKQLV 303
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 94/194 (48%), Gaps = 19/194 (9%)
Query: 52 FHPSNKLGEGGFGPVFKGKLDDGREIAVKKLS--HSSNQGKKEFENEAKLLARVQHRNVV 109
F K+G+G FG VFKG + +++ K+ + ++ + E +L++ V
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 110 NLLGYCAHGAEKLLIYEYV-------------INES-LDKVLFSLIKDIQILFRKKKT-- 153
G + +I EY+ ++E+ + +L ++K + L +KK
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHR 128
Query: 154 DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADV 213
DIKA+N+LL + K+ADFG+A + Q NT V GT +MAPE + KAD+
Sbjct: 129 DIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAYDSKADI 187
Query: 214 FSFGVVILELISGQ 227
+S G+ +EL G+
Sbjct: 188 WSLGITAIELARGE 201
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 92/196 (46%), Gaps = 20/196 (10%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNV 108
K + K+G+G G V+ + G+E+A+++++ K+ NE ++ ++ N+
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 79
Query: 109 VNLLGYCAHGAEKLLIYEYVINESLDKVLFSLIKD---IQILFRKK-------------K 152
VN L G E ++ EY+ SL V+ D I + R+
Sbjct: 80 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIH 139
Query: 153 TDIKASNILLDDKWIPKIADFGM-ARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKA 211
DIK+ NILL K+ DFG A++ PE + + GT +MAPE V K
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SXMVGTPYWMAPEVVTRKAYGPKV 197
Query: 212 DVFSFGVVILELISGQ 227
D++S G++ +E+I G+
Sbjct: 198 DIWSLGIMAIEMIEGE 213
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 128/287 (44%), Gaps = 67/287 (23%)
Query: 58 LGEGGFGPVF--------KGKLDDGREIAVKKL-SHSSNQGKKEFENEAKLLARV-QHRN 107
LGEG FG V K K + ++AVK L S ++ + + +E +++ + +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 108 VVNLLGYCAHGAEKLLIYEYVINESLDKVL------------------------------ 137
++NLLG C +I EY +L + L
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 138 -FSLIKDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN 194
+ + + ++ L KK D+ A N+L+ + + KIADFG+AR D H++ TN
Sbjct: 156 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKKTTN 211
Query: 195 G-----YMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLY 249
G +MAPE + + ++DV+SFGV++ E+ + + + V+ +KL
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE------LFKLL 265
Query: 250 KKDKSLEIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
K+ ++ S+ +++ M ++ C P RPT +++V
Sbjct: 266 KEGHRMD------KPSNCTNELYMMMRD---CWHAVPSQRPTFKQLV 303
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 128/287 (44%), Gaps = 67/287 (23%)
Query: 58 LGEGGFGPVF--------KGKLDDGREIAVKKL-SHSSNQGKKEFENEAKLLARV-QHRN 107
LGEG FG V K K + ++AVK L S ++ + + +E +++ + +H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 108 VVNLLGYCAHGAEKLLIYEYVINESLDKVL------------------------------ 137
++NLLG C +I EY +L + L
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 138 -FSLIKDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN 194
+ + + ++ L KK D+ A N+L+ + + KIADFG+AR D H++ TN
Sbjct: 149 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKKTTN 204
Query: 195 G-----YMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLY 249
G +MAPE + + ++DV+SFGV++ E+ + + + V+ +KL
Sbjct: 205 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE------LFKLL 258
Query: 250 KKDKSLEIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
K+ ++ S+ +++ M ++ C P RPT +++V
Sbjct: 259 KEGHRMD------KPSNCTNELYMMMRD---CWHAVPSQRPTFKQLV 296
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 128/287 (44%), Gaps = 67/287 (23%)
Query: 58 LGEGGFGPVF--------KGKLDDGREIAVKKL-SHSSNQGKKEFENEAKLLARV-QHRN 107
LGEG FG V K K + ++AVK L S ++ + + +E +++ + +H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 108 VVNLLGYCAHGAEKLLIYEYVINESLDKVL------------------------------ 137
++NLLG C +I EY +L + L
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 138 -FSLIKDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN 194
+ + + ++ L KK D+ A N+L+ + + KIADFG+AR D H++ TN
Sbjct: 141 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKKTTN 196
Query: 195 G-----YMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLY 249
G +MAPE + + ++DV+SFGV++ E+ + + + V+ +KL
Sbjct: 197 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE------LFKLL 250
Query: 250 KKDKSLEIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
K+ ++ S+ +++ M ++ C P RPT +++V
Sbjct: 251 KEGHRMD------KPSNCTNELYMMMRD---CWHAVPSQRPTFKQLV 288
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 94/194 (48%), Gaps = 19/194 (9%)
Query: 52 FHPSNKLGEGGFGPVFKGKLDDGREIAVKKLS--HSSNQGKKEFENEAKLLARVQHRNVV 109
F K+G+G FG VFKG + +++ K+ + ++ + E +L++ V
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 110 NLLGYCAHGAEKLLIYEYV-------------INES-LDKVLFSLIKDIQILFRKKKT-- 153
G + +I EY+ ++E+ + +L ++K + L +KK
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHR 148
Query: 154 DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADV 213
DIKA+N+LL + K+ADFG+A + Q NT V GT +MAPE + KAD+
Sbjct: 149 DIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAYDSKADI 207
Query: 214 FSFGVVILELISGQ 227
+S G+ +EL G+
Sbjct: 208 WSLGITAIELARGE 221
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 91/191 (47%), Gaps = 21/191 (10%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
KLG G FG V+ + ++AVK + S + F EA ++ +QH +V L
Sbjct: 22 KLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT 80
Query: 117 HGAEKLLIYEYVINESLDKVL---------------FSLIKDIQILFRKKKT----DIKA 157
+I E++ SL L FS + F +++ D++A
Sbjct: 81 K-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRA 139
Query: 158 SNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFG 217
+NIL+ + KIADFG+AR+ +++ + APE + G ++K+DV+SFG
Sbjct: 140 ANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFG 199
Query: 218 VVILELISGQR 228
++++E+++ R
Sbjct: 200 ILLMEIVTYGR 210
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 18/195 (9%)
Query: 50 KNFHPSNKLGEGGFGPVFKGK-LDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNV 108
K + K+G+G G V+ + G+E+A+++++ K+ NE ++ ++ N+
Sbjct: 21 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 80
Query: 109 VNLLGYCAHGAEKLLIYEYVINESLDKVLFSLIKD---IQILFRKK-------------K 152
VN L G E ++ EY+ SL V+ D I + R+
Sbjct: 81 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIH 140
Query: 153 TDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKAD 212
+IK+ NILL K+ DFG +Q+ +T V GT +MAPE V K D
Sbjct: 141 RNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKVD 199
Query: 213 VFSFGVVILELISGQ 227
++S G++ +E+I G+
Sbjct: 200 IWSLGIMAIEMIEGE 214
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 96/198 (48%), Gaps = 19/198 (9%)
Query: 52 FHPSNKLGEGGFGPVFKGKLDDGREIAVKKLS--HSSNQGKKEFENEAKLLARVQHRNVV 109
F +++G+G FG V+KG + +E+ K+ + ++ + E +L++ +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 110 NLLGYCAHGAEKLLIYEYV-------------INES-LDKVLFSLIKDIQILFRKKKT-- 153
G + +I EY+ + E+ + +L ++K + L ++K
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHR 140
Query: 154 DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADV 213
DIKA+N+LL ++ K+ADFG+A + Q N V GT +MAPE + KAD+
Sbjct: 141 DIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAYDFKADI 199
Query: 214 FSFGVVILELISGQRNSS 231
+S G+ +EL G+ +S
Sbjct: 200 WSLGITAIELAKGEPPNS 217
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 113/266 (42%), Gaps = 44/266 (16%)
Query: 50 KNFHPSNKLGEGGFGPVFKGK-LDDGREIAVKKLSHSSNQGKKEFEN---EAKLLARVQH 105
K F ++G G FG V+ + + + +A+KK+S+S Q +++++ E + L +++H
Sbjct: 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH 113
Query: 106 RNVVNLLGYCAHGAEKLLIYEYVINESLD---------------KVLFSLIKDIQILFRK 150
N + G L+ EY + + D V ++ + L
Sbjct: 114 PNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH 173
Query: 151 KKT--DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVM---HG 205
D+KA NILL + + K+ DFG A + V GT +MAPE ++ G
Sbjct: 174 NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEVILAMDEG 228
Query: 206 HLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAAS 265
K DV+S G+ +EL + ++ FN+ N + Y + + + P+L +
Sbjct: 229 QYDGKVDVWSLGITCIEL-AERKPPLFNM-----NAMSALYHIAQNE------SPALQSG 276
Query: 266 DSGDQIAMCIQIGLLCTQGDPQLRPT 291
+ + C Q PQ RPT
Sbjct: 277 HWSEYFRNFVDS---CLQKIPQDRPT 299
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 113/266 (42%), Gaps = 44/266 (16%)
Query: 50 KNFHPSNKLGEGGFGPVFKGK-LDDGREIAVKKLSHSSNQGKKEFEN---EAKLLARVQH 105
K F ++G G FG V+ + + + +A+KK+S+S Q +++++ E + L +++H
Sbjct: 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH 74
Query: 106 RNVVNLLGYCAHGAEKLLIYEYVINESLD---------------KVLFSLIKDIQILFRK 150
N + G L+ EY + + D V ++ + L
Sbjct: 75 PNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH 134
Query: 151 KKT--DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVM---HG 205
D+KA NILL + + K+ DFG A + V GT +MAPE ++ G
Sbjct: 135 NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEVILAMDEG 189
Query: 206 HLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAAS 265
K DV+S G+ +EL + ++ FN+ N + Y + + + P+L +
Sbjct: 190 QYDGKVDVWSLGITCIEL-AERKPPLFNM-----NAMSALYHIAQNE------SPALQSG 237
Query: 266 DSGDQIAMCIQIGLLCTQGDPQLRPT 291
+ + C Q PQ RPT
Sbjct: 238 HWSEYFRNFVDS---CLQKIPQDRPT 260
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 93/194 (47%), Gaps = 19/194 (9%)
Query: 52 FHPSNKLGEGGFGPVFKGKLDDGREIAVKKLS--HSSNQGKKEFENEAKLLARVQHRNVV 109
F K+G+G FG VFKG + +++ K+ + ++ + E +L++ V
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 110 NLLGYCAHGAEKLLIYEYV-------------INES-LDKVLFSLIKDIQILFRKKKT-- 153
G + +I EY+ ++E+ + +L ++K + L +KK
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHR 143
Query: 154 DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADV 213
DIKA+N+LL + K+ADFG+A + Q N V GT +MAPE + KAD+
Sbjct: 144 DIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAYDSKADI 202
Query: 214 FSFGVVILELISGQ 227
+S G+ +EL G+
Sbjct: 203 WSLGITAIELARGE 216
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 93/194 (47%), Gaps = 19/194 (9%)
Query: 52 FHPSNKLGEGGFGPVFKGKLDDGREIAVKKLS--HSSNQGKKEFENEAKLLARVQHRNVV 109
F K+G+G FG VFKG + +++ K+ + ++ + E +L++ V
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 110 NLLGYCAHGAEKLLIYEYV-------------INES-LDKVLFSLIKDIQILFRKKKT-- 153
G + +I EY+ ++E+ + +L ++K + L +KK
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHR 128
Query: 154 DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADV 213
DIKA+N+LL + K+ADFG+A + Q N V GT +MAPE + KAD+
Sbjct: 129 DIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAYDSKADI 187
Query: 214 FSFGVVILELISGQ 227
+S G+ +EL G+
Sbjct: 188 WSLGITAIELARGE 201
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 94/193 (48%), Gaps = 26/193 (13%)
Query: 58 LGEGGFGPVFKG-KLDDGREI----AVKKLSHSSN-QGKKEFENEAKLLARVQHRNVVNL 111
LG G FG V+KG + +G + A+K L+ ++ + EF +EA ++A + H ++V L
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 112 LGYCAHGAEKLL--------IYEYVINESLDKVLFSLIKDIQILFRKKKT---------- 153
LG C +L+ + EYV +E D + L+ + + K
Sbjct: 106 LGVCLSPTIQLVTQLMPHGCLLEYV-HEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHR 164
Query: 154 DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN-GYMAPEYVMHGHLSVKAD 212
D+ A N+L+ KI DFG+ARL D+ N +MA E + + + ++D
Sbjct: 165 DLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSD 224
Query: 213 VFSFGVVILELIS 225
V+S+GV I EL++
Sbjct: 225 VWSYGVTIWELMT 237
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 52/216 (24%)
Query: 58 LGEGGFGPVF--------KGKLDDGREIAVKKLSHSSNQGK-KEFENEAKLLARV-QHRN 107
LGEG FG V K K + +AVK L + + + +E +++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 108 VVNLLGYCAHGAEKLLIYEYVINESLDKVL------------------------------ 137
++NLLG C +I EY +L + L
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 138 -FSLIKDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN 194
+ L + ++ L +K D+ A N+L+ + + KIADFG+AR D +++ TN
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDXXKKTTN 218
Query: 195 G-----YMAPEYVMHGHLSVKADVFSFGVVILELIS 225
G +MAPE + + ++DV+SFGV++ E+ +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 52/216 (24%)
Query: 58 LGEGGFGPVF--------KGKLDDGREIAVKKLSHSSNQGK-KEFENEAKLLARV-QHRN 107
LGEG FG V K K + +AVK L + + + +E +++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 108 VVNLLGYCAHGAEKLLIYEYVINESLDKVL------------------------------ 137
++NLLG C +I EY +L + L
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 138 -FSLIKDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN 194
+ L + ++ L +K D+ A N+L+ + + KIADFG+AR D +++ TN
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDXXKKTTN 218
Query: 195 G-----YMAPEYVMHGHLSVKADVFSFGVVILELIS 225
G +MAPE + + ++DV+SFGV++ E+ +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 100/193 (51%), Gaps = 26/193 (13%)
Query: 58 LGEGGFGPVFKG-KLDDGREI----AVKKLSHSSN-QGKKEFENEAKLLARVQHRNVVNL 111
LG G FG V+KG + +G + A+K L+ ++ + EF +EA ++A + H ++V L
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 112 LGYCAHGAEKLL--------IYEYVINESLDKVLFSLIKD--IQI----LFRKKKT---- 153
LG C +L+ + EYV +E D + L+ + +QI ++ +++
Sbjct: 83 LGVCLSPTIQLVTQLMPHGCLLEYV-HEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHR 141
Query: 154 DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN-GYMAPEYVMHGHLSVKAD 212
D+ A N+L+ KI DFG+ARL D+ N +MA E + + + ++D
Sbjct: 142 DLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSD 201
Query: 213 VFSFGVVILELIS 225
V+S+GV I EL++
Sbjct: 202 VWSYGVTIWELMT 214
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 87/194 (44%), Gaps = 26/194 (13%)
Query: 58 LGEGGFGPVFKGKLD-----DGREIAVKKLSHSSN-QGKKEFENEAKLLARVQHRNVVNL 111
LGEG FG V D G +AVK L Q + ++ E ++L + H ++V
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 112 LGYCAHGAEK--LLIYEYVINESL-DKVLFSLIKDIQILFRKKKT--------------- 153
G C EK L+ EYV SL D + + Q+L ++
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQHYIHR 136
Query: 154 DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNG--YMAPEYVMHGHLSVKA 211
+ A N+LLD+ + KI DFG+A+ PE + R G + + APE + +
Sbjct: 137 ALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYAS 196
Query: 212 DVFSFGVVILELIS 225
DV+SFGV + EL++
Sbjct: 197 DVWSFGVTLYELLT 210
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 87/194 (44%), Gaps = 26/194 (13%)
Query: 58 LGEGGFGPVFKGKLD-----DGREIAVKKLSHSSN-QGKKEFENEAKLLARVQHRNVVNL 111
LGEG FG V D G +AVK L Q + ++ E ++L + H ++V
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 112 LGYCAHGAEK--LLIYEYVINESL-DKVLFSLIKDIQILFRKKKT--------------- 153
G C EK L+ EYV SL D + + Q+L ++
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQHYIHR 135
Query: 154 DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNG--YMAPEYVMHGHLSVKA 211
+ A N+LLD+ + KI DFG+A+ PE + R G + + APE + +
Sbjct: 136 ALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYAS 195
Query: 212 DVFSFGVVILELIS 225
DV+SFGV + EL++
Sbjct: 196 DVWSFGVTLYELLT 209
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 95/195 (48%), Gaps = 31/195 (15%)
Query: 57 KLGEGGFG-PVFKGKLDDGREIAVKKL--SHSSNQGKKEFENEAKLLARVQHRNVVN--- 110
K+GEG FG + +DGR+ +K++ S S++ ++E E +LA ++H N+V
Sbjct: 31 KIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRE 90
Query: 111 ----------LLGYCAHG-------AEK-LLIYEYVINESLDKVLFSL--IKDIQILFRK 150
++ YC G A+K +L E I + ++ +L + D +IL R
Sbjct: 91 SFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHR- 149
Query: 151 KKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVK 210
DIK+ NI L ++ DFG+AR+ + GT Y++PE + + K
Sbjct: 150 ---DIKSQNIFLTKDGTVQLGDFGIARVL-NSTVELARACIGTPYYLSPEICENKPYNNK 205
Query: 211 ADVFSFGVVILELIS 225
+D+++ G V+ EL +
Sbjct: 206 SDIWALGCVLYELCT 220
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 126/287 (43%), Gaps = 67/287 (23%)
Query: 58 LGEGGFGPVF--------KGKLDDGREIAVKKL-SHSSNQGKKEFENEAKLLARV-QHRN 107
LGEG FG V K K + +AVK L ++ + + +E +++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 108 VVNLLGYCAHGAEKLLIYEYVINESLDKVL------------------------------ 137
++NLLG C +I EY +L + L
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 138 -FSLIKDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN 194
+ L + ++ L +K D+ A N+L+ + + KIADFG+AR D +++ TN
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKKTTN 218
Query: 195 G-----YMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLY 249
G +MAPE + + ++DV+SFGV++ E+ + + + V+ +KL
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE------LFKLL 272
Query: 250 KKDKSLEIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
K+ ++ ++ +++ M ++ C P RPT +++V
Sbjct: 273 KEGHRMD------KPANCTNELYMMMRD---CWHAVPSQRPTFKQLV 310
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 125/287 (43%), Gaps = 67/287 (23%)
Query: 58 LGEGGFGPVF--------KGKLDDGREIAVKKLSHSSNQGK-KEFENEAKLLARV-QHRN 107
LGEG FG V K K + +AVK L + + + +E +++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 108 VVNLLGYCAHGAEKLLIYEYVINESLDKVL------------------------------ 137
++NLLG C +I EY +L + L
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 138 -FSLIKDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN 194
+ L + ++ L +K D+ A N+L+ + + KIADFG+AR D +++ TN
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKNTTN 218
Query: 195 G-----YMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLY 249
G +MAPE + + ++DV+SFGV++ E+ + + + V+ +KL
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE------LFKLL 272
Query: 250 KKDKSLEIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
K+ ++ ++ +++ M ++ C P RPT +++V
Sbjct: 273 KEGHRMD------KPANCTNELYMMMRD---CWHAVPSQRPTFKQLV 310
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 90/211 (42%), Gaps = 44/211 (20%)
Query: 51 NFHPSNKLGEGGFGPVFKGKLD-DGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVV 109
+F +G GGFG VFK K DG+ +K++ +++ + E E K LA++ H N+V
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKA----EREVKALAKLDHVNIV 67
Query: 110 NLLG-----------------------------YCAHGAEKLLIYEYVINESLDKVLF-- 138
+ G +C G + I E E LDKVL
Sbjct: 68 HYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI-EKRRGEKLDKVLALE 126
Query: 139 ---SLIKDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGT 193
+ K + + KK D+K SNI L D KI DFG+ D R GT
Sbjct: 127 LFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR--XRSKGT 184
Query: 194 NGYMAPEYVMHGHLSVKADVFSFGVVILELI 224
YM+PE + + D+++ G+++ EL+
Sbjct: 185 LRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 88/194 (45%), Gaps = 26/194 (13%)
Query: 58 LGEGGFGPVFKGKLD-----DGREIAVKKL-SHSSNQGKKEFENEAKLLARVQHRNVVNL 111
LGEG FG V D G +AVK L + + Q + ++ E +L + H +++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 112 LGYC--AHGAEKLLIYEYVINESL-DKVLFSLIKDIQILFRKKKT--------------- 153
G C A A L+ EYV SL D + I Q+L ++
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHR 158
Query: 154 DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNG--YMAPEYVMHGHLSVKA 211
D+ A N+LLD+ + KI DFG+A+ PE R G + + APE + +
Sbjct: 159 DLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYAS 218
Query: 212 DVFSFGVVILELIS 225
DV+SFGV + EL++
Sbjct: 219 DVWSFGVTLYELLT 232
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 32/212 (15%)
Query: 43 EALVSATKNFHPSNKLGEGGFGPVFKGK--LDDGREIAVKKLSHSSNQGKKEFENEAKL- 99
+ L A + + ++GEG +G VFK + + GR +A+K++ + + ++
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA 63
Query: 100 ----LARVQHRNVVNLLGYCA-----HGAEKLLIYEYV---INESLDKV----------- 136
L +H NVV L C + L++E+V + LDKV
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK 123
Query: 137 --LFSLIKDIQILF--RKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAG 192
+F L++ + L R D+K NIL+ K+ADFG+AR++ T V
Sbjct: 124 DMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL--TSVVV 181
Query: 193 TNGYMAPEYVMHGHLSVKADVFSFGVVILELI 224
T Y APE ++ + D++S G + E+
Sbjct: 182 TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 52/216 (24%)
Query: 58 LGEGGFGPVF--------KGKLDDGREIAVKKLSHSSNQGK-KEFENEAKLLARV-QHRN 107
LGEG FG V K K + +AVK L + + + +E +++ + +H+N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 108 VVNLLGYCAHGAEKLLIYEYVINESLDKVL------------------------------ 137
++NLLG C +I EY +L + L
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 138 -FSLIKDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN 194
+ L + ++ L +K D+ A N+L+ + + KIADFG+AR D +++ TN
Sbjct: 209 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKKTTN 264
Query: 195 G-----YMAPEYVMHGHLSVKADVFSFGVVILELIS 225
G +MAPE + + ++DV+SFGV++ E+ +
Sbjct: 265 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 32/212 (15%)
Query: 43 EALVSATKNFHPSNKLGEGGFGPVFKGK--LDDGREIAVKKLSHSSNQGKKEFENEAKL- 99
+ L A + + ++GEG +G VFK + + GR +A+K++ + + ++
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA 63
Query: 100 ----LARVQHRNVVNLLGYCA-----HGAEKLLIYEYV---INESLDKV----------- 136
L +H NVV L C + L++E+V + LDKV
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK 123
Query: 137 --LFSLIKDIQILF--RKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAG 192
+F L++ + L R D+K NIL+ K+ADFG+AR++ T V
Sbjct: 124 DMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL--TSVVV 181
Query: 193 TNGYMAPEYVMHGHLSVKADVFSFGVVILELI 224
T Y APE ++ + D++S G + E+
Sbjct: 182 TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 52/216 (24%)
Query: 58 LGEGGFGPVF--------KGKLDDGREIAVKKLSHSSNQGK-KEFENEAKLLARV-QHRN 107
LGEG FG V K K + +AVK L + + + +E +++ + +H+N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 108 VVNLLGYCAHGAEKLLIYEYVINESLDKVL------------------------------ 137
++NLLG C +I EY +L + L
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 138 -FSLIKDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN 194
+ L + ++ L +K D+ A N+L+ + + KIADFG+AR D +++ TN
Sbjct: 150 TYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLAR----DINNIDYYKKTTN 205
Query: 195 G-----YMAPEYVMHGHLSVKADVFSFGVVILELIS 225
G +MAPE + + ++DV+SFGV++ E+ +
Sbjct: 206 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 32/212 (15%)
Query: 43 EALVSATKNFHPSNKLGEGGFGPVFKGK--LDDGREIAVKKLSHSSNQGKKEFENEAKL- 99
+ L A + + ++GEG +G VFK + + GR +A+K++ + + ++
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA 63
Query: 100 ----LARVQHRNVVNLLGYCA-----HGAEKLLIYEYV---INESLDKV----------- 136
L +H NVV L C + L++E+V + LDKV
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK 123
Query: 137 --LFSLIKDIQILF--RKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAG 192
+F L++ + L R D+K NIL+ K+ADFG+AR++ T V
Sbjct: 124 DMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL--TSVVV 181
Query: 193 TNGYMAPEYVMHGHLSVKADVFSFGVVILELI 224
T Y APE ++ + D++S G + E+
Sbjct: 182 TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 91/196 (46%), Gaps = 32/196 (16%)
Query: 58 LGEGGFGPVFKG-KLDDGREI----AVKKL-SHSSNQGKKEFENEAKLLARVQHRNVVNL 111
LG G FG V+KG + DG + A+K L ++S + KE +EA ++A V V L
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 112 LGYCAHGAEKLLIYEYVINESLDKVL---------------------FSLIKDIQILFRK 150
LG C +L+ LD V S ++D++++ R
Sbjct: 85 LGICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDVRLVHR- 143
Query: 151 KKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN-GYMAPEYVMHGHLSV 209
D+ A N+L+ KI DFG+ARL D+T + +MA E ++ +
Sbjct: 144 ---DLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTH 200
Query: 210 KADVFSFGVVILELIS 225
++DV+S+GV + EL++
Sbjct: 201 QSDVWSYGVTVWELMT 216
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 125/287 (43%), Gaps = 67/287 (23%)
Query: 58 LGEGGFGPVF--------KGKLDDGREIAVKKLSHSSNQGK-KEFENEAKLLARV-QHRN 107
LGEG FG V K K + +AVK L + + + +E +++ + +H+N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 108 VVNLLGYCAHGAEKLLIYEYVINESLDKVL------------------------------ 137
++NLLG C +I EY +L + L
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 138 -FSLIKDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN 194
+ L + ++ L +K D+ A N+L+ + + KIADFG+AR D +++ TN
Sbjct: 152 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKKTTN 207
Query: 195 G-----YMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLY 249
G +MAPE + + ++DV+SFGV++ E+ + + + V+ +KL
Sbjct: 208 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE------LFKLL 261
Query: 250 KKDKSLEIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
K+ ++ ++ +++ M ++ C P RPT +++V
Sbjct: 262 KEGHRMD------KPANCTNELYMMMRD---CWHAVPSQRPTFKQLV 299
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 98/205 (47%), Gaps = 28/205 (13%)
Query: 48 ATKN-FHPSNKLGEGGFGPVFKGKLD-DGREIAVKKLSHSSNQ---GKKEFENEAKLLAR 102
TKN F LG+GGFG V ++ G+ A KKL + G+ NE ++L +
Sbjct: 181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEK 240
Query: 103 VQHRNVVNLLGYCAHGAEKLLIYEYVIN----------------ESLDKVLFS--LIKDI 144
V R VV+L Y + L + ++N V ++ + +
Sbjct: 241 VNSRFVVSL-AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGL 299
Query: 145 QILFRKKKT--DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYV 202
+ L R++ D+K NILLDD +I+D G+A PE QT + RV GT GYMAPE V
Sbjct: 300 EDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GTVGYMAPEVV 357
Query: 203 MHGHLSVKADVFSFGVVILELISGQ 227
+ + D ++ G ++ E+I+GQ
Sbjct: 358 KNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 52/216 (24%)
Query: 58 LGEGGFGPVF--------KGKLDDGREIAVKKLSHSSNQGK-KEFENEAKLLARV-QHRN 107
LGEG FG V K K + +AVK L + + + +E +++ + +H+N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 108 VVNLLGYCAHGAEKLLIYEYVINESLDKVL------------------------------ 137
++NLLG C +I EY +L + L
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 138 -FSLIKDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN 194
+ L + ++ L +K D+ A N+L+ + + KIADFG+AR D +++ TN
Sbjct: 155 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKKTTN 210
Query: 195 G-----YMAPEYVMHGHLSVKADVFSFGVVILELIS 225
G +MAPE + + ++DV+SFGV++ E+ +
Sbjct: 211 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 100/211 (47%), Gaps = 26/211 (12%)
Query: 41 PFEALVSATKN--FHPSNKLGEGGFGPVFKG-KLDDGREI----AVKKLSHSSN-QGKKE 92
P +AL+ K F LG G FG V+KG + +G ++ A+K+L +++ + KE
Sbjct: 5 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 64
Query: 93 FENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKV---------------L 137
+EA ++A V + +V LLG C +L++ LD V
Sbjct: 65 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWC 124
Query: 138 FSLIKDIQILFRKKKT--DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN- 194
+ K + L ++ D+ A N+L+ KI DFG+A+L ++ +
Sbjct: 125 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 184
Query: 195 GYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
+MA E ++H + ++DV+S+GV + EL++
Sbjct: 185 KWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 88/194 (45%), Gaps = 26/194 (13%)
Query: 58 LGEGGFGPVFKGKLD-----DGREIAVKKL-SHSSNQGKKEFENEAKLLARVQHRNVVNL 111
LGEG FG V D G +AVK L + Q + ++ E +L + H +++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 112 LGYCAHGAEK--LLIYEYVINESL-DKVLFSLIKDIQILFRKKKT--------------- 153
G C EK L+ EYV SL D + I Q+L ++
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHR 141
Query: 154 DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNG--YMAPEYVMHGHLSVKA 211
++ A N+LLD+ + KI DFG+A+ PE + R G + + APE + +
Sbjct: 142 NLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYAS 201
Query: 212 DVFSFGVVILELIS 225
DV+SFGV + EL++
Sbjct: 202 DVWSFGVTLYELLT 215
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 98/205 (47%), Gaps = 28/205 (13%)
Query: 48 ATKN-FHPSNKLGEGGFGPVFKGKLD-DGREIAVKKLSHSSNQ---GKKEFENEAKLLAR 102
TKN F LG+GGFG V ++ G+ A KKL + G+ NE ++L +
Sbjct: 181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEK 240
Query: 103 VQHRNVVNLLGYCAHGAEKLLIYEYVIN----------------ESLDKVLFS--LIKDI 144
V R VV+L Y + L + ++N V ++ + +
Sbjct: 241 VNSRFVVSL-AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGL 299
Query: 145 QILFRKKKT--DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYV 202
+ L R++ D+K NILLDD +I+D G+A PE QT + RV GT GYMAPE V
Sbjct: 300 EDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GTVGYMAPEVV 357
Query: 203 MHGHLSVKADVFSFGVVILELISGQ 227
+ + D ++ G ++ E+I+GQ
Sbjct: 358 KNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 88/194 (45%), Gaps = 26/194 (13%)
Query: 58 LGEGGFGPVFKGKLD-----DGREIAVKKL-SHSSNQGKKEFENEAKLLARVQHRNVVNL 111
LGEG FG V D G +AVK L + Q + ++ E +L + H +++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 112 LGYCAHGAEK--LLIYEYVINESL-DKVLFSLIKDIQILFRKKKT--------------- 153
G C EK L+ EYV SL D + I Q+L ++
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHSQHYIHR 141
Query: 154 DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNG--YMAPEYVMHGHLSVKA 211
++ A N+LLD+ + KI DFG+A+ PE + R G + + APE + +
Sbjct: 142 NLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYAS 201
Query: 212 DVFSFGVVILELIS 225
DV+SFGV + EL++
Sbjct: 202 DVWSFGVTLYELLT 215
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 97/216 (44%), Gaps = 52/216 (24%)
Query: 58 LGEGGFGPVF--------KGKLDDGREIAVKKLSHSSNQGK-KEFENEAKLLARV-QHRN 107
LGEG FG V K K + +AVK L + + + +E +++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 108 VVNLLGYCAHGAEKLLIYEYVINESLDKVL------------------------------ 137
++NLLG C +I EY +L + L
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 138 -FSLIKDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN 194
+ L + ++ L +K D+ A N+L+ + + +IADFG+AR D +++ TN
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLAR----DINNIDYYKKTTN 218
Query: 195 G-----YMAPEYVMHGHLSVKADVFSFGVVILELIS 225
G +MAPE + + ++DV+SFGV++ E+ +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 52/216 (24%)
Query: 58 LGEGGFGPVF--------KGKLDDGREIAVKKLSHSSNQGK-KEFENEAKLLARV-QHRN 107
LGEG FG V K K + +AVK L + + + +E +++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 108 VVNLLGYCAHGAEKLLI----------------------YEYVIN---------ESLDKV 136
++NLLG C +I Y Y IN + L
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 137 LFSLIKDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN 194
+ L + ++ L +K D+ A N+L+ + + KIADFG+AR D +++ TN
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKKTTN 218
Query: 195 G-----YMAPEYVMHGHLSVKADVFSFGVVILELIS 225
G +MAPE + + ++DV+SFGV++ E+ +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 124/287 (43%), Gaps = 53/287 (18%)
Query: 40 FPFEALVSATKNFHPSNKLGEGGFGPVFKGKLDDGRE----IAVKKLSHSSNQGKKE-FE 94
P E +V+ H +G+G FG V+ G+ D + A+K LS + + E F
Sbjct: 16 IPHERVVT-----HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFL 70
Query: 95 NEAKLLARVQHRNVVNLLG--------------YCAHGAEKLLIYEYVINESL-DKVLFS 139
E L+ + H NV+ L+G Y HG I N ++ D + F
Sbjct: 71 REGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFG 130
Query: 140 L--IKDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMA-----RLFPEDQTHVNTRV 190
L + ++ L +K D+ A N +LD+ + K+ADFG+A R + Q H + R+
Sbjct: 131 LQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARL 190
Query: 191 AGTNGYMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLD-VDAQNLLDWAYKLY 249
+ A E + + K+DV+SFGV++ EL++ ++D D + L +L
Sbjct: 191 PVK--WTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLP 248
Query: 250 KKDKSLEIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
+ + DS Q+ C + DP +RPT R +V
Sbjct: 249 QPEY----------CPDS------LYQVMQQCWEADPAVRPTFRVLV 279
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 37/219 (16%)
Query: 32 IAAREQKHFPFEALVSATKNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKK 91
++++ QK + +A ++ KLG G FG V+ + ++AVK + S +
Sbjct: 164 MSSKPQKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVE 222
Query: 92 EFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVL-------------- 137
F EA ++ +QH +V L +I E++ SL L
Sbjct: 223 AFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLI 281
Query: 138 -FSLIKDIQILFRKKKT----DIKASNILLDDKWIPKIADFGMARL---FPEDQTHVNTR 189
FS + F +++ D++A+NIL+ + KIADFG+AR+ FP T
Sbjct: 282 DFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVGAKFPIKWT----- 336
Query: 190 VAGTNGYMAPEYVMHGHLSVKADVFSFGVVILELISGQR 228
APE + G ++K+DV+SFG++++E+++ R
Sbjct: 337 --------APEAINFGSFTIKSDVWSFGILLMEIVTYGR 367
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 125/287 (43%), Gaps = 67/287 (23%)
Query: 58 LGEGGFGPVF--------KGKLDDGREIAVKKLSHSSNQGK-KEFENEAKLLARV-QHRN 107
LGEG FG V K K + +AVK L + + + +E +++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 108 VVNLLGYCAHGAEKLLI----------------------YEYVIN---------ESLDKV 136
++NLLG C +I Y Y IN + L
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 137 LFSLIKDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN 194
+ L + ++ L +K D+ A N+L+ + + KIADFG+AR D +++ TN
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKKTTN 218
Query: 195 G-----YMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLY 249
G +MAPE + + ++DV+SFGV++ E+ + + + V+ +KL
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE------LFKLL 272
Query: 250 KKDKSLEIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
K+ ++ ++ +++ M ++ C P RPT +++V
Sbjct: 273 KEGHRMD------KPANCTNELYMMMRD---CWHAVPSQRPTFKQLV 310
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 50/211 (23%)
Query: 58 LGEGGFGPVFKGKLD-DGREI--AVKKL-SHSSNQGKKEFENEAKLLARV-QHRNVVNLL 112
+GEG FG V K ++ DG + A+K++ ++S ++F E ++L ++ H N++NLL
Sbjct: 33 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 92
Query: 113 GYCAHGAEKLLIYEYV----------------------INESLDKVLFS---------LI 141
G C H L EY I S L S +
Sbjct: 93 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 152
Query: 142 KDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNG---- 195
+ + L +K+ D+ A NIL+ + ++ KIADFG++R V T G
Sbjct: 153 RGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR-------GQEVYVKKTMGRLPV 205
Query: 196 -YMAPEYVMHGHLSVKADVFSFGVVILELIS 225
+MA E + + + +DV+S+GV++ E++S
Sbjct: 206 RWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 50/211 (23%)
Query: 58 LGEGGFGPVFKGKLD-DGREI--AVKKL-SHSSNQGKKEFENEAKLLARV-QHRNVVNLL 112
+GEG FG V K ++ DG + A+K++ ++S ++F E ++L ++ H N++NLL
Sbjct: 23 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 82
Query: 113 GYCAHGAEKLLIYEYV----------------------INESLDKVLFS---------LI 141
G C H L EY I S L S +
Sbjct: 83 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 142
Query: 142 KDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNG---- 195
+ + L +K+ D+ A NIL+ + ++ KIADFG++R V T G
Sbjct: 143 RGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR-------GQEVYVKKTMGRLPV 195
Query: 196 -YMAPEYVMHGHLSVKADVFSFGVVILELIS 225
+MA E + + + +DV+S+GV++ E++S
Sbjct: 196 RWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 105/215 (48%), Gaps = 34/215 (15%)
Query: 41 PFEALVSATKN--FHPSNKLGEGGFGPVFKG-KLDDGREI----AVKKLSHSSN-QGKKE 92
P +AL+ K F LG G FG V+KG + +G ++ A+K+L +++ + KE
Sbjct: 4 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 63
Query: 93 FENEAKLLARVQHRNVVNLLGYCAHGAEKLLIY--------------------EYVINES 132
+EA ++A V + +V LLG C +L++ +Y++N
Sbjct: 64 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC 123
Query: 133 LDKVL-FSLIKDIQILFRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVA 191
+ + ++D +++ R D+ A N+L+ KI DFG+A+L ++ +
Sbjct: 124 VQIAKGMNYLEDRRLVHR----DLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 192 GTN-GYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
+MA E ++H + ++DV+S+GV + EL++
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 94/191 (49%), Gaps = 25/191 (13%)
Query: 57 KLGEGGFGPVFKGK-LDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYC 115
+LG+G FG V+K K + G A K + S + +++ E ++LA H +V LLG
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 116 AHGAEKLLIYEYVINESLDKVLFSLIK-----DIQILFRKK-------------KTDIKA 157
H + ++ E+ ++D ++ L + IQ++ R+ D+KA
Sbjct: 78 YHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKA 137
Query: 158 SNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHL-----SVKAD 212
N+L+ + ++ADFG++ + ++ + GT +MAPE VM + KAD
Sbjct: 138 GNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI-GTPYWMAPEVVMCETMKDTPYDYKAD 196
Query: 213 VFSFGVVILEL 223
++S G+ ++E+
Sbjct: 197 IWSLGITLIEM 207
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 105/215 (48%), Gaps = 34/215 (15%)
Query: 41 PFEALVSATKN--FHPSNKLGEGGFGPVFKG-KLDDGREI----AVKKLSHSSN-QGKKE 92
P +AL+ K F LG G FG V+KG + +G ++ A+K+L +++ + KE
Sbjct: 6 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 65
Query: 93 FENEAKLLARVQHRNVVNLLGYCAHGAEKLLIY--------------------EYVINES 132
+EA ++A V + +V LLG C +L++ +Y++N
Sbjct: 66 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC 125
Query: 133 LDKVL-FSLIKDIQILFRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVA 191
+ + ++D +++ R D+ A N+L+ KI DFG+A+L ++ +
Sbjct: 126 VQIAKGMNYLEDRRLVHR----DLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 181
Query: 192 GTN-GYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
+MA E ++H + ++DV+S+GV + EL++
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 105/215 (48%), Gaps = 34/215 (15%)
Query: 41 PFEALVSATKN--FHPSNKLGEGGFGPVFKG-KLDDGREI----AVKKLSHSSN-QGKKE 92
P +AL+ K F LG G FG V+KG + +G ++ A+K+L +++ + KE
Sbjct: 7 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 66
Query: 93 FENEAKLLARVQHRNVVNLLGYCAHGAEKLLIY--------------------EYVINES 132
+EA ++A V + +V LLG C +L++ +Y++N
Sbjct: 67 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC 126
Query: 133 LDKVL-FSLIKDIQILFRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVA 191
+ + ++D +++ R D+ A N+L+ KI DFG+A+L ++ +
Sbjct: 127 VQIAKGMNYLEDRRLVHR----DLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 192 GTN-GYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
+MA E ++H + ++DV+S+GV + EL++
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 94/191 (49%), Gaps = 25/191 (13%)
Query: 57 KLGEGGFGPVFKGK-LDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYC 115
+LG+G FG V+K K + G A K + S + +++ E ++LA H +V LLG
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 116 AHGAEKLLIYEYVINESLDKVLFSLIK-----DIQILFRKK-------------KTDIKA 157
H + ++ E+ ++D ++ L + IQ++ R+ D+KA
Sbjct: 86 YHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKA 145
Query: 158 SNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHL-----SVKAD 212
N+L+ + ++ADFG++ + ++ + GT +MAPE VM + KAD
Sbjct: 146 GNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI-GTPYWMAPEVVMCETMKDTPYDYKAD 204
Query: 213 VFSFGVVILEL 223
++S G+ ++E+
Sbjct: 205 IWSLGITLIEM 215
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 105/215 (48%), Gaps = 34/215 (15%)
Query: 41 PFEALVSATKN--FHPSNKLGEGGFGPVFKG-KLDDGREI----AVKKLSHSSN-QGKKE 92
P +AL+ K F LG G FG V+KG + +G ++ A+K+L +++ + KE
Sbjct: 8 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 67
Query: 93 FENEAKLLARVQHRNVVNLLGYCAHGAEKLLIY--------------------EYVINES 132
+EA ++A V + +V LLG C +L++ +Y++N
Sbjct: 68 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC 127
Query: 133 LDKVL-FSLIKDIQILFRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVA 191
+ + ++D +++ R D+ A N+L+ KI DFG+A+L ++ +
Sbjct: 128 VQIAKGMNYLEDRRLVHR----DLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 183
Query: 192 GTN-GYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
+MA E ++H + ++DV+S+GV + EL++
Sbjct: 184 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 105/215 (48%), Gaps = 34/215 (15%)
Query: 41 PFEALVSATKN--FHPSNKLGEGGFGPVFKG-KLDDGREI----AVKKLSHSSN-QGKKE 92
P +AL+ K F LG G FG V+KG + +G ++ A+K+L +++ + KE
Sbjct: 5 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 64
Query: 93 FENEAKLLARVQHRNVVNLLGYCAHGAEKLLIY--------------------EYVINES 132
+EA ++A V + +V LLG C +L++ +Y++N
Sbjct: 65 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC 124
Query: 133 LDKVL-FSLIKDIQILFRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVA 191
+ + ++D +++ R D+ A N+L+ KI DFG+A+L ++ +
Sbjct: 125 VQIAKGMNYLEDRRLVHR----DLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 180
Query: 192 GTN-GYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
+MA E ++H + ++DV+S+GV + EL++
Sbjct: 181 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 121/301 (40%), Gaps = 45/301 (14%)
Query: 17 LGSSREGDNEEDLEKIAAREQKHFPFEALVSATKNFHPSNKLGEGGFGPVFKGKLDDGRE 76
L S+ E + EE+L A +QK+ + A ++F LG+G FG V+ + +
Sbjct: 5 LPSAPENNPEEEL----ASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKF 60
Query: 77 IAVKKLSHSSNQGKKEFEN----EAKLLARVQHRNVVNLLGYCAHGAEKLLIYEY----V 128
I K+ + K E+ E ++ + ++H N++ L GY LI EY
Sbjct: 61 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 120
Query: 129 INESLDKV-----------LFSLIKDIQILFRKK--KTDIKASNILLDDKWIPKIADFGM 175
+ L K+ + L + K+ DIK N+LL KIADFG
Sbjct: 121 VYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW 180
Query: 176 ARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLD 235
+ P + T + GT Y+ PE + K D++S GV+ E + G+ N
Sbjct: 181 SVHAPSSR---RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 237
Query: 236 VDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRV 295
+ YK+ +E P + D I+ + + +P RP +R V
Sbjct: 238 QET----------YKRISRVEFTFPDFVTEGARDLISRLL-------KHNPSQRPMLREV 280
Query: 296 V 296
+
Sbjct: 281 L 281
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 104/215 (48%), Gaps = 34/215 (15%)
Query: 41 PFEALVSATKN--FHPSNKLGEGGFGPVFKG-KLDDGREI----AVKKLSHSSN-QGKKE 92
P +AL+ K F LG G FG V+KG + +G ++ A+K+L +++ + KE
Sbjct: 14 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 73
Query: 93 FENEAKLLARVQHRNVVNLLGYCAHGAEKLLIY--------------------EYVINES 132
+EA ++A V + +V LLG C +L+ +Y++N
Sbjct: 74 ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC 133
Query: 133 LDKVL-FSLIKDIQILFRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVA 191
+ + ++D +++ R D+ A N+L+ KI DFG+A+L ++ +
Sbjct: 134 VQIAKGMNYLEDRRLVHR----DLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 189
Query: 192 GTN-GYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
+MA E ++H + ++DV+S+GV + EL++
Sbjct: 190 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 88/203 (43%), Gaps = 33/203 (16%)
Query: 57 KLGEGGFGPVFKG-KLDDGREIAVKKLSHS-SNQGKKEFENEAKLLARVQHRNVVNL--- 111
+LG GGFG V + D G ++A+K+ S + ++ + E +++ ++ H NVV+
Sbjct: 22 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREV 81
Query: 112 ---LGYCAHGAEKLLIYEYVINESLDKVL--------------FSLIKDIQILFRKKKT- 153
L A LL EY L K L +L+ DI R
Sbjct: 82 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN 141
Query: 154 -----DIKASNILLD---DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHG 205
D+K NI+L + I KI D G A+ DQ + T GT Y+APE +
Sbjct: 142 RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQYLAPELLEQK 199
Query: 206 HLSVKADVFSFGVVILELISGQR 228
+V D +SFG + E I+G R
Sbjct: 200 KYTVTVDYWSFGTLAFECITGFR 222
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 26/211 (12%)
Query: 41 PFEALVSATKN--FHPSNKLGEGGFGPVFKG-KLDDGREI----AVKKLSHSSN-QGKKE 92
P +AL+ K F LG G FG V+KG + +G ++ A+K+L +++ + KE
Sbjct: 4 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 63
Query: 93 FENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKV---------------L 137
+EA ++A V + +V LLG C +L+ LD V
Sbjct: 64 ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWC 123
Query: 138 FSLIKDIQILFRKKKT--DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN- 194
+ K + L ++ D+ A N+L+ KI DFG+A+L ++ +
Sbjct: 124 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 195 GYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
+MA E ++H + ++DV+S+GV + EL++
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 104/215 (48%), Gaps = 34/215 (15%)
Query: 41 PFEALVSATKN--FHPSNKLGEGGFGPVFKG-KLDDGREI----AVKKLSHSSN-QGKKE 92
P +AL+ K F LG G FG V+KG + +G ++ A+K+L +++ + KE
Sbjct: 4 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 63
Query: 93 FENEAKLLARVQHRNVVNLLGYCAHGAEKLLIY--------------------EYVINES 132
+EA ++A V + +V LLG C +L+ +Y++N
Sbjct: 64 ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC 123
Query: 133 LDKVL-FSLIKDIQILFRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVA 191
+ + ++D +++ R D+ A N+L+ KI DFG+A+L ++ +
Sbjct: 124 VQIAKGMNYLEDRRLVHR----DLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 192 GTN-GYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
+MA E ++H + ++DV+S+GV + EL++
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 104/215 (48%), Gaps = 34/215 (15%)
Query: 41 PFEALVSATKN--FHPSNKLGEGGFGPVFKG-KLDDGREI----AVKKLSHSSN-QGKKE 92
P +AL+ K F LG G FG V+KG + +G ++ A+K+L +++ + KE
Sbjct: 29 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 88
Query: 93 FENEAKLLARVQHRNVVNLLGYCAHGAEKLLIY--------------------EYVINES 132
+EA ++A V + +V LLG C +L+ +Y++N
Sbjct: 89 ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC 148
Query: 133 LDKVL-FSLIKDIQILFRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVA 191
+ + ++D +++ R D+ A N+L+ KI DFG+A+L ++ +
Sbjct: 149 VQIAKGMNYLEDRRLVHR----DLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 204
Query: 192 GTN-GYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
+MA E ++H + ++DV+S+GV + EL++
Sbjct: 205 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 88/203 (43%), Gaps = 33/203 (16%)
Query: 57 KLGEGGFGPVFKG-KLDDGREIAVKKLSHS-SNQGKKEFENEAKLLARVQHRNVVNL--- 111
+LG GGFG V + D G ++A+K+ S + ++ + E +++ ++ H NVV+
Sbjct: 21 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREV 80
Query: 112 ---LGYCAHGAEKLLIYEYVINESLDKVL--------------FSLIKDIQILFRKKKT- 153
L A LL EY L K L +L+ DI R
Sbjct: 81 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN 140
Query: 154 -----DIKASNILLD---DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHG 205
D+K NI+L + I KI D G A+ DQ + T GT Y+APE +
Sbjct: 141 RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQYLAPELLEQK 198
Query: 206 HLSVKADVFSFGVVILELISGQR 228
+V D +SFG + E I+G R
Sbjct: 199 KYTVTVDYWSFGTLAFECITGFR 221
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 104/215 (48%), Gaps = 34/215 (15%)
Query: 41 PFEALVSATKN--FHPSNKLGEGGFGPVFKG-KLDDGREI----AVKKLSHSSN-QGKKE 92
P +AL+ K F LG G FG V+KG + +G ++ A+K+L +++ + KE
Sbjct: 7 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 66
Query: 93 FENEAKLLARVQHRNVVNLLGYCAHGAEKLLIY--------------------EYVINES 132
+EA ++A V + +V LLG C +L+ +Y++N
Sbjct: 67 ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC 126
Query: 133 LDKVL-FSLIKDIQILFRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVA 191
+ + ++D +++ R D+ A N+L+ KI DFG+A+L ++ +
Sbjct: 127 VQIAKGMNYLEDRRLVHR----DLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 192 GTN-GYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
+MA E ++H + ++DV+S+GV + EL++
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 104/215 (48%), Gaps = 34/215 (15%)
Query: 41 PFEALVSATKN--FHPSNKLGEGGFGPVFKG-KLDDGREI----AVKKLSHSSN-QGKKE 92
P +AL+ K F LG G FG V+KG + +G ++ A+K+L +++ + KE
Sbjct: 7 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 66
Query: 93 FENEAKLLARVQHRNVVNLLGYCAHGAEKLLIY--------------------EYVINES 132
+EA ++A V + +V LLG C +L+ +Y++N
Sbjct: 67 ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC 126
Query: 133 LDKVL-FSLIKDIQILFRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVA 191
+ + ++D +++ R D+ A N+L+ KI DFG+A+L ++ +
Sbjct: 127 VQIAKGMNYLEDRRLVHR----DLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 192 GTN-GYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
+MA E ++H + ++DV+S+GV + EL++
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 104/215 (48%), Gaps = 34/215 (15%)
Query: 41 PFEALVSATKN--FHPSNKLGEGGFGPVFKG-KLDDGREI----AVKKLSHSSN-QGKKE 92
P +AL+ K F LG G FG V+KG + +G ++ A+K+L +++ + KE
Sbjct: 10 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 69
Query: 93 FENEAKLLARVQHRNVVNLLGYCAHGAEKLLIY--------------------EYVINES 132
+EA ++A V + +V LLG C +L+ +Y++N
Sbjct: 70 ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC 129
Query: 133 LDKVL-FSLIKDIQILFRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVA 191
+ + ++D +++ R D+ A N+L+ KI DFG+A+L ++ +
Sbjct: 130 VQIAKGMNYLEDRRLVHR----DLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 185
Query: 192 GTN-GYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
+MA E ++H + ++DV+S+GV + EL++
Sbjct: 186 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 89/188 (47%), Gaps = 18/188 (9%)
Query: 57 KLGEGGFGPVFKGKL-DDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYC 115
K+GEG G V + G+ +AVKK+ Q ++ NE ++ QH NVV +
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 116 AHGAEKLLIYEYV-------------IN-ESLDKVLFSLIKDIQILFRKK--KTDIKASN 159
G E ++ E++ +N E + V ++++ + +L + DIK+ +
Sbjct: 218 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS 277
Query: 160 ILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVV 219
ILL K++DFG ++ + GT +MAPE + + D++S G++
Sbjct: 278 ILLTHDGRVKLSDFGFCAQVSKEVPR-RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIM 336
Query: 220 ILELISGQ 227
++E++ G+
Sbjct: 337 VIEMVDGE 344
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 111/271 (40%), Gaps = 41/271 (15%)
Query: 51 NFHPSNKLGEGGFGPVFKGK-LDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQHR 106
NF K+G G F V++ L DG +A+KK+ + + + E LL ++ H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 107 NVVNLLGYCAHGAEKLLIYEYVINESLDKVLFSLIKDIQIL------------------- 147
NV+ E ++ E L +++ K +++
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 148 --FRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHG 205
R DIK +N+ + + K+ D G+ R F T ++ V GT YM+PE +
Sbjct: 153 HSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV-GTPYYMSPERIHEN 211
Query: 206 HLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVD-PSLAA 264
+ K+D++S G ++ E+ + Q S F D LY K +E D P L +
Sbjct: 212 GYNFKSDIWSLGCLLYEMAALQ--SPFYGD---------KMNLYSLCKKIEQCDYPPLPS 260
Query: 265 SDSGDQIAMCIQIGLLCTQGDPQLRPTMRRV 295
+++ Q+ +C DP+ RP + V
Sbjct: 261 DHYSEELR---QLVNMCINPDPEKRPDVTYV 288
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 104/215 (48%), Gaps = 34/215 (15%)
Query: 41 PFEALVSATKN--FHPSNKLGEGGFGPVFKG-KLDDGREI----AVKKLSHSSN-QGKKE 92
P +AL+ K F LG G FG V+KG + +G ++ A+K+L +++ + KE
Sbjct: 4 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 63
Query: 93 FENEAKLLARVQHRNVVNLLGYCAHGAEKLLIY--------------------EYVINES 132
+EA ++A V + +V LLG C +L+ +Y++N
Sbjct: 64 ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC 123
Query: 133 LDKVL-FSLIKDIQILFRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVA 191
+ + ++D +++ R D+ A N+L+ KI DFG+A+L ++ +
Sbjct: 124 VQIAKGMNYLEDRRLVHR----DLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 192 GTN-GYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
+MA E ++H + ++DV+S+GV + EL++
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 104/215 (48%), Gaps = 34/215 (15%)
Query: 41 PFEALVSATKN--FHPSNKLGEGGFGPVFKG-KLDDGREI----AVKKLSHSSN-QGKKE 92
P +AL+ K F LG G FG V+KG + +G ++ A+K+L +++ + KE
Sbjct: 7 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 66
Query: 93 FENEAKLLARVQHRNVVNLLGYCAHGAEKLLIY--------------------EYVINES 132
+EA ++A V + +V LLG C +L+ +Y++N
Sbjct: 67 ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC 126
Query: 133 LDKVL-FSLIKDIQILFRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVA 191
+ + ++D +++ R D+ A N+L+ KI DFG+A+L ++ +
Sbjct: 127 VQIAKGMNYLEDRRLVHR----DLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 192 GTN-GYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
+MA E ++H + ++DV+S+GV + EL++
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 104/215 (48%), Gaps = 34/215 (15%)
Query: 41 PFEALVSATKN--FHPSNKLGEGGFGPVFKG-KLDDGREI----AVKKLSHSSN-QGKKE 92
P +AL+ K F LG G FG V+KG + +G ++ A+K+L +++ + KE
Sbjct: 11 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 70
Query: 93 FENEAKLLARVQHRNVVNLLGYCAHGAEKLLIY--------------------EYVINES 132
+EA ++A V + +V LLG C +L+ +Y++N
Sbjct: 71 ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC 130
Query: 133 LDKVL-FSLIKDIQILFRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVA 191
+ + ++D +++ R D+ A N+L+ KI DFG+A+L ++ +
Sbjct: 131 VQIAKGMNYLEDRRLVHR----DLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 186
Query: 192 GTN-GYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
+MA E ++H + ++DV+S+GV + EL++
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 104/215 (48%), Gaps = 34/215 (15%)
Query: 41 PFEALVSATKN--FHPSNKLGEGGFGPVFKG-KLDDGREI----AVKKLSHSSN-QGKKE 92
P +AL+ K F LG G FG V+KG + +G ++ A+K+L +++ + KE
Sbjct: 6 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 65
Query: 93 FENEAKLLARVQHRNVVNLLGYCAHGAEKLLIY--------------------EYVINES 132
+EA ++A V + +V LLG C +L+ +Y++N
Sbjct: 66 ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC 125
Query: 133 LDKVL-FSLIKDIQILFRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVA 191
+ + ++D +++ R D+ A N+L+ KI DFG+A+L ++ +
Sbjct: 126 VQIAKGMNYLEDRRLVHR----DLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 181
Query: 192 GTN-GYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
+MA E ++H + ++DV+S+GV + EL++
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 125/287 (43%), Gaps = 67/287 (23%)
Query: 58 LGEGGFGPVF--------KGKLDDGREIAVKKLSHSSNQGK-KEFENEAKLLARV-QHRN 107
LGEG FG V K K + +AVK L + + + +E +++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 108 VVNLLGYCAHGAEKLLIYEYVINESLDKVL------------------------------ 137
+++LLG C +I EY +L + L
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 138 -FSLIKDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN 194
+ L + ++ L +K D+ A N+L+ + + KIADFG+AR D +++ TN
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKKTTN 218
Query: 195 G-----YMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLY 249
G +MAPE + + ++DV+SFGV++ E+ + + + V+ +KL
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE------LFKLL 272
Query: 250 KKDKSLEIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
K+ ++ ++ +++ M ++ C P RPT +++V
Sbjct: 273 KEGHRMD------KPANCTNELYMMMRD---CWHAVPSQRPTFKQLV 310
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 96/216 (44%), Gaps = 52/216 (24%)
Query: 58 LGEGGFGPVF--------KGKLDDGREIAVKKLSHSSNQGK-KEFENEAKLLARV-QHRN 107
LGEG FG V K K + +AVK L + + + +E +++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 108 VVNLLGYCAHGAEKLLIYEYVINESLDKVL------------------------------ 137
++ LLG C +I EY +L + L
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 138 -FSLIKDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN 194
+ L + ++ L +K D+ A N+L+ + + KIADFG+AR D +++ TN
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKKTTN 218
Query: 195 G-----YMAPEYVMHGHLSVKADVFSFGVVILELIS 225
G +MAPE + + ++DV+SFGV++ E+ +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 89/188 (47%), Gaps = 18/188 (9%)
Query: 57 KLGEGGFGPVFKGKL-DDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYC 115
K+GEG G V + G+ +AVKK+ Q ++ NE ++ QH NVV +
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 97
Query: 116 AHGAEKLLIYEYV-------------IN-ESLDKVLFSLIKDIQILFRKK--KTDIKASN 159
G E ++ E++ +N E + V ++++ + +L + DIK+ +
Sbjct: 98 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS 157
Query: 160 ILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVV 219
ILL K++DFG ++ + GT +MAPE + + D++S G++
Sbjct: 158 ILLTHDGRVKLSDFGFCAQVSKEVPR-RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIM 216
Query: 220 ILELISGQ 227
++E++ G+
Sbjct: 217 VIEMVDGE 224
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 31/227 (13%)
Query: 29 LEKIAAREQKHFPFEALVSATK--------NFHPSNKLGEGGFGPVFKGKLDDGREIAVK 80
LE++ EQ+ EA ++ + +F ++LG G G VFK + +
Sbjct: 4 LEELELDEQQRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMAR 63
Query: 81 KLSHSSNQG--KKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVL- 137
KL H + + + E ++L +V G E + E++ SLD+VL
Sbjct: 64 KLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK 123
Query: 138 --------------FSLIKDIQILFRKKKT---DIKASNILLDDKWIPKIADFGMARLFP 180
++IK + L K K D+K SNIL++ + K+ DFG++
Sbjct: 124 KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 183
Query: 181 EDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVVILELISGQ 227
+ + GT YM+PE + H SV++D++S G+ ++E+ G+
Sbjct: 184 DSMAN---SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 104/215 (48%), Gaps = 34/215 (15%)
Query: 41 PFEALVSATKN--FHPSNKLGEGGFGPVFKG-KLDDGREI----AVKKLSHSSN-QGKKE 92
P +AL+ K F LG G FG V+KG + +G ++ A+K+L +++ + KE
Sbjct: 6 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 65
Query: 93 FENEAKLLARVQHRNVVNLLGYCAHGAEKLLIY--------------------EYVINES 132
+EA ++A V + +V LLG C +L++ +Y++N
Sbjct: 66 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC 125
Query: 133 LDKVL-FSLIKDIQILFRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVA 191
+ + ++D +++ R D+ A N+L+ KI DFG A+L ++ +
Sbjct: 126 VQIAKGMNYLEDRRLVHR----DLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 181
Query: 192 GTN-GYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
+MA E ++H + ++DV+S+GV + EL++
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 89/188 (47%), Gaps = 18/188 (9%)
Query: 57 KLGEGGFGPVFKGKL-DDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYC 115
K+GEG G V + G+ +AVKK+ Q ++ NE ++ QH NVV +
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 140
Query: 116 AHGAEKLLIYEYV-------------IN-ESLDKVLFSLIKDIQILFRKK--KTDIKASN 159
G E ++ E++ +N E + V ++++ + +L + DIK+ +
Sbjct: 141 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS 200
Query: 160 ILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVV 219
ILL K++DFG ++ + GT +MAPE + + D++S G++
Sbjct: 201 ILLTHDGRVKLSDFGFCAQVSKEVPR-RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIM 259
Query: 220 ILELISGQ 227
++E++ G+
Sbjct: 260 VIEMVDGE 267
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 89/188 (47%), Gaps = 18/188 (9%)
Query: 57 KLGEGGFGPVFKGKL-DDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYC 115
K+GEG G V + G+ +AVKK+ Q ++ NE ++ QH NVV +
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 116 AHGAEKLLIYEYV-------------IN-ESLDKVLFSLIKDIQILFRKK--KTDIKASN 159
G E ++ E++ +N E + V ++++ + +L + DIK+ +
Sbjct: 96 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS 155
Query: 160 ILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVV 219
ILL K++DFG ++ + GT +MAPE + + D++S G++
Sbjct: 156 ILLTHDGRVKLSDFGFCAQVSKEVPR-RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIM 214
Query: 220 ILELISGQ 227
++E++ G+
Sbjct: 215 VIEMVDGE 222
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 104/215 (48%), Gaps = 34/215 (15%)
Query: 41 PFEALVSATKN--FHPSNKLGEGGFGPVFKG-KLDDGREI----AVKKLSHSSN-QGKKE 92
P +AL+ K F LG G FG V+KG + +G ++ A+K+L +++ + KE
Sbjct: 6 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 65
Query: 93 FENEAKLLARVQHRNVVNLLGYCAHGAEKLLIY--------------------EYVINES 132
+EA ++A V + +V LLG C +L++ +Y++N
Sbjct: 66 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC 125
Query: 133 LDKVL-FSLIKDIQILFRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVA 191
+ + ++D +++ R D+ A N+L+ KI DFG A+L ++ +
Sbjct: 126 VQIAKGMNYLEDRRLVHR----DLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 181
Query: 192 GTN-GYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
+MA E ++H + ++DV+S+GV + EL++
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 104/215 (48%), Gaps = 34/215 (15%)
Query: 41 PFEALVSATKN--FHPSNKLGEGGFGPVFKG-KLDDGREI----AVKKLSHSSN-QGKKE 92
P +AL+ K F LG G FG V+KG + +G ++ A+K+L +++ + KE
Sbjct: 8 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 67
Query: 93 FENEAKLLARVQHRNVVNLLGYCAHGAEKLLIY--------------------EYVINES 132
+EA ++A V + +V LLG C +L++ +Y++N
Sbjct: 68 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC 127
Query: 133 LDKVL-FSLIKDIQILFRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVA 191
+ + ++D +++ R D+ A N+L+ KI DFG A+L ++ +
Sbjct: 128 VQIAKGMNYLEDRRLVHR----DLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 183
Query: 192 GTN-GYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
+MA E ++H + ++DV+S+GV + EL++
Sbjct: 184 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 89/188 (47%), Gaps = 18/188 (9%)
Query: 57 KLGEGGFGPVFKGKL-DDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYC 115
K+GEG G V + G+ +AVKK+ Q ++ NE ++ QH NVV +
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 116 AHGAEKLLIYEYV-------------IN-ESLDKVLFSLIKDIQILFRKK--KTDIKASN 159
G E ++ E++ +N E + V ++++ + +L + DIK+ +
Sbjct: 91 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS 150
Query: 160 ILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVV 219
ILL K++DFG ++ + GT +MAPE + + D++S G++
Sbjct: 151 ILLTHDGRVKLSDFGFCAQVSKEVPR-RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIM 209
Query: 220 ILELISGQ 227
++E++ G+
Sbjct: 210 VIEMVDGE 217
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 89/188 (47%), Gaps = 18/188 (9%)
Query: 57 KLGEGGFGPVFKGKL-DDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYC 115
K+GEG G V + G+ +AVKK+ Q ++ NE ++ QH NVV +
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 116 AHGAEKLLIYEYV-------------IN-ESLDKVLFSLIKDIQILFRKK--KTDIKASN 159
G E ++ E++ +N E + V ++++ + +L + DIK+ +
Sbjct: 87 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS 146
Query: 160 ILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVV 219
ILL K++DFG ++ + GT +MAPE + + D++S G++
Sbjct: 147 ILLTHDGRVKLSDFGFCAQVSKEVPR-RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIM 205
Query: 220 ILELISGQ 227
++E++ G+
Sbjct: 206 VIEMVDGE 213
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 89/188 (47%), Gaps = 18/188 (9%)
Query: 57 KLGEGGFGPV-FKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYC 115
K+GEG G V + G+++AVKK+ Q ++ NE ++ H NVV++
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 116 AHGAEKLLIYEYV-------------INE-SLDKVLFSLIKDIQILFRKK--KTDIKASN 159
G E ++ E++ +NE + V S+++ + L + DIK+ +
Sbjct: 112 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDS 171
Query: 160 ILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVV 219
ILL K++DFG ++ + GT +MAPE + + D++S G++
Sbjct: 172 ILLTSDGRIKLSDFGFCAQVSKEVPK-RKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIM 230
Query: 220 ILELISGQ 227
++E+I G+
Sbjct: 231 VIEMIDGE 238
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 94/195 (48%), Gaps = 29/195 (14%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLS-HSSNQGKKEFE-NEAKLLARVQHRNVVNLLGY 114
K+GEG +G V+K K GR +A+K++ + ++G E LL + H N+V+L+
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 115 CAHGAEKLLIYEYV---INESLDK------------VLFSLIKDI------QILFRKKKT 153
L++E++ + + LD+ L+ L++ + +IL R
Sbjct: 88 IHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHR---- 143
Query: 154 DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHG-HLSVKAD 212
D+K N+L++ K+ADFG+AR F V T Y AP+ +M S D
Sbjct: 144 DLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGSKKYSTSVD 202
Query: 213 VFSFGVVILELISGQ 227
++S G + E+I+G+
Sbjct: 203 IWSIGCIFAEMITGK 217
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 97/211 (45%), Gaps = 50/211 (23%)
Query: 58 LGEGGFGPVFKGKLD-DGREI--AVKKL-SHSSNQGKKEFENEAKLLARV-QHRNVVNLL 112
+GEG FG V K ++ DG + A+K++ ++S ++F E ++L ++ H N++NLL
Sbjct: 30 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 89
Query: 113 GYCAHGAEKLLIYEYV----------------------INESLDKVLFS---------LI 141
G C H L EY I S L S +
Sbjct: 90 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 149
Query: 142 KDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNG---- 195
+ + L +K+ ++ A NIL+ + ++ KIADFG++R V T G
Sbjct: 150 RGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSR-------GQEVYVKKTMGRLPV 202
Query: 196 -YMAPEYVMHGHLSVKADVFSFGVVILELIS 225
+MA E + + + +DV+S+GV++ E++S
Sbjct: 203 RWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 94/195 (48%), Gaps = 29/195 (14%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLS-HSSNQGKKEFE-NEAKLLARVQHRNVVNLLGY 114
K+GEG +G V+K K GR +A+K++ + ++G E LL + H N+V+L+
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 115 CAHGAEKLLIYEYV---INESLDK------------VLFSLIKDI------QILFRKKKT 153
L++E++ + + LD+ L+ L++ + +IL R
Sbjct: 88 IHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHR---- 143
Query: 154 DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHG-HLSVKAD 212
D+K N+L++ K+ADFG+AR F V T Y AP+ +M S D
Sbjct: 144 DLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGSKKYSTSVD 202
Query: 213 VFSFGVVILELISGQ 227
++S G + E+I+G+
Sbjct: 203 IWSIGCIFAEMITGK 217
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 124/307 (40%), Gaps = 65/307 (21%)
Query: 48 ATKNFHPSNKLGEGGFGPV-FKGKLDDGREIAVKKLSHSSNQGKKEFE---NEAKLLARV 103
+ ++F LG G FG V +GR A+K L K+ E +E +L+ V
Sbjct: 4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV 63
Query: 104 QHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFSLIKDIQ------------------ 145
H ++ + G + +I +Y+ L FSL++ Q
Sbjct: 64 THPFIIRMWGTFQDAQQIFMIMDYIEGGEL----FSLLRKSQRFPNPVAKFYAAEVCLAL 119
Query: 146 -------ILFRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMA 198
I++R D+K NILLD KI DFG A+ P+ V + GT Y+A
Sbjct: 120 EYLHSKDIIYR----DLKPENILLDKNGHIKITDFGFAKYVPD----VTYXLCGTPDYIA 171
Query: 199 PEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIV 258
PE V + D +SFG++I E+++G + D+ + K Y+K + E+
Sbjct: 172 PEVVSTKPYNKSIDWWSFGILIYEMLAG-----YTPFYDSNTM-----KTYEKILNAELR 221
Query: 259 DPSLAASDSGDQIAMCIQIGLLCTQG-------DPQLRPTMRRVVV--MLSKKPGPGNLE 309
P D D ++ I L G D + P + VV +LS+ N+E
Sbjct: 222 FPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSR-----NIE 276
Query: 310 EPTRPGV 316
P P +
Sbjct: 277 TPYEPPI 283
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 103/215 (47%), Gaps = 34/215 (15%)
Query: 41 PFEALVSATKN--FHPSNKLGEGGFGPVFKG-KLDDGREI----AVKKLSHSSN-QGKKE 92
P +AL+ K F LG G FG V+KG + +G ++ A+K+L +++ + KE
Sbjct: 6 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 65
Query: 93 FENEAKLLARVQHRNVVNLLGYCAHGAEKLLIY--------------------EYVINES 132
+EA ++A V + +V LLG C +L+ +Y++N
Sbjct: 66 ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC 125
Query: 133 LDKVL-FSLIKDIQILFRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVA 191
+ + ++D +++ R D+ A N+L+ KI DFG A+L ++ +
Sbjct: 126 VQIAKGMNYLEDRRLVHR----DLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 181
Query: 192 GTN-GYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
+MA E ++H + ++DV+S+GV + EL++
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 103/215 (47%), Gaps = 34/215 (15%)
Query: 41 PFEALVSATKN--FHPSNKLGEGGFGPVFKG-KLDDGREI----AVKKLSHSSN-QGKKE 92
P +AL+ K F LG G FG V+KG + +G ++ A+K+L +++ + KE
Sbjct: 4 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 63
Query: 93 FENEAKLLARVQHRNVVNLLGYCAHGAEKLLIY--------------------EYVINES 132
+EA ++A V + +V LLG C +L+ +Y++N
Sbjct: 64 ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC 123
Query: 133 LDKVL-FSLIKDIQILFRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVA 191
+ + ++D +++ R D+ A N+L+ KI DFG A+L ++ +
Sbjct: 124 VQIAKGMNYLEDRRLVHR----DLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 179
Query: 192 GTN-GYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
+MA E ++H + ++DV+S+GV + EL++
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 96/198 (48%), Gaps = 30/198 (15%)
Query: 57 KLGEGGFGPVFKGK-----LDDGREIAVKKLSHSSNQG--KKEFENEAKLLARVQHRNVV 109
+LG G F V K + L+ + K+ S +S +G ++E E E +L +V H NV+
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 110 NLLGYCAHGAEKLLIYEYVI----------NESL-DKVLFSLIKDI----QILFRKKKT- 153
L + + +LI E V ESL ++ S IK I L KK
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAH 138
Query: 154 -DIKASNILLDDKWIP----KIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLS 208
D+K NI+L DK IP K+ DFG+A + N + GT ++APE V + L
Sbjct: 139 FDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN--IFGTPEFVAPEIVNYEPLG 196
Query: 209 VKADVFSFGVVILELISG 226
++AD++S GV+ L+SG
Sbjct: 197 LEADMWSIGVITYILLSG 214
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 96/198 (48%), Gaps = 30/198 (15%)
Query: 57 KLGEGGFGPVFKGK-----LDDGREIAVKKLSHSSNQG--KKEFENEAKLLARVQHRNVV 109
+LG G F V K + L+ + K+ S +S +G ++E E E +L +V H NV+
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 110 NLLGYCAHGAEKLLIYEYVI----------NESL-DKVLFSLIKDI----QILFRKKKT- 153
L + + +LI E V ESL ++ S IK I L KK
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAH 138
Query: 154 -DIKASNILLDDKWIP----KIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLS 208
D+K NI+L DK IP K+ DFG+A + N + GT ++APE V + L
Sbjct: 139 FDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN--IFGTPEFVAPEIVNYEPLG 196
Query: 209 VKADVFSFGVVILELISG 226
++AD++S GV+ L+SG
Sbjct: 197 LEADMWSIGVITYILLSG 214
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 97/196 (49%), Gaps = 32/196 (16%)
Query: 58 LGEGGFGPVFKG-KLDDGREI----AVKKLSHSSN-QGKKEFENEAKLLARVQHRNVVNL 111
LG G FG V+KG + +G ++ A+K+L +++ + KE +EA ++A V + +V L
Sbjct: 20 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 79
Query: 112 LGYCAHGAEKLLIY--------------------EYVINESLDKVL-FSLIKDIQILFRK 150
LG C +L+ +Y++N + + ++D +++ R
Sbjct: 80 LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLEDRRLVHR- 138
Query: 151 KKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN-GYMAPEYVMHGHLSV 209
D+ A N+L+ KI DFG+A+L ++ + +MA E ++H +
Sbjct: 139 ---DLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 195
Query: 210 KADVFSFGVVILELIS 225
++DV+S+GV + EL++
Sbjct: 196 QSDVWSYGVTVWELMT 211
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 104/215 (48%), Gaps = 34/215 (15%)
Query: 41 PFEALVSATKN--FHPSNKLGEGGFGPVFKG-KLDDGREI----AVKKLSHSSN-QGKKE 92
P +AL+ K F L G FG V+KG + +G ++ A+K+L +++ + KE
Sbjct: 11 PNQALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 70
Query: 93 FENEAKLLARVQHRNVVNLLGYCAHGAEKLLIY--------------------EYVINES 132
+EA ++A V + +V LLG C +L++ +Y++N
Sbjct: 71 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC 130
Query: 133 LDKVL-FSLIKDIQILFRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVA 191
+ + ++D +++ R D+ A N+L+ KI DFG+A+L ++ +
Sbjct: 131 VQIAKGMNYLEDRRLVHR----DLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 186
Query: 192 GTN-GYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
+MA E ++H + ++DV+S+GV + EL++
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 96/198 (48%), Gaps = 30/198 (15%)
Query: 57 KLGEGGFGPVFKGK-----LDDGREIAVKKLSHSSNQG--KKEFENEAKLLARVQHRNVV 109
+LG G F V K + L+ + K+ S +S +G ++E E E +L +V H NV+
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 110 NLLGYCAHGAEKLLIYEYVI----------NESL-DKVLFSLIKDI----QILFRKKKT- 153
L + + +LI E V ESL ++ S IK I L KK
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAH 138
Query: 154 -DIKASNILLDDKWIP----KIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLS 208
D+K NI+L DK IP K+ DFG+A + N + GT ++APE V + L
Sbjct: 139 FDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN--IFGTPEFVAPEIVNYEPLG 196
Query: 209 VKADVFSFGVVILELISG 226
++AD++S GV+ L+SG
Sbjct: 197 LEADMWSIGVITYILLSG 214
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 103/215 (47%), Gaps = 34/215 (15%)
Query: 41 PFEALVSATKN--FHPSNKLGEGGFGPVFKG-KLDDGREI----AVKKLSHSSN-QGKKE 92
P +AL+ K F LG G FG V+KG + +G ++ A+K+L +++ + KE
Sbjct: 11 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 70
Query: 93 FENEAKLLARVQHRNVVNLLGYCAHGAEKLLIY--------------------EYVINES 132
+EA ++A V + +V LLG C +L+ +Y++N
Sbjct: 71 ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC 130
Query: 133 LDKVL-FSLIKDIQILFRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVA 191
+ + ++D +++ R D+ A N+L+ KI DFG A+L ++ +
Sbjct: 131 VQIAKGMNYLEDRRLVHR----DLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 186
Query: 192 GTN-GYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
+MA E ++H + ++DV+S+GV + EL++
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 97/196 (49%), Gaps = 32/196 (16%)
Query: 58 LGEGGFGPVFKG-KLDDGREI----AVKKLSHSSN-QGKKEFENEAKLLARVQHRNVVNL 111
LG G FG V+KG + +G ++ A+K+L +++ + KE +EA ++A V + +V L
Sbjct: 17 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 76
Query: 112 LGYCAHGAEKLLIY--------------------EYVINESLDKVL-FSLIKDIQILFRK 150
LG C +L+ +Y++N + + ++D +++ R
Sbjct: 77 LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR- 135
Query: 151 KKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN-GYMAPEYVMHGHLSV 209
D+ A N+L+ KI DFG+A+L ++ + +MA E ++H +
Sbjct: 136 ---DLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 192
Query: 210 KADVFSFGVVILELIS 225
++DV+S+GV + EL++
Sbjct: 193 QSDVWSYGVTVWELMT 208
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 89/188 (47%), Gaps = 18/188 (9%)
Query: 57 KLGEGGFGPVFKGK-LDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYC 115
K+GEG G V + GR++AVK + Q ++ NE ++ QH NVV +
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY 111
Query: 116 AHGAEKLLIYEYV-------------INE-SLDKVLFSLIKDIQILFRKKKT--DIKASN 159
G E ++ E++ +NE + V ++++ + L + DIK+ +
Sbjct: 112 LVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDS 171
Query: 160 ILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVV 219
ILL K++DFG +D + GT +MAPE + + + D++S G++
Sbjct: 172 ILLTLDGRVKLSDFGFCAQISKDVPK-RKXLVGTPYWMAPEVISRSLYATEVDIWSLGIM 230
Query: 220 ILELISGQ 227
++E++ G+
Sbjct: 231 VIEMVDGE 238
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 96/198 (48%), Gaps = 30/198 (15%)
Query: 57 KLGEGGFGPVFKGK-----LDDGREIAVKKLSHSSNQG--KKEFENEAKLLARVQHRNVV 109
+LG G F V K + L+ + K+ S +S +G ++E E E +L +V H NV+
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 110 NLLGYCAHGAEKLLIYEYVI----------NESL-DKVLFSLIKDI----QILFRKKKT- 153
L + + +LI E V ESL ++ S IK I L KK
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAH 138
Query: 154 -DIKASNILLDDKWIP----KIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLS 208
D+K NI+L DK IP K+ DFG+A + N + GT ++APE V + L
Sbjct: 139 FDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN--IFGTPEFVAPEIVNYEPLG 196
Query: 209 VKADVFSFGVVILELISG 226
++AD++S GV+ L+SG
Sbjct: 197 LEADMWSIGVITYILLSG 214
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 106/270 (39%), Gaps = 41/270 (15%)
Query: 48 ATKNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFEN----EAKLLARV 103
A ++F LG+G FG V+ + + + I K+ + K E+ E ++ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 104 QHRNVVNLLGYCAHGAEKLLIYEY----VINESLDKV-----------LFSLIKDIQILF 148
+H N++ L GY LI EY + L K+ + L +
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 149 RKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
KK DIK N+LL KIADFG + P + + GT Y+ PE +
Sbjct: 126 SKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RAALCGTLDYLPPEMIEGRM 182
Query: 207 LSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASD 266
K D++S GV+ E + G+ N D YK+ +E P
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQDT----------YKRISRVEFTFPDFVTEG 232
Query: 267 SGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
+ D I+ + + +P RP +R V+
Sbjct: 233 ARDLISRLL-------KHNPSQRPMLREVL 255
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 96/198 (48%), Gaps = 30/198 (15%)
Query: 57 KLGEGGFGPVFKGK-----LDDGREIAVKKLSHSSNQG--KKEFENEAKLLARVQHRNVV 109
+LG G F V K + L+ + K+ S +S +G ++E E E +L +V H NV+
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 110 NLLGYCAHGAEKLLIYEYVI----------NESL-DKVLFSLIKDI----QILFRKKKT- 153
L + + +LI E V ESL ++ S IK I L KK
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAH 138
Query: 154 -DIKASNILLDDKWIP----KIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLS 208
D+K NI+L DK IP K+ DFG+A + N + GT ++APE V + L
Sbjct: 139 FDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN--IFGTPEFVAPEIVNYEPLG 196
Query: 209 VKADVFSFGVVILELISG 226
++AD++S GV+ L+SG
Sbjct: 197 LEADMWSIGVITYILLSG 214
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 103/215 (47%), Gaps = 34/215 (15%)
Query: 41 PFEALVSATKN--FHPSNKLGEGGFGPVFKG-KLDDGREI----AVKKLSHSSN-QGKKE 92
P +AL+ K F LG G FG V+KG + +G ++ A+ +L +++ + KE
Sbjct: 38 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKE 97
Query: 93 FENEAKLLARVQHRNVVNLLGYCAHGAEKLLIY--------------------EYVINES 132
+EA ++A V + +V LLG C +L+ +Y++N
Sbjct: 98 ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC 157
Query: 133 LDKVL-FSLIKDIQILFRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVA 191
+ + ++D +++ R D+ A N+L+ KI DFG+A+L ++ +
Sbjct: 158 VQIAKGMNYLEDRRLVHR----DLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 213
Query: 192 GTN-GYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
+MA E ++H + ++DV+S+GV + EL++
Sbjct: 214 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 106/270 (39%), Gaps = 41/270 (15%)
Query: 48 ATKNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFEN----EAKLLARV 103
A ++F LG+G FG V+ + + I K+ + K E+ E ++ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 104 QHRNVVNLLGYCAHGAEKLLIYEY----VINESLDKV-----------LFSLIKDIQILF 148
+H N++ L GY LI EY + L K+ + L +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 149 RKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
K+ DIK N+LL KIADFG + P + T + GT Y+ PE +
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTELCGTLDYLPPEMIEGRM 182
Query: 207 LSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASD 266
K D++S GV+ E + G+ N + YK+ +E P
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----------YKRISRVEFTFPDFVTEG 232
Query: 267 SGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
+ D I+ + + +P RP +R V+
Sbjct: 233 ARDLISRLL-------KHNPSQRPMLREVL 255
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 90/197 (45%), Gaps = 23/197 (11%)
Query: 51 NFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQG--KKEFENEAKLLARVQHRNV 108
+F ++LG G G VFK + +KL H + + + E ++L +
Sbjct: 10 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 69
Query: 109 VNLLGYCAHGAEKLLIYEYVINESLDKVL---------------FSLIKDIQILFRKKKT 153
V G E + E++ SLD+VL ++IK + L K K
Sbjct: 70 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI 129
Query: 154 ---DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVK 210
D+K SNIL++ + K+ DFG++ ++ + GT YM+PE + H SV+
Sbjct: 130 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMAN---EFVGTRSYMSPERLQGTHYSVQ 186
Query: 211 ADVFSFGVVILELISGQ 227
+D++S G+ ++E+ G+
Sbjct: 187 SDIWSMGLSLVEMAVGR 203
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 89/197 (45%), Gaps = 23/197 (11%)
Query: 51 NFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQG--KKEFENEAKLLARVQHRNV 108
+F ++LG G G VFK + +KL H + + + E ++L +
Sbjct: 69 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 128
Query: 109 VNLLGYCAHGAEKLLIYEYVINESLDKVL---------------FSLIKDIQILFRKKKT 153
V G E + E++ SLD+VL ++IK + L K K
Sbjct: 129 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI 188
Query: 154 ---DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVK 210
D+K SNIL++ + K+ DFG++ + + GT YM+PE + H SV+
Sbjct: 189 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN---SFVGTRSYMSPERLQGTHYSVQ 245
Query: 211 ADVFSFGVVILELISGQ 227
+D++S G+ ++E+ G+
Sbjct: 246 SDIWSMGLSLVEMAVGR 262
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 118/296 (39%), Gaps = 45/296 (15%)
Query: 22 EGDNEEDLEKIAAREQKHFPFEALVSATKNFHPSNKLGEGGFGPVFKGKLDDGREIAVKK 81
E + EE+L A +QK+ + A ++F LG+G FG V+ + + I K
Sbjct: 1 ENNPEEEL----ASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK 56
Query: 82 LSHSSNQGKKEFEN----EAKLLARVQHRNVVNLLGYCAHGAEKLLIYEY----VINESL 133
+ + K E+ E ++ + ++H N++ L GY LI EY + L
Sbjct: 57 VLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 116
Query: 134 DKV-----------LFSLIKDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMARLFP 180
K+ + L + K+ DIK N+LL KIADFG + P
Sbjct: 117 QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 176
Query: 181 EDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQN 240
+ T + GT Y+ PE + K D++S GV+ E + G+ N +
Sbjct: 177 SSR---RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-- 231
Query: 241 LLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
YK+ +E P + D I+ + + +P RP +R V+
Sbjct: 232 --------YKRISRVEFTFPDFVTEGARDLISRLL-------KHNPSQRPMLREVL 272
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 106/270 (39%), Gaps = 41/270 (15%)
Query: 48 ATKNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFEN----EAKLLARV 103
A ++F LG+G FG V+ + + I K+ + K E+ E ++ + +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 104 QHRNVVNLLGYCAHGAEKLLIYEY----VINESLDKV-----------LFSLIKDIQILF 148
+H N++ L GY LI EY + L K+ + L +
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 124
Query: 149 RKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
K+ DIK N+LL KIADFG + P + T + GT Y+ PE +
Sbjct: 125 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIEGRM 181
Query: 207 LSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASD 266
K D++S GV+ E + G+ N + YK+ +E P
Sbjct: 182 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----------YKRISRVEFTFPDFVTEG 231
Query: 267 SGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
+ D I+ + + +P RP +R V+
Sbjct: 232 ARDLISRLL-------KHNPSQRPMLREVL 254
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 106/270 (39%), Gaps = 41/270 (15%)
Query: 48 ATKNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFEN----EAKLLARV 103
A ++F LG+G FG V+ + + I K+ + K E+ E ++ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 104 QHRNVVNLLGYCAHGAEKLLIYEY----VINESLDKV-----------LFSLIKDIQILF 148
+H N++ L GY LI EY + L K+ + L +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 149 RKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
K+ DIK N+LL KIADFG + P + T + GT Y+ PE +
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTXLCGTLDYLPPEMIEGRM 182
Query: 207 LSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASD 266
K D++S GV+ E + G+ N + YK+ +E P
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----------YKRISRVEFTFPDFVTEG 232
Query: 267 SGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
+ D I+ + + +P RP +R V+
Sbjct: 233 ARDLISRLL-------KHNPSQRPMLREVL 255
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 91/224 (40%), Gaps = 57/224 (25%)
Query: 51 NFHPSNKLGEGGFGPVFKGKLD-DGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVV 109
+F +G GGFG VFK K DG+ ++++ +++ + E E K LA++ H N+V
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKA----EREVKALAKLDHVNIV 68
Query: 110 NLLG------------------------------------------YCAHGAEKLLIYEY 127
+ G +C G + I E
Sbjct: 69 HYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWI-EK 127
Query: 128 VINESLDKVLF-----SLIKDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMARLFP 180
E LDKVL + K + + KK D+K SNI L D KI DFG+
Sbjct: 128 RRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLK 187
Query: 181 EDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVVILELI 224
D TR GT YM+PE + + D+++ G+++ EL+
Sbjct: 188 NDGKR--TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 106/270 (39%), Gaps = 41/270 (15%)
Query: 48 ATKNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFEN----EAKLLARV 103
A ++F LG+G FG V+ + + I K+ + K E+ E ++ + +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 104 QHRNVVNLLGYCAHGAEKLLIYEY----VINESLDKV-----------LFSLIKDIQILF 148
+H N++ L GY LI EY + L K+ + L +
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 129
Query: 149 RKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
K+ DIK N+LL KIADFG + P + T + GT Y+ PE +
Sbjct: 130 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIEGRM 186
Query: 207 LSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASD 266
K D++S GV+ E + G+ N + YK+ +E P
Sbjct: 187 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----------YKRISRVEFTFPDFVTEG 236
Query: 267 SGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
+ D I+ + + +P RP +R V+
Sbjct: 237 ARDLISRLL-------KHNPSQRPMLREVL 259
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 96/198 (48%), Gaps = 30/198 (15%)
Query: 57 KLGEGGFGPVFKGK-----LDDGREIAVKKLSHSSNQG--KKEFENEAKLLARVQHRNVV 109
+LG G F V K + L+ + K+ S +S +G ++E E E +L +V H N++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNII 78
Query: 110 NLLGYCAHGAEKLLIYEYVI----------NESL-DKVLFSLIKDI----QILFRKKKT- 153
L + + +LI E V ESL ++ S IK I L KK
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAH 138
Query: 154 -DIKASNILLDDKWIP----KIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLS 208
D+K NI+L DK IP K+ DFG+A + N + GT ++APE V + L
Sbjct: 139 FDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN--IFGTPEFVAPEIVNYEPLG 196
Query: 209 VKADVFSFGVVILELISG 226
++AD++S GV+ L+SG
Sbjct: 197 LEADMWSIGVITYILLSG 214
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 107/270 (39%), Gaps = 41/270 (15%)
Query: 48 ATKNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFEN----EAKLLARV 103
A ++F LG+G FG V+ + + I K+ + K E+ E ++ + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 104 QHRNVVNLLGYCAHGAEKLLIYEY----VINESLDKV-----------LFSLIKDIQILF 148
+H N++ L GY LI EY + L K+ + L +
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 149 RKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
K+ DIK N+LL KIADFG + P + T ++GT Y+ PE +
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSR---RTTLSGTLDYLPPEMIEGRM 183
Query: 207 LSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASD 266
K D++S GV+ E + G+ N + YK+ +E P
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----------YKRISRVEFTFPDFVTEG 233
Query: 267 SGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
+ D I+ + + +P RP +R V+
Sbjct: 234 ARDLISRLL-------KHNPSQRPMLREVL 256
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 132/282 (46%), Gaps = 58/282 (20%)
Query: 57 KLGEGGFGPVFKGKL-DDGREIAVKKLSHSSNQGK-------KEFENEAKLLARVQHRNV 108
++G+GGFG V KG+L D +A+K L ++G+ +EF+ E +++ + H N+
Sbjct: 26 QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 109 VNLLGYCAHGAEKLLIYEYV-----INESLDK-------VLFSLIKDIQILFRKKKT--- 153
V L G H ++++ E+V + LDK V L+ DI + +
Sbjct: 86 VKLYG-LMHNPPRMVM-EFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNP 143
Query: 154 -----DIKASNILLD--DKWIP---KIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVM 203
D+++ NI L D+ P K+ADFG++ + H + + G +MAPE +
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS----QQSVHSVSGLLGNFQWMAPETIG 199
Query: 204 HGHLSV--KADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSL--EIVD 259
S KAD +SF +++ +++G+ F+ +++Y K + E +
Sbjct: 200 AEEESYTEKADTYSFAMILYTILTGE--GPFD---------EYSYGKIKFINMIREEGLR 248
Query: 260 PSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVVVMLSK 301
P++ D ++ I+ LC GDP+ RP +V LS+
Sbjct: 249 PTI-PEDCPPRLRNVIE---LCWSGDPKKRPHFSYIVKELSE 286
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 94/203 (46%), Gaps = 44/203 (21%)
Query: 58 LGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFEN-EAKLLARVQHRNVVNLLGYCA 116
+G G FG VF+ KL + E+A+KK+ K F+N E +++ V+H NVV+L +
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIKKVLQD-----KRFKNRELQIMRIVKHPNVVDLKAFFY 102
Query: 117 HGAEKL------LIYEYV-------------INESLDKVLFSL-----------IKDIQI 146
+K L+ EYV + +++ +L L I I I
Sbjct: 103 SNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGI 162
Query: 147 LFRKKKTDIKASNILLD-DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHG 205
R DIK N+LLD + K+ DFG A++ + +V+ + Y APE +
Sbjct: 163 CHR----DIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSX--ICSRYYRAPELIFGA 216
Query: 206 -HLSVKADVFSFGVVILELISGQ 227
+ + D++S G V+ EL+ GQ
Sbjct: 217 TNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 106/270 (39%), Gaps = 41/270 (15%)
Query: 48 ATKNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFEN----EAKLLARV 103
A ++F LG+G FG V+ + + I K+ + K E+ E ++ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 104 QHRNVVNLLGYCAHGAEKLLIYEY----VINESLDKV-----------LFSLIKDIQILF 148
+H N++ L GY LI EY + L K+ + L +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 149 RKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
K+ DIK N+LL KIADFG + P + T + GT Y+ PE +
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIEGRM 182
Query: 207 LSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASD 266
K D++S GV+ E + G+ N + YK+ +E P
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----------YKRISRVEFTFPDFVTEG 232
Query: 267 SGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
+ D I+ + + +P RP +R V+
Sbjct: 233 ARDLISRLL-------KHNPSQRPMLREVL 255
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 103/215 (47%), Gaps = 34/215 (15%)
Query: 41 PFEALVSATKN--FHPSNKLGEGGFGPVFKG-KLDDGREI----AVKKLSHSSN-QGKKE 92
P +AL+ K F L G FG V+KG + +G ++ A+K+L +++ + KE
Sbjct: 11 PNQALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 70
Query: 93 FENEAKLLARVQHRNVVNLLGYCAHGAEKLLIY--------------------EYVINES 132
+EA ++A V + +V LLG C +L+ +Y++N
Sbjct: 71 ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC 130
Query: 133 LDKVL-FSLIKDIQILFRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVA 191
+ + ++D +++ R D+ A N+L+ KI DFG+A+L ++ +
Sbjct: 131 VQIAKGMNYLEDRRLVHR----DLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 186
Query: 192 GTN-GYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
+MA E ++H + ++DV+S+GV + EL++
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 95/195 (48%), Gaps = 25/195 (12%)
Query: 58 LGEGGFGPVFKGKLDDGR-EIAVKKLSHSSNQGK-KEFENEAKLLARVQHRNVVNL---- 111
+GEG +G V + + +A+KK+S +Q + E K+L R +H N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 112 ----------LGYCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQILFRKK--KTDI 155
+ H GA+ KLL +++ N+ + L+ +++ ++ + D+
Sbjct: 111 RAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 170
Query: 156 KASNILLDDKWIPKIADFGMARLFPEDQTHVN--TRVAGTNGYMAPEYVMHGHLSVKA-D 212
K SN+LL+ KI DFG+AR+ D H T T Y APE +++ K+ D
Sbjct: 171 KPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 230
Query: 213 VFSFGVVILELISGQ 227
++S G ++ E++S +
Sbjct: 231 IWSVGCILAEMLSNR 245
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 90/214 (42%), Gaps = 45/214 (21%)
Query: 52 FHPSN-----KLGEGGFGPVFK-GKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQH 105
F PS+ LG+G FG K + G + +K+L + ++ F E K++ ++H
Sbjct: 7 FRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEH 66
Query: 106 RNVVNLLGYCAHGAEKLLIYEYVINESLDKVL------------FSLIKDI--------- 144
NV+ +G I EY+ +L ++ S KDI
Sbjct: 67 PNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHS 126
Query: 145 -QILFRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVN-------------TRV 190
I+ R D+ + N L+ + +ADFG+ARL +++T V
Sbjct: 127 MNIIHR----DLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTV 182
Query: 191 AGTNGYMAPEYVMHGHLSVKADVFSFGVVILELI 224
G +MAPE + K DVFSFG+V+ E+I
Sbjct: 183 VGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 103/215 (47%), Gaps = 34/215 (15%)
Query: 41 PFEALVSATKN--FHPSNKLGEGGFGPVFKG-KLDDGREI----AVKKLSHSSN-QGKKE 92
P +AL+ K F L G FG V+KG + +G ++ A+K+L +++ + KE
Sbjct: 4 PNQALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 63
Query: 93 FENEAKLLARVQHRNVVNLLGYCAHGAEKLLIY--------------------EYVINES 132
+EA ++A V + +V LLG C +L+ +Y++N
Sbjct: 64 ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC 123
Query: 133 LDKVL-FSLIKDIQILFRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVA 191
+ + ++D +++ R D+ A N+L+ KI DFG+A+L ++ +
Sbjct: 124 VQIAKGMNYLEDRRLVHR----DLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 192 GTN-GYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
+MA E ++H + ++DV+S+GV + EL++
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 106/270 (39%), Gaps = 41/270 (15%)
Query: 48 ATKNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFEN----EAKLLARV 103
A ++F LG+G FG V+ + + I K+ + K E+ E ++ + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 104 QHRNVVNLLGYCAHGAEKLLIYEY----VINESLDKV-----------LFSLIKDIQILF 148
+H N++ L GY LI EY + L K+ + L +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 149 RKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
K+ DIK N+LL KIADFG + P + T + GT Y+ PE +
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIEGRM 187
Query: 207 LSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASD 266
K D++S GV+ E + G+ N + YK+ +E P
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----------YKRISRVEFTFPDFVTEG 237
Query: 267 SGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
+ D I+ + + +P RP +R V+
Sbjct: 238 ARDLISRLL-------KHNPSQRPMLREVL 260
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 106/270 (39%), Gaps = 41/270 (15%)
Query: 48 ATKNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFEN----EAKLLARV 103
A ++F LG+G FG V+ + + I K+ + K E+ E ++ + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 104 QHRNVVNLLGYCAHGAEKLLIYEY----VINESLDKV-----------LFSLIKDIQILF 148
+H N++ L GY LI EY + L K+ + L +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 149 RKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
K+ DIK N+LL KIADFG + P + T + GT Y+ PE +
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEXIEGRX 187
Query: 207 LSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASD 266
K D++S GV+ E + G+ N + YK+ +E P
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----------YKRISRVEFTFPDFVTEG 237
Query: 267 SGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
+ D I+ + + +P RP +R V+
Sbjct: 238 ARDLISRLL-------KHNPSQRPXLREVL 260
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 106/270 (39%), Gaps = 41/270 (15%)
Query: 48 ATKNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFEN----EAKLLARV 103
A ++F LG+G FG V+ + + I K+ + K E+ E ++ + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 104 QHRNVVNLLGYCAHGAEKLLIYEY----VINESLDKV-----------LFSLIKDIQILF 148
+H N++ L GY LI EY + L K+ + L +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 149 RKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
K+ DIK N+LL KIADFG + P + T + GT Y+ PE +
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIEGRM 185
Query: 207 LSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASD 266
K D++S GV+ E + G+ N + YK+ +E P
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----------YKRISRVEFTFPDFVTEG 235
Query: 267 SGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
+ D I+ + + +P RP +R V+
Sbjct: 236 ARDLISRLL-------KHNPSQRPMLREVL 258
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 107/270 (39%), Gaps = 41/270 (15%)
Query: 48 ATKNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFEN----EAKLLARV 103
A ++F LG+G FG V+ + + I K+ + K E+ E ++ + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 104 QHRNVVNLLGYCAHGAEKLLIYEYV----INESLDKV-----------LFSLIKDIQILF 148
+H N++ L GY LI EY + + L K+ + L +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH 130
Query: 149 RKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
K+ DIK N+LL KIADFG + P + T + GT Y+ PE +
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIEGRM 187
Query: 207 LSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASD 266
K D++S GV+ E + G+ N + YK+ +E P
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----------YKRISRVEFTFPDFVTEG 237
Query: 267 SGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
+ D I+ + + +P RP +R V+
Sbjct: 238 ARDLISRLL-------KHNPSQRPMLREVL 260
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 89/197 (45%), Gaps = 23/197 (11%)
Query: 51 NFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQG--KKEFENEAKLLARVQHRNV 108
+F ++LG G G VFK + +KL H + + + E ++L +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 109 VNLLGYCAHGAEKLLIYEYVINESLDKVL---------------FSLIKDIQILFRKKKT 153
V G E + E++ SLD+VL ++IK + L K K
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI 126
Query: 154 ---DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVK 210
D+K SNIL++ + K+ DFG++ + + GT YM+PE + H SV+
Sbjct: 127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN---SFVGTRSYMSPERLQGTHYSVQ 183
Query: 211 ADVFSFGVVILELISGQ 227
+D++S G+ ++E+ G+
Sbjct: 184 SDIWSMGLSLVEMAVGR 200
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 35/208 (16%)
Query: 48 ATKNFHPSN------KLGEGGFGPVFKGKLDDGREIAVKKLSHS-SNQGKKEFENEAKLL 100
T++ +P + +LG+G FG V+K + + +A K+ + S + +++ E +L
Sbjct: 29 VTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDIL 88
Query: 101 ARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFSL---IKDIQILFRKKKT---- 153
A H N+V LL + ++ E+ ++D V+ L + + QI K+T
Sbjct: 89 ASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDAL 148
Query: 154 -----------DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTR--VAGTNGYMAPE 200
D+KA NIL K+ADFG++ ++ + R GT +MAPE
Sbjct: 149 NYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVS---AKNTRXIQRRDSFIGTPYWMAPE 205
Query: 201 YVMHGH-----LSVKADVFSFGVVILEL 223
VM KADV+S G+ ++E+
Sbjct: 206 VVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 106/270 (39%), Gaps = 41/270 (15%)
Query: 48 ATKNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFEN----EAKLLARV 103
A ++F LG+G FG V+ + + I K+ + K E+ E ++ + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 104 QHRNVVNLLGYCAHGAEKLLIYEY----VINESLDKV-----------LFSLIKDIQILF 148
+H N++ L GY LI EY + L K+ + L +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 149 RKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
K+ DIK N+LL KIADFG + P + T + GT Y+ PE +
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIEGRM 185
Query: 207 LSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASD 266
K D++S GV+ E + G+ N + YK+ +E P
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----------YKRISRVEFTFPDFVTEG 235
Query: 267 SGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
+ D I+ + + +P RP +R V+
Sbjct: 236 ARDLISRLL-------KHNPSQRPMLREVL 258
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 89/197 (45%), Gaps = 23/197 (11%)
Query: 51 NFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQG--KKEFENEAKLLARVQHRNV 108
+F ++LG G G VFK + +KL H + + + E ++L +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 109 VNLLGYCAHGAEKLLIYEYVINESLDKVL---------------FSLIKDIQILFRKKKT 153
V G E + E++ SLD+VL ++IK + L K K
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI 126
Query: 154 ---DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVK 210
D+K SNIL++ + K+ DFG++ + + GT YM+PE + H SV+
Sbjct: 127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN---SFVGTRSYMSPERLQGTHYSVQ 183
Query: 211 ADVFSFGVVILELISGQ 227
+D++S G+ ++E+ G+
Sbjct: 184 SDIWSMGLSLVEMAVGR 200
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 96/192 (50%), Gaps = 26/192 (13%)
Query: 58 LGEGGFGPVFKGK-LDDGREIAVKKLSHSS--NQGKKEFENEAKLLARVQHRNVVNLLGY 114
LG+G FG V K K +E AVK ++ +S N+ E +LL ++ H N++ L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 115 CAHGAEKLLIYE-YVINESLDKVL----FS------LIKDI--QILFRKKKT----DIKA 157
+ ++ E Y E D+++ FS +IK + I + K D+K
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKP 149
Query: 158 SNILLDDK---WIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVF 214
NILL+ K KI DFG++ F ++ T + R+ GT Y+APE V+ G K DV+
Sbjct: 150 ENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYYIAPE-VLRGTYDEKCDVW 206
Query: 215 SFGVVILELISG 226
S GV++ L+SG
Sbjct: 207 SAGVILYILLSG 218
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 89/197 (45%), Gaps = 23/197 (11%)
Query: 51 NFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQG--KKEFENEAKLLARVQHRNV 108
+F ++LG G G VFK + +KL H + + + E ++L +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 109 VNLLGYCAHGAEKLLIYEYVINESLDKVL---------------FSLIKDIQILFRKKKT 153
V G E + E++ SLD+VL ++IK + L K K
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI 126
Query: 154 ---DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVK 210
D+K SNIL++ + K+ DFG++ + + GT YM+PE + H SV+
Sbjct: 127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN---SFVGTRSYMSPERLQGTHYSVQ 183
Query: 211 ADVFSFGVVILELISGQ 227
+D++S G+ ++E+ G+
Sbjct: 184 SDIWSMGLSLVEMAVGR 200
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 35/208 (16%)
Query: 48 ATKNFHPSN------KLGEGGFGPVFKGKLDDGREIAVKKLSHS-SNQGKKEFENEAKLL 100
T++ +P + +LG+G FG V+K + + +A K+ + S + +++ E +L
Sbjct: 29 VTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDIL 88
Query: 101 ARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFSL---IKDIQILFRKKKT---- 153
A H N+V LL + ++ E+ ++D V+ L + + QI K+T
Sbjct: 89 ASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDAL 148
Query: 154 -----------DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTR--VAGTNGYMAPE 200
D+KA NIL K+ADFG++ ++ + R GT +MAPE
Sbjct: 149 NYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVS---AKNTRXIQRRDXFIGTPYWMAPE 205
Query: 201 YVMHGH-----LSVKADVFSFGVVILEL 223
VM KADV+S G+ ++E+
Sbjct: 206 VVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 120/301 (39%), Gaps = 45/301 (14%)
Query: 17 LGSSREGDNEEDLEKIAAREQKHFPFEALVSATKNFHPSNKLGEGGFGPVFKGKLDDGRE 76
L S+ E + EE+L A +QK+ + A ++F LG+G FG V+ + +
Sbjct: 5 LPSAPENNPEEEL----ASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKF 60
Query: 77 IAVKKLSHSSNQGKKEFEN----EAKLLARVQHRNVVNLLGYCAHGAEKLLIYEY----V 128
I K+ + K E+ E ++ + ++H N++ L GY LI EY
Sbjct: 61 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 120
Query: 129 INESLDKV-----------LFSLIKDIQILFRKK--KTDIKASNILLDDKWIPKIADFGM 175
+ L K+ + L + K+ DIK N+LL KIADFG
Sbjct: 121 VYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW 180
Query: 176 ARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLD 235
+ P + + GT Y+ PE + K D++S GV+ E + G+ N
Sbjct: 181 SVHAPSSR---RDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 237
Query: 236 VDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRV 295
+ YK+ +E P + D I+ + + +P RP +R V
Sbjct: 238 QET----------YKRISRVEFTFPDFVTEGARDLISRLL-------KHNPSQRPMLREV 280
Query: 296 V 296
+
Sbjct: 281 L 281
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 95/213 (44%), Gaps = 45/213 (21%)
Query: 48 ATKNFHPSN------KLGEGGFGPVFKGKLDDGREIAVKKLSHS-SNQGKKEFENEAKLL 100
T++ +P + +LG+G FG V+K + + +A K+ + S + +++ E +L
Sbjct: 29 VTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDIL 88
Query: 101 ARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFSL---IKDIQILFRKKKT---- 153
A H N+V LL + ++ E+ ++D V+ L + + QI K+T
Sbjct: 89 ASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDAL 148
Query: 154 -----------DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRV-------AGTNG 195
D+KA NIL K+ADFG++ NTR GT
Sbjct: 149 NYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSA--------KNTRTIQRRDSFIGTPY 200
Query: 196 YMAPEYVMHGH-----LSVKADVFSFGVVILEL 223
+MAPE VM KADV+S G+ ++E+
Sbjct: 201 WMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 89/197 (45%), Gaps = 23/197 (11%)
Query: 51 NFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQG--KKEFENEAKLLARVQHRNV 108
+F ++LG G G VFK + +KL H + + + E ++L +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 109 VNLLGYCAHGAEKLLIYEYVINESLDKVL---------------FSLIKDIQILFRKKKT 153
V G E + E++ SLD+VL ++IK + L K K
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI 126
Query: 154 ---DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVK 210
D+K SNIL++ + K+ DFG++ + + GT YM+PE + H SV+
Sbjct: 127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN---SFVGTRSYMSPERLQGTHYSVQ 183
Query: 211 ADVFSFGVVILELISGQ 227
+D++S G+ ++E+ G+
Sbjct: 184 SDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 89/197 (45%), Gaps = 23/197 (11%)
Query: 51 NFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQG--KKEFENEAKLLARVQHRNV 108
+F ++LG G G VFK + +KL H + + + E ++L +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 109 VNLLGYCAHGAEKLLIYEYVINESLDKVL---------------FSLIKDIQILFRKKKT 153
V G E + E++ SLD+VL ++IK + L K K
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI 126
Query: 154 ---DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVK 210
D+K SNIL++ + K+ DFG++ + + GT YM+PE + H SV+
Sbjct: 127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN---SFVGTRSYMSPERLQGTHYSVQ 183
Query: 211 ADVFSFGVVILELISGQ 227
+D++S G+ ++E+ G+
Sbjct: 184 SDIWSMGLSLVEMAVGR 200
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 94/196 (47%), Gaps = 27/196 (13%)
Query: 58 LGEGGFGPVFKGKLDDGRE--IAVKKLSHSSNQGK-KEFENEAKLLARVQHRNVVNLLGY 114
+GEG +G V D R+ +A+KK+S +Q + E ++L R +H NV+ +
Sbjct: 51 IGEGAYGMV-SSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDI 109
Query: 115 CAHGAEKLLIYEYVINESLDKVLFSLIKDIQI-----------LFRKKKT---------D 154
+ + Y++ + ++ L+ L+K Q+ + R K D
Sbjct: 110 LRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIHSANVLHRD 169
Query: 155 IKASNILLDDKWIPKIADFGMARLF-PE-DQTHVNTRVAGTNGYMAPEYVMHGHLSVKA- 211
+K SN+L++ KI DFG+AR+ PE D T T T Y APE +++ K+
Sbjct: 170 LKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSI 229
Query: 212 DVFSFGVVILELISGQ 227
D++S G ++ E++S +
Sbjct: 230 DIWSVGCILAEMLSNR 245
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 106/270 (39%), Gaps = 41/270 (15%)
Query: 48 ATKNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFEN----EAKLLARV 103
A ++F LG+G FG V+ + + I K+ + K E+ E ++ + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 104 QHRNVVNLLGYCAHGAEKLLIYEY----VINESLDKV-----------LFSLIKDIQILF 148
+H N++ L GY LI EY + L K+ + L +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 149 RKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
K+ DIK N+LL KIADFG + P + T + GT Y+ PE +
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTLDYLPPEMIEGRM 187
Query: 207 LSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASD 266
K D++S GV+ E + G+ N + YK+ +E P
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----------YKRISRVEFTFPDFVTEG 237
Query: 267 SGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
+ D I+ + + +P RP +R V+
Sbjct: 238 ARDLISRLL-------KHNPSQRPMLREVL 260
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 96/192 (50%), Gaps = 26/192 (13%)
Query: 58 LGEGGFGPVFKGK-LDDGREIAVKKLSHSS--NQGKKEFENEAKLLARVQHRNVVNLLGY 114
LG+G FG V K K +E AVK ++ +S N+ E +LL ++ H N++ L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 115 CAHGAEKLLIYE-YVINESLDKVL----FS------LIKDI--QILFRKKKT----DIKA 157
+ ++ E Y E D+++ FS +IK + I + K D+K
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKP 149
Query: 158 SNILLDDK---WIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVF 214
NILL+ K KI DFG++ F ++ T + R+ GT Y+APE V+ G K DV+
Sbjct: 150 ENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYYIAPE-VLRGTYDEKCDVW 206
Query: 215 SFGVVILELISG 226
S GV++ L+SG
Sbjct: 207 SAGVILYILLSG 218
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 106/270 (39%), Gaps = 41/270 (15%)
Query: 48 ATKNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFEN----EAKLLARV 103
A ++F LG+G FG V+ + + I K+ + K E+ E ++ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 104 QHRNVVNLLGYCAHGAEKLLIYEY----VINESLDKV-----------LFSLIKDIQILF 148
+H N++ L GY LI EY + L K+ + L +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 149 RKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
K+ DIK N+LL KIADFG + P + T + GT Y+ PE +
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTLDYLPPEMIEGRM 182
Query: 207 LSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASD 266
K D++S GV+ E + G+ N + YK+ +E P
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----------YKRISRVEFTFPDFVTEG 232
Query: 267 SGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
+ D I+ + + +P RP +R V+
Sbjct: 233 ARDLISRLL-------KHNPSQRPMLREVL 255
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 106/270 (39%), Gaps = 41/270 (15%)
Query: 48 ATKNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFEN----EAKLLARV 103
A ++F LG+G FG V+ + + I K+ + K E+ E ++ + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 104 QHRNVVNLLGYCAHGAEKLLIYEY----VINESLDKV-----------LFSLIKDIQILF 148
+H N++ L GY LI EY + L K+ + L +
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 149 RKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
K+ DIK N+LL KIADFG + P + T + GT Y+ PE +
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTLDYLPPEMIEGRM 183
Query: 207 LSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASD 266
K D++S GV+ E + G+ N + YK+ +E P
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----------YKRISRVEFTFPDFVTEG 233
Query: 267 SGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
+ D I+ + + +P RP +R V+
Sbjct: 234 ARDLISRLL-------KHNPSQRPMLREVL 256
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 96/192 (50%), Gaps = 26/192 (13%)
Query: 58 LGEGGFGPVFKGK-LDDGREIAVKKLSHSS--NQGKKEFENEAKLLARVQHRNVVNLLGY 114
LG+G FG V K K +E AVK ++ +S N+ E +LL ++ H N++ L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 115 CAHGAEKLLIYE-YVINESLDKVL----FS------LIKDI--QILFRKKKT----DIKA 157
+ ++ E Y E D+++ FS +IK + I + K D+K
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKP 149
Query: 158 SNILLDDK---WIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVF 214
NILL+ K KI DFG++ F ++ T + R+ GT Y+APE V+ G K DV+
Sbjct: 150 ENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYYIAPE-VLRGTYDEKCDVW 206
Query: 215 SFGVVILELISG 226
S GV++ L+SG
Sbjct: 207 SAGVILYILLSG 218
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 87/211 (41%), Gaps = 35/211 (16%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLD------DGREIAVKKLSH-SSNQGKKEFENEAKLLAR 102
KN LG G FG V++G++ ++AVK L S Q + +F EA ++++
Sbjct: 31 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 90
Query: 103 VQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKV------------------LFSLIKDI 144
+ H+N+V +G + ++ E + L L + +DI
Sbjct: 91 LNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 150
Query: 145 QILFRKKKT------DIKASNILLDDKW---IPKIADFGMAR-LFPEDQTHVNTRVAGTN 194
+ + DI A N LL + KI DFGMAR ++
Sbjct: 151 ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 210
Query: 195 GYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
+M PE M G + K D +SFGV++ E+ S
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 87/211 (41%), Gaps = 35/211 (16%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLD------DGREIAVKKLSH-SSNQGKKEFENEAKLLAR 102
KN LG G FG V++G++ ++AVK L S Q + +F EA ++++
Sbjct: 45 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 104
Query: 103 VQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKV------------------LFSLIKDI 144
+ H+N+V +G + ++ E + L L + +DI
Sbjct: 105 LNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 164
Query: 145 QILFRKKKT------DIKASNILLDDKW---IPKIADFGMAR-LFPEDQTHVNTRVAGTN 194
+ + DI A N LL + KI DFGMAR ++
Sbjct: 165 ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 224
Query: 195 GYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
+M PE M G + K D +SFGV++ E+ S
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 103/216 (47%), Gaps = 39/216 (18%)
Query: 42 FEALVSATKNFHPSNKLGEGGFGPVFKGKL-DDGREIAVKKLSHSSNQGKKEF------- 93
++A ++ +N ++G G G V+K + G IAVK++ S N+ + +
Sbjct: 20 YQAEINDLENL---GEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDV 76
Query: 94 ---ENEAKLLARVQHRNVVN--------LLGYCAHGAEKLL---IYEYVINE---SLDKV 136
++ + + + N L+G CA +K + I E ++ + ++ K
Sbjct: 77 VLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKA 136
Query: 137 LFSLIKDIQILFRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGY 196
L+ L + ++ R D+K SNILLD++ K+ DFG++ +D+ R AG Y
Sbjct: 137 LYYLKEKHGVIHR----DVKPSNILLDERGQIKLCDFGISGRLVDDK--AKDRSAGCAAY 190
Query: 197 MAPEYV-----MHGHLSVKADVFSFGVVILELISGQ 227
MAPE + ++ADV+S G+ ++EL +GQ
Sbjct: 191 MAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 99/216 (45%), Gaps = 27/216 (12%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLD-DGREIAVKKLS-HSSNQGKKEFE-NEAKLLARVQHR 106
+NF K+GEG +G V+K + G +A+KK+ + +G E LL + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 107 NVVNLLGYCAHGAEKL-LIYEYVINE--------SLDKVLFSLIKD--IQIL-------- 147
N+V LL H KL L++E+V + +L + LIK Q+L
Sbjct: 62 NIVKLLD-VIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 148 FRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHG-H 206
R D+K N+L++ + K+ADFG+AR F T T Y APE ++ +
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 207 LSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLL 242
S D++S G + E+++ R + F D + L
Sbjct: 180 YSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 213
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 107/270 (39%), Gaps = 41/270 (15%)
Query: 48 ATKNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFEN----EAKLLARV 103
A ++F LG+G FG V+ + + I K+ + K E+ E ++ + +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 104 QHRNVVNLLGYCAHGAEKLLIYEY----VINESLDKV-----------LFSLIKDIQILF 148
+H N++ L GY LI EY + L K+ + L +
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 122
Query: 149 RKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
K+ DIK N+LL KIADFG + P + T + GT Y+ PE +
Sbjct: 123 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIEGRM 179
Query: 207 LSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASD 266
K D++S GV+ E + G+ F + + YK+ +E P
Sbjct: 180 HDEKVDLWSLGVLCYEFLVGK--PPFEANTYQET--------YKRISRVEFTFPDFVTEG 229
Query: 267 SGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
+ D I+ + + +P RP +R V+
Sbjct: 230 ARDLISRLL-------KHNPSQRPMLREVL 252
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 106/270 (39%), Gaps = 41/270 (15%)
Query: 48 ATKNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFEN----EAKLLARV 103
A ++F LG+G FG V+ + + I K+ + K E+ E ++ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 104 QHRNVVNLLGYCAHGAEKLLIYEY----VINESLDKV-----------LFSLIKDIQILF 148
+H N++ L GY LI EY + L K+ + L +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 149 RKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
K+ DIK N+LL KIADFG + P + T + GT Y+ PE +
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTLDYLPPEMIEGRM 182
Query: 207 LSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASD 266
K D++S GV+ E + G+ N + YK+ +E P
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----------YKRISRVEFTFPDFVTEG 232
Query: 267 SGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
+ D I+ + + +P RP +R V+
Sbjct: 233 ARDLISRLL-------KHNPSQRPMLREVL 255
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 89/197 (45%), Gaps = 23/197 (11%)
Query: 51 NFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQG--KKEFENEAKLLARVQHRNV 108
+F ++LG G G VFK + +KL H + + + E ++L +
Sbjct: 26 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 85
Query: 109 VNLLGYCAHGAEKLLIYEYVINESLDKVL---------------FSLIKDIQILFRKKKT 153
V G E + E++ SLD+VL ++IK + L K K
Sbjct: 86 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI 145
Query: 154 ---DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVK 210
D+K SNIL++ + K+ DFG++ + + GT YM+PE + H SV+
Sbjct: 146 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN---SFVGTRSYMSPERLQGTHYSVQ 202
Query: 211 ADVFSFGVVILELISGQ 227
+D++S G+ ++E+ G+
Sbjct: 203 SDIWSMGLSLVEMAVGR 219
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 94/202 (46%), Gaps = 25/202 (12%)
Query: 47 SATKNFHPSNKLGEGGFGPVFKGKLDDGREI-AVKKLSHSSNQGKKEFEN-----EAKLL 100
S K + + LGEG F V+K + + +I A+KK+ K+ N E KLL
Sbjct: 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLL 66
Query: 101 ARVQHRNVVNLLGYCAHGAEKLLIYEY-------VINESLDKVLFSLIKDIQILFRKK-- 151
+ H N++ LL H + L++++ +I ++ + S IK ++ +
Sbjct: 67 QELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLE 126
Query: 152 --------KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVM 203
D+K +N+LLD+ + K+ADFG+A+ F +V T Y APE +
Sbjct: 127 YLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV-TRWYRAPELLF 185
Query: 204 HGHL-SVKADVFSFGVVILELI 224
+ V D+++ G ++ EL+
Sbjct: 186 GARMYGVGVDMWAVGCILAELL 207
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 27/216 (12%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLD-DGREIAVKKLS-HSSNQGKKEFE-NEAKLLARVQHR 106
+NF K+GEG +G V+K + G +A+KK+ + +G E LL + H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 107 NVVNLLGYCAHGAEKL-LIYEYVINE--------SLDKVLFSLIKD--IQIL-------- 147
N+V LL H KL L++E++ + +L + LIK Q+L
Sbjct: 70 NIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 148 FRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVM-HGH 206
R D+K N+L++ + K+ADFG+AR F T T Y APE ++ +
Sbjct: 129 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGXKY 187
Query: 207 LSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLL 242
S D++S G + E+++ R + F D + L
Sbjct: 188 YSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 221
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 131/282 (46%), Gaps = 58/282 (20%)
Query: 57 KLGEGGFGPVFKGKL-DDGREIAVKKLSHSSNQGK-------KEFENEAKLLARVQHRNV 108
++G+GGFG V KG+L D +A+K L ++G+ +EF+ E +++ + H N+
Sbjct: 26 QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 109 VNLLGYCAHGAEKLLIYEYV-----INESLDK-------VLFSLIKDIQILFRKKKT--- 153
V L G H ++++ E+V + LDK V L+ DI + +
Sbjct: 86 VKLYG-LMHNPPRMVM-EFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNP 143
Query: 154 -----DIKASNILLD--DKWIP---KIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVM 203
D+++ NI L D+ P K+ADFG + + H + + G +MAPE +
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS----QQSVHSVSGLLGNFQWMAPETIG 199
Query: 204 HGHLSV--KADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSL--EIVD 259
S KAD +SF +++ +++G+ F+ +++Y K + E +
Sbjct: 200 AEEESYTEKADTYSFAMILYTILTGE--GPFD---------EYSYGKIKFINMIREEGLR 248
Query: 260 PSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVVVMLSK 301
P++ D ++ I+ LC GDP+ RP +V LS+
Sbjct: 249 PTI-PEDCPPRLRNVIE---LCWSGDPKKRPHFSYIVKELSE 286
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 95/210 (45%), Gaps = 32/210 (15%)
Query: 47 SATKNFHPSNKLGEGGFGPVFK-GKLDDGREIAVKKLSHSS--NQGKKEFENEAKLLARV 103
S +++ +G G +G K + DG+ + K+L + S K+ +E LL +
Sbjct: 3 SRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL 62
Query: 104 QHRNVVN---------------LLGYCAHGAEKLLIY------EYVINESLDKVLFSLIK 142
+H N+V ++ YC G +I +Y+ E + +V+ L
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122
Query: 143 DIQILFRKK-------KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNG 195
++ R+ D+K +N+ LD K K+ DFG+AR+ D + T V GT
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-GTPY 181
Query: 196 YMAPEYVMHGHLSVKADVFSFGVVILELIS 225
YM+PE + + K+D++S G ++ EL +
Sbjct: 182 YMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 99/213 (46%), Gaps = 32/213 (15%)
Query: 42 FEALVSATKNFHPSNKLGEGGFGPVFKGKLD-DGREIAVKKLSH----SSNQG--KKEFE 94
F+++V ++ +LG G F V K + G+E A K + SS +G ++E E
Sbjct: 20 FQSMVE--DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIE 77
Query: 95 NEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLF---SLIKDIQILFRKK 151
E +L ++H N++ L + + +LI E V L L SL +D F K+
Sbjct: 78 REVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQ 137
Query: 152 --------------KTDIKASNILLDDKWIP----KIADFGMARLFPEDQTHVNTRVAGT 193
D+K NI+L DK +P K+ DFG+A N + GT
Sbjct: 138 ILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN--IFGT 195
Query: 194 NGYMAPEYVMHGHLSVKADVFSFGVVILELISG 226
++APE V + L ++AD++S GV+ L+SG
Sbjct: 196 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 86/211 (40%), Gaps = 35/211 (16%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLD------DGREIAVKKLSH-SSNQGKKEFENEAKLLAR 102
KN LG G FG V++G++ ++AVK L S Q + +F EA ++++
Sbjct: 22 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 81
Query: 103 VQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKV------------------LFSLIKDI 144
H+N+V +G + ++ E + L L + +DI
Sbjct: 82 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 141
Query: 145 QILFRKKKT------DIKASNILLDDKW---IPKIADFGMAR-LFPEDQTHVNTRVAGTN 194
+ + DI A N LL + KI DFGMAR ++
Sbjct: 142 ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 201
Query: 195 GYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
+M PE M G + K D +SFGV++ E+ S
Sbjct: 202 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 86/211 (40%), Gaps = 35/211 (16%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLD------DGREIAVKKLSH-SSNQGKKEFENEAKLLAR 102
KN LG G FG V++G++ ++AVK L S Q + +F EA ++++
Sbjct: 30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 89
Query: 103 VQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKV------------------LFSLIKDI 144
H+N+V +G + ++ E + L L + +DI
Sbjct: 90 FNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 149
Query: 145 QILFRKKKT------DIKASNILLDDKW---IPKIADFGMAR-LFPEDQTHVNTRVAGTN 194
+ + DI A N LL + KI DFGMAR ++
Sbjct: 150 ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 209
Query: 195 GYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
+M PE M G + K D +SFGV++ E+ S
Sbjct: 210 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 94/203 (46%), Gaps = 35/203 (17%)
Query: 58 LGEGGFGPVFKGKL--DDGR--EIAVK--KLSHSSNQGKKEFENEAKLLARVQHRNVVNL 111
LGEG FG V +G L +DG ++AVK KL +SS + +EF +EA + H NV+ L
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 112 LGYC----AHGAEKLLI----------YEYVINESLD--------KVLFSLIKDIQILFR 149
LG C + G K ++ + Y++ L+ + L + DI +
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 150 KKKT------DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN-GYMAPEYV 202
D+ A N +L D +ADFG+++ + R+A ++A E +
Sbjct: 162 YLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESL 221
Query: 203 MHGHLSVKADVFSFGVVILELIS 225
+ K+DV++FGV + E+ +
Sbjct: 222 ADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 96/205 (46%), Gaps = 32/205 (15%)
Query: 51 NFHPSNKLGEGGFGPVFKGKLD-DGREIAVK-----KLSHSSNQG--KKEFENEAKLLAR 102
++ +LG G F V K + G+E A K +LS SS +G ++E E E +L
Sbjct: 13 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLS-SSRRGVSREEIEREVNILRE 71
Query: 103 VQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLF---SLIKDIQILFRKK-------- 151
++H N++ L + + +LI E V L L SL +D F K+
Sbjct: 72 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYL 131
Query: 152 ------KTDIKASNILLDDKWIP----KIADFGMARLFPEDQTHVNTRVAGTNGYMAPEY 201
D+K NI+L DK +P K+ DFG+A N + GT ++APE
Sbjct: 132 HSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN--IFGTPEFVAPEI 189
Query: 202 VMHGHLSVKADVFSFGVVILELISG 226
V + L ++AD++S GV+ L+SG
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 27/216 (12%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLD-DGREIAVKKLS-HSSNQGKKEFE-NEAKLLARVQHR 106
+NF K+GEG +G V+K + G +A+KK+ + +G E LL + H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 107 NVVNLLGYCAHGAEKL-LIYEYVINE--------SLDKVLFSLIKD--IQIL-------- 147
N+V LL H KL L++E++ + +L + LIK Q+L
Sbjct: 70 NIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 148 FRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHG-H 206
R D+K N+L++ + K+ADFG+AR F T T Y APE ++ +
Sbjct: 129 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGCKY 187
Query: 207 LSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLL 242
S D++S G + E+++ R + F D + L
Sbjct: 188 YSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 221
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 27/216 (12%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLD-DGREIAVKKLS-HSSNQGKKEFE-NEAKLLARVQHR 106
+NF K+GEG +G V+K + G +A+KK+ + +G E LL + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 107 NVVNLLGYCAHGAEKL-LIYEYVINE--------SLDKVLFSLIKD--IQIL-------- 147
N+V LL H KL L++E++ + +L + LIK Q+L
Sbjct: 63 NIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 148 FRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVM-HGH 206
R D+K N+L++ + K+ADFG+AR F T T Y APE ++ +
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGXKY 180
Query: 207 LSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLL 242
S D++S G + E+++ R + F D + L
Sbjct: 181 YSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 214
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 92/203 (45%), Gaps = 30/203 (14%)
Query: 52 FHPSNKLGEGGFGPVFKGK-----LDDGREIAVKKLSHSSNQG--KKEFENEAKLLARVQ 104
+ +LG G F V K + L + K+ + SS +G +++ E E +L +Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 105 HRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLF---SLIKDIQILFRKK---------- 151
H NV+ L + + +LI E V L L SL ++ F K+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 152 ----KTDIKASNILLDDKWIPK----IADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVM 203
D+K NI+L D+ +PK I DFG+A N + GT ++APE V
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPAFVAPEIVN 190
Query: 204 HGHLSVKADVFSFGVVILELISG 226
+ L ++AD++S GV+ L+SG
Sbjct: 191 YEPLGLEADMWSIGVITYILLSG 213
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 96/205 (46%), Gaps = 32/205 (15%)
Query: 51 NFHPSNKLGEGGFGPVFKGKLD-DGREIAVK-----KLSHSSNQG--KKEFENEAKLLAR 102
++ +LG G F V K + G+E A K +LS SS +G ++E E E +L
Sbjct: 6 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLS-SSRRGVSREEIEREVNILRE 64
Query: 103 VQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLF---SLIKDIQILFRKK-------- 151
++H N++ L + + +LI E V L L SL +D F K+
Sbjct: 65 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYL 124
Query: 152 ------KTDIKASNILLDDKWIP----KIADFGMARLFPEDQTHVNTRVAGTNGYMAPEY 201
D+K NI+L DK +P K+ DFG+A N + GT ++APE
Sbjct: 125 HSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN--IFGTPEFVAPEI 182
Query: 202 VMHGHLSVKADVFSFGVVILELISG 226
V + L ++AD++S GV+ L+SG
Sbjct: 183 VNYEPLGLEADMWSIGVITYILLSG 207
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 29/219 (13%)
Query: 48 ATKNFHPSNKLGEGGFGPVFKGKLD-DGREIAVKKLS-HSSNQGKKEFE-NEAKLLARVQ 104
+ +NF K+GEG +G V+K + G +A+KK+ + +G E LL +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 105 HRNVVNLLGYCAHGAEKL-LIYEYVINESLDKV-----------------LFSLIKDIQI 146
H N+V LL H KL L++E+ +++ L K LF L++ +
Sbjct: 62 HPNIVKLLD-VIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 147 LF--RKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMH 204
R D+K N+L++ + K+ADFG+AR F T T Y APE ++
Sbjct: 120 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLG 178
Query: 205 G-HLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLL 242
+ S D++S G + E+++ R + F D + L
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 215
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 100/196 (51%), Gaps = 24/196 (12%)
Query: 57 KLGEGGFGPVFKGKLDDGR---EIAVKKLSHSSNQG-KKEFENEAKLLARVQHRNVVNLL 112
+LG G FG V +G + ++A+K L + + +E EA+++ ++ + +V L+
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 113 GYCAHGAEKLL--------IYEYVINE-------SLDKVLFSLIKDIQILFRKK--KTDI 155
G C A L+ ++++++ + ++ ++L + ++ L K D+
Sbjct: 77 GVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDL 136
Query: 156 KASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN--GYMAPEYVMHGHLSVKADV 213
A N+LL ++ KI+DFG+++ D ++ R AG + APE + S ++DV
Sbjct: 137 AARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDV 196
Query: 214 FSFGVVILELIS-GQR 228
+S+GV + E +S GQ+
Sbjct: 197 WSYGVTMWEALSYGQK 212
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 86/211 (40%), Gaps = 35/211 (16%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLD------DGREIAVKKLSH-SSNQGKKEFENEAKLLAR 102
KN LG G FG V++G++ ++AVK L S Q + +F EA ++++
Sbjct: 47 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 106
Query: 103 VQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKV------------------LFSLIKDI 144
H+N+V +G + ++ E + L L + +DI
Sbjct: 107 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 166
Query: 145 QILFRKKKT------DIKASNILLDDKW---IPKIADFGMAR-LFPEDQTHVNTRVAGTN 194
+ + DI A N LL + KI DFGMAR ++
Sbjct: 167 ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 226
Query: 195 GYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
+M PE M G + K D +SFGV++ E+ S
Sbjct: 227 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 86/211 (40%), Gaps = 35/211 (16%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLD------DGREIAVKKLSH-SSNQGKKEFENEAKLLAR 102
KN LG G FG V++G++ ++AVK L S Q + +F EA ++++
Sbjct: 30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 89
Query: 103 VQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKV------------------LFSLIKDI 144
H+N+V +G + ++ E + L L + +DI
Sbjct: 90 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 149
Query: 145 QILFRKKKT------DIKASNILLDDKW---IPKIADFGMAR-LFPEDQTHVNTRVAGTN 194
+ + DI A N LL + KI DFGMAR ++
Sbjct: 150 ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 209
Query: 195 GYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
+M PE M G + K D +SFGV++ E+ S
Sbjct: 210 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 27/216 (12%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLD-DGREIAVKKLS-HSSNQGKKEFE-NEAKLLARVQHR 106
+NF K+GEG +G V+K + G +A+KK+ + +G E LL + H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 107 NVVNLLGYCAHGAEKL-LIYEYVINE--------SLDKVLFSLIKD--IQIL-------- 147
N+V LL H KL L++E++ + +L + LIK Q+L
Sbjct: 67 NIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 148 FRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHG-H 206
R D+K N+L++ + K+ADFG+AR F T T Y APE ++ +
Sbjct: 126 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGCKY 184
Query: 207 LSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLL 242
S D++S G + E+++ R + F D + L
Sbjct: 185 YSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 218
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 86/211 (40%), Gaps = 35/211 (16%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLD------DGREIAVKKLSH-SSNQGKKEFENEAKLLAR 102
KN LG G FG V++G++ ++AVK L S Q + +F EA ++++
Sbjct: 45 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 104
Query: 103 VQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKV------------------LFSLIKDI 144
H+N+V +G + ++ E + L L + +DI
Sbjct: 105 FNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 164
Query: 145 QILFRKKKT------DIKASNILLDDKW---IPKIADFGMAR-LFPEDQTHVNTRVAGTN 194
+ + DI A N LL + KI DFGMAR ++
Sbjct: 165 ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 224
Query: 195 GYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
+M PE M G + K D +SFGV++ E+ S
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 86/211 (40%), Gaps = 35/211 (16%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLD------DGREIAVKKLSH-SSNQGKKEFENEAKLLAR 102
KN LG G FG V++G++ ++AVK L S Q + +F EA ++++
Sbjct: 31 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 90
Query: 103 VQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKV------------------LFSLIKDI 144
H+N+V +G + ++ E + L L + +DI
Sbjct: 91 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 150
Query: 145 QILFRKKKT------DIKASNILLDDKW---IPKIADFGMAR-LFPEDQTHVNTRVAGTN 194
+ + DI A N LL + KI DFGMAR ++
Sbjct: 151 ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 210
Query: 195 GYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
+M PE M G + K D +SFGV++ E+ S
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 29/217 (13%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLD-DGREIAVKKLS-HSSNQGKKEFE-NEAKLLARVQHR 106
+NF K+GEG +G V+K + G +A+KK+ + +G E LL + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 107 NVVNLLGYCAHGAEKL-LIYEYVINESLDKV-----------------LFSLIKDIQILF 148
N+V LL H KL L++E+ +++ L K LF L++ +
Sbjct: 63 NIVKLLD-VIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCH 120
Query: 149 --RKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHG- 205
R D+K N+L++ + K+ADFG+AR F T T Y APE ++
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 206 HLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLL 242
+ S D++S G + E+++ R + F D + L
Sbjct: 180 YYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 214
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 104/219 (47%), Gaps = 29/219 (13%)
Query: 48 ATKNFHPSNKLGEGGFGPVFKGKLD-DGREIAVKKLS-HSSNQGKKEFE-NEAKLLARVQ 104
+ +NF K+GEG +G V+K + G +A+KK+ + +G E LL +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 105 HRNVVNLLGYCAHGAEKL-LIYEYVINE--------SLDKVLFSLIKD--IQIL------ 147
H N+V LL H KL L++E+V + +L + LIK Q+L
Sbjct: 64 HPNIVKLLD-VIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 148 --FRKKKTDIKASNILLDDKWIPKIADFGMARLF-PEDQTHVNTRVAGTNGYMAPEYVMH 204
R D+K N+L++ + K+ADFG+AR F +T+ + V T Y APE ++
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLG 180
Query: 205 G-HLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLL 242
+ S D++S G + E+++ R + F D + L
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 217
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 29/217 (13%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLD-DGREIAVKKLS-HSSNQGKKEFE-NEAKLLARVQHR 106
+NF K+GEG +G V+K + G +A+KK+ + +G E LL + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 107 NVVNLLGYCAHGAEKL-LIYEYVINESLDKV-----------------LFSLIKDIQILF 148
N+V LL H KL L++E+ +++ L K LF L++ +
Sbjct: 63 NIVKLLD-VIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 149 --RKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHG- 205
R D+K N+L++ + K+ADFG+AR F T T Y APE ++
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 206 HLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLL 242
+ S D++S G + E+++ R + F D + L
Sbjct: 180 YYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 214
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 29/217 (13%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLD-DGREIAVKKLS-HSSNQGKKEFE-NEAKLLARVQHR 106
+NF K+GEG +G V+K + G +A+KK+ + +G E LL + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 107 NVVNLLGYCAHGAEKL-LIYEYVINESLDKV-----------------LFSLIKDIQILF 148
N+V LL H KL L++E+ +++ L K LF L++ +
Sbjct: 62 NIVKLLD-VIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 149 --RKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHG- 205
R D+K N+L++ + K+ADFG+AR F T T Y APE ++
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 206 HLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLL 242
+ S D++S G + E+++ R + F D + L
Sbjct: 179 YYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 213
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 29/217 (13%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLD-DGREIAVKKLS-HSSNQGKKEFE-NEAKLLARVQHR 106
+NF K+GEG +G V+K + G +A+KK+ + +G E LL + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 107 NVVNLLGYCAHGAEKL-LIYEYVINESLDKV-----------------LFSLIKDIQILF 148
N+V LL H KL L++E+ +++ L K LF L++ +
Sbjct: 62 NIVKLLD-VIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 149 --RKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHG- 205
R D+K N+L++ + K+ADFG+AR F T T Y APE ++
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 206 HLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLL 242
+ S D++S G + E+++ R + F D + L
Sbjct: 179 YYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 213
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 29/217 (13%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLD-DGREIAVKKLS-HSSNQGKKEFE-NEAKLLARVQHR 106
+NF K+GEG +G V+K + G +A+KK+ + +G E LL + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 107 NVVNLLGYCAHGAEKL-LIYEYVINESLDKV-----------------LFSLIKDIQILF 148
N+V LL H KL L++E+ +++ L K LF L++ +
Sbjct: 63 NIVKLLD-VIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 149 --RKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHG- 205
R D+K N+L++ + K+ADFG+AR F T T Y APE ++
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 206 HLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLL 242
+ S D++S G + E+++ R + F D + L
Sbjct: 180 YYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 214
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 86/211 (40%), Gaps = 35/211 (16%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLD------DGREIAVKKLSH-SSNQGKKEFENEAKLLAR 102
KN LG G FG V++G++ ++AVK L S Q + +F EA ++++
Sbjct: 37 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 96
Query: 103 VQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKV------------------LFSLIKDI 144
H+N+V +G + ++ E + L L + +DI
Sbjct: 97 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 156
Query: 145 QILFRKKKT------DIKASNILLDDKW---IPKIADFGMAR-LFPEDQTHVNTRVAGTN 194
+ + DI A N LL + KI DFGMAR ++
Sbjct: 157 ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 216
Query: 195 GYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
+M PE M G + K D +SFGV++ E+ S
Sbjct: 217 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 86/211 (40%), Gaps = 35/211 (16%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLD------DGREIAVKKLSH-SSNQGKKEFENEAKLLAR 102
KN LG G FG V++G++ ++AVK L S Q + +F EA ++++
Sbjct: 57 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 116
Query: 103 VQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKV------------------LFSLIKDI 144
H+N+V +G + ++ E + L L + +DI
Sbjct: 117 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 176
Query: 145 QILFRKKKT------DIKASNILLDDKW---IPKIADFGMAR-LFPEDQTHVNTRVAGTN 194
+ + DI A N LL + KI DFGMAR ++
Sbjct: 177 ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 236
Query: 195 GYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
+M PE M G + K D +SFGV++ E+ S
Sbjct: 237 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 106/270 (39%), Gaps = 41/270 (15%)
Query: 48 ATKNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFEN----EAKLLARV 103
A ++F LG+G FG V+ + + I K+ + K E+ E ++ + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 104 QHRNVVNLLGYCAHGAEKLLIYEY----VINESLDKV-----------LFSLIKDIQILF 148
+H N++ L GY LI EY + L K+ + L +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 149 RKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
K+ DIK N+LL KIA+FG + P + T + GT Y+ PE +
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR---RTTLCGTLDYLPPEMIEGRM 185
Query: 207 LSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASD 266
K D++S GV+ E + G+ N + YK+ +E P
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----------YKRISRVEFTFPDFVTEG 235
Query: 267 SGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
+ D I+ + + +P RP +R V+
Sbjct: 236 ARDLISRLL-------KHNPSQRPMLREVL 258
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 84/196 (42%), Gaps = 30/196 (15%)
Query: 56 NKLGEGGFGPVFKGKLDDGRE-IAVKK--LSHSSNQGKKEFENEAKLLARVQHRNVVNLL 112
KLGEG +G V+K E +A+K+ L H E LL +QHRN++ L
Sbjct: 40 TKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELK 99
Query: 113 GYCAHGAEKLLIYEYVINE---SLDK-----------VLFSLIKDIQILFRKK--KTDIK 156
H LI+EY N+ +DK L+ LI + ++ D+K
Sbjct: 100 SVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLK 159
Query: 157 ASNILL-----DDKWIPKIADFGMARLF--PEDQTHVNTRVAGTNGYMAPEYVMHG-HLS 208
N+LL + + KI DFG+AR F P Q T T Y PE ++ H S
Sbjct: 160 PQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQF---THEIITLWYRPPEILLGSRHYS 216
Query: 209 VKADVFSFGVVILELI 224
D++S + E++
Sbjct: 217 TSVDIWSIACIWAEML 232
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 86/211 (40%), Gaps = 35/211 (16%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLD------DGREIAVKKLSH-SSNQGKKEFENEAKLLAR 102
KN LG G FG V++G++ ++AVK L S Q + +F EA ++++
Sbjct: 48 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 107
Query: 103 VQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKV------------------LFSLIKDI 144
H+N+V +G + ++ E + L L + +DI
Sbjct: 108 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 167
Query: 145 QILFRKKKT------DIKASNILLDDKW---IPKIADFGMAR-LFPEDQTHVNTRVAGTN 194
+ + DI A N LL + KI DFGMAR ++
Sbjct: 168 ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPV 227
Query: 195 GYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
+M PE M G + K D +SFGV++ E+ S
Sbjct: 228 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 87/196 (44%), Gaps = 28/196 (14%)
Query: 58 LGEGGFGPVFKGKLD-----DGREIAVKKLS-HSSNQGKKEFENEAKLLARVQHRNVVNL 111
LGEG FG V + D G ++AVK L S + + E ++L + H N+V
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 112 LGYCAH--GAEKLLIYEYVINESLDKVL----------------FSLIKDIQILFRKKKT 153
G C G LI E++ + SL + L + K + L ++
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYV 136
Query: 154 --DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNG--YMAPEYVMHGHLSV 209
D+ A N+L++ + KI DFG+ + D+ + + + APE +M +
Sbjct: 137 HRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYI 196
Query: 210 KADVFSFGVVILELIS 225
+DV+SFGV + EL++
Sbjct: 197 ASDVWSFGVTLHELLT 212
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 94/197 (47%), Gaps = 26/197 (13%)
Query: 57 KLGEGGFGPVFKGKLDDGR---EIAVKKLSHSSNQG-KKEFENEAKLLARVQHRNVVNLL 112
+LG G FG V +G + ++A+K L + + +E EA+++ ++ + +V L+
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 113 GYCAHGAEKLLIYEYVINESLDKVLFSLIKDIQI-----LFRKKKTDIK----------- 156
G C A +L+ E L K L ++I + L + +K
Sbjct: 403 GVCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRN 461
Query: 157 --ASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN--GYMAPEYVMHGHLSVKAD 212
A N+LL ++ KI+DFG+++ D ++ R AG + APE + S ++D
Sbjct: 462 LAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSD 521
Query: 213 VFSFGVVILELIS-GQR 228
V+S+GV + E +S GQ+
Sbjct: 522 VWSYGVTMWEALSYGQK 538
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 86/211 (40%), Gaps = 35/211 (16%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLD------DGREIAVKKLSH-SSNQGKKEFENEAKLLAR 102
KN LG G FG V++G++ ++AVK L S Q + +F EA ++++
Sbjct: 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 130
Query: 103 VQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKV------------------LFSLIKDI 144
H+N+V +G + ++ E + L L + +DI
Sbjct: 131 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 190
Query: 145 QILFRKKKT------DIKASNILLDDKW---IPKIADFGMAR-LFPEDQTHVNTRVAGTN 194
+ + DI A N LL + KI DFGMAR ++
Sbjct: 191 ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPV 250
Query: 195 GYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
+M PE M G + K D +SFGV++ E+ S
Sbjct: 251 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 87/196 (44%), Gaps = 28/196 (14%)
Query: 58 LGEGGFGPVFKGKLD-----DGREIAVKKLS-HSSNQGKKEFENEAKLLARVQHRNVVNL 111
LGEG FG V + D G ++AVK L S + + E ++L + H N+V
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 112 LGYCAH--GAEKLLIYEYVINESLDKVL----------------FSLIKDIQILFRKKKT 153
G C G LI E++ + SL + L + K + L ++
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYV 148
Query: 154 --DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNG--YMAPEYVMHGHLSV 209
D+ A N+L++ + KI DFG+ + D+ + + + APE +M +
Sbjct: 149 HRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYI 208
Query: 210 KADVFSFGVVILELIS 225
+DV+SFGV + EL++
Sbjct: 209 ASDVWSFGVTLHELLT 224
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 84/194 (43%), Gaps = 23/194 (11%)
Query: 56 NKLGEGGFGPVFKGKLDD--GREIAVKKL---SHSSNQGKKEFENEAKLLARVQHRNVVN 110
+KLG GG V+ + D ++A+K + + K FE E +++ H+N+V+
Sbjct: 17 DKLGGGGMSTVYLAE-DTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS 75
Query: 111 LLGYCAHGAEKLLIYEYVINESLDKVLFS---LIKDIQILF--------------RKKKT 153
++ L+ EY+ +L + + S L D I F R
Sbjct: 76 MIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHR 135
Query: 154 DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADV 213
DIK NIL+D KI DFG+A+ E V GT Y +PE D+
Sbjct: 136 DIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDI 195
Query: 214 FSFGVVILELISGQ 227
+S G+V+ E++ G+
Sbjct: 196 YSIGIVLYEMLVGE 209
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 105/221 (47%), Gaps = 29/221 (13%)
Query: 46 VSATKNFHPSNKLGEGGFGPVFKGKLD-DGREIAVKKLS-HSSNQGKKEFE-NEAKLLAR 102
+ + +NF K+GEG +G V+K + G +A+KK+ + +G E LL
Sbjct: 3 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 62
Query: 103 VQHRNVVNLLGYCAHGAEKL-LIYEYVINE--------SLDKVLFSLIKD--IQIL---- 147
+ H N+V LL H KL L++E++ + +L + LIK Q+L
Sbjct: 63 LNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 121
Query: 148 ----FRKKKTDIKASNILLDDKWIPKIADFGMARLF-PEDQTHVNTRVAGTNGYMAPEYV 202
R D+K N+L++ + K+ADFG+AR F +T+ + V T Y APE +
Sbjct: 122 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEIL 179
Query: 203 MHG-HLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLL 242
+ + S D++S G + E+++ R + F D + L
Sbjct: 180 LGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 218
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 106/270 (39%), Gaps = 41/270 (15%)
Query: 48 ATKNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFEN----EAKLLARV 103
A ++F LG+G FG V+ + + I K+ + K E+ E ++ + +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 104 QHRNVVNLLGYCAHGAEKLLIYEY----VINESLDKV-----------LFSLIKDIQILF 148
+H N++ L GY LI EY + L K+ + L +
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 127
Query: 149 RKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
K+ DIK N+LL KIA+FG + P + T + GT Y+ PE +
Sbjct: 128 SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR---RTTLCGTLDYLPPEMIEGRM 184
Query: 207 LSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASD 266
K D++S GV+ E + G+ N + YK+ +E P
Sbjct: 185 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----------YKRISRVEFTFPDFVTEG 234
Query: 267 SGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
+ D I+ + + +P RP +R V+
Sbjct: 235 ARDLISRLL-------KHNPSQRPMLREVL 257
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 105/221 (47%), Gaps = 29/221 (13%)
Query: 46 VSATKNFHPSNKLGEGGFGPVFKGKLD-DGREIAVKKLS-HSSNQGKKEFE-NEAKLLAR 102
+ + +NF K+GEG +G V+K + G +A+KK+ + +G E LL
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 103 VQHRNVVNLLGYCAHGAEKL-LIYEYVINE--------SLDKVLFSLIKD--IQIL---- 147
+ H N+V LL H KL L++E++ + +L + LIK Q+L
Sbjct: 62 LNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 148 ----FRKKKTDIKASNILLDDKWIPKIADFGMARLF-PEDQTHVNTRVAGTNGYMAPEYV 202
R D+K N+L++ + K+ADFG+AR F +T+ + V T Y APE +
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEIL 178
Query: 203 MHG-HLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLL 242
+ + S D++S G + E+++ R + F D + L
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 217
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 105/270 (38%), Gaps = 41/270 (15%)
Query: 48 ATKNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFEN----EAKLLARV 103
A ++F LG+G FG V+ + + I K+ + K E+ E ++ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 104 QHRNVVNLLGYCAHGAEKLLIYEY----VINESLDKV-----------LFSLIKDIQILF 148
+H N++ L GY LI EY + L K+ + L +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 149 RKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
K+ DIK N+LL KIADFG + P + + GT Y+ PE +
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLCGTLDYLPPEMIEGRM 182
Query: 207 LSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASD 266
K D++S GV+ E + G+ N + YK+ +E P
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----------YKRISRVEFTFPDFVTEG 232
Query: 267 SGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
+ D I+ + + +P RP +R V+
Sbjct: 233 ARDLISRLL-------KHNPSQRPMLREVL 255
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 87/198 (43%), Gaps = 33/198 (16%)
Query: 58 LGEGGFGPVFKGK-LDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
LG+G +G V+ G+ L + IA+K++ ++ + E L ++H+N+V LG +
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 117 HGAEKLLIYEYVINESLDKVLFS------------------------LIKDIQILFRKKK 152
+ E V SL +L S + D QI+ R
Sbjct: 90 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHR--- 146
Query: 153 TDIKASNILLDD-KWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHG--HLSV 209
DIK N+L++ + KI+DFG ++ T GT YMAPE + G
Sbjct: 147 -DIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET-FTGTLQYMAPEIIDKGPRGYGK 204
Query: 210 KADVFSFGVVILELISGQ 227
AD++S G I+E+ +G+
Sbjct: 205 AADIWSLGCTIIEMATGK 222
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 96/223 (43%), Gaps = 33/223 (14%)
Query: 48 ATKNFHPSNKLGEGGFGPVFKGK-LDDGREIAVKKLSHSSNQGKKEFEN--EAKLLARVQ 104
AT + P ++G G +G V+K + G +A+K + + + E LL R++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 105 ---HRNVVNLLGYCAHG-----AEKLLIYEYV---INESLDK-----VLFSLIKDIQILF 148
H NVV L+ CA + L++E+V + LDK + IKD+ F
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 149 RKK----------KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMA 198
+ D+K NIL+ K+ADFG+AR++ V T Y A
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVV--TLWYRA 179
Query: 199 PEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNL 241
PE ++ + D++S G + E+ +R F + +A L
Sbjct: 180 PEVLLQSTYATPVDMWSVGCIFAEMF--RRKPLFCGNSEADQL 220
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 105/221 (47%), Gaps = 29/221 (13%)
Query: 46 VSATKNFHPSNKLGEGGFGPVFKGKLD-DGREIAVKKLS-HSSNQGKKEFE-NEAKLLAR 102
+ + +NF K+GEG +G V+K + G +A+KK+ + +G E LL
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 103 VQHRNVVNLLGYCAHGAEKL-LIYEYV---INESLD-------------KVLFSLIKDIQ 145
+ H N+V LL H KL L++E++ + + +D LF L++ +
Sbjct: 62 LNHPNIVKLLD-VIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 146 ILF--RKKKTDIKASNILLDDKWIPKIADFGMARLF-PEDQTHVNTRVAGTNGYMAPEYV 202
R D+K N+L++ + K+ADFG+AR F +T+ + V T Y APE +
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEIL 178
Query: 203 MHG-HLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLL 242
+ + S D++S G + E+++ R + F D + L
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 217
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 29/219 (13%)
Query: 48 ATKNFHPSNKLGEGGFGPVFKGKLD-DGREIAVKKLS-HSSNQGKKEFE-NEAKLLARVQ 104
+ +NF K+GEG +G V+K + G +A+KK+ + +G E LL +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 105 HRNVVNLLGYCAHGAEKL-LIYEYVINE--------SLDKVLFSLIKD--IQIL------ 147
H N+V LL H KL L++E++ + +L + LIK Q+L
Sbjct: 64 HPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 148 --FRKKKTDIKASNILLDDKWIPKIADFGMARLF-PEDQTHVNTRVAGTNGYMAPEYVMH 204
R D+K N+L++ + K+ADFG+AR F +T+ + V T Y APE ++
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLG 180
Query: 205 G-HLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLL 242
+ S D++S G + E+++ R + F D + L
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 217
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 29/219 (13%)
Query: 48 ATKNFHPSNKLGEGGFGPVFKGKLD-DGREIAVKKLS-HSSNQGKKEFE-NEAKLLARVQ 104
+ +NF K+GEG +G V+K + G +A+KK+ + +G E LL +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 105 HRNVVNLLGYCAHGAEKL-LIYEYVINE--------SLDKVLFSLIKD--IQIL------ 147
H N+V LL H KL L++E++ + +L + LIK Q+L
Sbjct: 64 HPNIVKLLD-VIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 148 --FRKKKTDIKASNILLDDKWIPKIADFGMARLF-PEDQTHVNTRVAGTNGYMAPEYVMH 204
R D+K N+L++ + K+ADFG+AR F +T+ + V T Y APE ++
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLG 180
Query: 205 G-HLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLL 242
+ S D++S G + E+++ R + F D + L
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 217
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 31/220 (14%)
Query: 48 ATKNFHPSNKLGEGGFGPVFKGKLD-DGREIAVKKLS-HSSNQGKKEFE-NEAKLLARVQ 104
+ +NF K+GEG +G V+K + G +A+KK+ + +G E LL +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 105 HRNVVNLLGYCAHGAEKL-LIYEYVINESLDKV-----------------LFSLIKDIQI 146
H N+V LL H KL L++E+ +++ L K LF L++ +
Sbjct: 61 HPNIVKLLD-VIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 147 LF--RKKKTDIKASNILLDDKWIPKIADFGMARLF-PEDQTHVNTRVAGTNGYMAPEYVM 203
R D+K N+L++ + K+ADFG+AR F +T+ + V T Y APE ++
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 176
Query: 204 HG-HLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLL 242
+ S D++S G + E+++ R + F D + L
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 214
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 131/282 (46%), Gaps = 58/282 (20%)
Query: 57 KLGEGGFGPVFKGKL-DDGREIAVKKLSHSSNQGK-------KEFENEAKLLARVQHRNV 108
++G+GGFG V KG+L D +A+K L ++G+ +EF+ E +++ + H N+
Sbjct: 26 QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 109 VNLLGYCAHGAEKLLIYEYV-----INESLDK-------VLFSLIKDIQILFRKKKT--- 153
V L G H ++++ E+V + LDK V L+ DI + +
Sbjct: 86 VKLYG-LMHNPPRMVM-EFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNP 143
Query: 154 -----DIKASNILLD--DKWIP---KIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVM 203
D+++ NI L D+ P K+ADF ++ + H + + G +MAPE +
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS----QQSVHSVSGLLGNFQWMAPETIG 199
Query: 204 HGHLSV--KADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSL--EIVD 259
S KAD +SF +++ +++G+ F+ +++Y K + E +
Sbjct: 200 AEEESYTEKADTYSFAMILYTILTGE--GPFD---------EYSYGKIKFINMIREEGLR 248
Query: 260 PSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVVVMLSK 301
P++ D ++ I+ LC GDP+ RP +V LS+
Sbjct: 249 PTI-PEDCPPRLRNVIE---LCWSGDPKKRPHFSYIVKELSE 286
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 29/219 (13%)
Query: 48 ATKNFHPSNKLGEGGFGPVFKGKLD-DGREIAVKKLS-HSSNQGKKEFE-NEAKLLARVQ 104
+ +NF K+GEG +G V+K + G +A+KK+ + +G E LL +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 105 HRNVVNLLGYCAHGAEKL-LIYEYVINE--------SLDKVLFSLIKD--IQIL------ 147
H N+V LL H KL L++E++ + +L + LIK Q+L
Sbjct: 63 HPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 148 --FRKKKTDIKASNILLDDKWIPKIADFGMARLF-PEDQTHVNTRVAGTNGYMAPEYVMH 204
R D+K N+L++ + K+ADFG+AR F +T+ + V T Y APE ++
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLG 179
Query: 205 G-HLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLL 242
+ S D++S G + E+++ R + F D + L
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 216
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 27/196 (13%)
Query: 58 LGEGGFGPVFKG--KLDDGREIAVKKLSHSSNQGK-KEFENEAKLLARVQHRNVVNLLGY 114
+GEG +G V L+ R +A+KK+S +Q + E K+L R +H N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 87
Query: 115 CAHGAEKLLIYEYVINESLDKVLFSLIKD------------IQILFRKKKT--------D 154
+ + Y++ + ++ L+ L+K QIL K D
Sbjct: 88 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRD 147
Query: 155 IKASNILLDDKWIPKIADFGMARLFPEDQTHVN--TRVAGTNGYMAPEYVMHGHLSVKA- 211
+K SN+LL+ KI DFG+AR+ D H T T Y APE +++ K+
Sbjct: 148 LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 207
Query: 212 DVFSFGVVILELISGQ 227
D++S G ++ E++S +
Sbjct: 208 DIWSVGCILAEMLSNR 223
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 29/219 (13%)
Query: 48 ATKNFHPSNKLGEGGFGPVFKGKLD-DGREIAVKKLS-HSSNQGKKEFE-NEAKLLARVQ 104
+ +NF K+GEG +G V+K + G +A+KK+ + +G E LL +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 105 HRNVVNLLGYCAHGAEKL-LIYEYVINE--------SLDKVLFSLIKD--IQIL------ 147
H N+V LL H KL L++E++ + +L + LIK Q+L
Sbjct: 63 HPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 148 --FRKKKTDIKASNILLDDKWIPKIADFGMARLF-PEDQTHVNTRVAGTNGYMAPEYVMH 204
R D+K N+L++ + K+ADFG+AR F +T+ + V T Y APE ++
Sbjct: 122 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLG 179
Query: 205 G-HLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLL 242
+ S D++S G + E+++ R + F D + L
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 216
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 27/196 (13%)
Query: 58 LGEGGFGPVFKG--KLDDGREIAVKKLSHSSNQGK-KEFENEAKLLARVQHRNVVNLLGY 114
+GEG +G V L+ R +A+KK+S +Q + E K+L R +H N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 94
Query: 115 CAHGAEKLLIYEYVINESLDKVLFSLIKD------------IQILFRKKKT--------D 154
+ + Y++ + ++ L+ L+K QIL K D
Sbjct: 95 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRD 154
Query: 155 IKASNILLDDKWIPKIADFGMARLFPEDQTHVN--TRVAGTNGYMAPEYVMHGHLSVKA- 211
+K SN+LL+ KI DFG+AR+ D H T T Y APE +++ K+
Sbjct: 155 LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 214
Query: 212 DVFSFGVVILELISGQ 227
D++S G ++ E++S +
Sbjct: 215 DIWSVGCILAEMLSNR 230
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 106/270 (39%), Gaps = 41/270 (15%)
Query: 48 ATKNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFEN----EAKLLARV 103
A ++F LG+G FG V+ + + I K+ + K E+ E ++ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 104 QHRNVVNLLGYCAHGAEKLLIYEY----VINESLDKV-----------LFSLIKDIQILF 148
+H N++ L GY LI EY + L K+ + L +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 149 RKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
K+ DIK N+LL KIADFG + P + + GT Y+ PE +
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RAALCGTLDYLPPEMIEGRM 182
Query: 207 LSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASD 266
K D++S GV+ E + G+ F + + YK+ +E P
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGK--PPFEANTYQET--------YKRISRVEFTFPDFVTEG 232
Query: 267 SGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
+ D I+ + + +P RP +R V+
Sbjct: 233 ARDLISRLL-------KHNPSQRPMLREVL 255
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 27/196 (13%)
Query: 58 LGEGGFGPVFKG--KLDDGREIAVKKLSHSSNQGK-KEFENEAKLLARVQHRNVVNLLGY 114
+GEG +G V L+ R +A+KK+S +Q + E K+L R +H N++ +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 95
Query: 115 CAHGAEKLLIYEYVINESLDKVLFSLIKD------------IQILFRKKKT--------D 154
+ + Y++ + ++ L+ L+K QIL K D
Sbjct: 96 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRD 155
Query: 155 IKASNILLDDKWIPKIADFGMARLFPEDQTHVN--TRVAGTNGYMAPEYVMHGHLSVKA- 211
+K SN+LL+ KI DFG+AR+ D H T T Y APE +++ K+
Sbjct: 156 LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 215
Query: 212 DVFSFGVVILELISGQ 227
D++S G ++ E++S +
Sbjct: 216 DIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 27/196 (13%)
Query: 58 LGEGGFGPVFKG--KLDDGREIAVKKLSHSSNQGK-KEFENEAKLLARVQHRNVVNLLGY 114
+GEG +G V L+ R +A+KK+S +Q + E K+L R +H N++ +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 86
Query: 115 CAHGAEKLLIYEYVINESLDKVLFSLIKD------------IQILFRKKKT--------D 154
+ + Y++ + ++ L+ L+K QIL K D
Sbjct: 87 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRD 146
Query: 155 IKASNILLDDKWIPKIADFGMARLFPEDQTHVN--TRVAGTNGYMAPEYVMHGHLSVKA- 211
+K SN+LL+ KI DFG+AR+ D H T T Y APE +++ K+
Sbjct: 147 LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 206
Query: 212 DVFSFGVVILELISGQ 227
D++S G ++ E++S +
Sbjct: 207 DIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 27/196 (13%)
Query: 58 LGEGGFGPVFKG--KLDDGREIAVKKLSHSSNQGK-KEFENEAKLLARVQHRNVVNLLGY 114
+GEG +G V L+ R +A+KK+S +Q + E K+L R +H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 93
Query: 115 CAHGAEKLLIYEYVINESLDKVLFSLIKD------------IQILFRKKKT--------D 154
+ + Y++ + ++ L+ L+K QIL K D
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRD 153
Query: 155 IKASNILLDDKWIPKIADFGMARLFPEDQTHVN--TRVAGTNGYMAPEYVMHGHLSVKA- 211
+K SN+LL+ KI DFG+AR+ D H T T Y APE +++ K+
Sbjct: 154 LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 213
Query: 212 DVFSFGVVILELISGQ 227
D++S G ++ E++S +
Sbjct: 214 DIWSVGCILAEMLSNR 229
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 29/219 (13%)
Query: 48 ATKNFHPSNKLGEGGFGPVFKGKLD-DGREIAVKKLS-HSSNQGKKEFE-NEAKLLARVQ 104
+ +NF K+GEG +G V+K + G +A+KK+ + +G E LL +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 105 HRNVVNLLGYCAHGAEKL-LIYEYVINE--------SLDKVLFSLIKD--IQIL------ 147
H N+V LL H KL L++E++ + +L + LIK Q+L
Sbjct: 63 HPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 148 --FRKKKTDIKASNILLDDKWIPKIADFGMARLF-PEDQTHVNTRVAGTNGYMAPEYVMH 204
R D+K N+L++ + K+ADFG+AR F +T+ + V T Y APE ++
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLG 179
Query: 205 G-HLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLL 242
+ S D++S G + E+++ R + F D + L
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 216
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 105/221 (47%), Gaps = 29/221 (13%)
Query: 46 VSATKNFHPSNKLGEGGFGPVFKGKLD-DGREIAVKKLS-HSSNQGKKEFE-NEAKLLAR 102
+ + +NF K+GEG +G V+K + G +A+KK+ + +G E LL
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 103 VQHRNVVNLLGYCAHGAEKL-LIYEYVINE--------SLDKVLFSLIKD--IQIL---- 147
+ H N+V LL H KL L++E++ + +L + LIK Q+L
Sbjct: 62 LNHPNIVKLLD-VIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 148 ----FRKKKTDIKASNILLDDKWIPKIADFGMARLF-PEDQTHVNTRVAGTNGYMAPEYV 202
R D+K N+L++ + K+ADFG+AR F +T+ + V T Y APE +
Sbjct: 121 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEIL 178
Query: 203 MHG-HLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLL 242
+ + S D++S G + E+++ R + F D + L
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 217
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 105/270 (38%), Gaps = 41/270 (15%)
Query: 48 ATKNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFEN----EAKLLARV 103
A ++F LG+G FG V+ + + I K+ + K E+ E ++ + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 104 QHRNVVNLLGYCAHGAEKLLIYEY----VINESLDKV-----------LFSLIKDIQILF 148
+H N++ L GY LI EY + L K+ + L +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 149 RKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
K+ DIK N+LL KIADFG + P + + GT Y+ PE +
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLCGTLDYLPPEMIEGRM 185
Query: 207 LSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASD 266
K D++S GV+ E + G+ N + YK+ +E P
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----------YKRISRVEFTFPDFVTEG 235
Query: 267 SGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
+ D I+ + + +P RP +R V+
Sbjct: 236 ARDLISRLL-------KHNPSQRPMLREVL 258
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 27/196 (13%)
Query: 58 LGEGGFGPVFKG--KLDDGREIAVKKLSHSSNQGK-KEFENEAKLLARVQHRNVVNLLGY 114
+GEG +G V L+ R +A+KK+S +Q + E K+L R +H N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 87
Query: 115 CAHGAEKLLIYEYVINESLDKVLFSLIKD------------IQILFRKKKT--------D 154
+ + Y++ + ++ L+ L+K QIL K D
Sbjct: 88 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRD 147
Query: 155 IKASNILLDDKWIPKIADFGMARLFPEDQTHVN--TRVAGTNGYMAPEYVMHGHLSVKA- 211
+K SN+LL+ KI DFG+AR+ D H T T Y APE +++ K+
Sbjct: 148 LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 207
Query: 212 DVFSFGVVILELISGQ 227
D++S G ++ E++S +
Sbjct: 208 DIWSVGCILAEMLSNR 223
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 105/221 (47%), Gaps = 29/221 (13%)
Query: 46 VSATKNFHPSNKLGEGGFGPVFKGKLD-DGREIAVKKLS-HSSNQGKKEFE-NEAKLLAR 102
+ + +NF K+GEG +G V+K + G +A+KK+ + +G E LL
Sbjct: 1 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 60
Query: 103 VQHRNVVNLLGYCAHGAEKL-LIYEYV---INESLD-------------KVLFSLIKDIQ 145
+ H N+V LL H KL L++E++ + + +D LF L++ +
Sbjct: 61 LNHPNIVKLLD-VIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 146 ILF--RKKKTDIKASNILLDDKWIPKIADFGMARLF-PEDQTHVNTRVAGTNGYMAPEYV 202
R D+K N+L++ + K+ADFG+AR F +T+ + V T Y APE +
Sbjct: 120 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEIL 177
Query: 203 MHG-HLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLL 242
+ + S D++S G + E+++ R + F D + L
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 216
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 90/195 (46%), Gaps = 25/195 (12%)
Query: 58 LGEGGFGPVFKGKLDDGR-EIAVKKLSHSSNQGK-KEFENEAKLLARVQHRNVVNLLGYC 115
+GEG +G V + + +A+KK+S +Q + E K+L R +H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 92
Query: 116 AHGAEKLLIYEYVINESLDKVLFSLIKD------------IQILFRKKKT--------DI 155
+ + Y++ + ++ L+ L+K QIL K D+
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 152
Query: 156 KASNILLDDKWIPKIADFGMARLFPEDQTHVN--TRVAGTNGYMAPEYVMHGHLSVKA-D 212
K SN+LL+ KI DFG+AR+ D H T T Y APE +++ K+ D
Sbjct: 153 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 212
Query: 213 VFSFGVVILELISGQ 227
++S G ++ E++S +
Sbjct: 213 IWSVGCILAEMLSNR 227
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 86/211 (40%), Gaps = 35/211 (16%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLD------DGREIAVKKLSH-SSNQGKKEFENEAKLLAR 102
KN LG G FG V++G++ ++AVK L S Q + +F EA ++++
Sbjct: 45 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISK 104
Query: 103 VQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKV------------------LFSLIKDI 144
H+N+V +G + ++ E + L L + +DI
Sbjct: 105 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 164
Query: 145 QILFRKKKT------DIKASNILLDDKW---IPKIADFGMAR-LFPEDQTHVNTRVAGTN 194
+ + DI A N LL + KI DFGMAR ++
Sbjct: 165 ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 224
Query: 195 GYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
+M PE M G + K D +SFGV++ E+ S
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 90/195 (46%), Gaps = 25/195 (12%)
Query: 58 LGEGGFGPVFKGKLDDGR-EIAVKKLSHSSNQGK-KEFENEAKLLARVQHRNVVNLLGYC 115
+GEG +G V + + +A+KK+S +Q + E K+L R +H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 116 AHGAEKLLIYEYVINESLDKVLFSLIKD------------IQILFRKKKT--------DI 155
+ + Y++ + ++ L+ L+K QIL K D+
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 150
Query: 156 KASNILLDDKWIPKIADFGMARLFPEDQTHVN--TRVAGTNGYMAPEYVMHGHLSVKA-D 212
K SN+LL+ KI DFG+AR+ D H T T Y APE +++ K+ D
Sbjct: 151 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 210
Query: 213 VFSFGVVILELISGQ 227
++S G ++ E++S +
Sbjct: 211 IWSVGCILAEMLSNR 225
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 31/220 (14%)
Query: 48 ATKNFHPSNKLGEGGFGPVFKGKLD-DGREIAVKKLS-HSSNQGKKEFE-NEAKLLARVQ 104
+ +NF K+GEG +G V+K + G +A+KK+ + +G E LL +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 105 HRNVVNLLGYCAHGAEKL-LIYEYVINESLDKV-----------------LFSLIKDIQI 146
H N+V LL H KL L++E+ +++ L K LF L++ +
Sbjct: 62 HPNIVKLLD-VIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 147 LF--RKKKTDIKASNILLDDKWIPKIADFGMARLF-PEDQTHVNTRVAGTNGYMAPEYVM 203
R D+K N+L++ + K+ADFG+AR F +T+ + V T Y APE ++
Sbjct: 120 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 177
Query: 204 HG-HLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLL 242
+ S D++S G + E+++ R + F D + L
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 215
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 31/220 (14%)
Query: 48 ATKNFHPSNKLGEGGFGPVFKGKLD-DGREIAVKKLS-HSSNQGKKEFE-NEAKLLARVQ 104
+ +NF K+GEG +G V+K + G +A+KK+ + +G E LL +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 105 HRNVVNLLGYCAHGAEKL-LIYEYVINESLDKV-----------------LFSLIKDIQI 146
H N+V LL H KL L++E+ +++ L K LF L++ +
Sbjct: 61 HPNIVKLLD-VIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 147 LF--RKKKTDIKASNILLDDKWIPKIADFGMARLF-PEDQTHVNTRVAGTNGYMAPEYVM 203
R D+K N+L++ + K+ADFG+AR F +T+ + V T Y APE ++
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 176
Query: 204 HG-HLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLL 242
+ S D++S G + E+++ R + F D + L
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 214
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 29/219 (13%)
Query: 48 ATKNFHPSNKLGEGGFGPVFKGKLD-DGREIAVKKLS-HSSNQGKKEFE-NEAKLLARVQ 104
+ +NF K+GEG +G V+K + G +A+KK+ + +G E LL +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 105 HRNVVNLLGYCAHGAEKL-LIYEYVINE--------SLDKVLFSLIKD--IQIL------ 147
H N+V LL H KL L++E++ + +L + LIK Q+L
Sbjct: 62 HPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 148 --FRKKKTDIKASNILLDDKWIPKIADFGMARLF-PEDQTHVNTRVAGTNGYMAPEYVMH 204
R D+K N+L++ + K+ADFG+AR F +T+ + V T Y APE ++
Sbjct: 121 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLG 178
Query: 205 G-HLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLL 242
+ S D++S G + E+++ R + F D + L
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 215
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 90/195 (46%), Gaps = 25/195 (12%)
Query: 58 LGEGGFGPVFKGKLDDGR-EIAVKKLSHSSNQGK-KEFENEAKLLARVQHRNVVNLLGYC 115
+GEG +G V + + +A+KK+S +Q + E K+L R +H N++ +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 98
Query: 116 AHGAEKLLIYEYVINESLDKVLFSLIKD------------IQILFRKKKT--------DI 155
+ + Y++ + ++ L+ L+K QIL K D+
Sbjct: 99 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 158
Query: 156 KASNILLDDKWIPKIADFGMARLFPEDQTHVN--TRVAGTNGYMAPEYVMHGHLSVKA-D 212
K SN+LL+ KI DFG+AR+ D H T T Y APE +++ K+ D
Sbjct: 159 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 218
Query: 213 VFSFGVVILELISGQ 227
++S G ++ E++S +
Sbjct: 219 IWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 90/195 (46%), Gaps = 25/195 (12%)
Query: 58 LGEGGFGPVFKGKLDDGR-EIAVKKLSHSSNQGK-KEFENEAKLLARVQHRNVVNLLGYC 115
+GEG +G V + + +A+KK+S +Q + E K+L R +H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 116 AHGAEKLLIYEYVINESLDKVLFSLIKD------------IQILFRKKKT--------DI 155
+ + Y++ + ++ L+ L+K QIL K D+
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 150
Query: 156 KASNILLDDKWIPKIADFGMARLFPEDQTHVN--TRVAGTNGYMAPEYVMHGHLSVKA-D 212
K SN+LL+ KI DFG+AR+ D H T T Y APE +++ K+ D
Sbjct: 151 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 210
Query: 213 VFSFGVVILELISGQ 227
++S G ++ E++S +
Sbjct: 211 IWSVGCILAEMLSNR 225
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 27/196 (13%)
Query: 58 LGEGGFGPVFKG--KLDDGREIAVKKLSHSSNQGKKEFE-NEAKLLARVQHRNVVNLLGY 114
+GEG +G V L+ R +A+KK+S +Q + E K+L R +H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVR-VAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDI 93
Query: 115 CAHGAEKLLIYEYVINESLDKVLFSLIKD------------IQILFRKKKT--------D 154
+ + Y++ + ++ L+ L+K QIL K D
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRD 153
Query: 155 IKASNILLDDKWIPKIADFGMARLFPEDQTHVN--TRVAGTNGYMAPEYVMHGHLSVKA- 211
+K SN+LL+ KI DFG+AR+ D H T T Y APE +++ K+
Sbjct: 154 LKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 213
Query: 212 DVFSFGVVILELISGQ 227
D++S G ++ E++S +
Sbjct: 214 DIWSVGCILAEMLSNR 229
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 105/270 (38%), Gaps = 41/270 (15%)
Query: 48 ATKNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFEN----EAKLLARV 103
A ++F LG+G FG V+ + + I K+ + K E+ E ++ + +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 104 QHRNVVNLLGYCAHGAEKLLIYEY----VINESLDKV-----------LFSLIKDIQILF 148
+H N++ L GY LI EY + L K+ + L +
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 127
Query: 149 RKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
K+ DIK N+LL KIADFG + P + + GT Y+ PE +
Sbjct: 128 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLCGTLDYLPPEMIEGRM 184
Query: 207 LSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASD 266
K D++S GV+ E + G+ N + YK+ +E P
Sbjct: 185 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----------YKRISRVEFTFPDFVTEG 234
Query: 267 SGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
+ D I+ + + +P RP +R V+
Sbjct: 235 ARDLISRLL-------KHNPSQRPMLREVL 257
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 90/195 (46%), Gaps = 25/195 (12%)
Query: 58 LGEGGFGPVFKGKLDDGR-EIAVKKLSHSSNQGK-KEFENEAKLLARVQHRNVVNLLGYC 115
+GEG +G V + + +A+KK+S +Q + E K+L R +H N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 116 AHGAEKLLIYEYVINESLDKVLFSLIKD------------IQILFRKKKT--------DI 155
+ + Y++ + ++ L+ L+K QIL K D+
Sbjct: 111 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 170
Query: 156 KASNILLDDKWIPKIADFGMARLFPEDQTHVN--TRVAGTNGYMAPEYVMHGHLSVKA-D 212
K SN+LL+ KI DFG+AR+ D H T T Y APE +++ K+ D
Sbjct: 171 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 230
Query: 213 VFSFGVVILELISGQ 227
++S G ++ E++S +
Sbjct: 231 IWSVGCILAEMLSNR 245
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 102/219 (46%), Gaps = 29/219 (13%)
Query: 48 ATKNFHPSNKLGEGGFGPVFKGKLD-DGREIAVKKLS-HSSNQGKKEFE-NEAKLLARVQ 104
+ +NF K+GEG +G V+K + G +A+KK+ + +G E LL +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 105 HRNVVNLLGYCAHGAEKL-LIYEYVINESLD----------------KVLFSLIKDIQIL 147
H N+V LL H KL L++E++ + D LF L++ +
Sbjct: 61 HPNIVKLLD-VIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 148 F--RKKKTDIKASNILLDDKWIPKIADFGMARLF-PEDQTHVNTRVAGTNGYMAPEYVMH 204
R D+K N+L++ + K+ADFG+AR F +T+ + V T Y APE ++
Sbjct: 120 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLG 177
Query: 205 G-HLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLL 242
+ S D++S G + E+++ R + F D + L
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 214
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 27/196 (13%)
Query: 58 LGEGGFGPVFKG--KLDDGREIAVKKLSHSSNQGK-KEFENEAKLLARVQHRNVVNL--- 111
+GEG +G V L+ R +A+KK+S +Q + E K+L R +H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 93
Query: 112 ---------------LGYCAHGAEKLLIYEYVINESLDKVLFSLIKDIQILFRKK--KTD 154
KLL +++ N+ + L+ +++ ++ + D
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIHSANVLHRD 153
Query: 155 IKASNILLDDKWIPKIADFGMARLFPEDQTHVN--TRVAGTNGYMAPEYVMHGHLSVKA- 211
+K SN+LL+ KI DFG+AR+ D H T T Y APE +++ K+
Sbjct: 154 LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 213
Query: 212 DVFSFGVVILELISGQ 227
D++S G ++ E++S +
Sbjct: 214 DIWSVGCILAEMLSNR 229
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 92/203 (45%), Gaps = 30/203 (14%)
Query: 52 FHPSNKLGEGGFGPVFKGK-----LDDGREIAVKKLSHSSNQG--KKEFENEAKLLARVQ 104
+ +LG G F V K + L + K+ + SS +G +++ E E +L +Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 105 HRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLF---SLIKDIQILFRKK---------- 151
H NV+ L + + +LI E V L L SL ++ F K+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 152 ----KTDIKASNILLDDKWIPK----IADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVM 203
D+K NI+L D+ +PK I DFG+A N + GT ++APE V
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEFVAPEIVN 190
Query: 204 HGHLSVKADVFSFGVVILELISG 226
+ L ++AD++S GV+ L+SG
Sbjct: 191 YEPLGLEADMWSIGVITYILLSG 213
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 31/220 (14%)
Query: 48 ATKNFHPSNKLGEGGFGPVFKGKLD-DGREIAVKKLS-HSSNQGKKEFE-NEAKLLARVQ 104
+ +NF K+GEG +G V+K + G +A+KK+ + +G E LL +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 105 HRNVVNLLGYCAHGAEKL-LIYEYVINESLDKV-----------------LFSLIKDIQI 146
H N+V LL H KL L++E+ +++ L K LF L++ +
Sbjct: 61 HPNIVKLLD-VIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 147 LF--RKKKTDIKASNILLDDKWIPKIADFGMARLF-PEDQTHVNTRVAGTNGYMAPEYVM 203
R D+K N+L++ + K+ADFG+AR F +T+ + V T Y APE ++
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 176
Query: 204 HG-HLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLL 242
+ S D++S G + E+++ R + F D + L
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 214
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 29/199 (14%)
Query: 51 NFHPSNKLGEGGFGPV-FKGKLDDGREIAVK-----KLSHSSNQGKKEFENEAKLLARVQ 104
N+ LGEG FG V G+++A+K L+ S QG+ E E L ++
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGR--IEREISYLRLLR 66
Query: 105 HRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLF--------------SLIKDIQILFRK 150
H +++ L E +++ EY NE D ++ +I ++ R
Sbjct: 67 HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH 126
Query: 151 KKT--DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLS 208
K D+K N+LLD+ KIADFG++ + D + T G+ Y APE V+ G L
Sbjct: 127 KIVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTS-CGSPNYAAPE-VISGKLY 183
Query: 209 V--KADVFSFGVVILELIS 225
+ DV+S GV++ ++
Sbjct: 184 AGPEVDVWSCGVILYVMLC 202
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 29/199 (14%)
Query: 51 NFHPSNKLGEGGFGPV-FKGKLDDGREIAVK-----KLSHSSNQGKKEFENEAKLLARVQ 104
N+ LGEG FG V G+++A+K L+ S QG+ E E L ++
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGR--IEREISYLRLLR 62
Query: 105 HRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLF--------------SLIKDIQILFRK 150
H +++ L E +++ EY NE D ++ +I ++ R
Sbjct: 63 HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH 122
Query: 151 KKT--DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLS 208
K D+K N+LLD+ KIADFG++ + D + T G+ Y APE V+ G L
Sbjct: 123 KIVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTS-CGSPNYAAPE-VISGKLY 179
Query: 209 V--KADVFSFGVVILELIS 225
+ DV+S GV++ ++
Sbjct: 180 AGPEVDVWSCGVILYVMLC 198
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 92/220 (41%), Gaps = 47/220 (21%)
Query: 51 NFHPSNKLGEGGFGPVF--KGKLDDGREIAVKKLSHSSNQ-GKKEFENEAKLLARVQHRN 107
+F P LG GGFG VF K K+DD A+K++ + + +++ E K LA+++H
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDC-NYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64
Query: 108 VVNLLGYC--AHGAEKLL-----IYEYVINESLDK-----------------------VL 137
+V + EKL +Y Y+ + K +
Sbjct: 65 IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIF 124
Query: 138 FSLIKDIQILFRK--KKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHV--------- 186
+ + ++ L K D+K SNI + K+ DFG+ +D+
Sbjct: 125 LQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAY 184
Query: 187 --NTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVVILELI 224
+T GT YM+PE + S K D+FS G+++ EL+
Sbjct: 185 ARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 29/219 (13%)
Query: 48 ATKNFHPSNKLGEGGFGPVFKGKLD-DGREIAVKKLS-HSSNQGKKEFE-NEAKLLARVQ 104
+ +NF K+GEG +G V+K + G +A+KK+ + +G E LL +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 105 HRNVVNLLGYCAHGAEKL-LIYEYVINE--------SLDKVLFSLIKD--IQIL------ 147
H N+V LL H KL L++E++ + +L + LIK Q+L
Sbjct: 62 HPNIVKLLD-VIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 148 --FRKKKTDIKASNILLDDKWIPKIADFGMARLF-PEDQTHVNTRVAGTNGYMAPEYVMH 204
R D+K N+L++ + K+ADFG+AR F +T+ + V T Y APE ++
Sbjct: 121 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLG 178
Query: 205 G-HLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLL 242
+ S D++S G + E+++ R + F D + L
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 215
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 99/223 (44%), Gaps = 33/223 (14%)
Query: 48 ATKNFHPSNKLGEGGFGPVFKGK-LDDGREIAVKKLSHSSNQGKKEFEN--EAKLLARVQ 104
AT + P ++G G +G V+K + G +A+K + + + E LL R++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 105 ---HRNVVNLLGYCAHG-----AEKLLIYEYV---INESLDK-----VLFSLIKDIQILF 148
H NVV L+ CA + L++E+V + LDK + IKD+ F
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 149 RKK----------KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMA 198
+ D+K NIL+ K+ADFG+AR++ Q ++ V T Y A
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY-SYQMALDPVVV-TLWYRA 179
Query: 199 PEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNL 241
PE ++ + D++S G + E+ +R F + +A L
Sbjct: 180 PEVLLQSTYATPVDMWSVGCIFAEMF--RRKPLFCGNSEADQL 220
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 31/220 (14%)
Query: 48 ATKNFHPSNKLGEGGFGPVFKGKLD-DGREIAVKKLS-HSSNQGKKEFE-NEAKLLARVQ 104
+ +NF K+GEG +G V+K + G +A+KK+ + +G E LL +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 105 HRNVVNLLGYCAHGAEKL-LIYEYVINESLDKV-----------------LFSLIKDIQI 146
H N+V LL H KL L++E+ +++ L K LF L++ +
Sbjct: 61 HPNIVKLLD-VIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 147 LF--RKKKTDIKASNILLDDKWIPKIADFGMARLF-PEDQTHVNTRVAGTNGYMAPEYVM 203
R D+K N+L++ + K+ADFG+AR F +T+ + V T Y APE ++
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 176
Query: 204 HG-HLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLL 242
+ S D++S G + E+++ R + F D + L
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 214
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 103/218 (47%), Gaps = 31/218 (14%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLD-DGREIAVKKLS-HSSNQGKKEFE-NEAKLLARVQHR 106
+NF K+GEG +G V+K + G +A+KK+ + +G E LL + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 107 NVVNLLGYCAHGAEKL-LIYEYVINESLDKV-----------------LFSLIKDIQILF 148
N+V LL H KL L++E+ +++ L K LF L++ +
Sbjct: 62 NIVKLLD-VIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 149 --RKKKTDIKASNILLDDKWIPKIADFGMARLF-PEDQTHVNTRVAGTNGYMAPEYVMHG 205
R D+K N+L++ + K+ADFG+AR F +T+ + V T Y APE ++
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGC 177
Query: 206 -HLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLL 242
+ S D++S G + E+++ R + F D + L
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 213
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 29/199 (14%)
Query: 51 NFHPSNKLGEGGFGPV-FKGKLDDGREIAVK-----KLSHSSNQGKKEFENEAKLLARVQ 104
N+ LGEG FG V G+++A+K L+ S QG+ E E L ++
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGR--IEREISYLRLLR 71
Query: 105 HRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLF--------------SLIKDIQILFRK 150
H +++ L E +++ EY NE D ++ +I ++ R
Sbjct: 72 HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH 131
Query: 151 KKT--DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLS 208
K D+K N+LLD+ KIADFG++ + D + T G+ Y APE V+ G L
Sbjct: 132 KIVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTS-CGSPNYAAPE-VISGKLY 188
Query: 209 V--KADVFSFGVVILELIS 225
+ DV+S GV++ ++
Sbjct: 189 AGPEVDVWSCGVILYVMLC 207
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 29/199 (14%)
Query: 51 NFHPSNKLGEGGFGPV-FKGKLDDGREIAVK-----KLSHSSNQGKKEFENEAKLLARVQ 104
N+ LGEG FG V G+++A+K L+ S QG+ E E L ++
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGR--IEREISYLRLLR 72
Query: 105 HRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLF--------------SLIKDIQILFRK 150
H +++ L E +++ EY NE D ++ +I ++ R
Sbjct: 73 HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH 132
Query: 151 KKT--DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLS 208
K D+K N+LLD+ KIADFG++ + D + T G+ Y APE V+ G L
Sbjct: 133 KIVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTS-CGSPNYAAPE-VISGKLY 189
Query: 209 V--KADVFSFGVVILELIS 225
+ DV+S GV++ ++
Sbjct: 190 AGPEVDVWSCGVILYVMLC 208
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 105/270 (38%), Gaps = 41/270 (15%)
Query: 48 ATKNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFEN----EAKLLARV 103
A ++F LG+G FG V+ + + I K+ + K E+ E ++ + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 104 QHRNVVNLLGYCAHGAEKLLIYEY----VINESLDKV-----------LFSLIKDIQILF 148
+H N++ L GY LI EY + L K+ + L +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 149 RKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
K+ DIK N+LL KIADFG + P + + GT Y+ PE +
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RAALCGTLDYLPPEMIEGRM 185
Query: 207 LSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASD 266
K D++S GV+ E + G+ N + YK+ +E P
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----------YKRISRVEFTFPDFVTEG 235
Query: 267 SGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
+ D I+ + + +P RP +R V+
Sbjct: 236 ARDLISRLL-------KHNPSQRPMLREVL 258
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 96/223 (43%), Gaps = 33/223 (14%)
Query: 48 ATKNFHPSNKLGEGGFGPVFKGK-LDDGREIAVKKLSHSSNQGKKEFEN--EAKLLARVQ 104
AT + P ++G G +G V+K + G +A+K + + + E LL R++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 105 ---HRNVVNLLGYCAHG-----AEKLLIYEYV---INESLDK-----VLFSLIKDIQILF 148
H NVV L+ CA + L++E+V + LDK + IKD+ F
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 149 RKK----------KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMA 198
+ D+K NIL+ K+ADFG+AR++ V T Y A
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV--TLWYRA 179
Query: 199 PEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNL 241
PE ++ + D++S G + E+ +R F + +A L
Sbjct: 180 PEVLLQSTYATPVDMWSVGCIFAEMF--RRKPLFCGNSEADQL 220
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 93/203 (45%), Gaps = 30/203 (14%)
Query: 52 FHPSNKLGEGGFGPVFKGK-----LDDGREIAVKKLSHSSNQG--KKEFENEAKLLARVQ 104
+ +LG G F V K + L + K+ + SS +G +++ E E +L +Q
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 105 HRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLF---SLIKDIQILFRKK---------- 151
H NV+ L + + +LI E V L L SL ++ F K+
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 131
Query: 152 ----KTDIKASNILLDDKWIPK----IADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVM 203
D+K NI+L D+ +PK I DFG+A D + + GT ++APE V
Sbjct: 132 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIVN 189
Query: 204 HGHLSVKADVFSFGVVILELISG 226
+ L ++AD++S GV+ L+SG
Sbjct: 190 YEPLGLEADMWSIGVITYILLSG 212
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 105/270 (38%), Gaps = 41/270 (15%)
Query: 48 ATKNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFEN----EAKLLARV 103
A ++F LG+G FG V+ + + I K+ + K E+ E ++ + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 104 QHRNVVNLLGYCAHGAEKLLIYEY----VINESLDKV-----------LFSLIKDIQILF 148
+H N++ L GY LI EY + L K+ + L +
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 149 RKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
K+ DIK N+LL KIADFG + P + + GT Y+ PE +
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDT---LCGTLDYLPPEMIEGRM 183
Query: 207 LSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASD 266
K D++S GV+ E + G+ N + YK+ +E P
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----------YKRISRVEFTFPDFVTEG 233
Query: 267 SGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
+ D I+ + + +P RP +R V+
Sbjct: 234 ARDLISRLL-------KHNPSQRPMLREVL 256
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 93/203 (45%), Gaps = 30/203 (14%)
Query: 52 FHPSNKLGEGGFGPVFKGK-----LDDGREIAVKKLSHSSNQG--KKEFENEAKLLARVQ 104
+ +LG G F V K + L + K+ + SS +G +++ E E +L +Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 105 HRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLF---SLIKDIQILFRKK---------- 151
H NV+ L + + +LI E V L L SL ++ F K+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 152 ----KTDIKASNILLDDKWIPK----IADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVM 203
D+K NI+L D+ +PK I DFG+A D + + GT ++APE V
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIVN 190
Query: 204 HGHLSVKADVFSFGVVILELISG 226
+ L ++AD++S GV+ L+SG
Sbjct: 191 YEPLGLEADMWSIGVITYILLSG 213
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 93/203 (45%), Gaps = 30/203 (14%)
Query: 52 FHPSNKLGEGGFGPVFKGK-----LDDGREIAVKKLSHSSNQG--KKEFENEAKLLARVQ 104
+ +LG G F V K + L + K+ + SS +G +++ E E +L +Q
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 105 HRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLF---SLIKDIQILFRKK---------- 151
H NV+ L + + +LI E V L L SL ++ F K+
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 131
Query: 152 ----KTDIKASNILLDDKWIPK----IADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVM 203
D+K NI+L D+ +PK I DFG+A D + + GT ++APE V
Sbjct: 132 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIVN 189
Query: 204 HGHLSVKADVFSFGVVILELISG 226
+ L ++AD++S GV+ L+SG
Sbjct: 190 YEPLGLEADMWSIGVITYILLSG 212
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 90/195 (46%), Gaps = 25/195 (12%)
Query: 58 LGEGGFGPVFKGKLDDGR-EIAVKKLSHSSNQGK-KEFENEAKLLARVQHRNVVNLLGYC 115
+GEG +G V + + +A+KK+S +Q + E K+L R +H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 116 AHGAEKLLIYEYVINESLDKVLFSLIKD------------IQILFRKKKT--------DI 155
+ + Y++ + ++ L+ L+K QIL K D+
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 150
Query: 156 KASNILLDDKWIPKIADFGMARLFPEDQTHVN--TRVAGTNGYMAPEYVMHGHLSVKA-D 212
K SN+LL+ KI DFG+AR+ D H T T Y APE +++ K+ D
Sbjct: 151 KPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 210
Query: 213 VFSFGVVILELISGQ 227
++S G ++ E++S +
Sbjct: 211 IWSVGCILAEMLSNR 225
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 93/203 (45%), Gaps = 30/203 (14%)
Query: 52 FHPSNKLGEGGFGPVFKGK-----LDDGREIAVKKLSHSSNQG--KKEFENEAKLLARVQ 104
+ +LG G F V K + L + K+ + SS +G +++ E E +L +Q
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 105 HRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLF---SLIKDIQILFRKK---------- 151
H NV+ L + + +LI E V L L SL ++ F K+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 152 ----KTDIKASNILLDDKWIPK----IADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVM 203
D+K NI+L D+ +PK I DFG+A D + + GT ++APE V
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIVN 190
Query: 204 HGHLSVKADVFSFGVVILELISG 226
+ L ++AD++S GV+ L+SG
Sbjct: 191 YEPLGLEADMWSIGVITYILLSG 213
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 90/199 (45%), Gaps = 40/199 (20%)
Query: 58 LGEGGFGPVFKGKLDDGRE---IAVKKLSHSSNQGKK-EFENEAKLLARVQHRNVVNLLG 113
LG G F V +D R +A+K ++ + +GK+ ENE +L +++H N+V L
Sbjct: 26 LGTGAFSEVILA--EDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 114 YCAHGAEKLLIYEYV-----------------------INESLDKVLFSLIKDIQILFRK 150
G LI + V I + LD V + + D+ I+ R
Sbjct: 84 IYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKY--LHDLGIVHR- 140
Query: 151 KKTDIKASNIL---LDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHL 207
D+K N+L LD+ I+DFG++++ ED V + GT GY+APE +
Sbjct: 141 ---DLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKPY 195
Query: 208 SVKADVFSFGVVILELISG 226
S D +S GV+ L+ G
Sbjct: 196 SKAVDCWSIGVIAYILLCG 214
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 103/218 (47%), Gaps = 31/218 (14%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLD-DGREIAVKKLS-HSSNQGKKEFE-NEAKLLARVQHR 106
+NF K+GEG +G V+K + G +A+KK+ + +G E LL + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 107 NVVNLLGYCAHGAEKL-LIYEYVINESLDKV-----------------LFSLIKDIQILF 148
N+V LL H KL L++E+ +++ L K LF L++ +
Sbjct: 62 NIVKLLD-VIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 149 --RKKKTDIKASNILLDDKWIPKIADFGMARLF-PEDQTHVNTRVAGTNGYMAPEYVMHG 205
R D+K N+L++ + K+ADFG+AR F +T+ + V T Y APE ++
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGC 177
Query: 206 -HLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLL 242
+ S D++S G + E+++ R + F D + L
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 213
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 92/203 (45%), Gaps = 30/203 (14%)
Query: 52 FHPSNKLGEGGFGPVFKGK-----LDDGREIAVKKLSHSSNQG--KKEFENEAKLLARVQ 104
+ +LG G F V K + L + K+ + SS +G +++ E E +L +Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 105 HRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLF---SLIKDIQILFRKK---------- 151
H NV+ L + + +LI E V L L SL ++ F K+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 152 ----KTDIKASNILLDDKWIPK----IADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVM 203
D+K NI+L D+ +PK I DFG+A N + GT ++APE V
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEFVAPEIVN 190
Query: 204 HGHLSVKADVFSFGVVILELISG 226
+ L ++AD++S GV+ L+SG
Sbjct: 191 YEPLGLEADMWSIGVITYILLSG 213
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 90/195 (46%), Gaps = 25/195 (12%)
Query: 58 LGEGGFGPVFKGKLDDGR-EIAVKKLSHSSNQGK-KEFENEAKLLARVQHRNVVNLLGYC 115
+GEG +G V + + +A+KK+S +Q + E K+L R +H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 116 AHGAEKLLIYEYVINESLDKVLFSLIKD------------IQILFRKKKT--------DI 155
+ + Y++ + ++ L+ L+K QIL K D+
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 150
Query: 156 KASNILLDDKWIPKIADFGMARLFPEDQTHVN--TRVAGTNGYMAPEYVMHGHLSVKA-D 212
K SN+LL+ KI DFG+AR+ D H T T Y APE +++ K+ D
Sbjct: 151 KPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 210
Query: 213 VFSFGVVILELISGQ 227
++S G ++ E++S +
Sbjct: 211 IWSVGCILAEMLSNR 225
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 90/199 (45%), Gaps = 40/199 (20%)
Query: 58 LGEGGFGPVFKGKLDDGRE---IAVKKLSHSSNQGKK-EFENEAKLLARVQHRNVVNLLG 113
LG G F V +D R +A+K ++ + +GK+ ENE +L +++H N+V L
Sbjct: 26 LGTGAFSEVILA--EDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 114 YCAHGAEKLLIYEYV-----------------------INESLDKVLFSLIKDIQILFRK 150
G LI + V I + LD V + + D+ I+ R
Sbjct: 84 IYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKY--LHDLGIVHR- 140
Query: 151 KKTDIKASNIL---LDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHL 207
D+K N+L LD+ I+DFG++++ ED V + GT GY+APE +
Sbjct: 141 ---DLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKPY 195
Query: 208 SVKADVFSFGVVILELISG 226
S D +S GV+ L+ G
Sbjct: 196 SKAVDCWSIGVIAYILLCG 214
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 27/196 (13%)
Query: 58 LGEGGFGPVFKG--KLDDGREIAVKKLSHSSNQGK-KEFENEAKLLARVQHRNVVNLLGY 114
+GEG +G V L+ R +A+KK+S +Q + E K+L R +H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 93
Query: 115 CAHGAEKLLIYEYVINESLDKVLFSLIKD------------IQILFRKKKT--------D 154
+ + Y++ + ++ L+ L+K QIL K D
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRD 153
Query: 155 IKASNILLDDKWIPKIADFGMARLFPEDQTHVN--TRVAGTNGYMAPEYVMHGHLSVKA- 211
+K SN+LL+ KI DFG+AR+ D H T T Y APE +++ K+
Sbjct: 154 LKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 213
Query: 212 DVFSFGVVILELISGQ 227
D++S G ++ E++S +
Sbjct: 214 DIWSVGCILAEMLSNR 229
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 103/217 (47%), Gaps = 29/217 (13%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLD-DGREIAVKKLS-HSSNQGKKEFE-NEAKLLARVQHR 106
+NF K+GEG +G V+K + G +A+KK+ + +G E LL + H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 107 NVVNLLGYCAHGAEKL-LIYEYVINE--------SLDKVLFSLIKD--IQIL-------- 147
N+V LL H KL L++E++ + +L + LIK Q+L
Sbjct: 64 NIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 148 FRKKKTDIKASNILLDDKWIPKIADFGMARLF-PEDQTHVNTRVAGTNGYMAPEYVMHG- 205
R D+K N+L++ + K+ADFG+AR F +T+ + V T Y APE ++
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCK 180
Query: 206 HLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLL 242
+ S D++S G + E+++ R + F D + L
Sbjct: 181 YYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 215
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 106/270 (39%), Gaps = 41/270 (15%)
Query: 48 ATKNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFEN----EAKLLARV 103
A ++F LG+G FG V+ + + I K+ + K E+ E ++ + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 104 QHRNVVNLLGYCAHGAEKLLIYEYV----INESLDKV-----------LFSLIKDIQILF 148
+H N++ L GY LI EY + + L K+ + L +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH 130
Query: 149 RKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
K+ DIK N+LL KIADFG + P + + GT Y+ PE +
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLXGTLDYLPPEMIEGRM 187
Query: 207 LSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASD 266
K D++S GV+ E + G+ N + YK+ +E P
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----------YKRISRVEFTFPDFVTEG 237
Query: 267 SGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
+ D I+ + + +P RP +R V+
Sbjct: 238 ARDLISRLL-------KHNPSQRPMLREVL 260
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 92/203 (45%), Gaps = 30/203 (14%)
Query: 52 FHPSNKLGEGGFGPVFKGK-----LDDGREIAVKKLSHSSNQG--KKEFENEAKLLARVQ 104
+ +LG G F V K + L + K+ + SS +G +++ E E +L +Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 105 HRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLF---SLIKDIQILFRKK---------- 151
H NV+ L + + +LI E V L L SL ++ F K+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 152 ----KTDIKASNILLDDKWIPK----IADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVM 203
D+K NI+L D+ +PK I DFG+A N + GT ++APE V
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEFVAPEIVN 190
Query: 204 HGHLSVKADVFSFGVVILELISG 226
+ L ++AD++S GV+ L+SG
Sbjct: 191 YEPLGLEADMWSIGVITYILLSG 213
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 97/194 (50%), Gaps = 29/194 (14%)
Query: 58 LGEGGFGPVF--KGKLDDGREIAVKKLSHSSNQGKKEFEN---EAKLLARVQHRNVVNLL 112
LG+G FG V K K+ G+E AVK +S + K + E+ E +LL ++ H N++ L
Sbjct: 34 LGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 92
Query: 113 GYCAHGAEKLLIYE-YVINESLDKVL----FSLIKDIQIL---------FRKKKT---DI 155
+ L+ E Y E D+++ FS + +I+ K K D+
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDL 152
Query: 156 KASNILLDDKWIP---KIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKAD 212
K N+LL+ K +I DFG++ F E + ++ GT Y+APE V+HG K D
Sbjct: 153 KPENLLLESKSKDANIRIIDFGLSTHF-EASKKMKDKI-GTAYYIAPE-VLHGTYDEKCD 209
Query: 213 VFSFGVVILELISG 226
V+S GV++ L+SG
Sbjct: 210 VWSTGVILYILLSG 223
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 90/199 (45%), Gaps = 40/199 (20%)
Query: 58 LGEGGFGPVFKGKLDDGRE---IAVKKLSHSSNQGKK-EFENEAKLLARVQHRNVVNLLG 113
LG G F V +D R +A+K ++ + +GK+ ENE +L +++H N+V L
Sbjct: 26 LGTGAFSEVILA--EDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 114 YCAHGAEKLLIYEYV-----------------------INESLDKVLFSLIKDIQILFRK 150
G LI + V I + LD V + + D+ I+ R
Sbjct: 84 IYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKY--LHDLGIVHR- 140
Query: 151 KKTDIKASNIL---LDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHL 207
D+K N+L LD+ I+DFG++++ ED V + GT GY+APE +
Sbjct: 141 ---DLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKPY 195
Query: 208 SVKADVFSFGVVILELISG 226
S D +S GV+ L+ G
Sbjct: 196 SKAVDCWSIGVIAYILLCG 214
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 97/194 (50%), Gaps = 29/194 (14%)
Query: 58 LGEGGFGPVF--KGKLDDGREIAVKKLSHSSNQGKKEFEN---EAKLLARVQHRNVVNLL 112
LG+G FG V K K+ G+E AVK +S + K + E+ E +LL ++ H N++ L
Sbjct: 58 LGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 116
Query: 113 GYCAHGAEKLLIYE-YVINESLDKVL----FSLIKDIQIL---------FRKKKT---DI 155
+ L+ E Y E D+++ FS + +I+ K K D+
Sbjct: 117 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDL 176
Query: 156 KASNILLDDKWIP---KIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKAD 212
K N+LL+ K +I DFG++ F E + ++ GT Y+APE V+HG K D
Sbjct: 177 KPENLLLESKSKDANIRIIDFGLSTHF-EASKKMKDKI-GTAYYIAPE-VLHGTYDEKCD 233
Query: 213 VFSFGVVILELISG 226
V+S GV++ L+SG
Sbjct: 234 VWSTGVILYILLSG 247
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 90/199 (45%), Gaps = 40/199 (20%)
Query: 58 LGEGGFGPVFKGKLDDGRE---IAVKKLSHSSNQGKK-EFENEAKLLARVQHRNVVNLLG 113
LG G F V +D R +A+K ++ + +GK+ ENE +L +++H N+V L
Sbjct: 26 LGTGAFSEVILA--EDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 114 YCAHGAEKLLIYEYV-----------------------INESLDKVLFSLIKDIQILFRK 150
G LI + V I + LD V + + D+ I+ R
Sbjct: 84 IYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKY--LHDLGIVHR- 140
Query: 151 KKTDIKASNIL---LDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHL 207
D+K N+L LD+ I+DFG++++ ED V + GT GY+APE +
Sbjct: 141 ---DLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKPY 195
Query: 208 SVKADVFSFGVVILELISG 226
S D +S GV+ L+ G
Sbjct: 196 SKAVDCWSIGVIAYILLCG 214
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 92/203 (45%), Gaps = 30/203 (14%)
Query: 52 FHPSNKLGEGGFGPVFKGK-----LDDGREIAVKKLSHSSNQG--KKEFENEAKLLARVQ 104
+ +LG G F V K + L + K+ + SS +G +++ E E +L +Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 105 HRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLF---SLIKDIQILFRKK---------- 151
H NV+ L + + +LI E V L L SL ++ F K+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 152 ----KTDIKASNILLDDKWIPK----IADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVM 203
D+K NI+L D+ +PK I DFG+A N + GT ++APE V
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEFVAPEIVN 190
Query: 204 HGHLSVKADVFSFGVVILELISG 226
+ L ++AD++S GV+ L+SG
Sbjct: 191 YEPLGLEADMWSIGVITYILLSG 213
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 98/213 (46%), Gaps = 38/213 (17%)
Query: 46 VSATKNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLSHSSNQGKKEFE-NEAKLLARV 103
+S++ F KLG G + V+KG G +A+K++ S +G E L+ +
Sbjct: 1 MSSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL 60
Query: 104 QHRNVVNLLGYCAHGAEKL-LIYEYVINESLDKVL-------------FSLIKDIQ---- 145
+H N+V L H KL L++E++ N+ L K + +L+K Q
Sbjct: 61 KHENIVRLYD-VIHTENKLTLVFEFMDND-LKKYMDSRTVGNTPRGLELNLVKYFQWQLL 118
Query: 146 ----------ILFRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNG 195
IL R D+K N+L++ + K+ DFG+AR F ++ V T
Sbjct: 119 QGLAFCHENKILHR----DLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TLW 173
Query: 196 YMAPEYVMHGH-LSVKADVFSFGVVILELISGQ 227
Y AP+ +M S D++S G ++ E+I+G+
Sbjct: 174 YRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 97/194 (50%), Gaps = 29/194 (14%)
Query: 58 LGEGGFGPVF--KGKLDDGREIAVKKLSHSSNQGKKEFEN---EAKLLARVQHRNVVNLL 112
LG+G FG V K K+ G+E AVK +S + K + E+ E +LL ++ H N++ L
Sbjct: 57 LGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 115
Query: 113 GYCAHGAEKLLIYE-YVINESLDKVL----FSLIKDIQIL---------FRKKKT---DI 155
+ L+ E Y E D+++ FS + +I+ K K D+
Sbjct: 116 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDL 175
Query: 156 KASNILLDDKWIP---KIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKAD 212
K N+LL+ K +I DFG++ F E + ++ GT Y+APE V+HG K D
Sbjct: 176 KPENLLLESKSKDANIRIIDFGLSTHF-EASKKMKDKI-GTAYYIAPE-VLHGTYDEKCD 232
Query: 213 VFSFGVVILELISG 226
V+S GV++ L+SG
Sbjct: 233 VWSTGVILYILLSG 246
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 97/226 (42%), Gaps = 36/226 (15%)
Query: 48 ATKNFHPSNKLGEGGFGPVFKGK-LDDGREIAVKKLSHSSNQGKK-----EFENEAKLLA 101
AT + P ++G G +G V+K + G +A+K + + G E LL
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 102 RVQ---HRNVVNLLGYCAHG-----AEKLLIYEYV---INESLDK-----VLFSLIKDIQ 145
R++ H NVV L+ CA + L++E+V + LDK + IKD+
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLM 126
Query: 146 ILFRKK----------KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNG 195
F + D+K NIL+ K+ADFG+AR++ T V T
Sbjct: 127 RQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALTPVVVTLW 184
Query: 196 YMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNL 241
Y APE ++ + D++S G + E+ +R F + +A L
Sbjct: 185 YRAPEVLLQSTYATPVDMWSVGCIFAEMF--RRKPLFCGNSEADQL 228
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 28/204 (13%)
Query: 48 ATKNFHPSN---KLGE-GGFGPVFKGKLDDGREIAVKKLSHS-SNQGKKEFENEAKLLAR 102
T++ +P + +GE G FG V+K + + +A K+ + S + +++ E +LA
Sbjct: 4 VTRDLNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILAS 63
Query: 103 VQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFSL---IKDIQILFRKKKT------ 153
H N+V LL + ++ E+ ++D V+ L + + QI K+T
Sbjct: 64 CDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNY 123
Query: 154 ---------DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMH 204
D+KA NIL K+ADFG++ GT +MAPE VM
Sbjct: 124 LHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMC 183
Query: 205 GH-----LSVKADVFSFGVVILEL 223
KADV+S G+ ++E+
Sbjct: 184 ETSKDRPYDYKADVWSLGITLIEM 207
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 93/203 (45%), Gaps = 30/203 (14%)
Query: 52 FHPSNKLGEGGFGPVFKGK-----LDDGREIAVKKLSHSSNQG--KKEFENEAKLLARVQ 104
+ +LG G F V K + L + K+ + SS +G +++ E E +L +Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 105 HRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLF---SLIKDIQILFRKK---------- 151
H NV+ L + + +LI E V L L SL ++ F K+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 152 ----KTDIKASNILLDDKWIPK----IADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVM 203
D+K NI+L D+ +PK I DFG+A D + + GT ++APE V
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIVN 190
Query: 204 HGHLSVKADVFSFGVVILELISG 226
+ L ++AD++S GV+ L+SG
Sbjct: 191 YEPLGLEADMWSIGVITYILLSG 213
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 111/271 (40%), Gaps = 49/271 (18%)
Query: 58 LGEGGFGPVFKGKLDDGR----EIAVKKLSHSSNQGKKE-FENEAKLLARVQHRNVVNLL 112
LGEG FG V++G + + +AVK KE F +EA ++ + H ++V L+
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 113 GYCAHGAEKLLIYEYVINE-------------SLDKVLFSL--------IKDIQILFRKK 151
G +++ Y E L VL+SL ++ I + R
Sbjct: 92 GIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHR-- 149
Query: 152 KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN-GYMAPEYVMHGHLSVK 210
DI NIL+ K+ DFG++R + ED+ + V +M+PE + +
Sbjct: 150 --DIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWMSPESINFRRFTTA 206
Query: 211 ADVFSFGVVILELISGQRNSSFNLD-VDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGD 269
+DV+ F V + E++S + F L+ D +L+ +L K D + P L
Sbjct: 207 SDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPD----LCPPVLYT----- 257
Query: 270 QIAMCIQIGLLCTQGDPQLRPTMRRVVVMLS 300
+ C DP RP +V LS
Sbjct: 258 -------LMTRCWDYDPSDRPRFTELVCSLS 281
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 91/200 (45%), Gaps = 31/200 (15%)
Query: 52 FHPSNKLGEGGFGPVFKGKLDDGREIAVKKLS-HSSNQGKKEFE-NEAKLLARVQHRNVV 109
+H K+GEG +G V+K + + G A+KK+ ++G E +L ++H N+V
Sbjct: 4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 110 NLLGYCAHGAEKLLIYEYVINESLDKVL----------------------FSLIKDIQIL 147
L +L++E+ +++ L K+L + D ++L
Sbjct: 64 KLYDVIHTKKRLVLVFEH-LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVL 122
Query: 148 FRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHG-H 206
R D+K N+L++ + KIADFG+AR F V T Y AP+ +M
Sbjct: 123 HR----DLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKK 177
Query: 207 LSVKADVFSFGVVILELISG 226
S D++S G + E+++G
Sbjct: 178 YSTTIDIWSVGCIFAEMVNG 197
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 105/270 (38%), Gaps = 41/270 (15%)
Query: 48 ATKNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFEN----EAKLLARV 103
A ++F LG+G FG V+ + + I K+ + K E+ E ++ + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 104 QHRNVVNLLGYCAHGAEKLLIYEY----VINESLDKV-----------LFSLIKDIQILF 148
+H N++ L GY LI EY + L K+ + L +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 149 RKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
K+ DIK N+LL KIADFG + P + + GT Y+ PE +
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RDDLCGTLDYLPPEMIEGRM 185
Query: 207 LSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASD 266
K D++S GV+ E + G+ N + YK+ +E P
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----------YKRISRVEFTFPDFVTEG 235
Query: 267 SGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
+ D I+ + + +P RP +R V+
Sbjct: 236 ARDLISRLL-------KHNPSQRPMLREVL 258
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 91/200 (45%), Gaps = 31/200 (15%)
Query: 52 FHPSNKLGEGGFGPVFKGKLDDGREIAVKKLS-HSSNQGKKEFE-NEAKLLARVQHRNVV 109
+H K+GEG +G V+K + + G A+KK+ ++G E +L ++H N+V
Sbjct: 4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 110 NLLGYCAHGAEKLLIYEYVINESLDKVL----------------------FSLIKDIQIL 147
L +L++E+ +++ L K+L + D ++L
Sbjct: 64 KLYDVIHTKKRLVLVFEH-LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVL 122
Query: 148 FRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHG-H 206
R D+K N+L++ + KIADFG+AR F V T Y AP+ +M
Sbjct: 123 HR----DLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKK 177
Query: 207 LSVKADVFSFGVVILELISG 226
S D++S G + E+++G
Sbjct: 178 YSTTIDIWSVGCIFAEMVNG 197
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 92/203 (45%), Gaps = 30/203 (14%)
Query: 52 FHPSNKLGEGGFGPVFKGK-----LDDGREIAVKKLSHSSNQG--KKEFENEAKLLARVQ 104
+ +LG G F V K + L + K+ + SS +G +++ E E +L +Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 105 HRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLF---SLIKDIQILFRKK---------- 151
H NV+ L + + +LI E V L L SL ++ F K+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 152 ----KTDIKASNILLDDKWIPK----IADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVM 203
D+K NI+L D+ +PK I DFG+A N + GT ++APE V
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEFVAPEIVN 190
Query: 204 HGHLSVKADVFSFGVVILELISG 226
+ L ++AD++S GV+ L+SG
Sbjct: 191 YEPLGLEADMWSIGVITYILLSG 213
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 111/271 (40%), Gaps = 49/271 (18%)
Query: 58 LGEGGFGPVFKGKLDDGR----EIAVKKLSHSSNQGKKE-FENEAKLLARVQHRNVVNLL 112
LGEG FG V++G + + +AVK KE F +EA ++ + H ++V L+
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 113 GYCAHGAEKLLIYEYVINE-------------SLDKVLFSL--------IKDIQILFRKK 151
G +++ Y E L VL+SL ++ I + R
Sbjct: 76 GIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHR-- 133
Query: 152 KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN-GYMAPEYVMHGHLSVK 210
DI NIL+ K+ DFG++R + ED+ + V +M+PE + +
Sbjct: 134 --DIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWMSPESINFRRFTTA 190
Query: 211 ADVFSFGVVILELISGQRNSSFNLD-VDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGD 269
+DV+ F V + E++S + F L+ D +L+ +L K D + P L
Sbjct: 191 SDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPD----LCPPVLYT----- 241
Query: 270 QIAMCIQIGLLCTQGDPQLRPTMRRVVVMLS 300
+ C DP RP +V LS
Sbjct: 242 -------LMTRCWDYDPSDRPRFTELVCSLS 265
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 92/203 (45%), Gaps = 30/203 (14%)
Query: 52 FHPSNKLGEGGFGPVFKGK-----LDDGREIAVKKLSHSSNQG--KKEFENEAKLLARVQ 104
+ +LG G F V K + L + K+ + SS +G +++ E E +L +Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 105 HRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLF---SLIKDIQILFRKK---------- 151
H NV+ L + + +LI E V L L SL ++ F K+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 152 ----KTDIKASNILLDDKWIPK----IADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVM 203
D+K NI+L D+ +PK I DFG+A N + GT ++APE V
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEFVAPEIVN 190
Query: 204 HGHLSVKADVFSFGVVILELISG 226
+ L ++AD++S GV+ L+SG
Sbjct: 191 YEPLGLEADMWSIGVITYILLSG 213
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 27/196 (13%)
Query: 58 LGEGGFGPVFKG--KLDDGREIAVKKLSHSSNQGK-KEFENEAKLLARVQHRNVVNLLGY 114
+GEG +G V L+ R +A++K+S +Q + E K+L R +H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVR-VAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 93
Query: 115 CAHGAEKLLIYEYVINESLDKVLFSLIKD------------IQILFRKKKT--------D 154
+ + Y++ + ++ L+ L+K QIL K D
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRD 153
Query: 155 IKASNILLDDKWIPKIADFGMARLFPEDQTHVN--TRVAGTNGYMAPEYVMHGHLSVKA- 211
+K SN+LL+ KI DFG+AR+ D H T T Y APE +++ K+
Sbjct: 154 LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 213
Query: 212 DVFSFGVVILELISGQ 227
D++S G ++ E++S +
Sbjct: 214 DIWSVGCILAEMLSNR 229
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 32/210 (15%)
Query: 47 SATKNFHPSNKLGEGGFGPVFK-GKLDDGREIAVKKLSHSS--NQGKKEFENEAKLLARV 103
S +++ +G G +G K + DG+ + K+L + S K+ +E LL +
Sbjct: 3 SRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL 62
Query: 104 QHRNVVN---------------LLGYCAHGAEKLLIY------EYVINESLDKVLFSLIK 142
+H N+V ++ YC G +I +Y+ E + +V+ L
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122
Query: 143 DIQILFRKK-------KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNG 195
++ R+ D+K +N+ LD K K+ DFG+AR+ D + V GT
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFV-GTPY 181
Query: 196 YMAPEYVMHGHLSVKADVFSFGVVILELIS 225
YM+PE + + K+D++S G ++ EL +
Sbjct: 182 YMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 97/194 (50%), Gaps = 29/194 (14%)
Query: 58 LGEGGFGPVF--KGKLDDGREIAVKKLSHSSNQGKKEFEN---EAKLLARVQHRNVVNLL 112
LG+G FG V K K+ G+E AVK +S + K + E+ E +LL ++ H N++ L
Sbjct: 40 LGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 98
Query: 113 GYCAHGAEKLLIYE-YVINESLDKVL----FSLIKDIQIL---------FRKKKT---DI 155
+ L+ E Y E D+++ FS + +I+ K K D+
Sbjct: 99 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDL 158
Query: 156 KASNILLDDKWIP---KIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKAD 212
K N+LL+ K +I DFG++ F E + ++ GT Y+APE V+HG K D
Sbjct: 159 KPENLLLESKSKDANIRIIDFGLSTHF-EASKKMKDKI-GTAYYIAPE-VLHGTYDEKCD 215
Query: 213 VFSFGVVILELISG 226
V+S GV++ L+SG
Sbjct: 216 VWSTGVILYILLSG 229
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 111/271 (40%), Gaps = 49/271 (18%)
Query: 58 LGEGGFGPVFKGKLDDGR----EIAVKKLSHSSNQGKKE-FENEAKLLARVQHRNVVNLL 112
LGEG FG V++G + + +AVK KE F +EA ++ + H ++V L+
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 113 GYCAHGAEKLLIYEYVINE-------------SLDKVLFSL--------IKDIQILFRKK 151
G +++ Y E L VL+SL ++ I + R
Sbjct: 80 GIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHR-- 137
Query: 152 KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN-GYMAPEYVMHGHLSVK 210
DI NIL+ K+ DFG++R + ED+ + V +M+PE + +
Sbjct: 138 --DIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWMSPESINFRRFTTA 194
Query: 211 ADVFSFGVVILELISGQRNSSFNLD-VDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGD 269
+DV+ F V + E++S + F L+ D +L+ +L K D + P L
Sbjct: 195 SDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPD----LCPPVLYT----- 245
Query: 270 QIAMCIQIGLLCTQGDPQLRPTMRRVVVMLS 300
+ C DP RP +V LS
Sbjct: 246 -------LMTRCWDYDPSDRPRFTELVCSLS 269
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 87/198 (43%), Gaps = 33/198 (16%)
Query: 58 LGEGGFGPVFKGK-LDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
LG+G +G V+ G+ L + IA+K++ ++ + E L ++H+N+V LG +
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 117 HGAEKLLIYEYVINESLDKVLFS------------------------LIKDIQILFRKKK 152
+ E V SL +L S + D QI+ R
Sbjct: 76 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHR--- 132
Query: 153 TDIKASNILLDD-KWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHG--HLSV 209
DIK N+L++ + KI+DFG ++ T GT YMAPE + G
Sbjct: 133 -DIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET-FTGTLQYMAPEIIDKGPRGYGK 190
Query: 210 KADVFSFGVVILELISGQ 227
AD++S G I+E+ +G+
Sbjct: 191 AADIWSLGCTIIEMATGK 208
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 93/203 (45%), Gaps = 30/203 (14%)
Query: 52 FHPSNKLGEGGFGPVFKGK-----LDDGREIAVKKLSHSSNQG--KKEFENEAKLLARVQ 104
+ +LG G F V K + L + K+ + SS +G +++ E E +L +Q
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 105 HRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLF---SLIKDIQILFRKK---------- 151
H NV+ L + + +LI E V L L SL ++ F K+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 152 ----KTDIKASNILLDDKWIPK----IADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVM 203
D+K NI+L D+ +PK I DFG+A D + + GT ++APE V
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIVN 190
Query: 204 HGHLSVKADVFSFGVVILELISG 226
+ L ++AD++S GV+ L+SG
Sbjct: 191 YEPLGLEADMWSIGVITYILLSG 213
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 131/308 (42%), Gaps = 52/308 (16%)
Query: 40 FPFEALVSATKNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKL 99
P + K ++G+G +G V+ GK G ++AVK + ++ + E E
Sbjct: 27 LPLLVQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVK-VFFTTEEASWFRETEIYQ 84
Query: 100 LARVQHRNVVNLLGYCAHGA-------------EKLLIYEYVINESLD-----KVLFSLI 141
++H N++ + G E +Y+Y+ + +LD K+ +S +
Sbjct: 85 TVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSV 144
Query: 142 KDI-----QILFRKKK-----TDIKASNILLDDKWIPKIADFGMARLFPEDQTHV----N 187
+ +I + K D+K+ NIL+ IAD G+A F D V N
Sbjct: 145 SGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPN 204
Query: 188 TRVAGTNGYMAPEYV------MHGHLSVKADVFSFGVVILEL----ISGQRNSSFNLDVD 237
TRV GT YM PE + H + AD++SFG+++ E+ +SG + L
Sbjct: 205 TRV-GTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYH 263
Query: 238 AQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCI-QIGLL---CTQGDPQLRPTMR 293
D +Y+ ++ ++ + PS S D+ C+ Q+G L C +P R T
Sbjct: 264 DLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDE---CLRQMGKLMTECWAHNPASRLTAL 320
Query: 294 RVVVMLSK 301
RV L+K
Sbjct: 321 RVKKTLAK 328
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 90/195 (46%), Gaps = 25/195 (12%)
Query: 58 LGEGGFGPVFKGKLDDGR-EIAVKKLSHSSNQGK-KEFENEAKLLARVQHRNVVNLLGYC 115
+GEG +G V + + +A+KK+S +Q + E K+L R +H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 116 AHGAEKLLIYEYVINESLDKVLFSLIKD------------IQILFRKKKT--------DI 155
+ + Y++ + ++ L+ L+K QIL K D+
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 150
Query: 156 KASNILLDDKWIPKIADFGMARLFPEDQTHVN--TRVAGTNGYMAPEYVMHGHLSVKA-D 212
K SN+LL+ KI DFG+AR+ D H T T Y APE +++ K+ D
Sbjct: 151 KPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 210
Query: 213 VFSFGVVILELISGQ 227
++S G ++ E++S +
Sbjct: 211 IWSVGCILAEMLSNR 225
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 86/211 (40%), Gaps = 35/211 (16%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLD------DGREIAVKKLSH-SSNQGKKEFENEAKLLAR 102
KN LG G FG V++G++ ++AVK L S Q + +F EA ++++
Sbjct: 31 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 90
Query: 103 VQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKV------------------LFSLIKDI 144
H+N+V +G + ++ E + L L + +DI
Sbjct: 91 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 150
Query: 145 QILFRKKKT------DIKASNILLDDKW---IPKIADFGMAR-LFPEDQTHVNTRVAGTN 194
+ + DI A N LL + KI DFGMA+ ++
Sbjct: 151 ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPV 210
Query: 195 GYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
+M PE M G + K D +SFGV++ E+ S
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 31/200 (15%)
Query: 52 FHPSNKLGEGGFGPVFKGKLDDGREIAVKKLS-HSSNQGKKEFE-NEAKLLARVQHRNVV 109
+H K+GEG +G V+K + + G A+KK+ ++G E +L ++H N+V
Sbjct: 4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 110 NLLGYCAHGAEKLLIYEYVINESLDKVL----------------------FSLIKDIQIL 147
L +L++E+ +++ L K+L + D ++L
Sbjct: 64 KLYDVIHTKKRLVLVFEH-LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVL 122
Query: 148 FRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHG-H 206
R D+K N+L++ + KIADFG+AR F + T Y AP+ +M
Sbjct: 123 HR----DLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-TLWYRAPDVLMGSKK 177
Query: 207 LSVKADVFSFGVVILELISG 226
S D++S G + E+++G
Sbjct: 178 YSTTIDIWSVGCIFAEMVNG 197
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 89/201 (44%), Gaps = 39/201 (19%)
Query: 58 LGEGGFGPVFKGKL-DDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
+G G FG V++ KL D G +A+KK+ QGK E +++ ++ H N+V L +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVL----QGKAFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 117 HGAEKLLIYEYVINESLDKVLFSLIKDIQILFRKKKT----------------------- 153
EK E +N LD V ++ + + R K+T
Sbjct: 84 SSGEKK--DEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 154 -----DIKASNILLD-DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH- 206
DIK N+LLD D + K+ DFG A+ + +V+ + Y APE +
Sbjct: 142 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRAPELIFGATD 199
Query: 207 LSVKADVFSFGVVILELISGQ 227
+ DV+S G V+ EL+ GQ
Sbjct: 200 YTSSIDVWSAGCVLAELLLGQ 220
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 98/216 (45%), Gaps = 27/216 (12%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLD-DGREIAVKKLS-HSSNQGKKEFE-NEAKLLARVQHR 106
+NF K+GEG +G V+K + G +A+ K+ + +G E LL + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 107 NVVNLLGYCAHGAEKL-LIYEYVINE--------SLDKVLFSLIKD--IQIL-------- 147
N+V LL H KL L++E++ + +L + LIK Q+L
Sbjct: 63 NIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 148 FRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHG-H 206
R D+K N+L++ + K+ADFG+AR F T T Y APE ++ +
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGCKY 180
Query: 207 LSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLL 242
S D++S G + E+++ R + F D + L
Sbjct: 181 YSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 214
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 98/216 (45%), Gaps = 27/216 (12%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLD-DGREIAVKKLS-HSSNQGKKEFE-NEAKLLARVQHR 106
+NF K+GEG +G V+K + G +A+ K+ + +G E LL + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 107 NVVNLLGYCAHGAEKL-LIYEYVINE--------SLDKVLFSLIKD--IQIL-------- 147
N+V LL H KL L++E++ + +L + LIK Q+L
Sbjct: 62 NIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 148 FRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHG-H 206
R D+K N+L++ + K+ADFG+AR F T T Y APE ++ +
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 207 LSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLL 242
S D++S G + E+++ R + F D + L
Sbjct: 180 YSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLF 213
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 93/203 (45%), Gaps = 30/203 (14%)
Query: 52 FHPSNKLGEGGFGPVFKGK-----LDDGREIAVKKLSHSSNQG--KKEFENEAKLLARVQ 104
+ +LG G F V K + L + K+ + SS +G +++ E E +L +Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 105 HRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLF---SLIKDIQILFRKK---------- 151
H NV+ L + + +LI E V L L SL ++ F K+
Sbjct: 73 HPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 152 ----KTDIKASNILLDDKWIPK----IADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVM 203
D+K NI+L D+ +PK I DFG+A D + + GT ++APE V
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIVN 190
Query: 204 HGHLSVKADVFSFGVVILELISG 226
+ L ++AD++S GV+ L+SG
Sbjct: 191 YEPLGLEADMWSIGVITYILLSG 213
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 37/200 (18%)
Query: 58 LGEGGFGPVFKGKL-DDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
+G G FG V++ KL D G +A+KK+ QGK E +++ ++ H N+V L +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVL----QGKAFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 117 HGAEKL------LIYEYVINESLDKV-------------------LFSLIKDIQIL--FR 149
EK L+ +YV E++ +V ++ L + + + F
Sbjct: 84 SSGEKKDEVYLNLVLDYV-PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 142
Query: 150 KKKTDIKASNILLD-DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH-L 207
DIK N+LLD D + K+ DFG A+ + +V+ + Y APE +
Sbjct: 143 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYYRAPELIFGATDY 200
Query: 208 SVKADVFSFGVVILELISGQ 227
+ DV+S G V+ EL+ GQ
Sbjct: 201 TSSIDVWSAGCVLAELLLGQ 220
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 87/191 (45%), Gaps = 27/191 (14%)
Query: 58 LGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAH 117
+G+G FG V G G ++AVK + + + + F EA ++ +++H N+V LLG
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 118 GAEKL-LIYEYVINESLDKVLFS-----LIKDIQILFRKKKT--------------DIKA 157
L ++ EY+ SL L S L D + F D+ A
Sbjct: 77 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAA 136
Query: 158 SNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFG 217
N+L+ + + K++DFG+ + Q V T APE + S K+DV+SFG
Sbjct: 137 RNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREAAFSTKSDVWSFG 192
Query: 218 VVILELISGQR 228
+++ E+ S R
Sbjct: 193 ILLWEIYSFGR 203
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 37/200 (18%)
Query: 58 LGEGGFGPVFKGKL-DDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
+G G FG V++ KL D G +A+KK+ QGK E +++ ++ H N+V L +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVL----QGKAFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 117 HGAEKL------LIYEYVINESLDKV-------------------LFSLIKDIQIL--FR 149
EK L+ +YV E++ +V ++ L + + + F
Sbjct: 84 SSGEKKDEVYLNLVLDYV-PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 142
Query: 150 KKKTDIKASNILLD-DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH-L 207
DIK N+LLD D + K+ DFG A+ + +V+ + Y APE +
Sbjct: 143 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYYRAPELIFGATDY 200
Query: 208 SVKADVFSFGVVILELISGQ 227
+ DV+S G V+ EL+ GQ
Sbjct: 201 TSSIDVWSAGCVLAELLLGQ 220
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 99/233 (42%), Gaps = 39/233 (16%)
Query: 28 DLEKIAAREQKHFPFEALVSATKNFHPS------------NKLGEGGFGPVFKGKLDDGR 75
D + + R K E V+A F+ S +G+G FG V G G
Sbjct: 159 DADGLCTRLIKPKVMEGTVAAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDYR-GN 217
Query: 76 EIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKL-LIYEYVINESLD 134
++AVK + + + + F EA ++ +++H N+V LLG L ++ EY+ SL
Sbjct: 218 KVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 275
Query: 135 KVLFS-----LIKDIQILFRKKKT--------------DIKASNILLDDKWIPKIADFGM 175
L S L D + F D+ A N+L+ + + K++DFG+
Sbjct: 276 DYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGL 335
Query: 176 ARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVVILELISGQR 228
+ Q V T APE + S K+DV+SFG+++ E+ S R
Sbjct: 336 TKEASSTQDTGKLPVKWT----APEALREKKFSTKSDVWSFGILLWEIYSFGR 384
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 32/210 (15%)
Query: 47 SATKNFHPSNKLGEGGFGPVFK-GKLDDGREIAVKKLSHSS--NQGKKEFENEAKLLARV 103
S +++ +G G +G K + DG+ + K+L + S K+ +E LL +
Sbjct: 3 SRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL 62
Query: 104 QHRNVVN---------------LLGYCAHGAEKLLIY------EYVINESLDKVLFSLIK 142
+H N+V ++ YC G +I +Y+ E + +V+ L
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122
Query: 143 DIQILFRKK-------KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNG 195
++ R+ D+K +N+ LD K K+ DFG+AR+ D+ V GT
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFV-GTPY 181
Query: 196 YMAPEYVMHGHLSVKADVFSFGVVILELIS 225
YM+PE + + K+D++S G ++ EL +
Sbjct: 182 YMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 89/197 (45%), Gaps = 23/197 (11%)
Query: 51 NFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQG--KKEFENEAKLLARVQHRNV 108
+F ++LG G G V K + I +KL H + + + E ++L +
Sbjct: 17 DFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 76
Query: 109 VNLLGYCAHGAEKLLIYEYVINESLDKVL---------------FSLIKDIQILFRKKKT 153
V G E + E++ SLD+VL ++++ + L K +
Sbjct: 77 VGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQI 136
Query: 154 ---DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVK 210
D+K SNIL++ + K+ DFG++ + + GT YMAPE + H SV+
Sbjct: 137 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN---SFVGTRSYMAPERLQGTHYSVQ 193
Query: 211 ADVFSFGVVILELISGQ 227
+D++S G+ ++EL G+
Sbjct: 194 SDIWSMGLSLVELAVGR 210
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 39/201 (19%)
Query: 58 LGEGGFGPVFKGKL-DDGREIAVKKLSHSSNQGKKEFEN-EAKLLARVQHRNVVNLLGYC 115
+G G FG V++ KL D G +A+KK+ K F+N E +++ ++ H N+V L +
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 116
Query: 116 AHGAEKL------LIYEYVINESLDKV-------------------LFSLIKDIQIL--F 148
EK L+ +YV E++ +V ++ L + + + F
Sbjct: 117 YSSGEKKDEVYLNLVLDYV-PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 175
Query: 149 RKKKTDIKASNILLD-DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH- 206
DIK N+LLD D + K+ DFG A+ + +V+ + Y APE +
Sbjct: 176 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRAPELIFGATD 233
Query: 207 LSVKADVFSFGVVILELISGQ 227
+ DV+S G V+ EL+ GQ
Sbjct: 234 YTSSIDVWSAGCVLAELLLGQ 254
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 39/201 (19%)
Query: 58 LGEGGFGPVFKGKL-DDGREIAVKKLSHSSNQGKKEFEN-EAKLLARVQHRNVVNLLGYC 115
+G G FG V++ KL D G +A+KK+ K F+N E +++ ++ H N+V L +
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 116
Query: 116 AHGAEKL------LIYEYVINESLDKV-------------------LFSLIKDIQIL--F 148
EK L+ +YV E++ +V ++ L + + + F
Sbjct: 117 YSSGEKKDEVYLNLVLDYV-PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 175
Query: 149 RKKKTDIKASNILLD-DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH- 206
DIK N+LLD D + K+ DFG A+ + +V+ + Y APE +
Sbjct: 176 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYYRAPELIFGATD 233
Query: 207 LSVKADVFSFGVVILELISGQ 227
+ DV+S G V+ EL+ GQ
Sbjct: 234 YTSSIDVWSAGCVLAELLLGQ 254
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 43/203 (21%)
Query: 58 LGEGGFGPVFKGKL-DDGREIAVKKLSHSSNQGKKEFEN-EAKLLARVQHRNVVNL-LGY 114
+G G FG V++ KL D G +A+KK+ K F+N E +++ ++ H N+V L +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 115 CAHGAEKLLIYEYVINESLDKVLFSLIKDIQILFRKKKT--------------------- 153
+ G +K ++Y +N LD V ++ + + R K+T
Sbjct: 83 YSSGEKKDVVY---LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 154 -------DIKASNILLD-DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHG 205
DIK N+LLD D + K+ DFG A+ + +V+ + Y APE +
Sbjct: 140 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRAPELIFGA 197
Query: 206 H-LSVKADVFSFGVVILELISGQ 227
+ DV+S G V+ EL+ GQ
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 39/201 (19%)
Query: 58 LGEGGFGPVFKGKL-DDGREIAVKKLSHSSNQGKKEFEN-EAKLLARVQHRNVVNLLGYC 115
+G G FG V++ KL D G +A+KK+ K F+N E +++ ++ H N+V L +
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 118
Query: 116 AHGAEKL------LIYEYVINESLDKV-------------------LFSLIKDIQIL--F 148
EK L+ +YV E++ +V ++ L + + + F
Sbjct: 119 YSSGEKKDEVYLNLVLDYV-PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 177
Query: 149 RKKKTDIKASNILLD-DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH- 206
DIK N+LLD D + K+ DFG A+ + +V+ + Y APE +
Sbjct: 178 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYYRAPELIFGATD 235
Query: 207 LSVKADVFSFGVVILELISGQ 227
+ DV+S G V+ EL+ GQ
Sbjct: 236 YTSSIDVWSAGCVLAELLLGQ 256
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 39/201 (19%)
Query: 58 LGEGGFGPVFKGKL-DDGREIAVKKLSHSSNQGKKEFEN-EAKLLARVQHRNVVNLLGYC 115
+G G FG V++ KL D G +A+KK+ K F+N E +++ ++ H N+V L +
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 110
Query: 116 AHGAEKL------LIYEYVINESLDKV-------------------LFSLIKDIQIL--F 148
EK L+ +YV E++ +V ++ L + + + F
Sbjct: 111 YSSGEKKDEVYLNLVLDYV-PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 169
Query: 149 RKKKTDIKASNILLD-DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH- 206
DIK N+LLD D + K+ DFG A+ + +V+ + Y APE +
Sbjct: 170 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYYRAPELIFGATD 227
Query: 207 LSVKADVFSFGVVILELISGQ 227
+ DV+S G V+ EL+ GQ
Sbjct: 228 YTSSIDVWSAGCVLAELLLGQ 248
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 93/196 (47%), Gaps = 28/196 (14%)
Query: 58 LGEGGFGPVFKGKLD-DGREIAVKKLSHSSNQGKKEFEN---EAKLLARVQHRNVVNLLG 113
LG GGFG VF ++ G+ A KKL+ + +K ++ E K+LA+V R +V+L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL-A 251
Query: 114 YCAHGAEKLLIYEYVIN--------ESLD---------KVLF---SLIKDIQILFRKK-- 151
Y L + ++N ++D + +F ++ ++ L ++
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNII 311
Query: 152 KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKA 211
D+K N+LLDD +I+D G+A QT AGT G+MAPE ++
Sbjct: 312 YRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG-YAGTPGFMAPELLLGEEYDFSV 370
Query: 212 DVFSFGVVILELISGQ 227
D F+ GV + E+I+ +
Sbjct: 371 DYFALGVTLYEMIAAR 386
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 39/201 (19%)
Query: 58 LGEGGFGPVFKGKL-DDGREIAVKKLSHSSNQGKKEFEN-EAKLLARVQHRNVVNLLGYC 115
+G G FG V++ KL D G +A+KK+ K F+N E +++ ++ H N+V L +
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 120
Query: 116 AHGAEKL------LIYEYVINESLDKV-------------------LFSLIKDIQIL--F 148
EK L+ +YV E++ +V ++ L + + + F
Sbjct: 121 YSSGEKKDEVYLNLVLDYV-PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 179
Query: 149 RKKKTDIKASNILLD-DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH- 206
DIK N+LLD D + K+ DFG A+ + +V+ + Y APE +
Sbjct: 180 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYYRAPELIFGATD 237
Query: 207 LSVKADVFSFGVVILELISGQ 227
+ DV+S G V+ EL+ GQ
Sbjct: 238 YTSSIDVWSAGCVLAELLLGQ 258
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 93/196 (47%), Gaps = 28/196 (14%)
Query: 58 LGEGGFGPVFKGKLD-DGREIAVKKLSHSSNQGKKEFEN---EAKLLARVQHRNVVNLLG 113
LG GGFG VF ++ G+ A KKL+ + +K ++ E K+LA+V R +V+L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL-A 251
Query: 114 YCAHGAEKLLIYEYVIN--------ESLD---------KVLF---SLIKDIQILFRKK-- 151
Y L + ++N ++D + +F ++ ++ L ++
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNII 311
Query: 152 KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKA 211
D+K N+LLDD +I+D G+A QT AGT G+MAPE ++
Sbjct: 312 YRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG-YAGTPGFMAPELLLGEEYDFSV 370
Query: 212 DVFSFGVVILELISGQ 227
D F+ GV + E+I+ +
Sbjct: 371 DYFALGVTLYEMIAAR 386
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 93/196 (47%), Gaps = 28/196 (14%)
Query: 58 LGEGGFGPVFKGKLD-DGREIAVKKLSHSSNQGKKEFEN---EAKLLARVQHRNVVNLLG 113
LG GGFG VF ++ G+ A KKL+ + +K ++ E K+LA+V R +V+L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL-A 251
Query: 114 YCAHGAEKLLIYEYVIN--------ESLD---------KVLF---SLIKDIQILFRKK-- 151
Y L + ++N ++D + +F ++ ++ L ++
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNII 311
Query: 152 KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKA 211
D+K N+LLDD +I+D G+A QT AGT G+MAPE ++
Sbjct: 312 YRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG-YAGTPGFMAPELLLGEEYDFSV 370
Query: 212 DVFSFGVVILELISGQ 227
D F+ GV + E+I+ +
Sbjct: 371 DYFALGVTLYEMIAAR 386
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 17/177 (9%)
Query: 123 LIYEYVINESLDKVLFSLIKDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMARLFP 180
L +++ E L F + K ++ L +K D+ A NILL +K + KI DFG+AR
Sbjct: 192 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 251
Query: 181 EDQTHVNTRVAGTN-GYMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQ 239
+D +V A +MAPE + ++++DV+SFGV++ E+ S + + +D +
Sbjct: 252 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 311
Query: 240 NLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
K + ++ + P + Q L C G+P RPT +V
Sbjct: 312 FCR--RLKEGTRMRAPDYTTPEM------------YQTMLDCWHGEPSQRPTFSELV 354
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 9/91 (9%)
Query: 58 LGEGGFGPVFKG------KLDDGREIAVKKLSHSSNQGK-KEFENEAKLLARV-QHRNVV 109
LG G FG V + K R +AVK L + + + +E K+L + H NVV
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 110 NLLGYCAH-GAEKLLIYEYVINESLDKVLFS 139
NLLG C G ++I E+ +L L S
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRS 127
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 99/234 (42%), Gaps = 43/234 (18%)
Query: 34 AREQKHFPFEALVSATKNFHPSNKLGEGGFGPV-FKGKLDDGREIAVKKLSHSSNQGKKE 92
RE +F ++ K++ KLGEGGF V L DG A+K++ Q ++E
Sbjct: 13 GRENLYFQGHMVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREE 72
Query: 93 FENEAKLLARVQHRNVVNLLGYCA------HGAEKLLIY-----------------EYVI 129
+ EA + H N++ L+ YC H A LL + ++
Sbjct: 73 AQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLT 132
Query: 130 NESLDKVLFSLIKDIQILFRK--KKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVN 187
+ + +L + + ++ + K D+K +NILL D+ P + D G + HV
Sbjct: 133 EDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMN---QACIHVE 189
Query: 188 -TRVA----------GTNGYMAPE-YVMHGHLSV--KADVFSFGVVILELISGQ 227
+R A T Y APE + + H + + DV+S G V+ ++ G+
Sbjct: 190 GSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGE 243
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 34/198 (17%)
Query: 58 LGEGGFGPVFKGK----LDDGREIAVKKLSHS----SNQGKKEFENEAKLLARVQHRNVV 109
LG+GG+G VF+ + + G+ A+K L + + + + E +L V+H +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 110 NLLGYCAHGAEKLLIYEYVINESL------------DKVLFSL---------IKDIQILF 148
+L+ G + LI EY+ L D F L + I++
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIY 144
Query: 149 RKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLS 208
R D+K NI+L+ + K+ DFG+ + D T +T GT YMAPE +M +
Sbjct: 145 R----DLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT-FCGTIEYMAPEILMRSGHN 199
Query: 209 VKADVFSFGVVILELISG 226
D +S G ++ ++++G
Sbjct: 200 RAVDWWSLGALMYDMLTG 217
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 93/196 (47%), Gaps = 28/196 (14%)
Query: 58 LGEGGFGPVFKGKLD-DGREIAVKKLSHSSNQGKKEFEN---EAKLLARVQHRNVVNLLG 113
LG GGFG VF ++ G+ A KKL+ + +K ++ E K+LA+V R +V+L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL-A 251
Query: 114 YCAHGAEKLLIYEYVIN--------ESLD---------KVLF---SLIKDIQILFRKK-- 151
Y L + ++N ++D + +F ++ ++ L ++
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNII 311
Query: 152 KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKA 211
D+K N+LLDD +I+D G+A QT AGT G+MAPE ++
Sbjct: 312 YRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG-YAGTPGFMAPELLLGEEYDFSV 370
Query: 212 DVFSFGVVILELISGQ 227
D F+ GV + E+I+ +
Sbjct: 371 DYFALGVTLYEMIAAR 386
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 17/177 (9%)
Query: 123 LIYEYVINESLDKVLFSLIKDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMARLFP 180
L +++ E L F + K ++ L +K D+ A NILL +K + KI DFG+AR
Sbjct: 185 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 244
Query: 181 EDQTHVNTRVAGTN-GYMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQ 239
+D +V A +MAPE + ++++DV+SFGV++ E+ S + + +D +
Sbjct: 245 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 304
Query: 240 NLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
K + ++ + P + Q L C G+P RPT +V
Sbjct: 305 FCR--RLKEGTRMRAPDYTTPEM------------YQTMLDCWHGEPSQRPTFSELV 347
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 9/91 (9%)
Query: 58 LGEGGFGPVFKG------KLDDGREIAVKKLSHSSNQGK-KEFENEAKLLARV-QHRNVV 109
LG G FG V + K R +AVK L + + + +E K+L + H NVV
Sbjct: 30 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 89
Query: 110 NLLGYCAH-GAEKLLIYEYVINESLDKVLFS 139
NLLG C G ++I E+ +L L S
Sbjct: 90 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRS 120
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 39/201 (19%)
Query: 58 LGEGGFGPVFKGKL-DDGREIAVKKLSHSSNQGKKEFEN-EAKLLARVQHRNVVNLLGYC 115
+G G FG V++ KL D G +A+KK+ K F+N E +++ ++ H N+V L +
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 101
Query: 116 AHGAEKL------LIYEYVINESLDKV-------------------LFSLIKDIQIL--F 148
EK L+ +YV E++ +V ++ L + + + F
Sbjct: 102 YSSGEKKDEVYLNLVLDYV-PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 160
Query: 149 RKKKTDIKASNILLD-DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH- 206
DIK N+LLD D + K+ DFG A+ + +V+ + Y APE +
Sbjct: 161 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRAPELIFGATD 218
Query: 207 LSVKADVFSFGVVILELISGQ 227
+ DV+S G V+ EL+ GQ
Sbjct: 219 YTSSIDVWSAGCVLAELLLGQ 239
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 94/194 (48%), Gaps = 29/194 (14%)
Query: 58 LGEGGFGPVF--KGKLDDGREIAVKKLSHSSNQGKKEFEN---EAKLLARVQHRNVVNLL 112
LG+G FG V K K+ G+E AVK +S + K + E+ E +LL ++ H N+ L
Sbjct: 34 LGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLY 92
Query: 113 GYCAHGAEKLLIYE-YVINESLDKVL----FSLIKDIQIL---------FRKKKT---DI 155
+ L+ E Y E D+++ FS + +I+ K K D+
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNKIVHRDL 152
Query: 156 KASNILLDDKWIP---KIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKAD 212
K N+LL+ K +I DFG++ F + + GT Y+APE V+HG K D
Sbjct: 153 KPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDK--IGTAYYIAPE-VLHGTYDEKCD 209
Query: 213 VFSFGVVILELISG 226
V+S GV++ L+SG
Sbjct: 210 VWSTGVILYILLSG 223
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 17/177 (9%)
Query: 123 LIYEYVINESLDKVLFSLIKDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMARLFP 180
L +++ E L F + K ++ L +K D+ A NILL +K + KI DFG+AR
Sbjct: 190 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 249
Query: 181 EDQTHVNTRVAGTN-GYMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQ 239
+D +V A +MAPE + ++++DV+SFGV++ E+ S + + +D +
Sbjct: 250 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 309
Query: 240 NLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
K + ++ + P + Q L C G+P RPT +V
Sbjct: 310 FCR--RLKEGTRMRAPDYTTPEM------------YQTMLDCWHGEPSQRPTFSELV 352
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 9/91 (9%)
Query: 58 LGEGGFGPVFKG------KLDDGREIAVKKLSHSSNQGK-KEFENEAKLLARV-QHRNVV 109
LG G FG V + K R +AVK L + + + +E K+L + H NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 110 NLLGYCAH-GAEKLLIYEYVINESLDKVLFS 139
NLLG C G ++I E+ +L L S
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRS 125
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 39/201 (19%)
Query: 58 LGEGGFGPVFKGKL-DDGREIAVKKLSHSSNQGKKEFEN-EAKLLARVQHRNVVNLLGYC 115
+G G FG V++ KL D G +A+KK+ K F+N E +++ ++ H N+V L +
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 161
Query: 116 AHGAEKL------LIYEYVINESLDKV-------------------LFSLIKDIQIL--F 148
EK L+ +YV E++ +V ++ L + + + F
Sbjct: 162 YSSGEKKDEVYLNLVLDYV-PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 220
Query: 149 RKKKTDIKASNILLD-DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH- 206
DIK N+LLD D + K+ DFG A+ + +V+ + Y APE +
Sbjct: 221 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYYRAPELIFGATD 278
Query: 207 LSVKADVFSFGVVILELISGQ 227
+ DV+S G V+ EL+ GQ
Sbjct: 279 YTSSIDVWSAGCVLAELLLGQ 299
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 39/201 (19%)
Query: 58 LGEGGFGPVFKGKL-DDGREIAVKKLSHSSNQGKKEFEN-EAKLLARVQHRNVVNLLGYC 115
+G G FG V++ KL D G +A+KK+ K F+N E +++ ++ H N+V L +
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 90
Query: 116 AHGAEKL------LIYEYVINESLDKV-------------------LFSLIKDIQIL--F 148
EK L+ +YV E++ +V ++ L + + + F
Sbjct: 91 YSSGEKKDEVYLNLVLDYV-PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 149
Query: 149 RKKKTDIKASNILLD-DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH- 206
DIK N+LLD D + K+ DFG A+ + +V+ + Y APE +
Sbjct: 150 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRAPELIFGATD 207
Query: 207 LSVKADVFSFGVVILELISGQ 227
+ DV+S G V+ EL+ GQ
Sbjct: 208 YTSSIDVWSAGCVLAELLLGQ 228
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 39/201 (19%)
Query: 58 LGEGGFGPVFKGKL-DDGREIAVKKLSHSSNQGKKEFEN-EAKLLARVQHRNVVNLLGYC 115
+G G FG V++ KL D G +A+KK+ K F+N E +++ ++ H N+V L +
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 94
Query: 116 AHGAEKL------LIYEYVINESLDKV-------------------LFSLIKDIQIL--F 148
EK L+ +YV E++ +V ++ L + + + F
Sbjct: 95 YSSGEKKDEVYLNLVLDYV-PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 153
Query: 149 RKKKTDIKASNILLD-DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH- 206
DIK N+LLD D + K+ DFG A+ + +V+ + Y APE +
Sbjct: 154 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRAPELIFGATD 211
Query: 207 LSVKADVFSFGVVILELISGQ 227
+ DV+S G V+ EL+ GQ
Sbjct: 212 YTSSIDVWSAGCVLAELLLGQ 232
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 39/201 (19%)
Query: 58 LGEGGFGPVFKGKL-DDGREIAVKKLSHSSNQGKKEFEN-EAKLLARVQHRNVVNLLGYC 115
+G G FG V++ KL D G +A+KK+ K F+N E +++ ++ H N+V L +
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 94
Query: 116 AHGAEKL------LIYEYVINESLDKV-------------------LFSLIKDIQIL--F 148
EK L+ +YV E++ +V ++ L + + + F
Sbjct: 95 YSSGEKKDEVYLNLVLDYV-PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 153
Query: 149 RKKKTDIKASNILLD-DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH- 206
DIK N+LLD D + K+ DFG A+ + +V+ + Y APE +
Sbjct: 154 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRAPELIFGATD 211
Query: 207 LSVKADVFSFGVVILELISGQ 227
+ DV+S G V+ EL+ GQ
Sbjct: 212 YTSSIDVWSAGCVLAELLLGQ 232
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 97/214 (45%), Gaps = 44/214 (20%)
Query: 57 KLGEGGFGPVFKGKLD--DGREIAVKKLS---HSSNQGKKEFENEAKLLARVQHRNVVNL 111
KLG+G +G V+K +D G +AVKK+ +S ++ F L H N+VNL
Sbjct: 16 KLGKGAYGIVWKS-IDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNL 74
Query: 112 LGYCAHGAEK--LLIYEYV-----------INESLDK--VLFSLIKDIQILFRKK--KTD 154
L ++ L+++Y+ I E + K V++ LIK I+ L D
Sbjct: 75 LNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHRD 134
Query: 155 IKASNILLDDKWIPKIADFGMARLFP--------------------EDQTHVNTRVAGTN 194
+K SNILL+ + K+ADFG++R F +D + T T
Sbjct: 135 MKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATR 194
Query: 195 GYMAPEYVMHGHLSVKA-DVFSFGVVILELISGQ 227
Y APE ++ K D++S G ++ E++ G+
Sbjct: 195 WYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 87/191 (45%), Gaps = 27/191 (14%)
Query: 58 LGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAH 117
+G+G FG V G G ++AVK + + + + F EA ++ +++H N+V LLG
Sbjct: 29 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 118 GAEKL-LIYEYVINESLDKVLFS-----LIKDIQILFRKKKT--------------DIKA 157
L ++ EY+ SL L S L D + F D+ A
Sbjct: 86 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAA 145
Query: 158 SNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFG 217
N+L+ + + K++DFG+ + Q V T APE + S K+DV+SFG
Sbjct: 146 RNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFSTKSDVWSFG 201
Query: 218 VVILELISGQR 228
+++ E+ S R
Sbjct: 202 ILLWEIYSFGR 212
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 17/177 (9%)
Query: 123 LIYEYVINESLDKVLFSLIKDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMARLFP 180
L +++ E L F + K ++ L +K D+ A NILL +K + KI DFG+AR
Sbjct: 183 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 242
Query: 181 EDQTHVNTRVAGTN-GYMAPEYVMHGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQ 239
+D +V A +MAPE + ++++DV+SFGV++ E+ S + + +D +
Sbjct: 243 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 302
Query: 240 NLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
K + ++ + P + Q L C G+P RPT +V
Sbjct: 303 FCR--RLKEGTRMRAPDYTTPEM------------YQTMLDCWHGEPSQRPTFSELV 345
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 9/91 (9%)
Query: 58 LGEGGFGPVFKG------KLDDGREIAVKKLSHSSNQGK-KEFENEAKLLARV-QHRNVV 109
LG G FG V + K R +AVK L + + + +E K+L + H NVV
Sbjct: 28 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 87
Query: 110 NLLGYCAH-GAEKLLIYEYVINESLDKVLFS 139
NLLG C G ++I E+ +L L S
Sbjct: 88 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRS 118
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 39/201 (19%)
Query: 58 LGEGGFGPVFKGKL-DDGREIAVKKLSHSSNQGKKEFEN-EAKLLARVQHRNVVNLLGYC 115
+G G FG V++ KL D G +A+KK+ K F+N E +++ ++ H N+V L +
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 87
Query: 116 AHGAEKL------LIYEYVINESLDKV-------------------LFSLIKDIQIL--F 148
EK L+ +YV E++ +V ++ L + + + F
Sbjct: 88 YSSGEKKDEVYLNLVLDYV-PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 146
Query: 149 RKKKTDIKASNILLD-DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH- 206
DIK N+LLD D + K+ DFG A+ + +V+ + Y APE +
Sbjct: 147 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYYRAPELIFGATD 204
Query: 207 LSVKADVFSFGVVILELISGQ 227
+ DV+S G V+ EL+ GQ
Sbjct: 205 YTSSIDVWSAGCVLAELLLGQ 225
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 39/201 (19%)
Query: 58 LGEGGFGPVFKGKL-DDGREIAVKKLSHSSNQGKKEFEN-EAKLLARVQHRNVVNLLGYC 115
+G G FG V++ KL D G +A+KK+ K F+N E +++ ++ H N+V L +
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 95
Query: 116 AHGAEKL------LIYEYVINESLDKV-------------------LFSLIKDIQIL--F 148
EK L+ +YV E++ +V ++ L + + + F
Sbjct: 96 YSSGEKKDEVYLNLVLDYV-PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 154
Query: 149 RKKKTDIKASNILLD-DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH- 206
DIK N+LLD D + K+ DFG A+ + +V+ + Y APE +
Sbjct: 155 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYYRAPELIFGATD 212
Query: 207 LSVKADVFSFGVVILELISGQ 227
+ DV+S G V+ EL+ GQ
Sbjct: 213 YTSSIDVWSAGCVLAELLLGQ 233
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 90/196 (45%), Gaps = 27/196 (13%)
Query: 58 LGEGGFGPVFKG--KLDDGREIAVKKLSHSSNQGK-KEFENEAKLLARVQHRNVVNLLGY 114
+GEG +G V L+ R +A+KK+S +Q + E K+L R +H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 93
Query: 115 CAHGAEKLLIYEYVINESLDKVLFSLIKD------------IQILFRKKKT--------D 154
+ + Y++ + ++ L+ L+K QIL K D
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRD 153
Query: 155 IKASNILLDDKWIPKIADFGMARLFPEDQTHVN--TRVAGTNGYMAPEYVMHGHLSVKA- 211
+K SN+LL+ KI DFG+AR+ D H T Y APE +++ K+
Sbjct: 154 LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSI 213
Query: 212 DVFSFGVVILELISGQ 227
D++S G ++ E++S +
Sbjct: 214 DIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 90/196 (45%), Gaps = 27/196 (13%)
Query: 58 LGEGGFGPVFKG--KLDDGREIAVKKLSHSSNQGK-KEFENEAKLLARVQHRNVVNLLGY 114
+GEG +G V L+ R +A+KK+S +Q + E K+L R +H N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 94
Query: 115 CAHGAEKLLIYEYVINESLDKVLFSLIKD------------IQILFRKKKT--------D 154
+ + Y++ + ++ L+ L+K QIL K D
Sbjct: 95 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRD 154
Query: 155 IKASNILLDDKWIPKIADFGMARLFPEDQTHVN--TRVAGTNGYMAPEYVMHGHLSVKA- 211
+K SN+LL+ KI DFG+AR+ D H T Y APE +++ K+
Sbjct: 155 LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSI 214
Query: 212 DVFSFGVVILELISGQ 227
D++S G ++ E++S +
Sbjct: 215 DIWSVGCILAEMLSNR 230
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 39/201 (19%)
Query: 58 LGEGGFGPVFKGKL-DDGREIAVKKLSHSSNQGKKEFEN-EAKLLARVQHRNVVNLLGYC 115
+G G FG V++ KL D G +A+KK+ K F+N E +++ ++ H N+V L +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 116 AHGAEKL------LIYEYVINESLDKV-------------------LFSLIKDIQIL--F 148
EK L+ +YV E++ +V ++ L + + + F
Sbjct: 83 YSSGEKKDEVYLNLVLDYV-PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 149 RKKKTDIKASNILLD-DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH- 206
DIK N+LLD D + K+ DFG A+ + +V+ + Y APE +
Sbjct: 142 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRAPELIFGATD 199
Query: 207 LSVKADVFSFGVVILELISGQ 227
+ DV+S G V+ EL+ GQ
Sbjct: 200 YTSSIDVWSAGCVLAELLLGQ 220
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 87/191 (45%), Gaps = 27/191 (14%)
Query: 58 LGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAH 117
+G+G FG V G G ++AVK + + + + F EA ++ +++H N+V LLG
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 118 GAEKL-LIYEYVINESLDKVLFS-----LIKDIQILFRKKKT--------------DIKA 157
L ++ EY+ SL L S L D + F D+ A
Sbjct: 71 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAA 130
Query: 158 SNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFG 217
N+L+ + + K++DFG+ + Q V T APE + S K+DV+SFG
Sbjct: 131 RNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFSTKSDVWSFG 186
Query: 218 VVILELISGQR 228
+++ E+ S R
Sbjct: 187 ILLWEIYSFGR 197
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 39/201 (19%)
Query: 58 LGEGGFGPVFKGKL-DDGREIAVKKLSHSSNQGKKEFEN-EAKLLARVQHRNVVNLLGYC 115
+G G FG V++ KL D G +A+KK+ K F+N E +++ ++ H N+V L +
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 83
Query: 116 AHGAEKL------LIYEYVINESLDKV-------------------LFSLIKDIQIL--F 148
EK L+ +YV E++ +V ++ L + + + F
Sbjct: 84 YSSGEKKDEVYLNLVLDYV-PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 142
Query: 149 RKKKTDIKASNILLD-DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH- 206
DIK N+LLD D + K+ DFG A+ + +V+ + Y APE +
Sbjct: 143 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRAPELIFGATD 200
Query: 207 LSVKADVFSFGVVILELISGQ 227
+ DV+S G V+ EL+ GQ
Sbjct: 201 YTSSIDVWSAGCVLAELLLGQ 221
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 91/206 (44%), Gaps = 35/206 (16%)
Query: 50 KNFHPSNKLGEGGFGPVFKGK-LDDGREIAVKKLSHSSNQGK---KEFENEAKLLARVQH 105
++F N LG+G F V++ + + G E+A+K + + + +NE K+ +++H
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 106 RNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFSLIKDIQ-------------------- 145
+++ L Y L+ E N +++ L + +K
Sbjct: 71 PSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHS 130
Query: 146 --ILFRKKKTDIKASNILLDDKWIPKIADFGMARLF--PEDQTHVNTRVAGTNGYMAPEY 201
IL R D+ SN+LL KIADFG+A P ++ + + GT Y++PE
Sbjct: 131 HGILHR----DLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT---LCGTPNYISPEI 183
Query: 202 VMHGHLSVKADVFSFGVVILELISGQ 227
+++DV+S G + L+ G+
Sbjct: 184 ATRSAHGLESDVWSLGCMFYTLLIGR 209
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 34/198 (17%)
Query: 58 LGEGGFGPVFKGK----LDDGREIAVKKLSHS----SNQGKKEFENEAKLLARVQHRNVV 109
LG+GG+G VF+ + + G+ A+K L + + + + E +L V+H +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 110 NLLGYCAHGAEKLLIYEYVINESL------------DKVLFSL---------IKDIQILF 148
+L+ G + LI EY+ L D F L + I++
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIY 144
Query: 149 RKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLS 208
R D+K NI+L+ + K+ DFG+ + D T V GT YMAPE +M +
Sbjct: 145 R----DLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHXFCGTIEYMAPEILMRSGHN 199
Query: 209 VKADVFSFGVVILELISG 226
D +S G ++ ++++G
Sbjct: 200 RAVDWWSLGALMYDMLTG 217
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 39/201 (19%)
Query: 58 LGEGGFGPVFKGKL-DDGREIAVKKLSHSSNQGKKEFEN-EAKLLARVQHRNVVNLLGYC 115
+G G FG V++ KL D G +A+KK+ K F+N E +++ ++ H N+V L +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 116 AHGAEKL------LIYEYVINESLDKV-------------------LFSLIKDIQIL--F 148
EK L+ +YV E++ +V ++ L + + + F
Sbjct: 83 YSSGEKKDEVYLNLVLDYV-PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 149 RKKKTDIKASNILLD-DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH- 206
DIK N+LLD D + K+ DFG A+ + +V+ + Y APE +
Sbjct: 142 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRAPELIFGATD 199
Query: 207 LSVKADVFSFGVVILELISGQ 227
+ DV+S G V+ EL+ GQ
Sbjct: 200 YTSSIDVWSAGCVLAELLLGQ 220
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 39/201 (19%)
Query: 58 LGEGGFGPVFKGKL-DDGREIAVKKLSHSSNQGKKEFEN-EAKLLARVQHRNVVNLLGYC 115
+G G FG V++ KL D G +A+KK+ K F+N E +++ ++ H N+V L +
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 86
Query: 116 AHGAEKL------LIYEYVINESLDKV-------------------LFSLIKDIQIL--F 148
EK L+ +YV E++ +V ++ L + + + F
Sbjct: 87 YSSGEKKDEVYLNLVLDYV-PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 145
Query: 149 RKKKTDIKASNILLD-DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH- 206
DIK N+LLD D + K+ DFG A+ + +V+ + Y APE +
Sbjct: 146 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRAPELIFGATD 203
Query: 207 LSVKADVFSFGVVILELISGQ 227
+ DV+S G V+ EL+ GQ
Sbjct: 204 YTSSIDVWSAGCVLAELLLGQ 224
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 36/206 (17%)
Query: 51 NFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLSHSS---NQGKKEFENEAKLLARVQHR 106
+F +G GGFG V+ K D G+ A+K L QG+ NE +L+ V
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 249
Query: 107 NV--VNLLGYCAHGAEKL---------------LIYEYVINES-----LDKVLFSL--IK 142
+ + + Y H +KL L V +E+ +++ L +
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 309
Query: 143 DIQILFRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYV 202
+ +++R D+K +NILLD+ +I+D G+A F + + H + GT+GYMAPE +
Sbjct: 310 NRFVVYR----DLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVL 362
Query: 203 MHG-HLSVKADVFSFGVVILELISGQ 227
G AD FS G ++ +L+ G
Sbjct: 363 QKGVAYDSSADWFSLGCMLFKLLRGH 388
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 36/206 (17%)
Query: 51 NFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLSHSS---NQGKKEFENEAKLLARVQHR 106
+F +G GGFG V+ K D G+ A+K L QG+ NE +L+ V
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 249
Query: 107 NV--VNLLGYCAHGAEKL---------------LIYEYVINES-----LDKVLFSL--IK 142
+ + + Y H +KL L V +E+ +++ L +
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 309
Query: 143 DIQILFRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYV 202
+ +++R D+K +NILLD+ +I+D G+A F + + H + GT+GYMAPE +
Sbjct: 310 NRFVVYR----DLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVL 362
Query: 203 MHG-HLSVKADVFSFGVVILELISGQ 227
G AD FS G ++ +L+ G
Sbjct: 363 QKGVAYDSSADWFSLGCMLFKLLRGH 388
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 39/201 (19%)
Query: 58 LGEGGFGPVFKGKL-DDGREIAVKKLSHSSNQGKKEFEN-EAKLLARVQHRNVVNLLGYC 115
+G G FG V++ KL D G +A+KK+ K F+N E +++ ++ H N+V L +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 116 AHGAEKL------LIYEYVINESLDKV-------------------LFSLIKDIQIL--F 148
EK L+ +YV E++ +V ++ L + + + F
Sbjct: 83 YSSGEKKDEVYLNLVLDYV-PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 149 RKKKTDIKASNILLD-DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH- 206
DIK N+LLD D + K+ DFG A+ + +V+ + Y APE +
Sbjct: 142 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYYRAPELIFGATD 199
Query: 207 LSVKADVFSFGVVILELISGQ 227
+ DV+S G V+ EL+ GQ
Sbjct: 200 YTSSIDVWSAGCVLAELLLGQ 220
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 90/206 (43%), Gaps = 36/206 (17%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLD--DGREIAVKKLSH--SSNQGKKEFENEAKLLARVQH 105
K + +G G +G V +D G ++A+KKLS S K E LL +QH
Sbjct: 24 KTYVSPTHVGSGAYGSVCSA-IDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQH 82
Query: 106 RNVVNLLGYCAHGAEKLLIYEYVI------------------NESLDKVLFSLIKDIQIL 147
NV+ LL + Y++ + E + +++ ++K ++ +
Sbjct: 83 ENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYI 142
Query: 148 FRKKKT--DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAG---TNGYMAPEYV 202
D+K N+ +++ KI DFG+AR H + + G T Y APE +
Sbjct: 143 HSAGVVHRDLKPGNLAVNEDCELKILDFGLAR-------HADAEMTGYVVTRWYRAPEVI 195
Query: 203 MHG-HLSVKADVFSFGVVILELISGQ 227
+ H + D++S G ++ E+++G+
Sbjct: 196 LSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 36/206 (17%)
Query: 51 NFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLSHSS---NQGKKEFENEAKLLARVQHR 106
+F +G GGFG V+ K D G+ A+K L QG+ NE +L+ V
Sbjct: 189 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 248
Query: 107 NV--VNLLGYCAHGAEKL---------------LIYEYVINES-----LDKVLFSL--IK 142
+ + + Y H +KL L V +E+ +++ L +
Sbjct: 249 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 308
Query: 143 DIQILFRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYV 202
+ +++R D+K +NILLD+ +I+D G+A F + + H + GT+GYMAPE +
Sbjct: 309 NRFVVYR----DLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVL 361
Query: 203 MHG-HLSVKADVFSFGVVILELISGQ 227
G AD FS G ++ +L+ G
Sbjct: 362 QKGVAYDSSADWFSLGCMLFKLLRGH 387
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 90/206 (43%), Gaps = 36/206 (17%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLD--DGREIAVKKLSH--SSNQGKKEFENEAKLLARVQH 105
K + +G G +G V +D G ++A+KKLS S K E LL +QH
Sbjct: 42 KTYVSPTHVGSGAYGSVCSA-IDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQH 100
Query: 106 RNVVNLLGYCAHGAEKLLIYEYVI------------------NESLDKVLFSLIKDIQIL 147
NV+ LL + Y++ + E + +++ ++K ++ +
Sbjct: 101 ENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYI 160
Query: 148 FRKKKT--DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAG---TNGYMAPEYV 202
D+K N+ +++ KI DFG+AR H + + G T Y APE +
Sbjct: 161 HSAGVVHRDLKPGNLAVNEDCELKILDFGLAR-------HADAEMTGYVVTRWYRAPEVI 213
Query: 203 MHG-HLSVKADVFSFGVVILELISGQ 227
+ H + D++S G ++ E+++G+
Sbjct: 214 LSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 36/206 (17%)
Query: 51 NFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLSHSS---NQGKKEFENEAKLLARVQHR 106
+F +G GGFG V+ K D G+ A+K L QG+ NE +L+ V
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 249
Query: 107 NV--VNLLGYCAHGAEKL---------------LIYEYVINES-----LDKVLFSL--IK 142
+ + + Y H +KL L V +E+ +++ L +
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 309
Query: 143 DIQILFRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYV 202
+ +++R D+K +NILLD+ +I+D G+A F + + H + GT+GYMAPE +
Sbjct: 310 NRFVVYR----DLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVL 362
Query: 203 MHG-HLSVKADVFSFGVVILELISGQ 227
G AD FS G ++ +L+ G
Sbjct: 363 QKGVAYDSSADWFSLGCMLFKLLRGH 388
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 25/195 (12%)
Query: 58 LGEGGFGPVFKGKLDDGR-EIAVKKLSHSSNQGK-KEFENEAKLLARVQHRNVVNLLGYC 115
+GEG +G V + + +A+KK+S +Q + E K+L +H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 116 AHGAEKLLIYEYVINESLDKVLFSLIKD------------IQILFRKKKT--------DI 155
+ + Y++ + ++ L+ L+K QIL K D+
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 152
Query: 156 KASNILLDDKWIPKIADFGMARLFPEDQTHVN--TRVAGTNGYMAPEYVMHGHLSVKA-D 212
K SN+LL+ KI DFG+AR+ D H T T Y APE +++ K+ D
Sbjct: 153 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 212
Query: 213 VFSFGVVILELISGQ 227
++S G ++ E++S +
Sbjct: 213 IWSVGCILAEMLSNR 227
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 84/204 (41%), Gaps = 22/204 (10%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKK---LSHSSNQGKKEFENEAKLLARVQHRNVVNLLG 113
K+GEG +G VFK K + EI K L E LL ++H+N+V L
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 114 YCAHGAEKLLIYEYV----------INESLD-----KVLFSLIKDIQILFRKK--KTDIK 156
+ L++E+ N LD LF L+K + + D+K
Sbjct: 69 VLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLK 128
Query: 157 ASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHL-SVKADVFS 215
N+L++ K+ADFG+AR F + V T Y P+ + L S D++S
Sbjct: 129 PQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGAKLYSTSIDMWS 187
Query: 216 FGVVILELISGQRNSSFNLDVDAQ 239
G + EL + R DVD Q
Sbjct: 188 AGCIFAELANAARPLFPGNDVDDQ 211
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 91/197 (46%), Gaps = 26/197 (13%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQG-----KKEFENEAKLLARVQHRNVVNL 111
+LG G FG V KG + + + N+ K E EA ++ ++ + +V +
Sbjct: 32 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 91
Query: 112 LGYCAHGAEKLLIYEYV----INESL-------DKVLFSLIKDIQILFRKKKT------D 154
+G C +L+ E +N+ L DK + L+ + + + + D
Sbjct: 92 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 150
Query: 155 IKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN--GYMAPEYVMHGHLSVKAD 212
+ A N+LL + KI+DFG+++ D+ + + G + APE + + S K+D
Sbjct: 151 LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSD 210
Query: 213 VFSFGVVILELIS-GQR 228
V+SFGV++ E S GQ+
Sbjct: 211 VWSFGVLMWEAFSYGQK 227
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 91/197 (46%), Gaps = 26/197 (13%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQG-----KKEFENEAKLLARVQHRNVVNL 111
+LG G FG V KG + + + N+ K E EA ++ ++ + +V +
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 112 LGYCAHGAEKLLIYEYV----INESL-------DKVLFSLIKDIQILFRKKKT------D 154
+G C +L+ E +N+ L DK + L+ + + + + D
Sbjct: 94 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 152
Query: 155 IKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN--GYMAPEYVMHGHLSVKAD 212
+ A N+LL + KI+DFG+++ D+ + + G + APE + + S K+D
Sbjct: 153 LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSD 212
Query: 213 VFSFGVVILELIS-GQR 228
V+SFGV++ E S GQ+
Sbjct: 213 VWSFGVLMWEAFSYGQK 229
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 91/197 (46%), Gaps = 26/197 (13%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQG-----KKEFENEAKLLARVQHRNVVNL 111
+LG G FG V KG + + + N+ K E EA ++ ++ + +V +
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 112 LGYCAHGAEKLLIYEYV----INESL-------DKVLFSLIKDIQILFRKKKT------D 154
+G C +L+ E +N+ L DK + L+ + + + + D
Sbjct: 94 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 152
Query: 155 IKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN--GYMAPEYVMHGHLSVKAD 212
+ A N+LL + KI+DFG+++ D+ + + G + APE + + S K+D
Sbjct: 153 LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSD 212
Query: 213 VFSFGVVILELIS-GQR 228
V+SFGV++ E S GQ+
Sbjct: 213 VWSFGVLMWEAFSYGQK 229
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 91/197 (46%), Gaps = 26/197 (13%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQG-----KKEFENEAKLLARVQHRNVVNL 111
+LG G FG V KG + + + N+ K E EA ++ ++ + +V +
Sbjct: 377 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 436
Query: 112 LGYCAHGAEKLLIYEYV----INESL-------DKVLFSLIKDIQILFRKKKT------D 154
+G C +L+ E +N+ L DK + L+ + + + + D
Sbjct: 437 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 495
Query: 155 IKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN--GYMAPEYVMHGHLSVKAD 212
+ A N+LL + KI+DFG+++ D+ + + G + APE + + S K+D
Sbjct: 496 LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSD 555
Query: 213 VFSFGVVILELIS-GQR 228
V+SFGV++ E S GQ+
Sbjct: 556 VWSFGVLMWEAFSYGQK 572
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 91/197 (46%), Gaps = 26/197 (13%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQG-----KKEFENEAKLLARVQHRNVVNL 111
+LG G FG V KG + + + N+ K E EA ++ ++ + +V +
Sbjct: 376 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 435
Query: 112 LGYCAHGAEKLLIYEYV----INESL-------DKVLFSLIKDIQILFRKKKT------D 154
+G C +L+ E +N+ L DK + L+ + + + + D
Sbjct: 436 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 494
Query: 155 IKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN--GYMAPEYVMHGHLSVKAD 212
+ A N+LL + KI+DFG+++ D+ + + G + APE + + S K+D
Sbjct: 495 LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSD 554
Query: 213 VFSFGVVILELIS-GQR 228
V+SFGV++ E S GQ+
Sbjct: 555 VWSFGVLMWEAFSYGQK 571
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 91/197 (46%), Gaps = 26/197 (13%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQG-----KKEFENEAKLLARVQHRNVVNL 111
+LG G FG V KG + + + N+ K E EA ++ ++ + +V +
Sbjct: 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 83
Query: 112 LGYCAHGAEKLLIYEYV----INESL-------DKVLFSLIKDIQILFRKKKT------D 154
+G C +L+ E +N+ L DK + L+ + + + + D
Sbjct: 84 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 142
Query: 155 IKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN--GYMAPEYVMHGHLSVKAD 212
+ A N+LL + KI+DFG+++ D+ + + G + APE + + S K+D
Sbjct: 143 LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSD 202
Query: 213 VFSFGVVILELIS-GQR 228
V+SFGV++ E S GQ+
Sbjct: 203 VWSFGVLMWEAFSYGQK 219
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 91/197 (46%), Gaps = 26/197 (13%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQG-----KKEFENEAKLLARVQHRNVVNL 111
+LG G FG V KG + + + N+ K E EA ++ ++ + +V +
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 112 LGYCAHGAEKLLIYEYV----INESL-------DKVLFSLIKDIQILFRKKKT------D 154
+G C +L+ E +N+ L DK + L+ + + + + D
Sbjct: 78 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 136
Query: 155 IKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN--GYMAPEYVMHGHLSVKAD 212
+ A N+LL + KI+DFG+++ D+ + + G + APE + + S K+D
Sbjct: 137 LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSD 196
Query: 213 VFSFGVVILELIS-GQR 228
V+SFGV++ E S GQ+
Sbjct: 197 VWSFGVLMWEAFSYGQK 213
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 25/178 (14%)
Query: 126 EYVINESLDKVLFSLIKDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQ 183
E + E L F + + ++ L +K D+ A NILL + + KI DFG+AR ++
Sbjct: 194 EPITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNP 253
Query: 184 THV---NTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVVILELIS--GQRNSSFNLDVDA 238
+V +TR+ +MAPE + S K+DV+S+GV++ E+ S G +D D
Sbjct: 254 DYVRKGDTRLPLK--WMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDF 311
Query: 239 QNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
+ L ++ ++ E P + QI L C DP+ RP +V
Sbjct: 312 CSRLREGMRM----RAPEYSTPEI------------YQIMLDCWHRDPKERPRFAELV 353
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 49/114 (42%), Gaps = 15/114 (13%)
Query: 58 LGEGGFGPVFKG------KLDDGREIAVKKLSHSSNQGK-KEFENEAKLLARV-QHRNVV 109
LG G FG V + K R +AVK L + + K E K+L + H NVV
Sbjct: 35 LGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHHLNVV 94
Query: 110 NLLGYCA-HGAEKLLIYEYVINESLDKV------LFSLIKDIQILFRKKKTDIK 156
NLLG C G ++I EY +L LF L KD + KK ++
Sbjct: 95 NLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDLFFLNKDAALHMEPKKEKME 148
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 91/197 (46%), Gaps = 26/197 (13%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQG-----KKEFENEAKLLARVQHRNVVNL 111
+LG G FG V KG + + + N+ K E EA ++ ++ + +V +
Sbjct: 12 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 71
Query: 112 LGYCAHGAEKLLIYEYV----INESL-------DKVLFSLIKDIQILFRKKKT------D 154
+G C +L+ E +N+ L DK + L+ + + + + D
Sbjct: 72 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 130
Query: 155 IKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN--GYMAPEYVMHGHLSVKAD 212
+ A N+LL + KI+DFG+++ D+ + + G + APE + + S K+D
Sbjct: 131 LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSD 190
Query: 213 VFSFGVVILELIS-GQR 228
V+SFGV++ E S GQ+
Sbjct: 191 VWSFGVLMWEAFSYGQK 207
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 91/197 (46%), Gaps = 26/197 (13%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQG-----KKEFENEAKLLARVQHRNVVNL 111
+LG G FG V KG + + + N+ K E EA ++ ++ + +V +
Sbjct: 14 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 73
Query: 112 LGYCAHGAEKLLIYEYV----INESL-------DKVLFSLIKDIQILFRKKKT------D 154
+G C +L+ E +N+ L DK + L+ + + + + D
Sbjct: 74 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 132
Query: 155 IKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN--GYMAPEYVMHGHLSVKAD 212
+ A N+LL + KI+DFG+++ D+ + + G + APE + + S K+D
Sbjct: 133 LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSD 192
Query: 213 VFSFGVVILELIS-GQR 228
V+SFGV++ E S GQ+
Sbjct: 193 VWSFGVLMWEAFSYGQK 209
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 25/195 (12%)
Query: 58 LGEGGFGPVFKGKLDDGR-EIAVKKLSHSSNQGK-KEFENEAKLLARVQHRNVVNLLGYC 115
+GEG +G V + + +A+KK+S +Q + E K+L +H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 116 AHGAEKLLIYEYVINESLDKVLFSLIKD------------IQILFRKKKT--------DI 155
+ + Y++ + ++ L+ L+K QIL K D+
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 152
Query: 156 KASNILLDDKWIPKIADFGMARLFPEDQTHVN--TRVAGTNGYMAPEYVMHGHLSVKA-D 212
K SN+LL+ KI DFG+AR+ D H T T Y APE +++ K+ D
Sbjct: 153 KPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 212
Query: 213 VFSFGVVILELISGQ 227
++S G ++ E++S +
Sbjct: 213 IWSVGCILAEMLSNR 227
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 97/226 (42%), Gaps = 51/226 (22%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLD--DGR----EIAVKKLSHSSNQGK-KEFENEAKLLAR 102
KN LGEG FG V K GR +AVK L +++ + ++ +E +L +
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 103 VQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVL------------------------- 137
V H +V+ L G C+ LLI EY SL L
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 138 --------------FSLIKDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPE 181
+ + + +Q L K D+ A NIL+ + KI+DFG++R E
Sbjct: 143 DERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYE 202
Query: 182 DQTHVNTRVAGT--NGYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
+ ++V R G +MA E + + ++DV+SFGV++ E+++
Sbjct: 203 EDSYVK-RSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 97/199 (48%), Gaps = 37/199 (18%)
Query: 58 LGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQHRNVVNLLG 113
+G G +G V + G +IAVKKLS S K+ + E +LL ++H NV+ LL
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 117
Query: 114 ---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQILFRKK--K 152
H GA+ ++ + + ++ + +++ +++ ++ +
Sbjct: 118 VFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 177
Query: 153 TDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAG---TNGYMAPEYVMHG-HLS 208
D+K SN+ +++ KI DFG+AR H + + G T Y APE +++ H +
Sbjct: 178 RDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEIMLNWMHYN 230
Query: 209 VKADVFSFGVVILELISGQ 227
+ D++S G ++ EL++G+
Sbjct: 231 MTVDIWSVGCIMAELLTGR 249
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 88/199 (44%), Gaps = 24/199 (12%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLD-DGREIAVKKLSHSSNQGKKE-FENEAKLLARVQHRN 107
K F LG G F V + G+ AVK + + +GK+ ENE +L +++H N
Sbjct: 22 KIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHEN 81
Query: 108 VVNLLGYCAHGAEKLLIYEYVIN-ESLDKVL---FSLIKDIQILFRKK------------ 151
+V L L+ + V E D+++ F KD L R+
Sbjct: 82 IVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGI 141
Query: 152 -KTDIKASNILL---DDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHL 207
D+K N+L D++ I+DFG++++ E + V + GT GY+APE +
Sbjct: 142 VHRDLKPENLLYYSQDEESKIMISDFGLSKM--EGKGDVMSTACGTPGYVAPEVLAQKPY 199
Query: 208 SVKADVFSFGVVILELISG 226
S D +S GV+ L+ G
Sbjct: 200 SKAVDCWSIGVIAYILLCG 218
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 96/225 (42%), Gaps = 49/225 (21%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLD--DGR----EIAVKKLSHSSNQGK-KEFENEAKLLAR 102
KN LGEG FG V K GR +AVK L +++ + ++ +E +L +
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 103 VQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVL------------------------- 137
V H +V+ L G C+ LLI EY SL L
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 138 --------------FSLIKDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMAR-LFP 180
+ + + +Q L K D+ A NIL+ + KI+DFG++R ++
Sbjct: 143 DERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYE 202
Query: 181 EDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
ED ++ +MA E + + ++DV+SFGV++ E+++
Sbjct: 203 EDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 85/197 (43%), Gaps = 27/197 (13%)
Query: 58 LGEGGFGPVFKGK-LDDGREIAVKKLSHSSNQGKK---EFENEAKLLARVQHRNVVNLL- 112
LG GG V + L D R++AVK L + F EA+ A + H +V +
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 113 ---GYCAHGAEKLLIYEYVINESLDKVLFS-----------LIKD-IQILFRKKKT---- 153
G ++ EYV +L ++ + +I D Q L +
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIH 139
Query: 154 -DIKASNILLDDKWIPKIADFGMARLFPEDQTHV--NTRVAGTNGYMAPEYVMHGHLSVK 210
D+K +NIL+ K+ DFG+AR + V V GT Y++PE + +
Sbjct: 140 RDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDAR 199
Query: 211 ADVFSFGVVILELISGQ 227
+DV+S G V+ E+++G+
Sbjct: 200 SDVYSLGCVLYEVLTGE 216
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 94/195 (48%), Gaps = 27/195 (13%)
Query: 56 NKLGEGGFGPVFKGK--LDDGREIAVKKLSHSSNQGKKEFE-NEAKLLARVQHRNVVNLL 112
+KLGEG + V+KGK L D +A+K++ +G E LL ++H N+V L
Sbjct: 8 DKLGEGTYATVYKGKSKLTDNL-VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLH 66
Query: 113 GYCAHGAEKLLIYEYV---INESLDKV------------LFSLIKDIQILFRKK--KTDI 155
L++EY+ + + LD LF L++ + R+K D+
Sbjct: 67 DIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDL 126
Query: 156 KASNILLDDKWIPKIADFGMARL--FPEDQTHVNTRVAGTNGYMAPEYVM-HGHLSVKAD 212
K N+L++++ K+ADFG+AR P +T+ N V T Y P+ ++ S + D
Sbjct: 127 KPQNLLINERGELKLADFGLARAKSIP-TKTYDNEVV--TLWYRPPDILLGSTDYSTQID 183
Query: 213 VFSFGVVILELISGQ 227
++ G + E+ +G+
Sbjct: 184 MWGVGCIFYEMATGR 198
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 93/200 (46%), Gaps = 32/200 (16%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQG-----KKEFENEAKLLARVQHRNVVNL 111
+LG G FG V KG + + + N+ K E EA ++ ++ + +V +
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 112 LGYCAHGAEKLLIYEYV----INESL-------DKVLFSLIKDIQILFRKKKT------D 154
+G C +L+ E +N+ L DK + L+ + + + + D
Sbjct: 78 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 136
Query: 155 IKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNG-----YMAPEYVMHGHLSV 209
+ A N+LL + KI+DFG+++ D+ N A T+G + APE + + S
Sbjct: 137 LAARNVLLVTQHYAKISDFGLSKALRADE---NXYKAQTHGKWPVKWYAPECINYYKFSS 193
Query: 210 KADVFSFGVVILELIS-GQR 228
K+DV+SFGV++ E S GQ+
Sbjct: 194 KSDVWSFGVLMWEAFSYGQK 213
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 98/219 (44%), Gaps = 40/219 (18%)
Query: 50 KNFHPSNKLGEGGFGPVFKGK----LDDGREIAVKKLSHSS-NQGKKEFEN---EAKLLA 101
+NF LG G +G VF + D G+ A+K L ++ Q K E+ E ++L
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 102 RVQHRNVVNLLGYCAHGAEKL-LIYEYV-------------------INESLDKVLFSL- 140
++ + L Y KL LI +Y+ + + +++ +L
Sbjct: 114 HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALE 173
Query: 141 -IKDIQILFRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAP 199
+ + I++R DIK NILLD + DFG+++ F D+T GT YMAP
Sbjct: 174 HLHKLGIIYR----DIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAP 229
Query: 200 EYVM---HGHLSVKADVFSFGVVILELISGQRNSSFNLD 235
+ V GH D +S GV++ EL++G S F +D
Sbjct: 230 DIVRGGDSGH-DKAVDWWSLGVLMYELLTGA--SPFTVD 265
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 87/200 (43%), Gaps = 24/200 (12%)
Query: 50 KNFHPSNKLGEGGFGPVFKGK-LDDGREIAVKKLS--HSSNQGKKEF-ENEAKLLARVQH 105
++F LGEG F V + L RE A+K L H + K + E +++R+ H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 106 RNVVNLLGYCAHGAEKLLI-YEYVINESLDKVL---------------FSLIKDIQILFR 149
V L +C EKL Y N L K + ++ ++ L
Sbjct: 97 PFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 155
Query: 150 KK--KTDIKASNILLDDKWIPKIADFGMARLF-PEDQTHVNTRVAGTNGYMAPEYVMHGH 206
K D+K NILL++ +I DFG A++ PE + GT Y++PE +
Sbjct: 156 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 215
Query: 207 LSVKADVFSFGVVILELISG 226
+D+++ G +I +L++G
Sbjct: 216 ACKSSDLWALGCIIYQLVAG 235
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 27/197 (13%)
Query: 58 LGEGGFGPVFKGK-LDDGREIAVKKLSHSSNQGKK---EFENEAKLLARVQHRNVVNLL- 112
LG GG V + L D R++AVK L + F EA+ A + H +V +
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 113 ---GYCAHGAEKLLIYEYVINESLDKVLFS-----------LIKD-IQILFRKKKT---- 153
G ++ EYV +L ++ + +I D Q L +
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIH 139
Query: 154 -DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVA--GTNGYMAPEYVMHGHLSVK 210
D+K +NI++ K+ DFG+AR + V A GT Y++PE + +
Sbjct: 140 RDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDAR 199
Query: 211 ADVFSFGVVILELISGQ 227
+DV+S G V+ E+++G+
Sbjct: 200 SDVYSLGCVLYEVLTGE 216
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 82/198 (41%), Gaps = 24/198 (12%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFEN----EAKLLARVQH 105
++F LG+G FG V+ + + I K+ + K E+ E ++ + ++H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 106 RNVVNLLGYCAHGAEKLLIYEY----VINESLDKV-----------LFSLIKDIQILFRK 150
N++ L GY LI EY + L K+ + L + K
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSK 131
Query: 151 K--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLS 208
+ DIK N+LL KIADFG + P + T + GT Y+ PE +
Sbjct: 132 RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIEGRMHD 188
Query: 209 VKADVFSFGVVILELISG 226
K D++S GV+ E + G
Sbjct: 189 EKVDLWSLGVLCYEFLVG 206
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 78/154 (50%), Gaps = 34/154 (22%)
Query: 57 KLGEGGFGPVFKGK-LDDGREIAVKKLSHSSNQGKKEFE----NEAKLLARVQHRNVVNL 111
K+G+G FG VFK + G+++A+KK+ + K+ F E K+L ++H NVVNL
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENE--KEGFPITALREIKILQLLKHENVVNL 82
Query: 112 L---------------------GYCAHGAEKLL---IYEYVINESLDKVLFSLIKDIQIL 147
+ +C H LL + ++ ++E + +V+ L+ + +
Sbjct: 83 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE-IKRVMQMLLNGLYYI 141
Query: 148 FRKK--KTDIKASNILLDDKWIPKIADFGMARLF 179
R K D+KA+N+L+ + K+ADFG+AR F
Sbjct: 142 HRNKILHRDMKAANVLITRDGVLKLADFGLARAF 175
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 27/197 (13%)
Query: 58 LGEGGFGPVFKGK-LDDGREIAVKKLSHSSNQGKK---EFENEAKLLARVQHRNVVNLL- 112
LG GG V + L D R++AVK L + F EA+ A + H +V +
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 113 ---GYCAHGAEKLLIYEYVINESLDKVLFS-----------LIKD-IQILFRKKKT---- 153
G ++ EYV +L ++ + +I D Q L +
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIH 139
Query: 154 -DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVA--GTNGYMAPEYVMHGHLSVK 210
D+K +NI++ K+ DFG+AR + V A GT Y++PE + +
Sbjct: 140 RDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDAR 199
Query: 211 ADVFSFGVVILELISGQ 227
+DV+S G V+ E+++G+
Sbjct: 200 SDVYSLGCVLYEVLTGE 216
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 88/213 (41%), Gaps = 28/213 (13%)
Query: 41 PFEALVS--ATKNFHPSNKLGEGGFGPVFKGKLD--DGR--EIAVKKLSH---SSNQGKK 91
P ++L K+ KLG+G FG V +G+ D G+ +AVK L S +
Sbjct: 7 PLQSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD 66
Query: 92 EFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKV-------LFSLIKDI 144
+F E + + HRN++ L G K++ + LD++ L +
Sbjct: 67 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRY 126
Query: 145 QILF----------RKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTH--VNTRVAG 192
+ R D+ A N+LL + + KI DFG+ R P++ H +
Sbjct: 127 AVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV 186
Query: 193 TNGYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
+ APE + S +D + FGV + E+ +
Sbjct: 187 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 26/199 (13%)
Query: 50 KNFHPSNKLGEGGFGPVF--KGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRN 107
K F LG G F VF K +L G+ A+K + S ENE +L +++H N
Sbjct: 9 KTFIFMEVLGSGAFSEVFLVKQRLT-GKLFALKCIKKSPAFRDSSLENEIAVLKKIKHEN 67
Query: 108 VVNLLGYCAHGAEKLLIYEYVIN-ESLDKVLFSLI---KDIQILFRKKKT---------- 153
+V L L+ + V E D++L + KD ++ ++ +
Sbjct: 68 IVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGI 127
Query: 154 ---DIKASNILL---DDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHL 207
D+K N+L ++ I DFG++++ +Q + + GT GY+APE +
Sbjct: 128 VHRDLKPENLLYLTPEENSKIMITDFGLSKM---EQNGIMSTACGTPGYVAPEVLAQKPY 184
Query: 208 SVKADVFSFGVVILELISG 226
S D +S GV+ L+ G
Sbjct: 185 SKAVDCWSIGVITYILLCG 203
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 126/297 (42%), Gaps = 54/297 (18%)
Query: 16 NLGSSREGDNEEDLEKIAAREQKHF--PFEALVSATKN---FHPSNKLGEGGFGPVFKGK 70
N ++++G +E +++ A+ ++ F +E T + F +G G FG V K
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVK 61
Query: 71 -LDDGREIAVKKLSHSSNQGKKEFE---NEAKLLARVQHRNVVNLLGYCAHGAEKLLIYE 126
++ G A+K L K+ E NE ++L V +V L + ++ E
Sbjct: 62 HMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 121
Query: 127 YV----INESLDKV-----------------LFSLIKDIQILFRKKKTDIKASNILLDDK 165
YV + L ++ F + + +++R D+K N+L+D +
Sbjct: 122 YVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR----DLKPENLLIDQQ 177
Query: 166 WIPKIADFGMARLFPEDQTHVNTR---VAGTNGYMAPEYVMHGHLSVKADVFSFGVVILE 222
K+ADFG A+ V R + GT Y+APE ++ + D ++ GV+I E
Sbjct: 178 GYIKVADFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 223 LISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGL 279
+ +G F D Q +Y+K S ++ PS +SD D + +Q+ L
Sbjct: 231 MAAGY--PPFFADQPIQ--------IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 88/213 (41%), Gaps = 28/213 (13%)
Query: 41 PFEALVS--ATKNFHPSNKLGEGGFGPVFKGKLD--DGR--EIAVKKLSH---SSNQGKK 91
P ++L K+ KLG+G FG V +G+ D G+ +AVK L S +
Sbjct: 7 PLQSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD 66
Query: 92 EFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKV-------LFSLIKDI 144
+F E + + HRN++ L G K++ + LD++ L +
Sbjct: 67 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRY 126
Query: 145 QILF----------RKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTH--VNTRVAG 192
+ R D+ A N+LL + + KI DFG+ R P++ H +
Sbjct: 127 AVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV 186
Query: 193 TNGYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
+ APE + S +D + FGV + E+ +
Sbjct: 187 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 89/197 (45%), Gaps = 31/197 (15%)
Query: 57 KLGEGGFGPV-FKGKLDDGREIAVKKLSHSSNQGKKE-FENEAKLLARVQHRNVVNL--- 111
KLG G FG V + G E +K ++ +Q E E E ++L + H N++ +
Sbjct: 29 KLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEV 88
Query: 112 ----------LGYCAHGA--EKLLIYEY---VINESLDKVLFSLIKDIQILFRKKKT--- 153
+ C G E+++ + ++E L + + F +
Sbjct: 89 FEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHK 148
Query: 154 DIKASNILLDDKWIP----KIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSV 209
D+K NIL D P KI DFG+A LF D+ +T AGT YMAPE V ++
Sbjct: 149 DLKPENILFQDTS-PHSPIKIIDFGLAELFKSDEH--STNAAGTALYMAPE-VFKRDVTF 204
Query: 210 KADVFSFGVVILELISG 226
K D++S GVV+ L++G
Sbjct: 205 KCDIWSAGVVMYFLLTG 221
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 25/192 (13%)
Query: 58 LGEGGFGPV-FKGKLDDGREIAVKKLSHS---SNQGKKEFENEAKLLARVQHRNVVNLLG 113
LGEG FG V +++A+K +S + E E L ++H +++ L
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 114 YCAHGAEKLLIYEYVINESLDKVL--------------FSLIKDIQILFRKKKT--DIKA 157
+ +++ EY E D ++ +I I+ R K D+K
Sbjct: 77 VITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKP 136
Query: 158 SNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSV--KADVFS 215
N+LLDD KIADFG++ + D + T G+ Y APE V++G L + DV+S
Sbjct: 137 ENLLLDDNLNVKIADFGLSNIM-TDGNFLKTS-CGSPNYAAPE-VINGKLYAGPEVDVWS 193
Query: 216 FGVVILELISGQ 227
G+V+ ++ G+
Sbjct: 194 CGIVLYVMLVGR 205
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 93/224 (41%), Gaps = 55/224 (24%)
Query: 51 NFHPSNKLGEGGFGPVFKGK-LDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVV 109
+F LG+G FG V K + D R A+KK+ H+ + +E LLA + H+ VV
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQYVV 65
Query: 110 NL--------------------------LGYCAHGAEKLLIYEYVINESLDKV--LF--- 138
+ YC +G LI+ +N+ D+ LF
Sbjct: 66 RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQI 125
Query: 139 ----SLIKDIQILFRKKKTDIKASNILLDDKWIPKIADFGMAR-------LFPEDQTHVN 187
S I I+ R D+K NI +D+ KI DFG+A+ + D ++
Sbjct: 126 LEALSYIHSQGIIHR----DLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLP 181
Query: 188 ------TRVAGTNGYMAPEYV-MHGHLSVKADVFSFGVVILELI 224
T GT Y+A E + GH + K D++S G++ E+I
Sbjct: 182 GSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 34/197 (17%)
Query: 58 LGEGGFGPVF----KGKLDDGREIAVKKLSHSSNQGKKEFEN--EAKLLARVQHRNVVNL 111
LG+G FG VF + D G A+K L ++ + + E +LA V H VV L
Sbjct: 36 LGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKL 95
Query: 112 LGYCAHGAEKL-LIYEYVINESL-----DKVLFS----------------LIKDIQILFR 149
Y KL LI +++ L +V+F+ + + I++R
Sbjct: 96 -HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSLGIIYR 154
Query: 150 KKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSV 209
D+K NILLD++ K+ DFG+++ + + + GT YMAPE V S
Sbjct: 155 ----DLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS-FCGTVEYMAPEVVNRQGHSH 209
Query: 210 KADVFSFGVVILELISG 226
AD +S+GV++ E+++G
Sbjct: 210 SADWWSYGVLMFEMLTG 226
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 84/204 (41%), Gaps = 22/204 (10%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKK---LSHSSNQGKKEFENEAKLLARVQHRNVVNLLG 113
K+GEG +G VFK K + EI K L E LL ++H+N+V L
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 114 YCAHGAEKLLIYEYV----------INESLD-----KVLFSLIKDIQILFRKK--KTDIK 156
+ L++E+ N LD LF L+K + + D+K
Sbjct: 69 VLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLK 128
Query: 157 ASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHL-SVKADVFS 215
N+L++ K+A+FG+AR F + V T Y P+ + L S D++S
Sbjct: 129 PQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGAKLYSTSIDMWS 187
Query: 216 FGVVILELISGQRNSSFNLDVDAQ 239
G + EL + R DVD Q
Sbjct: 188 AGCIFAELANAGRPLFPGNDVDDQ 211
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 30/152 (19%)
Query: 57 KLGEGGFGPVFKGK-LDDGREIAVKK-LSHSSNQG-KKEFENEAKLLARVQHRNVVNLL- 112
K+G+G FG VFK + G+++A+KK L + +G E K+L ++H NVVNL+
Sbjct: 24 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 83
Query: 113 --------------------GYCAHGAEKLL---IYEYVINESLDKVLFSLIKDIQILFR 149
+C H LL + ++ ++E + +V+ L+ + + R
Sbjct: 84 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE-IKRVMQMLLNGLYYIHR 142
Query: 150 KK--KTDIKASNILLDDKWIPKIADFGMARLF 179
K D+KA+N+L+ + K+ADFG+AR F
Sbjct: 143 NKILHRDMKAANVLITRDGVLKLADFGLARAF 174
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 98/207 (47%), Gaps = 40/207 (19%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 106 RNVVNLLG---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQI 146
NV+ LL H GA+ ++ + + ++ + +++ +++ ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 147 LFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAG---TNGYMAPEY 201
+ D+K SN+ +++ KI DFG+AR H + +AG T Y APE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVATRWYRAPEI 193
Query: 202 VMHG-HLSVKADVFSFGVVILELISGQ 227
+++ H + D++S G ++ EL++G+
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 98/207 (47%), Gaps = 40/207 (19%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 106 RNVVNLLG---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQI 146
NV+ LL H GA+ ++ + + ++ + +++ +++ ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 147 LFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAG---TNGYMAPEY 201
+ D+K SN+ +++ KI DFG+AR H + +AG T Y APE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVATRWYRAPEI 193
Query: 202 VMHG-HLSVKADVFSFGVVILELISGQ 227
+++ H + D++S G ++ EL++G+
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 78/154 (50%), Gaps = 34/154 (22%)
Query: 57 KLGEGGFGPVFKGK-LDDGREIAVKKLSHSSNQGKKEFE----NEAKLLARVQHRNVVNL 111
K+G+G FG VFK + G+++A+KK+ + K+ F E K+L ++H NVVNL
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENE--KEGFPITALREIKILQLLKHENVVNL 82
Query: 112 L---------------------GYCAHGAEKLL---IYEYVINESLDKVLFSLIKDIQIL 147
+ +C H LL + ++ ++E + +V+ L+ + +
Sbjct: 83 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE-IKRVMQMLLNGLYYI 141
Query: 148 FRKK--KTDIKASNILLDDKWIPKIADFGMARLF 179
R K D+KA+N+L+ + K+ADFG+AR F
Sbjct: 142 HRNKILHRDMKAANVLITRDGVLKLADFGLARAF 175
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 78/154 (50%), Gaps = 34/154 (22%)
Query: 57 KLGEGGFGPVFKGK-LDDGREIAVKKLSHSSNQGKKEFE----NEAKLLARVQHRNVVNL 111
K+G+G FG VFK + G+++A+KK+ + K+ F E K+L ++H NVVNL
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENE--KEGFPITALREIKILQLLKHENVVNL 82
Query: 112 L---------------------GYCAHGAEKLL---IYEYVINESLDKVLFSLIKDIQIL 147
+ +C H LL + ++ ++E + +V+ L+ + +
Sbjct: 83 IEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSE-IKRVMQMLLNGLYYI 141
Query: 148 FRKK--KTDIKASNILLDDKWIPKIADFGMARLF 179
R K D+KA+N+L+ + K+ADFG+AR F
Sbjct: 142 HRNKILHRDMKAANVLITRDGVLKLADFGLARAF 175
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 84/202 (41%), Gaps = 26/202 (12%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLD--DGR--EIAVKKLSH---SSNQGKKEFENEAKLLAR 102
K+ KLG+G FG V +G+ D G+ +AVK L S + +F E +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 103 VQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKV-------LFSLIKDIQILF------- 148
+ HRN++ L G K++ + LD++ L + +
Sbjct: 68 LDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 127
Query: 149 ---RKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTH--VNTRVAGTNGYMAPEYVM 203
R D+ A N+LL + + KI DFG+ R P++ H + + APE +
Sbjct: 128 ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 187
Query: 204 HGHLSVKADVFSFGVVILELIS 225
S +D + FGV + E+ +
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFT 209
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 84/202 (41%), Gaps = 26/202 (12%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLD--DGR--EIAVKKLSH---SSNQGKKEFENEAKLLAR 102
K+ KLG+G FG V +G+ D G+ +AVK L S + +F E +
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 71
Query: 103 VQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKV-------LFSLIKDIQILF------- 148
+ HRN++ L G K++ + LD++ L + +
Sbjct: 72 LDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 131
Query: 149 ---RKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTH--VNTRVAGTNGYMAPEYVM 203
R D+ A N+LL + + KI DFG+ R P++ H + + APE +
Sbjct: 132 ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 191
Query: 204 HGHLSVKADVFSFGVVILELIS 225
S +D + FGV + E+ +
Sbjct: 192 TRTFSHASDTWMFGVTLWEMFT 213
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 95/225 (42%), Gaps = 49/225 (21%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLD--DGR----EIAVKKLSHSSNQGK-KEFENEAKLLAR 102
KN LGEG FG V K GR +AVK L +++ + ++ +E +L +
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 103 VQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVL------------------------- 137
V H +V+ L G C+ LLI EY SL L
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 138 --------------FSLIKDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMAR-LFP 180
+ + + +Q L D+ A NIL+ + KI+DFG++R ++
Sbjct: 143 DERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYE 202
Query: 181 EDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
ED ++ +MA E + + ++DV+SFGV++ E+++
Sbjct: 203 EDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 95/199 (47%), Gaps = 37/199 (18%)
Query: 58 LGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQHRNVVNLLG 113
+G G +G V G +AVKKLS S K+ + E +LL ++H NV+ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 84
Query: 114 ---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQILFRKK--K 152
H GA+ ++ + + ++ + +++ +++ ++ +
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 144
Query: 153 TDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAG---TNGYMAPEYVMHG-HLS 208
D+K SN+ +++ KI DFG+AR H + +AG T Y APE +++ H +
Sbjct: 145 RDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVATRWYRAPEIMLNWMHYN 197
Query: 209 VKADVFSFGVVILELISGQ 227
D++S G ++ EL++G+
Sbjct: 198 QTVDIWSVGCIMAELLTGR 216
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 84/202 (41%), Gaps = 26/202 (12%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLD--DGR--EIAVKKLSH---SSNQGKKEFENEAKLLAR 102
K+ KLG+G FG V +G+ D G+ +AVK L S + +F E +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 103 VQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKV-------LFSLIKDIQILF------- 148
+ HRN++ L G K++ + LD++ L + +
Sbjct: 68 LDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 127
Query: 149 ---RKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTH--VNTRVAGTNGYMAPEYVM 203
R D+ A N+LL + + KI DFG+ R P++ H + + APE +
Sbjct: 128 ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLK 187
Query: 204 HGHLSVKADVFSFGVVILELIS 225
S +D + FGV + E+ +
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFT 209
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 84/193 (43%), Gaps = 25/193 (12%)
Query: 58 LGEGGFGPVFKGKLDDGREI-AVKKLSHSSNQGKKEFEN---EAKLLARVQHRNVVNLLG 113
LG+G FG V E+ A+K L + E E ++LA + + L
Sbjct: 27 LGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLH 86
Query: 114 YCAHGAEKL-LIYEYVINESL-------------DKVLFSLIKDIQILFRKKK----TDI 155
C ++L + EYV L V ++ I + F K+ D+
Sbjct: 87 SCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDL 146
Query: 156 KASNILLDDKWIPKIADFGMARLFPEDQTHVNTR-VAGTNGYMAPEYVMHGHLSVKADVF 214
K N++LD + KIADFGM + D V TR GT Y+APE + + D +
Sbjct: 147 KLDNVMLDSEGHIKIADFGMCKEHMMDG--VTTREFCGTPDYIAPEIIAYQPYGKSVDWW 204
Query: 215 SFGVVILELISGQ 227
++GV++ E+++GQ
Sbjct: 205 AYGVLLYEMLAGQ 217
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 84/202 (41%), Gaps = 26/202 (12%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLD--DGR--EIAVKKLSH---SSNQGKKEFENEAKLLAR 102
K+ KLG+G FG V +G+ D G+ +AVK L S + +F E +
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 71
Query: 103 VQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKV-------LFSLIKDIQILF------- 148
+ HRN++ L G K++ + LD++ L + +
Sbjct: 72 LDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 131
Query: 149 ---RKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTH--VNTRVAGTNGYMAPEYVM 203
R D+ A N+LL + + KI DFG+ R P++ H + + APE +
Sbjct: 132 ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 191
Query: 204 HGHLSVKADVFSFGVVILELIS 225
S +D + FGV + E+ +
Sbjct: 192 TRTFSHASDTWMFGVTLWEMFT 213
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 84/202 (41%), Gaps = 26/202 (12%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLD--DGR--EIAVKKLSH---SSNQGKKEFENEAKLLAR 102
K+ KLG+G FG V +G+ D G+ +AVK L S + +F E +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 103 VQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKV-------LFSLIKDIQILF------- 148
+ HRN++ L G K++ + LD++ L + +
Sbjct: 68 LDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 127
Query: 149 ---RKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTH--VNTRVAGTNGYMAPEYVM 203
R D+ A N+LL + + KI DFG+ R P++ H + + APE +
Sbjct: 128 ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 187
Query: 204 HGHLSVKADVFSFGVVILELIS 225
S +D + FGV + E+ +
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFT 209
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 102/260 (39%), Gaps = 39/260 (15%)
Query: 58 LGEGGFGPVFKGKLDDGREIAVKKLSHSS----NQGKKEFENEAKLLARVQHRNVVNLLG 113
LG+GGF F+ D +E+ K+ S +++ E + + H++VV G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 114 YCAHGAEKLLIYEYVINESLDKV---------------LFSLIKDIQILFRKK--KTDIK 156
+ ++ E SL ++ L ++ Q L R + D+K
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 148
Query: 157 ASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSF 216
N+ L++ KI DFG+A D T + GT Y+APE + S + DV+S
Sbjct: 149 LGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHSFEVDVWSI 207
Query: 217 GVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQ 276
G ++ L+ G+ F + L Y K + V SL IQ
Sbjct: 208 GCIMYTLLVGK--PPFETSCLKETYLRIKKNEYSIPKHINPVAASL------------IQ 253
Query: 277 IGLLCTQGDPQLRPTMRRVV 296
L Q DP RPT+ ++
Sbjct: 254 KML---QTDPTARPTINELL 270
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 102/260 (39%), Gaps = 39/260 (15%)
Query: 58 LGEGGFGPVFKGKLDDGREIAVKKLSHSS----NQGKKEFENEAKLLARVQHRNVVNLLG 113
LG+GGF F+ D +E+ K+ S +++ E + + H++VV G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 114 YCAHGAEKLLIYEYVINESLDKV---------------LFSLIKDIQILFRKK--KTDIK 156
+ ++ E SL ++ L ++ Q L R + D+K
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 144
Query: 157 ASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSF 216
N+ L++ KI DFG+A D T + GT Y+APE + S + DV+S
Sbjct: 145 LGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHSFEVDVWSI 203
Query: 217 GVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQ 276
G ++ L+ G+ F + L Y K + V SL IQ
Sbjct: 204 GCIMYTLLVGK--PPFETSCLKETYLRIKKNEYSIPKHINPVAASL------------IQ 249
Query: 277 IGLLCTQGDPQLRPTMRRVV 296
L Q DP RPT+ ++
Sbjct: 250 KML---QTDPTARPTINELL 266
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 126/297 (42%), Gaps = 54/297 (18%)
Query: 16 NLGSSREGDNEEDLEKIAAREQKHF--PFEALVSATKN---FHPSNKLGEGGFGPVFKGK 70
N ++++G +E +++ A+ ++ F +E T + F +G G FG V K
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVK 61
Query: 71 -LDDGREIAVKKLSHSSNQGKKEFE---NEAKLLARVQHRNVVNLLGYCAHGAEKLLIYE 126
++ G A+K L K+ E NE ++L V +V L + ++ E
Sbjct: 62 HMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 121
Query: 127 YV----INESLDKV-----------------LFSLIKDIQILFRKKKTDIKASNILLDDK 165
Y+ + L ++ F + + +++R D+K N+L+D +
Sbjct: 122 YMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR----DLKPENLLIDQQ 177
Query: 166 WIPKIADFGMARLFPEDQTHVNTR---VAGTNGYMAPEYVMHGHLSVKADVFSFGVVILE 222
K+ADFG A+ V R + GT Y+APE ++ + D ++ GV+I E
Sbjct: 178 GYIKVADFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 223 LISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGL 279
+ +G F D Q +Y+K S ++ PS +SD D + +Q+ L
Sbjct: 231 MAAGY--PPFFADQPIQ--------IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 125/297 (42%), Gaps = 54/297 (18%)
Query: 16 NLGSSREGDNEEDLEKIAAREQKHF--PFEALVSATKN---FHPSNKLGEGGFGPVFKGK 70
N ++++G +E +++ A+ ++ F +E T + F LG G FG V K
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVK 61
Query: 71 -LDDGREIAVKKLSHSSNQGKKEFE---NEAKLLARVQHRNVVNLLGYCAHGAEKLLIYE 126
++ G A+K L KE E NE ++L V +V L + ++ E
Sbjct: 62 HMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 121
Query: 127 YV----INESLDKV-----------------LFSLIKDIQILFRKKKTDIKASNILLDDK 165
Y + L ++ F + + +++R D+K N+++D +
Sbjct: 122 YAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR----DLKPENLMIDQQ 177
Query: 166 WIPKIADFGMARLFPEDQTHVNTR---VAGTNGYMAPEYVMHGHLSVKADVFSFGVVILE 222
K+ DFG+A+ V R + GT Y+APE ++ + D ++ GV+I E
Sbjct: 178 GYIKVTDFGLAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 223 LISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGL 279
+ +G F D Q +Y+K S ++ PS +SD D + +Q+ L
Sbjct: 231 MAAGY--PPFFADQPIQ--------IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 89/195 (45%), Gaps = 26/195 (13%)
Query: 58 LGEGGFGPVFKGKLDDGREI-AVKKLSHSSNQGKKEFEN---EAKLLARVQHRNVVNLLG 113
+G+G FG V + +D +++ A+K ++ + E N E +++ ++H +VNL
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWY 82
Query: 114 YCAHGAEKLLIYEYVI---------------NESLDKVLFSLIKDIQILFRKK--KTDIK 156
+ ++ + ++ E++ + L+ + L ++ D+K
Sbjct: 83 SFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMK 142
Query: 157 ASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMH---GHLSVKADV 213
NILLD+ I DF +A + P +T + T +AGT YMAPE S D
Sbjct: 143 PDNILLDEHGHVHITDFNIAAMLPR-ETQITT-MAGTKPYMAPEMFSSRKGAGYSFAVDW 200
Query: 214 FSFGVVILELISGQR 228
+S GV EL+ G+R
Sbjct: 201 WSLGVTAYELLRGRR 215
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 102/260 (39%), Gaps = 39/260 (15%)
Query: 58 LGEGGFGPVFKGKLDDGREIAVKKLSHSS----NQGKKEFENEAKLLARVQHRNVVNLLG 113
LG+GGF F+ D +E+ K+ S +++ E + + H++VV G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 114 YCAHGAEKLLIYEYVINESLDKV---------------LFSLIKDIQILFRKK--KTDIK 156
+ ++ E SL ++ L ++ Q L R + D+K
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 144
Query: 157 ASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSF 216
N+ L++ KI DFG+A D T + GT Y+APE + S + DV+S
Sbjct: 145 LGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHSFEVDVWSI 203
Query: 217 GVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQ 276
G ++ L+ G+ F + L Y K + V SL IQ
Sbjct: 204 GCIMYTLLVGK--PPFETSCLKETYLRIKKNEYSIPKHINPVAASL------------IQ 249
Query: 277 IGLLCTQGDPQLRPTMRRVV 296
L Q DP RPT+ ++
Sbjct: 250 KML---QTDPTARPTINELL 266
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 126/297 (42%), Gaps = 54/297 (18%)
Query: 16 NLGSSREGDNEEDLEKIAAREQKHF--PFEALVSATKN---FHPSNKLGEGGFGPVFKGK 70
N ++++G +E +++ A+ ++ F +E T + F +G G FG V K
Sbjct: 2 NAAAAKKGXEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVK 61
Query: 71 -LDDGREIAVKKLSHSSNQGKKEFE---NEAKLLARVQHRNVVNLLGYCAHGAEKLLIYE 126
++ G A+K L K+ E NE ++L V +V L + ++ E
Sbjct: 62 HMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 121
Query: 127 YV----INESLDKV-----------------LFSLIKDIQILFRKKKTDIKASNILLDDK 165
Y+ + L ++ F + + +++R D+K N+L+D +
Sbjct: 122 YMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR----DLKPENLLIDQQ 177
Query: 166 WIPKIADFGMARLFPEDQTHVNTR---VAGTNGYMAPEYVMHGHLSVKADVFSFGVVILE 222
K+ADFG A+ V R + GT Y+APE ++ + D ++ GV+I E
Sbjct: 178 GYIKVADFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 223 LISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGL 279
+ +G F D Q +Y+K S ++ PS +SD D + +Q+ L
Sbjct: 231 MAAGY--PPFFADQPIQ--------IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 123/297 (41%), Gaps = 54/297 (18%)
Query: 16 NLGSSREGDNEEDLEKIAAREQKHF--PFEALVSATKN---FHPSNKLGEGGFGPVFKGK 70
N ++++G +E +++ A+ ++ F +E T + F LG G FG V K
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVK 61
Query: 71 -LDDGREIAVKKLSHSSNQGKKEFE---NEAKLLARVQHRNVVNLLGYCAHGAEKLLIYE 126
++ G A+K L K+ E NE ++L V +V L + ++ E
Sbjct: 62 HMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 121
Query: 127 YVINESLDKVL---------------------FSLIKDIQILFRKKKTDIKASNILLDDK 165
YV + L F + + +++R D+K N+L+D +
Sbjct: 122 YVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR----DLKPENLLIDQQ 177
Query: 166 WIPKIADFGMARLFPEDQTHVNTR---VAGTNGYMAPEYVMHGHLSVKADVFSFGVVILE 222
++ DFG A+ V R + GT Y+APE ++ + D ++ GV+I E
Sbjct: 178 GYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 223 LISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGL 279
+ +G F D Q +Y+K S ++ PS +SD D + +Q+ L
Sbjct: 231 MAAGY--PPFFADQPIQ--------IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 85/189 (44%), Gaps = 22/189 (11%)
Query: 58 LGEGGFGPVFKGKL----DDGREIAVKKLSHSSNQGKKE-FENEAKLLARVQHRNVVNLL 112
+GEG FG V +G + +A+K + ++ +E F EA + + H ++V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 113 G------------YCAHGAEK--LLIYEYVIN-ESLDKVLFSLIKDIQILFRKK--KTDI 155
G C G + L + +Y ++ SL + L + L K+ DI
Sbjct: 78 GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDI 137
Query: 156 KASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFS 215
A N+L+ K+ DFG++R + + ++ +MAPE + + +DV+
Sbjct: 138 AARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWM 197
Query: 216 FGVVILELI 224
FGV + E++
Sbjct: 198 FGVCMWEIL 206
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 85/192 (44%), Gaps = 24/192 (12%)
Query: 58 LGEGGFGPVFKGK-LDDGREIAVKKL-----SHSSNQGKKEFENEAKLLARVQHRNVVNL 111
LG G FG V KG + +G I + S Q + + + + H ++V L
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 112 LGYCAHGAEKLLIYEYVINESLDKV---------LFSLIKDIQI---LFRKKK-----TD 154
LG C + +L+ + LD V L +QI ++ ++ +
Sbjct: 99 LGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRN 158
Query: 155 IKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN-GYMAPEYVMHGHLSVKADV 213
+ A N+LL ++ADFG+A L P D + A T +MA E + G + ++DV
Sbjct: 159 LAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDV 218
Query: 214 FSFGVVILELIS 225
+S+GV + EL++
Sbjct: 219 WSYGVTVWELMT 230
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 85/189 (44%), Gaps = 22/189 (11%)
Query: 58 LGEGGFGPVFKGKL----DDGREIAVKKLSHSSNQGKKE-FENEAKLLARVQHRNVVNLL 112
+GEG FG V +G + +A+K + ++ +E F EA + + H ++V L+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 113 G------------YCAHGAEK--LLIYEYVIN-ESLDKVLFSLIKDIQILFRKK--KTDI 155
G C G + L + +Y ++ SL + L + L K+ DI
Sbjct: 80 GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDI 139
Query: 156 KASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFS 215
A N+L+ K+ DFG++R + + ++ +MAPE + + +DV+
Sbjct: 140 AARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWM 199
Query: 216 FGVVILELI 224
FGV + E++
Sbjct: 200 FGVCMWEIL 208
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 131/310 (42%), Gaps = 80/310 (25%)
Query: 16 NLGSSREGDNEEDLEKIAAREQKHF--PFEALVSATKN---FHPSNKLGEGGFGPVFKGK 70
N ++++G +E +++ A+ ++ F +E+ T + F LG G FG V K
Sbjct: 3 NAAAAKKGXEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIRTLGTGSFGRVMLVK 62
Query: 71 ------------LDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQ-----HRNVVNLLG 113
LD + + +K++ H+ N+ + + L +++ + N+ +L
Sbjct: 63 HKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLE 122
Query: 114 YCAHG---------------------AEKLLIYEYVINESLDKVLFSLIKDIQILFRKKK 152
Y G A+ +L +EY+ SLD +++R
Sbjct: 123 YAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL--HSLD-----------LIYR--- 166
Query: 153 TDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTR---VAGTNGYMAPEYVMHGHLSV 209
D+K N+L+D + K+ADFG A+ V R + GT Y+APE ++ +
Sbjct: 167 -DLKPENLLIDQQGYIKVADFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 210 KADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGD 269
D ++ GV+I E+ +G F D Q +Y+K S ++ PS +SD D
Sbjct: 219 AVDWWALGVLIYEMAAGY--PPFFADQPIQ--------IYEKIVSGKVRFPSHFSSDLKD 268
Query: 270 QIAMCIQIGL 279
+ +Q+ L
Sbjct: 269 LLRNLLQVDL 278
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 39/200 (19%)
Query: 58 LGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGK-----------KEFENEAKLLARVQHR 106
LGEG +G V ++AV +++ + K + + E + A + H
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHE 65
Query: 107 NVVNLLGYCAHGAEKLLIYEYVIN-ESLDKVLFSL---IKDIQILFRK------------ 150
NVV G+ G + L EY E D++ + D Q F +
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 151 -KKTDIKASNILLDDKWIPKIADFGMARLFP-EDQTHVNTRVAGTNGYMAPEYVMHGHLS 208
DIK N+LLD++ KI+DFG+A +F ++ + ++ GT Y+APE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 209 VK-ADVFSFGVVILELISGQ 227
+ DV+S G+V+ +++G+
Sbjct: 186 AEPVDVWSCGIVLTAMLAGE 205
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 85/189 (44%), Gaps = 22/189 (11%)
Query: 58 LGEGGFGPVFKGKL----DDGREIAVKKLSHSSNQGKKE-FENEAKLLARVQHRNVVNLL 112
+GEG FG V +G + +A+K + ++ +E F EA + + H ++V L+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 113 G------------YCAHGAEK--LLIYEYVIN-ESLDKVLFSLIKDIQILFRKK--KTDI 155
G C G + L + +Y ++ SL + L + L K+ DI
Sbjct: 83 GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDI 142
Query: 156 KASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFS 215
A N+L+ K+ DFG++R + + ++ +MAPE + + +DV+
Sbjct: 143 AARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWM 202
Query: 216 FGVVILELI 224
FGV + E++
Sbjct: 203 FGVCMWEIL 211
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 89/224 (39%), Gaps = 32/224 (14%)
Query: 34 AREQKHFPFEALVSATKNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEF 93
AR AL F +G G +G V+KG+ ++A K+ + ++E
Sbjct: 8 ARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEI 67
Query: 94 ENEAKLLARV-QHRNVVNLLG-------------------YCAHGAEKLLIYEYVIN--- 130
+ E +L + HRN+ G +C G+ LI N
Sbjct: 68 KQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLK 127
Query: 131 -ESLDKVLFSLIKDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVN 187
E + + +++ + L + K DIK N+LL + K+ DFG++ N
Sbjct: 128 EEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRN 187
Query: 188 TRVAGTNGYMAPEYVM-----HGHLSVKADVFSFGVVILELISG 226
T + GT +MAPE + K+D++S G+ +E+ G
Sbjct: 188 TFI-GTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 85/189 (44%), Gaps = 22/189 (11%)
Query: 58 LGEGGFGPVFKGKL----DDGREIAVKKLSHSSNQGKKE-FENEAKLLARVQHRNVVNLL 112
+GEG FG V +G + +A+K + ++ +E F EA + + H ++V L+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 113 G------------YCAHGAEK--LLIYEYVIN-ESLDKVLFSLIKDIQILFRKK--KTDI 155
G C G + L + +Y ++ SL + L + L K+ DI
Sbjct: 106 GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDI 165
Query: 156 KASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFS 215
A N+L+ K+ DFG++R + + ++ +MAPE + + +DV+
Sbjct: 166 AARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWM 225
Query: 216 FGVVILELI 224
FGV + E++
Sbjct: 226 FGVCMWEIL 234
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 85/189 (44%), Gaps = 22/189 (11%)
Query: 58 LGEGGFGPVFKGKL----DDGREIAVKKLSHSSNQGKKE-FENEAKLLARVQHRNVVNLL 112
+GEG FG V +G + +A+K + ++ +E F EA + + H ++V L+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 113 G------------YCAHGAEK--LLIYEYVIN-ESLDKVLFSLIKDIQILFRKK--KTDI 155
G C G + L + +Y ++ SL + L + L K+ DI
Sbjct: 81 GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDI 140
Query: 156 KASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFS 215
A N+L+ K+ DFG++R + + ++ +MAPE + + +DV+
Sbjct: 141 AARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWM 200
Query: 216 FGVVILELI 224
FGV + E++
Sbjct: 201 FGVCMWEIL 209
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 125/297 (42%), Gaps = 54/297 (18%)
Query: 16 NLGSSREGDNEEDLEKIAAREQKHF--PFEALVSATKN---FHPSNKLGEGGFGPVFKGK 70
N ++++G +E +++ A+ ++ F +E T + F LG G FG V K
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVK 61
Query: 71 -LDDGREIAVKKLSHSSNQGKKEFE---NEAKLLARVQHRNVVNLLGYCAHGAEKLLIYE 126
++ G A+K L K+ E NE ++L V +V L + ++ E
Sbjct: 62 HMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 121
Query: 127 YV----INESLDKV-----------------LFSLIKDIQILFRKKKTDIKASNILLDDK 165
YV + L ++ F + + +++R D+K N+L+D +
Sbjct: 122 YVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR----DLKPENLLIDQQ 177
Query: 166 WIPKIADFGMARLFPEDQTHVNTR---VAGTNGYMAPEYVMHGHLSVKADVFSFGVVILE 222
++ DFG A+ V R + GT Y+APE ++ + D ++ GV+I E
Sbjct: 178 GYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 223 LISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGL 279
+ +G F D Q +Y+K S ++ PS +SD D + +Q+ L
Sbjct: 231 MAAGY--PPFFADQPIQ--------IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 85/189 (44%), Gaps = 22/189 (11%)
Query: 58 LGEGGFGPVFKGKL----DDGREIAVKKLSHSSNQGKKE-FENEAKLLARVQHRNVVNLL 112
+GEG FG V +G + +A+K + ++ +E F EA + + H ++V L+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 113 G------------YCAHGAEK--LLIYEYVIN-ESLDKVLFSLIKDIQILFRKK--KTDI 155
G C G + L + +Y ++ SL + L + L K+ DI
Sbjct: 75 GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDI 134
Query: 156 KASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFS 215
A N+L+ K+ DFG++R + + ++ +MAPE + + +DV+
Sbjct: 135 AARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWM 194
Query: 216 FGVVILELI 224
FGV + E++
Sbjct: 195 FGVCMWEIL 203
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 99/205 (48%), Gaps = 36/205 (17%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 106 RNVVNLLG---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQI 146
NV+ LL H GA+ ++ + + ++ + +++ +++ ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 147 LFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQT-HVNTRVAGTNGYMAPEYVM 203
+ D+K SN+ +++ KI DFG+AR ++ T +V TR Y APE ++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 195
Query: 204 HG-HLSVKADVFSFGVVILELISGQ 227
+ H + D++S G ++ EL++G+
Sbjct: 196 NAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 99/205 (48%), Gaps = 36/205 (17%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 44 QNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 99
Query: 106 RNVVNLLG---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQI 146
NV+ LL H GA+ ++ + + ++ + +++ +++ ++
Sbjct: 100 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 159
Query: 147 LFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQT-HVNTRVAGTNGYMAPEYVM 203
+ D+K SN+ +++ KI DFG+AR ++ T +V TR Y APE ++
Sbjct: 160 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 214
Query: 204 HG-HLSVKADVFSFGVVILELISGQ 227
+ H + D++S G ++ EL++G+
Sbjct: 215 NWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 125/297 (42%), Gaps = 54/297 (18%)
Query: 16 NLGSSREGDNEEDLEKIAAREQKHF--PFEALVSATKN---FHPSNKLGEGGFGPVFKGK 70
N ++++G +E +++ A+ ++ F +E T + F LG G FG V K
Sbjct: 3 NAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVK 62
Query: 71 -LDDGREIAVKKLSHSSNQGKKEFE---NEAKLLARVQHRNVVNLLGYCAHGAEKLLIYE 126
++ G A+K L K+ E NE ++L V +V L + ++ E
Sbjct: 63 HMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 122
Query: 127 YV----INESLDKV-----------------LFSLIKDIQILFRKKKTDIKASNILLDDK 165
YV + L ++ F + + +++R D+K N+L+D +
Sbjct: 123 YVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR----DLKPENLLIDQQ 178
Query: 166 WIPKIADFGMARLFPEDQTHVNTR---VAGTNGYMAPEYVMHGHLSVKADVFSFGVVILE 222
++ DFG A+ V R + GT Y+APE ++ + D ++ GV+I E
Sbjct: 179 GYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
Query: 223 LISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGL 279
+ +G F D Q +Y+K S ++ PS +SD D + +Q+ L
Sbjct: 232 MAAGY--PPFFADQPIQ--------IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 278
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 125/297 (42%), Gaps = 54/297 (18%)
Query: 16 NLGSSREGDNEEDLEKIAAREQKHF--PFEALVSATKN---FHPSNKLGEGGFGPVFKGK 70
N ++++G +E +++ A+ ++ F +E T + F LG G FG V K
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVK 61
Query: 71 -LDDGREIAVKKLSHSSNQGKKEFE---NEAKLLARVQHRNVVNLLGYCAHGAEKLLIYE 126
++ G A+K L K+ E NE ++L V +V L + ++ E
Sbjct: 62 HMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 121
Query: 127 YV----INESLDKV-----------------LFSLIKDIQILFRKKKTDIKASNILLDDK 165
YV + L ++ F + + +++R D+K N+L+D +
Sbjct: 122 YVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR----DLKPENLLIDQQ 177
Query: 166 WIPKIADFGMARLFPEDQTHVNTR---VAGTNGYMAPEYVMHGHLSVKADVFSFGVVILE 222
++ DFG A+ V R + GT Y+APE ++ + D ++ GV+I E
Sbjct: 178 GYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 223 LISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGL 279
+ +G F D Q +Y+K S ++ PS +SD D + +Q+ L
Sbjct: 231 MAAGY--PPFFADQPIQ--------IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 125/297 (42%), Gaps = 54/297 (18%)
Query: 16 NLGSSREGDNEEDLEKIAAREQKHF--PFEALVSATKN---FHPSNKLGEGGFGPVFKGK 70
N ++++G +E +++ A+ ++ F +E T + F LG G FG V K
Sbjct: 3 NAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVK 62
Query: 71 -LDDGREIAVKKLSHSSNQGKKEFE---NEAKLLARVQHRNVVNLLGYCAHGAEKLLIYE 126
++ G A+K L K+ E NE ++L V +V L + ++ E
Sbjct: 63 HMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 122
Query: 127 YV----INESLDKV-----------------LFSLIKDIQILFRKKKTDIKASNILLDDK 165
YV + L ++ F + + +++R D+K N+L+D +
Sbjct: 123 YVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR----DLKPENLLIDQQ 178
Query: 166 WIPKIADFGMARLFPEDQTHVNTR---VAGTNGYMAPEYVMHGHLSVKADVFSFGVVILE 222
++ DFG A+ V R + GT Y+APE ++ + D ++ GV+I E
Sbjct: 179 GYIQVTDFGFAK-------RVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
Query: 223 LISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGL 279
+ +G F D Q +Y+K S ++ PS +SD D + +Q+ L
Sbjct: 232 MAAGY--PPFFADQPIQ--------IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 278
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 99/205 (48%), Gaps = 36/205 (17%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 45 QNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 100
Query: 106 RNVVNLLG---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQI 146
NV+ LL H GA+ ++ + + ++ + +++ +++ ++
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 160
Query: 147 LFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQT-HVNTRVAGTNGYMAPEYVM 203
+ D+K SN+ +++ KI DFG+AR ++ T +V TR Y APE ++
Sbjct: 161 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 215
Query: 204 HG-HLSVKADVFSFGVVILELISGQ 227
+ H + D++S G ++ EL++G+
Sbjct: 216 NWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 125/297 (42%), Gaps = 54/297 (18%)
Query: 16 NLGSSREGDNEEDLEKIAAREQKHF--PFEALVSATKN---FHPSNKLGEGGFGPVFKGK 70
N ++++G +E +++ A+ ++ F +E T + F LG G FG V K
Sbjct: 3 NAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVK 62
Query: 71 -LDDGREIAVKKLSHSSNQGKKEFE---NEAKLLARVQHRNVVNLLGYCAHGAEKLLIYE 126
++ G A+K L K+ E NE ++L V +V L + ++ E
Sbjct: 63 HMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 122
Query: 127 YV----INESLDKV-----------------LFSLIKDIQILFRKKKTDIKASNILLDDK 165
YV + L ++ F + + +++R D+K N+L+D +
Sbjct: 123 YVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR----DLKPENLLIDQQ 178
Query: 166 WIPKIADFGMARLFPEDQTHVNTR---VAGTNGYMAPEYVMHGHLSVKADVFSFGVVILE 222
++ DFG A+ V R + GT Y+APE ++ + D ++ GV+I E
Sbjct: 179 GYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
Query: 223 LISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGL 279
+ +G F D Q +Y+K S ++ PS +SD D + +Q+ L
Sbjct: 232 MAAGY--PPFFADQPIQ--------IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 278
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 93/196 (47%), Gaps = 31/196 (15%)
Query: 58 LGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQHRNVVNLLG 113
+G G +G V G +AVKKLS S K+ + E +LL ++H NV+ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 94
Query: 114 ---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQILFRKK--K 152
H GA+ ++ + + ++ + +++ +++ ++ +
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 154
Query: 153 TDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHG-HLSVKA 211
D+K SN+ +++ KI DFG+AR ++ T T Y APE +++ H +
Sbjct: 155 RDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWMHYNQTV 210
Query: 212 DVFSFGVVILELISGQ 227
D++S G ++ EL++G+
Sbjct: 211 DIWSVGCIMAELLTGR 226
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 99/205 (48%), Gaps = 36/205 (17%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 32 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 87
Query: 106 RNVVNLLG---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQI 146
NV+ LL H GA+ ++ + + ++ + +++ +++ ++
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 147
Query: 147 LFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQT-HVNTRVAGTNGYMAPEYVM 203
+ D+K SN+ +++ KI DFG+AR ++ T +V TR Y APE ++
Sbjct: 148 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYRAPEIML 202
Query: 204 HG-HLSVKADVFSFGVVILELISGQ 227
+ H + D++S G ++ EL++G+
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 26/193 (13%)
Query: 58 LGEGGFGPVFKGK-LDDGREIAVKKLS--HSSNQGKKEF-ENEAKLLARVQHRNVVNL-- 111
LGEG F V + L RE A+K L H + K + E +++R+ H V L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 112 -----------LGYCAHGAEKLLIYEYVI---NESLDKVLFS-LIKDIQILFRKK--KTD 154
L Y +G LL Y I +E+ + + ++ ++ L K D
Sbjct: 100 TFQDDEKLYFGLSYAKNGC--LLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 157
Query: 155 IKASNILLDDKWIPKIADFGMARLF-PEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADV 213
+K NILL++ +I DFG A++ PE + GT Y++PE + S +D+
Sbjct: 158 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSSDL 217
Query: 214 FSFGVVILELISG 226
++ G +I +L++G
Sbjct: 218 WALGCIIYQLVAG 230
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 125/297 (42%), Gaps = 54/297 (18%)
Query: 16 NLGSSREGDNEEDLEKIAAREQKHF--PFEALVSATKN---FHPSNKLGEGGFGPVFKGK 70
N ++++G +E +++ A+ ++ F +E T + F LG G FG V K
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVK 61
Query: 71 -LDDGREIAVKKLSHSSNQGKKEFE---NEAKLLARVQHRNVVNLLGYCAHGAEKLLIYE 126
++ G A+K L K+ E NE ++L V +V L + ++ E
Sbjct: 62 HMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 121
Query: 127 YV----INESLDKV-----------------LFSLIKDIQILFRKKKTDIKASNILLDDK 165
YV + L ++ F + + +++R D+K N+L+D +
Sbjct: 122 YVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR----DLKPENLLIDQQ 177
Query: 166 WIPKIADFGMARLFPEDQTHVNTR---VAGTNGYMAPEYVMHGHLSVKADVFSFGVVILE 222
++ DFG A+ V R + GT Y+APE ++ + D ++ GV+I E
Sbjct: 178 GYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 223 LISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGL 279
+ +G F D Q +Y+K S ++ PS +SD D + +Q+ L
Sbjct: 231 MAAGY--PPFFADQPIQ--------IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 85/189 (44%), Gaps = 22/189 (11%)
Query: 58 LGEGGFGPVFKGKL----DDGREIAVKKLSHSSNQGKKE-FENEAKLLARVQHRNVVNLL 112
+GEG FG V +G + +A+K + ++ +E F EA + + H ++V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 113 G------------YCAHGAEK--LLIYEYVIN-ESLDKVLFSLIKDIQILFRKK--KTDI 155
G C G + L + +Y ++ SL + L + L K+ DI
Sbjct: 78 GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDI 137
Query: 156 KASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFS 215
A N+L+ K+ DFG++R + + ++ +MAPE + + +DV+
Sbjct: 138 AARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWM 197
Query: 216 FGVVILELI 224
FGV + E++
Sbjct: 198 FGVCMWEIL 206
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 124/298 (41%), Gaps = 56/298 (18%)
Query: 16 NLGSSREGDNEEDLEKIAAREQKHFPFEALVSATKN------FHPSNKLGEGGFGPVFKG 69
N ++++G +E +++ A+ ++ F + + ++N F LG G FG V
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDF-LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLV 60
Query: 70 KL-DDGREIAVKKLSHSSNQGKKEFE---NEAKLLARVQHRNVVNLLGYCAHGAEKLLIY 125
K + G A+K L K+ E NE ++L V +V L + ++
Sbjct: 61 KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 126 EYVINESLDKVL---------------------FSLIKDIQILFRKKKTDIKASNILLDD 164
EYV + L F + + +++R D+K N+L+D
Sbjct: 121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR----DLKPENLLIDQ 176
Query: 165 KWIPKIADFGMARLFPEDQTHVNTR---VAGTNGYMAPEYVMHGHLSVKADVFSFGVVIL 221
+ ++ DFG A+ V R +AGT Y+APE ++ + D ++ GV+I
Sbjct: 177 QGYIQVTDFGFAK-------RVKGRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 222 ELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGL 279
E+ +G F D Q +Y+K S ++ PS +SD D + +Q+ L
Sbjct: 230 EMAAGY--PPFFADQPIQ--------IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 96/197 (48%), Gaps = 33/197 (16%)
Query: 58 LGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQHRNVVNLLG 113
+G G +G V G +AVKKLS S K+ + E +LL ++H NV+ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 84
Query: 114 ---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQILFRKK--K 152
H GA+ ++ + + ++ + +++ +++ ++ +
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 144
Query: 153 TDIKASNILLDDKWIPKIADFGMARLFPEDQT-HVNTRVAGTNGYMAPEYVMHG-HLSVK 210
D+K SN+ +++ KI DFG+AR ++ T +V TR Y APE +++ H +
Sbjct: 145 RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQT 199
Query: 211 ADVFSFGVVILELISGQ 227
D++S G ++ EL++G+
Sbjct: 200 VDIWSVGCIMAELLTGR 216
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 34/197 (17%)
Query: 58 LGEGGFGPVF---KGKLDDGREI-AVKKLSHSSNQGKKEFEN--EAKLLARVQHRNVVNL 111
LG+G FG VF K D R++ A+K L ++ + + E +L V H +V L
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 112 LGYCAHGAEKL-LIYEYVINESL-----DKVLFS----------------LIKDIQILFR 149
Y KL LI +++ L +V+F+ + + I++R
Sbjct: 92 -HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYR 150
Query: 150 KKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSV 209
D+K NILLD++ K+ DFG+++ D GT YMAPE V +
Sbjct: 151 ----DLKPENILLDEEGHIKLTDFGLSKE-SIDHEKKAYSFCGTVEYMAPEVVNRRGHTQ 205
Query: 210 KADVFSFGVVILELISG 226
AD +SFGV++ E+++G
Sbjct: 206 SADWWSFGVLMFEMLTG 222
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 99/205 (48%), Gaps = 36/205 (17%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 106 RNVVNLLG---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQI 146
NV+ LL H GA+ ++ + + ++ + +++ +++ ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 147 LFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQT-HVNTRVAGTNGYMAPEYVM 203
+ D+K SN+ +++ KI DFG+AR ++ T +V TR Y APE ++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 195
Query: 204 HG-HLSVKADVFSFGVVILELISGQ 227
+ H + D++S G ++ EL++G+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 96/197 (48%), Gaps = 33/197 (16%)
Query: 58 LGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQHRNVVNLLG 113
+G G +G V G +AVKKLS S K+ + E +LL ++H NV+ LL
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 98
Query: 114 ---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQILFRKK--K 152
H GA+ ++ + + ++ + +++ +++ ++ +
Sbjct: 99 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 158
Query: 153 TDIKASNILLDDKWIPKIADFGMARLFPEDQT-HVNTRVAGTNGYMAPEYVMHG-HLSVK 210
D+K SN+ +++ KI DFG+AR ++ T +V TR Y APE +++ H +
Sbjct: 159 RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQT 213
Query: 211 ADVFSFGVVILELISGQ 227
D++S G ++ EL++G+
Sbjct: 214 VDIWSVGCIMAELLTGR 230
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 99/205 (48%), Gaps = 36/205 (17%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 32 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 87
Query: 106 RNVVNLLG---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQI 146
NV+ LL H GA+ ++ + + ++ + +++ +++ ++
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 147
Query: 147 LFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQT-HVNTRVAGTNGYMAPEYVM 203
+ D+K SN+ +++ KI DFG+AR ++ T +V TR Y APE ++
Sbjct: 148 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYRAPEIML 202
Query: 204 HG-HLSVKADVFSFGVVILELISGQ 227
+ H + D++S G ++ EL++G+
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 34/200 (17%)
Query: 58 LGEGGFGPVFKG-KLDDGREIAVKKLSHSSNQGKKEFEN------EAKLLARV----QHR 106
LG+GGFG VF G +L D ++A+K + + G + E LL +V H
Sbjct: 39 LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHP 98
Query: 107 NVVNLLGYCAHGAEKLLI----------YEYV-----INESLDKVLFS-LIKDIQILFRK 150
V+ LL + +L+ ++Y+ + E + F ++ IQ +
Sbjct: 99 GVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSR 158
Query: 151 KKT--DIKASNILLD-DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVM-HGH 206
DIK NIL+D + K+ DFG L D+ + T GT Y PE++ H +
Sbjct: 159 GVVHRDIKDENILIDLRRGCAKLIDFGSGALL-HDEPY--TDFDGTRVYSPPEWISRHQY 215
Query: 207 LSVKADVFSFGVVILELISG 226
++ A V+S G+++ +++ G
Sbjct: 216 HALPATVWSLGILLYDMVCG 235
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 26/198 (13%)
Query: 52 FHPSNKLGEGGFGPVF--KGKLDD-GREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNV 108
+ KLG G +G V + K+ R I + + + S + E +L + H N+
Sbjct: 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNI 98
Query: 109 VNLLGY------------CAHGAEKL--LIYEYVINESLDKVLF-SLIKDIQILFRKK-- 151
+ L + C G E +I+ NE V+ ++ + L +
Sbjct: 99 MKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIV 158
Query: 152 KTDIKASNILLDDK---WIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLS 208
D+K N+LL+ K + KI DFG++ +F E+Q + R+ GT Y+APE V+
Sbjct: 159 HRDLKPENLLLESKEKDALIKIVDFGLSAVF-ENQKKMKERL-GTAYYIAPE-VLRKKYD 215
Query: 209 VKADVFSFGVVILELISG 226
K DV+S GV++ L++G
Sbjct: 216 EKCDVWSIGVILFILLAG 233
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 99/205 (48%), Gaps = 36/205 (17%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 32 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 87
Query: 106 RNVVNLLG---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQI 146
NV+ LL H GA+ ++ + + ++ + +++ +++ ++
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 147
Query: 147 LFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQT-HVNTRVAGTNGYMAPEYVM 203
+ D+K SN+ +++ KI DFG+AR ++ T +V TR Y APE ++
Sbjct: 148 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYRAPEIML 202
Query: 204 HG-HLSVKADVFSFGVVILELISGQ 227
+ H + D++S G ++ EL++G+
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 22/189 (11%)
Query: 58 LGEGGFGPVFKGKL----DDGREIAVKKLSHSSNQGKKE-FENEAKLLARVQHRNVVNLL 112
+GEG FG V +G + +A+K + ++ +E F EA + + H ++V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 113 GYCAHGAEKLLIYEYVINE----------SLDK---VLFSLIKDIQILFRKKKT----DI 155
G +++ + E SLD +L++ + + + K DI
Sbjct: 78 GVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDI 137
Query: 156 KASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFS 215
A N+L+ K+ DFG++R + + ++ +MAPE + + +DV+
Sbjct: 138 AARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWM 197
Query: 216 FGVVILELI 224
FGV + E++
Sbjct: 198 FGVCMWEIL 206
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 95/197 (48%), Gaps = 33/197 (16%)
Query: 58 LGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQHRNVVNLLG 113
+G G +G V G +AVKKLS S K+ + E +LL ++H NV+ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 84
Query: 114 YC--AHGAEK---LLIYEYVINESLDKV--------------LFSLIKDIQILFRKK--K 152
A E+ + + +++ L+ + ++ +++ ++ +
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHSADIIH 144
Query: 153 TDIKASNILLDDKWIPKIADFGMARLFPEDQT-HVNTRVAGTNGYMAPEYVMHG-HLSVK 210
D+K SN+ +++ KI DFG+AR ++ T +V TR Y APE +++ H +
Sbjct: 145 RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQT 199
Query: 211 ADVFSFGVVILELISGQ 227
D++S G ++ EL++G+
Sbjct: 200 VDIWSVGCIMAELLTGR 216
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 125/297 (42%), Gaps = 54/297 (18%)
Query: 16 NLGSSREGDNEEDLEKIAAREQKHF--PFEALVSATKN---FHPSNKLGEGGFGPVFKGK 70
N ++++G +E +++ A+ ++ F +E T + F LG G FG V K
Sbjct: 2 NAAAAKKGXEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVK 61
Query: 71 -LDDGREIAVKKLSHSSNQGKKEFE---NEAKLLARVQHRNVVNLLGYCAHGAEKLLIYE 126
++ G A+K L K+ E NE ++L V +V L + ++ E
Sbjct: 62 HMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 121
Query: 127 YV----INESLDKV-----------------LFSLIKDIQILFRKKKTDIKASNILLDDK 165
YV + L ++ F + + +++R D+K N+L+D +
Sbjct: 122 YVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR----DLKPENLLIDQQ 177
Query: 166 WIPKIADFGMARLFPEDQTHVNTR---VAGTNGYMAPEYVMHGHLSVKADVFSFGVVILE 222
++ DFG A+ V R + GT Y+APE ++ + D ++ GV+I E
Sbjct: 178 GYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 223 LISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGL 279
+ +G F D Q +Y+K S ++ PS +SD D + +Q+ L
Sbjct: 231 MAAGY--PPFFADQPIQ--------IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 85/192 (44%), Gaps = 24/192 (12%)
Query: 58 LGEGGFGPVFKGK-LDDGREIAVKKL-----SHSSNQGKKEFENEAKLLARVQHRNVVNL 111
LG G FG V KG + +G I + S Q + + + + H ++V L
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 112 LGYCAHGAEKLLIYEYVINESLDKV---------LFSLIKDIQI---LFRKKK-----TD 154
LG C + +L+ + LD V L +QI ++ ++ +
Sbjct: 81 LGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRN 140
Query: 155 IKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTN-GYMAPEYVMHGHLSVKADV 213
+ A N+LL ++ADFG+A L P D + A T +MA E + G + ++DV
Sbjct: 141 LAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDV 200
Query: 214 FSFGVVILELIS 225
+S+GV + EL++
Sbjct: 201 WSYGVTVWELMT 212
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 86/189 (45%), Gaps = 22/189 (11%)
Query: 58 LGEGGFGPVFKGKL----DDGREIAVKKLSH-SSNQGKKEFENEAKLLARVQHRNVVNLL 112
+GEG FG V +G + +A+K + +S+ +++F EA + + H ++V L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 113 GYCAHGAEKLLIYEYVINE----------SLDK---VLFSLIKDIQILFRKKKT----DI 155
G +++ + E SLD +L++ + + + K DI
Sbjct: 458 GVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDI 517
Query: 156 KASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFS 215
A N+L+ K+ DFG++R + + ++ +MAPE + + +DV+
Sbjct: 518 AARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWM 577
Query: 216 FGVVILELI 224
FGV + E++
Sbjct: 578 FGVCMWEIL 586
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 125/297 (42%), Gaps = 54/297 (18%)
Query: 16 NLGSSREGDNEEDLEKIAAREQKHF--PFEALVSATKN---FHPSNKLGEGGFGPVFKGK 70
N ++++G +E +++ A+ ++ F +E T + F LG G FG V K
Sbjct: 2 NAAAAKKGXEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVK 61
Query: 71 -LDDGREIAVKKLSHSSNQGKKEFE---NEAKLLARVQHRNVVNLLGYCAHGAEKLLIYE 126
++ G A+K L K+ E NE ++L V +V L + ++ E
Sbjct: 62 HMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 121
Query: 127 YV----INESLDKV-----------------LFSLIKDIQILFRKKKTDIKASNILLDDK 165
YV + L ++ F + + +++R D+K N+L+D +
Sbjct: 122 YVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR----DLKPENLLIDQQ 177
Query: 166 WIPKIADFGMARLFPEDQTHVNTR---VAGTNGYMAPEYVMHGHLSVKADVFSFGVVILE 222
++ DFG A+ V R + GT Y+APE ++ + D ++ GV+I E
Sbjct: 178 GYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 223 LISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGL 279
+ +G F D Q +Y+K S ++ PS +SD D + +Q+ L
Sbjct: 231 MAAGY--PPFFADQPIQ--------IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 89/203 (43%), Gaps = 41/203 (20%)
Query: 58 LGEGGFGPVFKGKLD-DGREIAVKKLSHSSN--QGKKEFENEAKLLARVQHRNVVNL--- 111
+G G +G V + G+++A+KK+ ++ + K E K+L +H N++ +
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 122
Query: 112 -----------------------LGYCAHGAEKLLIYEYVINESLDKVLFSLIKDIQILF 148
L H ++ L + E + L+ L++ ++ +
Sbjct: 123 LRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTL------EHVRYFLYQLLRGLKYMH 176
Query: 149 RKK--KTDIKASNILLDDKWIPKIADFGMARLF---PEDQTHVNTRVAGTNGYMAPEYVM 203
+ D+K SN+L+++ KI DFGMAR P + + T T Y APE ++
Sbjct: 177 SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELML 236
Query: 204 HGHLSVKA-DVFSFGVVILELIS 225
H +A D++S G + E+++
Sbjct: 237 SLHEYTQAIDLWSVGCIFGEMLA 259
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 99/205 (48%), Gaps = 36/205 (17%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 37 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 92
Query: 106 RNVVNLLG---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQI 146
NV+ LL H GA+ ++ + + ++ + +++ +++ ++
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 152
Query: 147 LFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQT-HVNTRVAGTNGYMAPEYVM 203
+ D+K SN+ +++ KI DFG+AR ++ T +V TR Y APE ++
Sbjct: 153 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 207
Query: 204 HG-HLSVKADVFSFGVVILELISGQ 227
+ H + D++S G ++ EL++G+
Sbjct: 208 NWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 99/205 (48%), Gaps = 36/205 (17%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 106 RNVVNLLG---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQI 146
NV+ LL H GA+ ++ + + ++ + +++ +++ ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 147 LFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQT-HVNTRVAGTNGYMAPEYVM 203
+ D+K SN+ +++ KI DFG+AR ++ T +V TR Y APE ++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 195
Query: 204 HG-HLSVKADVFSFGVVILELISGQ 227
+ H + D++S G ++ EL++G+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 99/205 (48%), Gaps = 36/205 (17%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 37 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 92
Query: 106 RNVVNLLG---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQI 146
NV+ LL H GA+ ++ + + ++ + +++ +++ ++
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 152
Query: 147 LFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQT-HVNTRVAGTNGYMAPEYVM 203
+ D+K SN+ +++ KI DFG+AR ++ T +V TR Y APE ++
Sbjct: 153 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 207
Query: 204 HG-HLSVKADVFSFGVVILELISGQ 227
+ H + D++S G ++ EL++G+
Sbjct: 208 NWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 97/207 (46%), Gaps = 40/207 (19%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 45 QNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 100
Query: 106 RNVVNLLG---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQI 146
NV+ LL H GA+ ++ + + ++ + +++ +++ ++
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 160
Query: 147 LFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAG---TNGYMAPEY 201
+ D+K SN+ +++ KI DFG+AR H + + G T Y APE
Sbjct: 161 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMXGXVATRWYRAPEI 213
Query: 202 VMHG-HLSVKADVFSFGVVILELISGQ 227
+++ H + D++S G ++ EL++G+
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 99/205 (48%), Gaps = 36/205 (17%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 37 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYR-ELRLLKHMKH 92
Query: 106 RNVVNLLG---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQI 146
NV+ LL H GA+ ++ + + ++ + +++ +++ ++
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 152
Query: 147 LFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQT-HVNTRVAGTNGYMAPEYVM 203
+ D+K SN+ +++ KI DFG+AR ++ T +V TR Y APE ++
Sbjct: 153 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 207
Query: 204 HG-HLSVKADVFSFGVVILELISGQ 227
+ H + D++S G ++ EL++G+
Sbjct: 208 NWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 99/205 (48%), Gaps = 36/205 (17%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 27 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 82
Query: 106 RNVVNLLG---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQI 146
NV+ LL H GA+ ++ + + ++ + +++ +++ ++
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 142
Query: 147 LFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQT-HVNTRVAGTNGYMAPEYVM 203
+ D+K SN+ +++ KI DFG+AR ++ T +V TR Y APE ++
Sbjct: 143 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 197
Query: 204 HG-HLSVKADVFSFGVVILELISGQ 227
+ H + D++S G ++ EL++G+
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 125/297 (42%), Gaps = 54/297 (18%)
Query: 16 NLGSSREGDNEEDLEKIAAREQKHF--PFEALVSATKN---FHPSNKLGEGGFGPVFKGK 70
N ++++G +E +++ A+ ++ F +E T + F LG G FG V K
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVK 61
Query: 71 -LDDGREIAVKKLSHSSNQGKKEFE---NEAKLLARVQHRNVVNLLGYCAHGAEKLLIYE 126
++ G A+K L KE E NE ++L V +V L + ++ E
Sbjct: 62 HMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 121
Query: 127 YV----INESLDKV-----------------LFSLIKDIQILFRKKKTDIKASNILLDDK 165
Y + L ++ F + + +++R D+K N+++D +
Sbjct: 122 YAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR----DLKPENLMIDQQ 177
Query: 166 WIPKIADFGMARLFPEDQTHVNTR---VAGTNGYMAPEYVMHGHLSVKADVFSFGVVILE 222
++ DFG+A+ V R + GT Y+APE ++ + D ++ GV+I E
Sbjct: 178 GYIQVTDFGLAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 223 LISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGL 279
+ +G F D Q +Y+K S ++ PS +SD D + +Q+ L
Sbjct: 231 MAAGY--PPFFADQPIQ--------IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 99/205 (48%), Gaps = 36/205 (17%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 27 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 82
Query: 106 RNVVNLLG---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQI 146
NV+ LL H GA+ ++ + + ++ + +++ +++ ++
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 142
Query: 147 LFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQT-HVNTRVAGTNGYMAPEYVM 203
+ D+K SN+ +++ KI DFG+AR ++ T +V TR Y APE ++
Sbjct: 143 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 197
Query: 204 HG-HLSVKADVFSFGVVILELISGQ 227
+ H + D++S G ++ EL++G+
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 83/189 (43%), Gaps = 22/189 (11%)
Query: 58 LGEGGFGPVFKGKL----DDGREIAVKKLSHSSNQGKKE-FENEAKLLARVQHRNVVNLL 112
+GEG FG V +G + +A+K + ++ +E F EA + + H ++V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 113 GYCAHGAEKLLIYEYVINE----------SLDK---VLFSLIKDIQILFRKKKT----DI 155
G +++ + E SLD +L++ + + + K DI
Sbjct: 78 GVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDI 137
Query: 156 KASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFS 215
A N+L+ K+ DFG++R + ++ +MAPE + + +DV+
Sbjct: 138 AARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFTSASDVWM 197
Query: 216 FGVVILELI 224
FGV + E++
Sbjct: 198 FGVCMWEIL 206
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 99/205 (48%), Gaps = 36/205 (17%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 44 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 99
Query: 106 RNVVNLLG---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQI 146
NV+ LL H GA+ ++ + + ++ + +++ +++ ++
Sbjct: 100 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 159
Query: 147 LFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQT-HVNTRVAGTNGYMAPEYVM 203
+ D+K SN+ +++ KI DFG+AR ++ T +V TR Y APE ++
Sbjct: 160 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 214
Query: 204 HG-HLSVKADVFSFGVVILELISGQ 227
+ H + D++S G ++ EL++G+
Sbjct: 215 NWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 34/197 (17%)
Query: 58 LGEGGFGPVF---KGKLDDGREI-AVKKLSHSSNQGKKEFEN--EAKLLARVQHRNVVNL 111
LG+G FG VF K D R++ A+K L ++ + + E +L V H +V L
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 112 LGYCAHGAEKL-LIYEYVINESL-----DKVLFS----------------LIKDIQILFR 149
Y KL LI +++ L +V+F+ + + I++R
Sbjct: 92 -HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYR 150
Query: 150 KKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSV 209
D+K NILLD++ K+ DFG+++ + + + GT YMAPE V +
Sbjct: 151 ----DLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS-FCGTVEYMAPEVVNRRGHTQ 205
Query: 210 KADVFSFGVVILELISG 226
AD +SFGV++ E+++G
Sbjct: 206 SADWWSFGVLMFEMLTG 222
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 99/205 (48%), Gaps = 36/205 (17%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 106 RNVVNLLG---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQI 146
NV+ LL H GA+ ++ + + ++ + +++ +++ ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 147 LFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQT-HVNTRVAGTNGYMAPEYVM 203
+ D+K SN+ +++ KI DFG+AR ++ T +V TR Y APE ++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 195
Query: 204 HG-HLSVKADVFSFGVVILELISGQ 227
+ H + D++S G ++ EL++G+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 99/205 (48%), Gaps = 36/205 (17%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 106 RNVVNLLG---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQI 146
NV+ LL H GA+ ++ + + ++ + +++ +++ ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 147 LFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQT-HVNTRVAGTNGYMAPEYVM 203
+ D+K SN+ +++ KI DFG+AR ++ T +V TR Y APE ++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 195
Query: 204 HG-HLSVKADVFSFGVVILELISGQ 227
+ H + D++S G ++ EL++G+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 99/205 (48%), Gaps = 36/205 (17%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 36 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 91
Query: 106 RNVVNLLG---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQI 146
NV+ LL H GA+ ++ + + ++ + +++ +++ ++
Sbjct: 92 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 151
Query: 147 LFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQT-HVNTRVAGTNGYMAPEYVM 203
+ D+K SN+ +++ KI DFG+AR ++ T +V TR Y APE ++
Sbjct: 152 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 206
Query: 204 HG-HLSVKADVFSFGVVILELISGQ 227
+ H + D++S G ++ EL++G+
Sbjct: 207 NWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 99/205 (48%), Gaps = 36/205 (17%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 45 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 100
Query: 106 RNVVNLLG---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQI 146
NV+ LL H GA+ ++ + + ++ + +++ +++ ++
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 160
Query: 147 LFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQT-HVNTRVAGTNGYMAPEYVM 203
+ D+K SN+ +++ KI DFG+AR ++ T +V TR Y APE ++
Sbjct: 161 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 215
Query: 204 HG-HLSVKADVFSFGVVILELISGQ 227
+ H + D++S G ++ EL++G+
Sbjct: 216 NWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 34/197 (17%)
Query: 58 LGEGGFGPVF---KGKLDDGREI-AVKKLSHSSNQGKKEFEN--EAKLLARVQHRNVVNL 111
LG+G FG VF K D R++ A+K L ++ + + E +L V H +V L
Sbjct: 33 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 92
Query: 112 LGYCAHGAEKL-LIYEYVINESL-----DKVLFS----------------LIKDIQILFR 149
Y KL LI +++ L +V+F+ + + I++R
Sbjct: 93 -HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYR 151
Query: 150 KKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSV 209
D+K NILLD++ K+ DFG+++ + + + GT YMAPE V +
Sbjct: 152 ----DLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS-FCGTVEYMAPEVVNRRGHTQ 206
Query: 210 KADVFSFGVVILELISG 226
AD +SFGV++ E+++G
Sbjct: 207 SADWWSFGVLMFEMLTG 223
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 99/205 (48%), Gaps = 36/205 (17%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 31 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 86
Query: 106 RNVVNLLG---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQI 146
NV+ LL H GA+ ++ + + ++ + +++ +++ ++
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 146
Query: 147 LFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQT-HVNTRVAGTNGYMAPEYVM 203
+ D+K SN+ +++ KI DFG+AR ++ T +V TR Y APE ++
Sbjct: 147 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 201
Query: 204 HG-HLSVKADVFSFGVVILELISGQ 227
+ H + D++S G ++ EL++G+
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 99/205 (48%), Gaps = 36/205 (17%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 106 RNVVNLLG---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQI 146
NV+ LL H GA+ ++ + + ++ + +++ +++ ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 147 LFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQT-HVNTRVAGTNGYMAPEYVM 203
+ D+K SN+ +++ KI DFG+AR ++ T +V TR Y APE ++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 195
Query: 204 HG-HLSVKADVFSFGVVILELISGQ 227
+ H + D++S G ++ EL++G+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 81/198 (40%), Gaps = 24/198 (12%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFEN----EAKLLARVQH 105
++F LG+G FG V+ + + I K+ + K E+ E ++ + ++H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 106 RNVVNLLGYCAHGAEKLLIYEY----VINESLDKV-----------LFSLIKDIQILFRK 150
N++ L GY LI EY + L K+ + L + K
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSK 131
Query: 151 K--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLS 208
+ DIK N+LL KIADFG + P + + GT Y+ PE +
Sbjct: 132 RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR---RDTLCGTLDYLPPEMIEGRMHD 188
Query: 209 VKADVFSFGVVILELISG 226
K D++S GV+ E + G
Sbjct: 189 EKVDLWSLGVLCYEFLVG 206
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 99/205 (48%), Gaps = 36/205 (17%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 27 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 82
Query: 106 RNVVNLLG---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQI 146
NV+ LL H GA+ ++ + + ++ + +++ +++ ++
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 142
Query: 147 LFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQT-HVNTRVAGTNGYMAPEYVM 203
+ D+K SN+ +++ KI DFG+AR ++ T +V TR Y APE ++
Sbjct: 143 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 197
Query: 204 HG-HLSVKADVFSFGVVILELISGQ 227
+ H + D++S G ++ EL++G+
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 99/205 (48%), Gaps = 36/205 (17%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 32 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 87
Query: 106 RNVVNLLG---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQI 146
NV+ LL H GA+ ++ + + ++ + +++ +++ ++
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 147
Query: 147 LFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQT-HVNTRVAGTNGYMAPEYVM 203
+ D+K SN+ +++ KI DFG+AR ++ T +V TR Y APE ++
Sbjct: 148 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 202
Query: 204 HG-HLSVKADVFSFGVVILELISGQ 227
+ H + D++S G ++ EL++G+
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 99/205 (48%), Gaps = 36/205 (17%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 106 RNVVNLLG---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQI 146
NV+ LL H GA+ ++ + + ++ + +++ +++ ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 147 LFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQT-HVNTRVAGTNGYMAPEYVM 203
+ D+K SN+ +++ KI DFG+AR ++ T +V TR Y APE ++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 195
Query: 204 HG-HLSVKADVFSFGVVILELISGQ 227
+ H + D++S G ++ EL++G+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 99/205 (48%), Gaps = 36/205 (17%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 30 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 85
Query: 106 RNVVNLLG---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQI 146
NV+ LL H GA+ ++ + + ++ + +++ +++ ++
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 145
Query: 147 LFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQT-HVNTRVAGTNGYMAPEYVM 203
+ D+K SN+ +++ KI DFG+AR ++ T +V TR Y APE ++
Sbjct: 146 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 200
Query: 204 HG-HLSVKADVFSFGVVILELISGQ 227
+ H + D++S G ++ EL++G+
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 125/297 (42%), Gaps = 54/297 (18%)
Query: 16 NLGSSREGDNEEDLEKIAAREQKHF--PFEALVSATKN---FHPSNKLGEGGFGPVFKGK 70
N ++++G +E +++ A+ ++ F +E+ T + F LG G FG V K
Sbjct: 3 NAAAAKKGSEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVK 62
Query: 71 L-DDGREIAVKKLSHSSNQGKKEFE---NEAKLLARVQHRNVVNLLGYCAHGAEKLLIYE 126
+ G A+K L K+ E NE ++L V +V L + ++ E
Sbjct: 63 HKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 122
Query: 127 YV----INESLDKV-----------------LFSLIKDIQILFRKKKTDIKASNILLDDK 165
YV + L ++ F + + +++R D+K N+L+D +
Sbjct: 123 YVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR----DLKPENLLIDQQ 178
Query: 166 WIPKIADFGMARLFPEDQTHVNTR---VAGTNGYMAPEYVMHGHLSVKADVFSFGVVILE 222
++ DFG A+ V R + GT Y+APE ++ + D ++ GV+I E
Sbjct: 179 GYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
Query: 223 LISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGL 279
+ +G F D Q +Y+K S ++ PS +SD D + +Q+ L
Sbjct: 232 MAAGY--PPFFADQPIQ--------IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 278
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 99/205 (48%), Gaps = 36/205 (17%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 24 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 79
Query: 106 RNVVNLLG---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQI 146
NV+ LL H GA+ ++ + + ++ + +++ +++ ++
Sbjct: 80 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 139
Query: 147 LFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQT-HVNTRVAGTNGYMAPEYVM 203
+ D+K SN+ +++ KI DFG+AR ++ T +V TR Y APE ++
Sbjct: 140 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 194
Query: 204 HG-HLSVKADVFSFGVVILELISGQ 227
+ H + D++S G ++ EL++G+
Sbjct: 195 NWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 99/205 (48%), Gaps = 36/205 (17%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 106 RNVVNLLG---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQI 146
NV+ LL H GA+ ++ + + ++ + +++ +++ ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKY 140
Query: 147 LFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQT-HVNTRVAGTNGYMAPEYVM 203
+ D+K SN+ +++ KI DFG+AR ++ T +V TR Y APE ++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 195
Query: 204 HG-HLSVKADVFSFGVVILELISGQ 227
+ H + D++S G ++ EL++G+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 99/205 (48%), Gaps = 36/205 (17%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 23 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 78
Query: 106 RNVVNLLG---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQI 146
NV+ LL H GA+ ++ + + ++ + +++ +++ ++
Sbjct: 79 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 138
Query: 147 LFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQT-HVNTRVAGTNGYMAPEYVM 203
+ D+K SN+ +++ KI DFG+AR ++ T +V TR Y APE ++
Sbjct: 139 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 193
Query: 204 HG-HLSVKADVFSFGVVILELISGQ 227
+ H + D++S G ++ EL++G+
Sbjct: 194 NWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 99/205 (48%), Gaps = 36/205 (17%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 106 RNVVNLLG---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQI 146
NV+ LL H GA+ ++ + + ++ + +++ +++ ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 147 LFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQT-HVNTRVAGTNGYMAPEYVM 203
+ D+K SN+ +++ KI DFG+AR ++ T +V TR Y APE ++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 195
Query: 204 HG-HLSVKADVFSFGVVILELISGQ 227
+ H + D++S G ++ EL++G+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 99/205 (48%), Gaps = 36/205 (17%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 106 RNVVNLLG---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQI 146
NV+ LL H GA+ ++ + + ++ + +++ +++ ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 147 LFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQT-HVNTRVAGTNGYMAPEYVM 203
+ D+K SN+ +++ KI DFG+AR ++ T +V TR Y APE ++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 195
Query: 204 HG-HLSVKADVFSFGVVILELISGQ 227
+ H + D++S G ++ EL++G+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 99/205 (48%), Gaps = 36/205 (17%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 48 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 103
Query: 106 RNVVNLLG---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQI 146
NV+ LL H GA+ ++ + + ++ + +++ +++ ++
Sbjct: 104 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 163
Query: 147 LFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQT-HVNTRVAGTNGYMAPEYVM 203
+ D+K SN+ +++ KI DFG+AR ++ T +V TR Y APE ++
Sbjct: 164 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 218
Query: 204 HG-HLSVKADVFSFGVVILELISGQ 227
+ H + D++S G ++ EL++G+
Sbjct: 219 NWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 99/205 (48%), Gaps = 36/205 (17%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 30 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 85
Query: 106 RNVVNLLG---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQI 146
NV+ LL H GA+ ++ + + ++ + +++ +++ ++
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 145
Query: 147 LFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQT-HVNTRVAGTNGYMAPEYVM 203
+ D+K SN+ +++ KI DFG+AR ++ T +V TR Y APE ++
Sbjct: 146 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 200
Query: 204 HG-HLSVKADVFSFGVVILELISGQ 227
+ H + D++S G ++ EL++G+
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 97/207 (46%), Gaps = 40/207 (19%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 30 QNLSP---IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 85
Query: 106 RNVVNLLG---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQI 146
NV+ LL H GA+ ++ + + ++ + +++ +++ ++
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 145
Query: 147 LFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAG---TNGYMAPEY 201
+ D+K SN+ +++ KI DFG+AR H + + G T Y APE
Sbjct: 146 IHSADIIHRDLKPSNLAVNEDXELKILDFGLAR-------HTDDEMTGYVATRWYRAPEI 198
Query: 202 VMHG-HLSVKADVFSFGVVILELISGQ 227
+++ H + D++S G ++ EL++G+
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 97/207 (46%), Gaps = 40/207 (19%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 106 RNVVNLLG---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQI 146
NV+ LL H GA+ ++ + + ++ + +++ +++ ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 147 LFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAG---TNGYMAPEY 201
+ D+K SN+ +++ KI DFG+AR H + + G T Y APE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGXVATRWYRAPEI 193
Query: 202 VMHG-HLSVKADVFSFGVVILELISGQ 227
+++ H + D++S G ++ EL++G+
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 125/297 (42%), Gaps = 54/297 (18%)
Query: 16 NLGSSREGDNEEDLEKIAAREQKHF--PFEALVSATKN---FHPSNKLGEGGFGPVFKGK 70
N ++++G +E +++ A+ ++ F +E+ T + F LG G FG V K
Sbjct: 3 NAAAAKKGSEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVK 62
Query: 71 L-DDGREIAVKKLSHSSNQGKKEFE---NEAKLLARVQHRNVVNLLGYCAHGAEKLLIYE 126
+ G A+K L K+ E NE ++L V +V L + ++ E
Sbjct: 63 HKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 122
Query: 127 YV----INESLDKV-----------------LFSLIKDIQILFRKKKTDIKASNILLDDK 165
YV + L ++ F + + +++R D+K N+L+D +
Sbjct: 123 YVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR----DLKPENLLIDQQ 178
Query: 166 WIPKIADFGMARLFPEDQTHVNTR---VAGTNGYMAPEYVMHGHLSVKADVFSFGVVILE 222
++ DFG A+ V R + GT Y+APE ++ + D ++ GV+I E
Sbjct: 179 GYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
Query: 223 LISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGL 279
+ +G F D Q +Y+K S ++ PS +SD D + +Q+ L
Sbjct: 232 MAAGY--PPFFADQPIQ--------IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 278
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 99/205 (48%), Gaps = 36/205 (17%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 21 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 76
Query: 106 RNVVNLLG---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQI 146
NV+ LL H GA+ ++ + + ++ + +++ +++ ++
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 136
Query: 147 LFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQT-HVNTRVAGTNGYMAPEYVM 203
+ D+K SN+ +++ KI DFG+AR ++ T +V TR Y APE ++
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 191
Query: 204 HG-HLSVKADVFSFGVVILELISGQ 227
+ H + D++S G ++ EL++G+
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 101/260 (38%), Gaps = 39/260 (15%)
Query: 58 LGEGGFGPVFKGKLDDGREIAVKKLSHSS----NQGKKEFENEAKLLARVQHRNVVNLLG 113
LG+GGF F+ D +E+ K+ S +++ E + + H++VV G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 114 YCAHGAEKLLIYEYVINESLDKV---------------LFSLIKDIQILFRKK--KTDIK 156
+ ++ E SL ++ L ++ Q L R + D+K
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 168
Query: 157 ASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSF 216
N+ L++ KI DFG+A D + GT Y+APE + S + DV+S
Sbjct: 169 LGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKGHSFEVDVWSI 227
Query: 217 GVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQ 276
G ++ L+ G+ F + L Y K + V SL IQ
Sbjct: 228 GCIMYTLLVGK--PPFETSCLKETYLRIKKNEYSIPKHINPVAASL------------IQ 273
Query: 277 IGLLCTQGDPQLRPTMRRVV 296
L Q DP RPT+ ++
Sbjct: 274 KML---QTDPTARPTINELL 290
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 99/205 (48%), Gaps = 36/205 (17%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 22 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 77
Query: 106 RNVVNLLG---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQI 146
NV+ LL H GA+ ++ + + ++ + +++ +++ ++
Sbjct: 78 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 137
Query: 147 LFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQT-HVNTRVAGTNGYMAPEYVM 203
+ D+K SN+ +++ KI DFG+AR ++ T +V TR Y APE ++
Sbjct: 138 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 192
Query: 204 HG-HLSVKADVFSFGVVILELISGQ 227
+ H + D++S G ++ EL++G+
Sbjct: 193 NWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 86/189 (45%), Gaps = 22/189 (11%)
Query: 58 LGEGGFGPVFKGKL----DDGREIAVKKLSH-SSNQGKKEFENEAKLLARVQHRNVVNLL 112
+GEG FG V +G + +A+K + +S+ +++F EA + + H ++V L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 113 GYCAHGAEKLLIYEYVINE----------SLDK---VLFSLIKDIQILFRKKKT----DI 155
G +++ + E SLD +L++ + + + K DI
Sbjct: 458 GVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDI 517
Query: 156 KASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFS 215
A N+L+ K+ DFG++R + + ++ +MAPE + + +DV+
Sbjct: 518 AARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWM 577
Query: 216 FGVVILELI 224
FGV + E++
Sbjct: 578 FGVCMWEIL 586
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 99/205 (48%), Gaps = 36/205 (17%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 36 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 91
Query: 106 RNVVNLLG---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQI 146
NV+ LL H GA+ ++ + + ++ + +++ +++ ++
Sbjct: 92 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 151
Query: 147 LFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQT-HVNTRVAGTNGYMAPEYVM 203
+ D+K SN+ +++ KI DFG+AR ++ T +V TR Y APE ++
Sbjct: 152 IHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 206
Query: 204 HG-HLSVKADVFSFGVVILELISGQ 227
+ H + D++S G ++ EL++G+
Sbjct: 207 NWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 96/197 (48%), Gaps = 33/197 (16%)
Query: 58 LGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQHRNVVNLLG 113
+G G +G V G +AVKKLS S K+ + E +LL ++H NV+ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 94
Query: 114 ---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQILFRKK--K 152
H GA+ ++ + + ++ + +++ +++ ++ +
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 154
Query: 153 TDIKASNILLDDKWIPKIADFGMARLFPEDQT-HVNTRVAGTNGYMAPEYVMHG-HLSVK 210
D+K SN+ +++ KI DFG+AR ++ T +V TR Y APE +++ H +
Sbjct: 155 RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQT 209
Query: 211 ADVFSFGVVILELISGQ 227
D++S G ++ EL++G+
Sbjct: 210 VDIWSVGCIMAELLTGR 226
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 123/297 (41%), Gaps = 54/297 (18%)
Query: 16 NLGSSREGDNEEDLEKIAAREQKHF--PFEALVSATKN---FHPSNKLGEGGFGPVFKGK 70
N ++++G +E +++ A+ ++ F +E+ T + F LG G FG V K
Sbjct: 23 NAAAAKKGSEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVK 82
Query: 71 L-DDGREIAVKKLSHSSNQGKKEFE---NEAKLLARVQHRNVVNLLGYCAHGAEKLLIYE 126
+ G A+K L K+ E NE ++L V +V L + ++ E
Sbjct: 83 HKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 142
Query: 127 YVINESLDKVL---------------------FSLIKDIQILFRKKKTDIKASNILLDDK 165
YV + L F + + +++R D+K N+L+D +
Sbjct: 143 YVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR----DLKPENLLIDQQ 198
Query: 166 WIPKIADFGMARLFPEDQTHVNTR---VAGTNGYMAPEYVMHGHLSVKADVFSFGVVILE 222
++ DFG A+ V R + GT Y+APE ++ + D ++ GV+I E
Sbjct: 199 GYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 251
Query: 223 LISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGL 279
+ +G F D Q +Y+K S ++ PS +SD D + +Q+ L
Sbjct: 252 MAAGY--PPFFADQPIQ--------IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 298
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 99/205 (48%), Gaps = 36/205 (17%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 22 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 77
Query: 106 RNVVNLLG---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQI 146
NV+ LL H GA+ ++ + + ++ + +++ +++ ++
Sbjct: 78 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 137
Query: 147 LFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQT-HVNTRVAGTNGYMAPEYVM 203
+ D+K SN+ +++ KI DFG+AR ++ T +V TR Y APE ++
Sbjct: 138 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 192
Query: 204 HG-HLSVKADVFSFGVVILELISGQ 227
+ H + D++S G ++ EL++G+
Sbjct: 193 NWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 124/297 (41%), Gaps = 54/297 (18%)
Query: 16 NLGSSREGDNEEDLEKIAAREQKHF--PFEALVSATKN---FHPSNKLGEGGFGPVFKGK 70
N ++++G +E +++ A+ ++ F +E T + F LG G FG V K
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVK 61
Query: 71 -LDDGREIAVKKLSHSSNQGKKEFE---NEAKLLARVQHRNVVNLLGYCAHGAEKLLIYE 126
++ G A+K L K+ E NE ++L V +V L + ++ E
Sbjct: 62 HMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 121
Query: 127 YV----INESLDKV-----------------LFSLIKDIQILFRKKKTDIKASNILLDDK 165
Y + L ++ F + + +++R D+K N+++D +
Sbjct: 122 YAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR----DLKPENLMIDQQ 177
Query: 166 WIPKIADFGMARLFPEDQTHVNTR---VAGTNGYMAPEYVMHGHLSVKADVFSFGVVILE 222
K+ DFG A+ V R + GT Y+APE ++ + D ++ GV+I E
Sbjct: 178 GYIKVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 223 LISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGL 279
+ +G F D Q +Y+K S ++ PS +SD D + +Q+ L
Sbjct: 231 MAAGY--PPFFADQPIQ--------IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 39/200 (19%)
Query: 58 LGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGK-----------KEFENEAKLLARVQHR 106
LGEG +G V ++AV +++ + K + + E + + H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 107 NVVNLLGYCAHGAEKLLIYEYVIN-ESLDKVLFSL---IKDIQILFRK------------ 150
NVV G+ G + L EY E D++ + D Q F +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 151 -KKTDIKASNILLDDKWIPKIADFGMARLFP-EDQTHVNTRVAGTNGYMAPEYVMHGHLS 208
DIK N+LLD++ KI+DFG+A +F ++ + ++ GT Y+APE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 209 VK-ADVFSFGVVILELISGQ 227
+ DV+S G+V+ +++G+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGE 204
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 97/207 (46%), Gaps = 40/207 (19%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 48 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 103
Query: 106 RNVVNLLG---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQI 146
NV+ LL H GA+ ++ + + ++ + +++ +++ ++
Sbjct: 104 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 163
Query: 147 LFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAG---TNGYMAPEY 201
+ D+K SN+ +++ KI DFG+AR H + + G T Y APE
Sbjct: 164 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMXGYVATRWYRAPEI 216
Query: 202 VMHG-HLSVKADVFSFGVVILELISGQ 227
+++ H + D++S G ++ EL++G+
Sbjct: 217 MLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 89/203 (43%), Gaps = 41/203 (20%)
Query: 58 LGEGGFGPVFKGKLD-DGREIAVKKLSHSSN--QGKKEFENEAKLLARVQHRNVVNL--- 111
+G G +G V + G+++A+KK+ ++ + K E K+L +H N++ +
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 121
Query: 112 -----------------------LGYCAHGAEKLLIYEYVINESLDKVLFSLIKDIQILF 148
L H ++ L + E + L+ L++ ++ +
Sbjct: 122 LRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTL------EHVRYFLYQLLRGLKYMH 175
Query: 149 RKK--KTDIKASNILLDDKWIPKIADFGMARLF---PEDQTHVNTRVAGTNGYMAPEYVM 203
+ D+K SN+L+++ KI DFGMAR P + + T T Y APE ++
Sbjct: 176 SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELML 235
Query: 204 HGHLSVKA-DVFSFGVVILELIS 225
H +A D++S G + E+++
Sbjct: 236 SLHEYTQAIDLWSVGCIFGEMLA 258
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 97/207 (46%), Gaps = 40/207 (19%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 106 RNVVNLLG---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQI 146
NV+ LL H GA+ ++ + + ++ + +++ +++ ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKY 140
Query: 147 LFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAG---TNGYMAPEY 201
+ D+K SN+ +++ KI DFG+AR H + + G T Y APE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDXELKILDFGLAR-------HTDDEMTGYVATRWYRAPEI 193
Query: 202 VMHG-HLSVKADVFSFGVVILELISGQ 227
+++ H + D++S G ++ EL++G+
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 96/199 (48%), Gaps = 37/199 (18%)
Query: 58 LGEGGFGPVFKGKLDDGR---EIAVKKLS---HSSNQGKKEFENEAKLLARVQHRNVVNL 111
+G G +G V D R ++AVKKLS S ++ + E +LL ++H NV+ L
Sbjct: 28 VGSGAYGSVCSAY--DARLRQKVAVKKLSRPFQSLIHARRTY-RELRLLKHLKHENVIGL 84
Query: 112 LGY-----------------CAHGAE--KLLIYEYVINESLDKVLFSLIKDIQILFRKK- 151
L GA+ ++ + + +E + +++ L++ ++ +
Sbjct: 85 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAGI 144
Query: 152 -KTDIKASNILLDDKWIPKIADFGMARLFPEDQT-HVNTRVAGTNGYMAPEYVMHG-HLS 208
D+K SN+ +++ +I DFG+AR E+ T +V TR Y APE +++ H +
Sbjct: 145 IHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATR-----WYRAPEIMLNWMHYN 199
Query: 209 VKADVFSFGVVILELISGQ 227
D++S G ++ EL+ G+
Sbjct: 200 QTVDIWSVGCIMAELLQGK 218
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 101/260 (38%), Gaps = 39/260 (15%)
Query: 58 LGEGGFGPVFKGKLDDGREIAVKKLSHSS----NQGKKEFENEAKLLARVQHRNVVNLLG 113
LG+GGF F+ D +E+ K+ S +++ E + + H++VV G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 114 YCAHGAEKLLIYEYVINESLDKV---------------LFSLIKDIQILFRKK--KTDIK 156
+ ++ E SL ++ L ++ Q L R + D+K
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 166
Query: 157 ASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSF 216
N+ L++ KI DFG+A D + GT Y+APE + S + DV+S
Sbjct: 167 LGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKGHSFEVDVWSI 225
Query: 217 GVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQ 276
G ++ L+ G+ F + L Y K + V SL IQ
Sbjct: 226 GCIMYTLLVGK--PPFETSCLKETYLRIKKNEYSIPKHINPVAASL------------IQ 271
Query: 277 IGLLCTQGDPQLRPTMRRVV 296
L Q DP RPT+ ++
Sbjct: 272 KML---QTDPTARPTINELL 288
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 99/205 (48%), Gaps = 36/205 (17%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 30 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 85
Query: 106 RNVVNLLG---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQI 146
NV+ LL H GA+ ++ + + ++ + +++ +++ ++
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 145
Query: 147 LFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQT-HVNTRVAGTNGYMAPEYVM 203
+ D+K SN+ +++ KI DFG+AR ++ T +V TR Y APE ++
Sbjct: 146 IHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 200
Query: 204 HG-HLSVKADVFSFGVVILELISGQ 227
+ H + D++S G ++ EL++G+
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 103/227 (45%), Gaps = 38/227 (16%)
Query: 31 KIAAREQKHFPFEALVSATKNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLSHSSNQG 89
K+ ++H+ F A ++ ++G G +G V K G+ +AVK++ + ++
Sbjct: 8 KLKISPEQHWDFTA-----EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEK 62
Query: 90 -KKEFENEAKLLAR-------VQHRNVVNLLGYCAHGAEKLL-----IYEYVIN------ 130
+K+ + ++ R VQ + G C E + Y+YV +
Sbjct: 63 EQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVI 122
Query: 131 --ESLDKVLFSLIKDIQILFRKKKT---DIKASNILLDDKWIPKIADFGMARLFPEDQTH 185
E L K+ + +K + L K DIK SNILLD K+ DFG++ + +
Sbjct: 123 PEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVD--SI 180
Query: 186 VNTRVAGTNGYMAPEYV-----MHGHLSVKADVFSFGVVILELISGQ 227
TR AG YMAPE + G+ V++DV+S G+ + EL +G+
Sbjct: 181 AKTRDAGCRPYMAPERIDPSASRQGY-DVRSDVWSLGITLYELATGR 226
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 125/297 (42%), Gaps = 54/297 (18%)
Query: 16 NLGSSREGDNEEDLEKIAAREQKHF--PFEALVSATKN---FHPSNKLGEGGFGPVFKGK 70
N ++++G +E +++ A+ ++ F +E+ T + F LG G FG V K
Sbjct: 3 NAAAAKKGXEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVK 62
Query: 71 L-DDGREIAVKKLSHSSNQGKKEFE---NEAKLLARVQHRNVVNLLGYCAHGAEKLLIYE 126
+ G A+K L K+ E NE ++L V +V L + ++ E
Sbjct: 63 HKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 122
Query: 127 YV----INESLDKV-----------------LFSLIKDIQILFRKKKTDIKASNILLDDK 165
YV + L ++ F + + +++R D+K N+L+D +
Sbjct: 123 YVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR----DLKPENLLIDQQ 178
Query: 166 WIPKIADFGMARLFPEDQTHVNTR---VAGTNGYMAPEYVMHGHLSVKADVFSFGVVILE 222
++ DFG A+ V R + GT Y+APE ++ + D ++ GV+I E
Sbjct: 179 GYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
Query: 223 LISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGL 279
+ +G F D Q +Y+K S ++ PS +SD D + +Q+ L
Sbjct: 232 MAAGY--PPFFADQPIQ--------IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 278
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 124/297 (41%), Gaps = 54/297 (18%)
Query: 16 NLGSSREGDNEEDLEKIAAREQKHF--PFEALVSATKN---FHPSNKLGEGGFGPVFKGK 70
N ++++G +E +++ A+ ++ F +E T + F LG G FG V K
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVK 61
Query: 71 -LDDGREIAVKKLSHSSNQGKKEFE---NEAKLLARVQHRNVVNLLGYCAHGAEKLLIYE 126
++ G A+K L K+ E NE ++L V +V L + ++ E
Sbjct: 62 HMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 121
Query: 127 YV----INESLDKV-----------------LFSLIKDIQILFRKKKTDIKASNILLDDK 165
Y + L ++ F + + +++R D+K N+++D +
Sbjct: 122 YAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR----DLKPENLMIDQQ 177
Query: 166 WIPKIADFGMARLFPEDQTHVNTR---VAGTNGYMAPEYVMHGHLSVKADVFSFGVVILE 222
K+ DFG A+ V R + GT Y+APE ++ + D ++ GV+I E
Sbjct: 178 GYIKVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 223 LISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGL 279
+ +G F D Q +Y+K S ++ PS +SD D + +Q+ L
Sbjct: 231 MAAGY--PPFFADQPIQ--------IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 99/205 (48%), Gaps = 36/205 (17%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 27 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 82
Query: 106 RNVVNLLG---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQI 146
NV+ LL H GA+ ++ + + ++ + +++ +++ ++
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 142
Query: 147 LFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQT-HVNTRVAGTNGYMAPEYVM 203
+ D+K SN+ +++ KI DFG+AR ++ T +V TR Y APE ++
Sbjct: 143 IHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 197
Query: 204 HG-HLSVKADVFSFGVVILELISGQ 227
+ H + D++S G ++ EL++G+
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 39/200 (19%)
Query: 58 LGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGK-----------KEFENEAKLLARVQHR 106
LGEG +G V ++AV +++ + K + + E + + H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 107 NVVNLLGYCAHGAEKLLIYEYVIN-ESLDKVLFSL---IKDIQILFRK------------ 150
NVV G+ G + L EY E D++ + D Q F +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 151 -KKTDIKASNILLDDKWIPKIADFGMARLFP-EDQTHVNTRVAGTNGYMAPEYVMHGHLS 208
DIK N+LLD++ KI+DFG+A +F ++ + ++ GT Y+APE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 209 VK-ADVFSFGVVILELISGQ 227
+ DV+S G+V+ +++G+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGE 204
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 124/297 (41%), Gaps = 54/297 (18%)
Query: 16 NLGSSREGDNEEDLEKIAAREQKHF--PFEALVSATKN---FHPSNKLGEGGFGPVFKGK 70
N ++++G +E +++ A+ ++ F +E T + F LG G FG V K
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVK 61
Query: 71 L-DDGREIAVKKLSHSSNQGKKEFE---NEAKLLARVQHRNVVNLLGYCAHGAEKLLIYE 126
+ G A+K L K+ E NE ++L V +V L + ++ E
Sbjct: 62 HKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVME 121
Query: 127 YV----INESLDKV-----------------LFSLIKDIQILFRKKKTDIKASNILLDDK 165
YV + L ++ F + + +++R D+K N+L+D +
Sbjct: 122 YVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR----DLKPENLLIDQQ 177
Query: 166 WIPKIADFGMARLFPEDQTHVNTR---VAGTNGYMAPEYVMHGHLSVKADVFSFGVVILE 222
++ DFG A+ V R + GT Y+APE ++ + D ++ GV+I E
Sbjct: 178 GYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 223 LISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGL 279
+ +G F D Q +Y+K S ++ PS +SD D + +Q+ L
Sbjct: 231 MAAGY--PPFFADQPIQ--------IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 39/200 (19%)
Query: 58 LGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGK-----------KEFENEAKLLARVQHR 106
LGEG +G V ++AV +++ + K + + E + + H
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 107 NVVNLLGYCAHGAEKLLIYEYVIN-ESLDKVLFSL---IKDIQILFRK------------ 150
NVV G+ G + L EY E D++ + D Q F +
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 151 -KKTDIKASNILLDDKWIPKIADFGMARLFP-EDQTHVNTRVAGTNGYMAPEYVMHGHLS 208
DIK N+LLD++ KI+DFG+A +F ++ + ++ GT Y+APE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 209 VK-ADVFSFGVVILELISGQ 227
+ DV+S G+V+ +++G+
Sbjct: 186 AEPVDVWSCGIVLTAMLAGE 205
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 99/205 (48%), Gaps = 36/205 (17%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 31 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 86
Query: 106 RNVVNLLG---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQI 146
NV+ LL H GA+ ++ + + ++ + +++ +++ ++
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 146
Query: 147 LFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQT-HVNTRVAGTNGYMAPEYVM 203
+ D+K SN+ +++ KI DFG+AR ++ T +V TR Y APE ++
Sbjct: 147 IHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 201
Query: 204 HG-HLSVKADVFSFGVVILELISGQ 227
+ H + D++S G ++ EL++G+
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 123/298 (41%), Gaps = 56/298 (18%)
Query: 16 NLGSSREGDNEEDLEKIAAREQKHFPFEALVSATKN------FHPSNKLGEGGFGPVFKG 69
N ++++G +E +++ A+ ++ F + + ++N F LG G FG V
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDF-LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLV 60
Query: 70 KL-DDGREIAVKKLSHSSNQGKKEFE---NEAKLLARVQHRNVVNLLGYCAHGAEKLLIY 125
K + G A+K L K+ E NE ++L V +V L + ++
Sbjct: 61 KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 126 EYVINESLDKVL---------------------FSLIKDIQILFRKKKTDIKASNILLDD 164
EYV + L F + + +++R D+K N+L+D
Sbjct: 121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR----DLKPENLLIDQ 176
Query: 165 KWIPKIADFGMARLFPEDQTHVNTR---VAGTNGYMAPEYVMHGHLSVKADVFSFGVVIL 221
+ ++ DFG A+ V R + GT Y+APE ++ + D ++ GV+I
Sbjct: 177 QGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 222 ELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGL 279
E+ +G F D Q +Y+K S ++ PS +SD D + +Q+ L
Sbjct: 230 EMAAGY--PPFFADQPIQ--------IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 122/297 (41%), Gaps = 54/297 (18%)
Query: 16 NLGSSREGDNEEDLEKIAAREQKHF--PFEALVSATKN---FHPSNKLGEGGFGPVFKGK 70
N ++++G +E +++ A+ ++ F +E T + F LG G FG V K
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVK 61
Query: 71 L-DDGREIAVKKLSHSSNQGKKEFE---NEAKLLARVQHRNVVNLLGYCAHGAEKLLIYE 126
+ G A+K L K+ E NE ++L V +V L + ++ E
Sbjct: 62 HKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVME 121
Query: 127 YVINESLDKVL---------------------FSLIKDIQILFRKKKTDIKASNILLDDK 165
YV + L F + + +++R D+K N+L+D +
Sbjct: 122 YVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR----DLKPENLLIDQQ 177
Query: 166 WIPKIADFGMARLFPEDQTHVNTR---VAGTNGYMAPEYVMHGHLSVKADVFSFGVVILE 222
++ DFG A+ V R + GT Y+APE ++ + D ++ GV+I E
Sbjct: 178 GYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 223 LISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGL 279
+ +G F D Q +Y+K S ++ PS +SD D + +Q+ L
Sbjct: 231 MAAGY--PPFFADQPIQ--------IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 39/200 (19%)
Query: 58 LGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGK-----------KEFENEAKLLARVQHR 106
LGEG +G V ++AV +++ + K + + E + + H
Sbjct: 13 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 63
Query: 107 NVVNLLGYCAHGAEKLLIYEYVIN-ESLDKVLFSL---IKDIQILFRK------------ 150
NVV G+ G + L EY E D++ + D Q F +
Sbjct: 64 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 123
Query: 151 -KKTDIKASNILLDDKWIPKIADFGMARLFP-EDQTHVNTRVAGTNGYMAPEYVMHGHLS 208
DIK N+LLD++ KI+DFG+A +F ++ + ++ GT Y+APE +
Sbjct: 124 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 183
Query: 209 VK-ADVFSFGVVILELISGQ 227
+ DV+S G+V+ +++G+
Sbjct: 184 AEPVDVWSCGIVLTAMLAGE 203
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 101/260 (38%), Gaps = 39/260 (15%)
Query: 58 LGEGGFGPVFKGKLDDGREIAVKKLSHSS----NQGKKEFENEAKLLARVQHRNVVNLLG 113
LG+GGF F+ D +E+ K+ S +++ E + + H++VV G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 114 YCAHGAEKLLIYEYVINESLDKV---------------LFSLIKDIQILFRKK--KTDIK 156
+ ++ E SL ++ L ++ Q L R + D+K
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 142
Query: 157 ASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSF 216
N+ L++ KI DFG+A D + GT Y+APE + S + DV+S
Sbjct: 143 LGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKGHSFEVDVWSI 201
Query: 217 GVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQ 276
G ++ L+ G+ F + L Y K + V SL IQ
Sbjct: 202 GCIMYTLLVGK--PPFETSCLKETYLRIKKNEYSIPKHINPVAASL------------IQ 247
Query: 277 IGLLCTQGDPQLRPTMRRVV 296
L Q DP RPT+ ++
Sbjct: 248 KML---QTDPTARPTINELL 264
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 86/199 (43%), Gaps = 31/199 (15%)
Query: 58 LGEGGFGPVFKGK-LDDGREIAVKKLSHSSNQGKK---EFENEAKLLARVQHRNVVNLLG 113
LG GG V + L R++AVK L + F EA+ A + H +V +
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV-- 77
Query: 114 YCAHGAEK------LLIYEYVINESLDKVLFS-----------LIKD-IQILFRKKKT-- 153
Y AE ++ EYV +L ++ + +I D Q L +
Sbjct: 78 YATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGI 137
Query: 154 ---DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVA--GTNGYMAPEYVMHGHLS 208
D+K +NI++ K+ DFG+AR + V A GT Y++PE +
Sbjct: 138 IHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVD 197
Query: 209 VKADVFSFGVVILELISGQ 227
++DV+S G V+ E+++G+
Sbjct: 198 ARSDVYSLGCVLYEVLTGE 216
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 92/212 (43%), Gaps = 29/212 (13%)
Query: 51 NFHPSNKLGEGGFGPV-FKGKLDDGREIAVKKLSHS--SNQGKKEFENEAKLLARVQHRN 107
N+ +G+G F V + GRE+A+K + + + ++ E +++ + H N
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 72
Query: 108 VVNLLGYCAHGAEKLLIYEYVINESLDKVLFS---------------LIKDIQILFRKK- 151
+V L LI EY + L + ++ +Q +K+
Sbjct: 73 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRI 132
Query: 152 -KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPE-YVMHGHLSV 209
D+KA N+LLD KIADFG + F ++T G+ Y APE + +
Sbjct: 133 VHRDLKAENLLLDADMNIKIADFGFSNEFTVG-GKLDT-FCGSPPYAAPELFQGKKYDGP 190
Query: 210 KADVFSFGVVILELISGQRNSSFNLDVDAQNL 241
+ DV+S GV++ L+SG +L D QNL
Sbjct: 191 EVDVWSLGVILYTLVSG------SLPFDGQNL 216
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 125/304 (41%), Gaps = 56/304 (18%)
Query: 16 NLGSSREGDNEEDLEKIAAREQKHFPFEALVSATKN------FHPSNKLGEGGFGPVFKG 69
N ++++G +E +++ A+ ++ F + + ++N F LG G FG V
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDF-LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLV 60
Query: 70 KL-DDGREIAVKKLSHSSNQGKKEFE---NEAKLLARVQHRNVVNLLGYCAHGAEKLLIY 125
K + G A+K L K+ E NE ++L V +V L + ++
Sbjct: 61 KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 126 EYVINESLDKVL---------------------FSLIKDIQILFRKKKTDIKASNILLDD 164
EYV + L F + + +++R D+K N+L+D
Sbjct: 121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR----DLKPENLLIDQ 176
Query: 165 KWIPKIADFGMARLFPEDQTHVNTR---VAGTNGYMAPEYVMHGHLSVKADVFSFGVVIL 221
+ ++ DFG A+ V R + GT Y+APE ++ + D ++ GV+I
Sbjct: 177 QGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 222 ELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGLLC 281
E+ +G F D Q +Y+K S ++ PS +SD D + +Q+ L
Sbjct: 230 EMAAGY--PPFFADQPIQ--------IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTK 279
Query: 282 TQGD 285
G+
Sbjct: 280 AFGN 283
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 39/200 (19%)
Query: 58 LGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGK-----------KEFENEAKLLARVQHR 106
LGEG +G V ++AV +++ + K + + E + + H
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 107 NVVNLLGYCAHGAEKLLIYEYVIN-ESLDKVLFSL---IKDIQILFRK------------ 150
NVV G+ G + L EY E D++ + D Q F +
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 151 -KKTDIKASNILLDDKWIPKIADFGMARLFP-EDQTHVNTRVAGTNGYMAPEYVMHGHLS 208
DIK N+LLD++ KI+DFG+A +F ++ + ++ GT Y+APE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 209 VK-ADVFSFGVVILELISGQ 227
+ DV+S G+V+ +++G+
Sbjct: 186 AEPVDVWSCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 39/200 (19%)
Query: 58 LGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGK-----------KEFENEAKLLARVQHR 106
LGEG +G V ++AV +++ + K + + E + + H
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 107 NVVNLLGYCAHGAEKLLIYEYVIN-ESLDKVLFSL---IKDIQILFRK------------ 150
NVV G+ G + L EY E D++ + D Q F +
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 151 -KKTDIKASNILLDDKWIPKIADFGMARLFP-EDQTHVNTRVAGTNGYMAPEYVMHGHLS 208
DIK N+LLD++ KI+DFG+A +F ++ + ++ GT Y+APE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 209 VK-ADVFSFGVVILELISGQ 227
+ DV+S G+V+ +++G+
Sbjct: 186 AEPVDVWSCGIVLTAMLAGE 205
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 39/200 (19%)
Query: 58 LGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGK-----------KEFENEAKLLARVQHR 106
LGEG +G V ++AV +++ + K + + E + + H
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 107 NVVNLLGYCAHGAEKLLIYEYVIN-ESLDKVLFSL---IKDIQILFRK------------ 150
NVV G+ G + L EY E D++ + D Q F +
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 151 -KKTDIKASNILLDDKWIPKIADFGMARLFP-EDQTHVNTRVAGTNGYMAPEYVMHGHLS 208
DIK N+LLD++ KI+DFG+A +F ++ + ++ GT Y+APE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 209 VK-ADVFSFGVVILELISGQ 227
+ DV+S G+V+ +++G+
Sbjct: 186 AEPVDVWSCGIVLTAMLAGE 205
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 26/193 (13%)
Query: 58 LGEGGFGPVFKGK-LDDGREIAVKKLS--HSSNQGKKEF-ENEAKLLARVQHRNVVNL-- 111
LGEG F V + L RE A+K L H + K + E +++R+ H V L
Sbjct: 18 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 77
Query: 112 -----------LGYCAHGAEKLLIYEYVI---NESLDKVLFS-LIKDIQILFRKK--KTD 154
L Y +G +LL Y I +E+ + + ++ ++ L K D
Sbjct: 78 TFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 135
Query: 155 IKASNILLDDKWIPKIADFGMARLF-PEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADV 213
+K NILL++ +I DFG A++ PE + GT Y++PE + +D+
Sbjct: 136 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDL 195
Query: 214 FSFGVVILELISG 226
++ G +I +L++G
Sbjct: 196 WALGCIIYQLVAG 208
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 39/200 (19%)
Query: 58 LGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGK-----------KEFENEAKLLARVQHR 106
LGEG +G V ++AV +++ + K + + E + + H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 107 NVVNLLGYCAHGAEKLLIYEYVIN-ESLDKVLFSL---IKDIQILFRK------------ 150
NVV G+ G + L EY E D++ + D Q F +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 151 -KKTDIKASNILLDDKWIPKIADFGMARLFP-EDQTHVNTRVAGTNGYMAPEYVMHGHLS 208
DIK N+LLD++ KI+DFG+A +F ++ + ++ GT Y+APE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 209 VK-ADVFSFGVVILELISGQ 227
+ DV+S G+V+ +++G+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGE 204
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 39/200 (19%)
Query: 58 LGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGK-----------KEFENEAKLLARVQHR 106
LGEG +G V ++AV +++ + K + + E + + H
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 107 NVVNLLGYCAHGAEKLLIYEYVIN-ESLDKVLFSL---IKDIQILFRK------------ 150
NVV G+ G + L EY E D++ + D Q F +
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 151 -KKTDIKASNILLDDKWIPKIADFGMARLFP-EDQTHVNTRVAGTNGYMAPEYVMHGHLS 208
DIK N+LLD++ KI+DFG+A +F ++ + ++ GT Y+APE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 209 VK-ADVFSFGVVILELISGQ 227
+ DV+S G+V+ +++G+
Sbjct: 186 AEPVDVWSCGIVLTAMLAGE 205
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 124/297 (41%), Gaps = 54/297 (18%)
Query: 16 NLGSSREGDNEEDLEKIAAREQKHF--PFEALVSATKN---FHPSNKLGEGGFGPVFKGK 70
N ++++G +E +++ A+ ++ F +E T + F LG G FG V K
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVK 61
Query: 71 L-DDGREIAVKKLSHSSNQGKKEFE---NEAKLLARVQHRNVVNLLGYCAHGAEKLLIYE 126
+ G A+K L K+ E NE ++L V +V L + ++ E
Sbjct: 62 HKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVME 121
Query: 127 YV----INESLDKV-----------------LFSLIKDIQILFRKKKTDIKASNILLDDK 165
YV + L ++ F + + +++R D+K N+L+D +
Sbjct: 122 YVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR----DLKPENLLIDQQ 177
Query: 166 WIPKIADFGMARLFPEDQTHVNTR---VAGTNGYMAPEYVMHGHLSVKADVFSFGVVILE 222
++ DFG A+ V R + GT Y+APE ++ + D ++ GV+I E
Sbjct: 178 GYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 223 LISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGL 279
+ +G F D Q +Y+K S ++ PS +SD D + +Q+ L
Sbjct: 231 MAAGY--PPFFADQPIQ--------IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 26/193 (13%)
Query: 58 LGEGGFGPVFKGK-LDDGREIAVKKLS--HSSNQGKKEF-ENEAKLLARVQHRNVVNL-- 111
LGEG F V + L RE A+K L H + K + E +++R+ H V L
Sbjct: 17 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 76
Query: 112 -----------LGYCAHGAEKLLIYEYVI---NESLDKVLFS-LIKDIQILFRKK--KTD 154
L Y +G +LL Y I +E+ + + ++ ++ L K D
Sbjct: 77 TFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 134
Query: 155 IKASNILLDDKWIPKIADFGMARLF-PEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADV 213
+K NILL++ +I DFG A++ PE + GT Y++PE + +D+
Sbjct: 135 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDL 194
Query: 214 FSFGVVILELISG 226
++ G +I +L++G
Sbjct: 195 WALGCIIYQLVAG 207
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 26/201 (12%)
Query: 50 KNFHPSNKLGEGGFGPVFKGK-LDDGREIAVKKLS--HSSNQGKKEF-ENEAKLLARVQH 105
++F LGEG F V + L RE A+K L H + K + E +++R+ H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 106 RNVVNL-------------LGYCAHGAEKLLIYEYVI---NESLDKVLFS-LIKDIQILF 148
V L L Y +G +LL Y I +E+ + + ++ ++ L
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 150
Query: 149 RKK--KTDIKASNILLDDKWIPKIADFGMARLF-PEDQTHVNTRVAGTNGYMAPEYVMHG 205
K D+K NILL++ +I DFG A++ PE + GT Y++PE +
Sbjct: 151 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 210
Query: 206 HLSVKADVFSFGVVILELISG 226
+D+++ G +I +L++G
Sbjct: 211 SACKSSDLWALGCIIYQLVAG 231
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 121/295 (41%), Gaps = 50/295 (16%)
Query: 16 NLGSSREGDNEEDLEKIAAREQKHFPFEALVSATKN------FHPSNKLGEGGFGPVFKG 69
N ++++G +E +++ A+ ++ F + + ++N F LG G FG V
Sbjct: 23 NAAAAKKGSEQESVKEFLAKAKEDF-LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLV 81
Query: 70 KL-DDGREIAVKKLSHSSNQGKKEFE---NEAKLLARVQHRNVVNLLGYCAHGAEKLLIY 125
K + G A+K L K+ E NE ++L V +V L + ++
Sbjct: 82 KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 141
Query: 126 EYVINESLDKVL---------------------FSLIKDIQILFRKKKTDIKASNILLDD 164
EYV + L F + + +++R D+K N+L+D
Sbjct: 142 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR----DLKPENLLIDQ 197
Query: 165 KWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVVILELI 224
+ ++ DFG A+ + GT Y+APE ++ + D ++ GV+I E+
Sbjct: 198 QGYIQVTDFGFAKRV----KGATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 253
Query: 225 SGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGL 279
+G F D Q +Y+K S ++ PS +SD D + +Q+ L
Sbjct: 254 AGY--PPFFADQPIQ--------IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 298
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 39/200 (19%)
Query: 58 LGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGK-----------KEFENEAKLLARVQHR 106
LGEG +G V ++AV +++ + K + + E + + H
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 65
Query: 107 NVVNLLGYCAHGAEKLLIYEYVIN-ESLDKVLFSL---IKDIQILFRK------------ 150
NVV G+ G + L EY E D++ + D Q F +
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 151 -KKTDIKASNILLDDKWIPKIADFGMARLFP-EDQTHVNTRVAGTNGYMAPEYVMHGHLS 208
DIK N+LLD++ KI+DFG+A +F ++ + ++ GT Y+APE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 185
Query: 209 VK-ADVFSFGVVILELISGQ 227
+ DV+S G+V+ +++G+
Sbjct: 186 AEPVDVWSCGIVLTAMLAGE 205
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 29/212 (13%)
Query: 51 NFHPSNKLGEGGFGPV-FKGKLDDGREIAVKKLSHS--SNQGKKEFENEAKLLARVQHRN 107
N+ +G+G F V + GRE+AVK + + + ++ E +++ + H N
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 108 VVNLLGYCAHGAEKLLIYEYVINESLDKVLFS---------------LIKDIQILFRKK- 151
+V L L+ EY + L + ++ +Q +K
Sbjct: 76 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYI 135
Query: 152 -KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPE-YVMHGHLSV 209
D+KA N+LLD KIADFG + F ++T G+ Y APE + +
Sbjct: 136 VHRDLKAENLLLDGDMNIKIADFGFSNEFTVG-NKLDT-FCGSPPYAAPELFQGKKYDGP 193
Query: 210 KADVFSFGVVILELISGQRNSSFNLDVDAQNL 241
+ DV+S GV++ L+SG +L D QNL
Sbjct: 194 EVDVWSLGVILYTLVSG------SLPFDGQNL 219
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 92/224 (41%), Gaps = 55/224 (24%)
Query: 51 NFHPSNKLGEGGFGPVFKGK-LDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVV 109
+F LG+G FG V K + D R A+KK+ H+ + +E LLA + H+ VV
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQYVV 65
Query: 110 NL--------------------------LGYCAHGAEKLLIYEYVINESLDKV--LF--- 138
+ YC + LI+ +N+ D+ LF
Sbjct: 66 RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQI 125
Query: 139 ----SLIKDIQILFRKKKTDIKASNILLDDKWIPKIADFGMAR-------LFPEDQTHVN 187
S I I+ R D+K NI +D+ KI DFG+A+ + D ++
Sbjct: 126 LEALSYIHSQGIIHR----DLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLP 181
Query: 188 ------TRVAGTNGYMAPEYV-MHGHLSVKADVFSFGVVILELI 224
T GT Y+A E + GH + K D++S G++ E+I
Sbjct: 182 GSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 39/200 (19%)
Query: 58 LGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGK-----------KEFENEAKLLARVQHR 106
LGEG +G V ++AV +++ + K + + E + + H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 107 NVVNLLGYCAHGAEKLLIYEYVIN-ESLDKVLFSL---IKDIQILFRK------------ 150
NVV G+ G + L EY E D++ + D Q F +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 151 -KKTDIKASNILLDDKWIPKIADFGMARLFP-EDQTHVNTRVAGTNGYMAPEYVMHGHLS 208
DIK N+LLD++ KI+DFG+A +F ++ + ++ GT Y+APE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 209 VK-ADVFSFGVVILELISGQ 227
+ DV+S G+V+ +++G+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGE 204
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 123/298 (41%), Gaps = 56/298 (18%)
Query: 16 NLGSSREGDNEEDLEKIAAREQKHFPFEALVSATKN------FHPSNKLGEGGFGPVFKG 69
N ++++G +E +++ A+ ++ F + + ++N F LG G FG V
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDF-LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLV 60
Query: 70 KL-DDGREIAVKKLSHSSNQGKKEFE---NEAKLLARVQHRNVVNLLGYCAHGAEKLLIY 125
K + G A+K L K+ E NE ++L V +V L + ++
Sbjct: 61 KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 126 EYVINESLDKVL---------------------FSLIKDIQILFRKKKTDIKASNILLDD 164
EYV + L F + + +++R D+K N+L+D
Sbjct: 121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR----DLKPENLLIDQ 176
Query: 165 KWIPKIADFGMARLFPEDQTHVNTR---VAGTNGYMAPEYVMHGHLSVKADVFSFGVVIL 221
+ ++ DFG A+ V R + GT Y+APE ++ + D ++ GV+I
Sbjct: 177 QGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 222 ELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGL 279
E+ +G F D Q +Y+K S ++ PS +SD D + +Q+ L
Sbjct: 230 EMAAGY--PPFFADQPIQ--------IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 123/298 (41%), Gaps = 56/298 (18%)
Query: 16 NLGSSREGDNEEDLEKIAAREQKHFPFEALVSATKN------FHPSNKLGEGGFGPVFKG 69
N ++++G +E +++ A+ ++ F + + ++N F LG G FG V
Sbjct: 23 NAAAAKKGSEQESVKEFLAKAKEDF-LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLV 81
Query: 70 KL-DDGREIAVKKLSHSSNQGKKEFE---NEAKLLARVQHRNVVNLLGYCAHGAEKLLIY 125
K + G A+K L K+ E NE ++L V +V L + ++
Sbjct: 82 KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 141
Query: 126 EYVINESLDKVL---------------------FSLIKDIQILFRKKKTDIKASNILLDD 164
EYV + L F + + +++R D+K N+L+D
Sbjct: 142 EYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR----DLKPENLLIDQ 197
Query: 165 KWIPKIADFGMARLFPEDQTHVNTR---VAGTNGYMAPEYVMHGHLSVKADVFSFGVVIL 221
+ ++ DFG A+ V R + GT Y+APE ++ + D ++ GV+I
Sbjct: 198 QGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 250
Query: 222 ELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGL 279
E+ +G F D Q +Y+K S ++ PS +SD D + +Q+ L
Sbjct: 251 EMAAGY--PPFFADQPIQ--------IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 298
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 123/298 (41%), Gaps = 56/298 (18%)
Query: 16 NLGSSREGDNEEDLEKIAAREQKHFPFEALVSATKN------FHPSNKLGEGGFGPVFKG 69
N ++++G +E +++ A+ ++ F + + ++N F LG G FG V
Sbjct: 3 NAAAAKKGSEQESVKEFLAKAKEDF-LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLV 61
Query: 70 KL-DDGREIAVKKLSHSSNQGKKEFE---NEAKLLARVQHRNVVNLLGYCAHGAEKLLIY 125
K + G A+K L K+ E NE ++L V +V L + ++
Sbjct: 62 KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 121
Query: 126 EYVINESLDKVL---------------------FSLIKDIQILFRKKKTDIKASNILLDD 164
EYV + L F + + +++R D+K N+L+D
Sbjct: 122 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR----DLKPENLLIDQ 177
Query: 165 KWIPKIADFGMARLFPEDQTHVNTR---VAGTNGYMAPEYVMHGHLSVKADVFSFGVVIL 221
+ ++ DFG A+ V R + GT Y+APE ++ + D ++ GV+I
Sbjct: 178 QGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 230
Query: 222 ELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGL 279
E+ +G F D Q +Y+K S ++ PS +SD D + +Q+ L
Sbjct: 231 EMAAGY--PPFFADQPIQ--------IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 278
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 39/200 (19%)
Query: 58 LGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGK-----------KEFENEAKLLARVQHR 106
LGEG +G V ++AV +++ + K + + E + + H
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 107 NVVNLLGYCAHGAEKLLIYEYVIN-ESLDKVLFSL---IKDIQILFRK------------ 150
NVV G+ G + L EY E D++ + D Q F +
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 151 -KKTDIKASNILLDDKWIPKIADFGMARLFP-EDQTHVNTRVAGTNGYMAPEYVMHGHLS 208
DIK N+LLD++ KI+DFG+A +F ++ + ++ GT Y+APE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 209 VK-ADVFSFGVVILELISGQ 227
+ DV+S G+V+ +++G+
Sbjct: 186 AEPVDVWSCGIVLTAMLAGE 205
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 39/200 (19%)
Query: 58 LGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGK-----------KEFENEAKLLARVQHR 106
LGEG +G V ++AV +++ + K + + E + + H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 107 NVVNLLGYCAHGAEKLLIYEYVIN-ESLDKVLFSL---IKDIQILFRK------------ 150
NVV G+ G + L EY E D++ + D Q F +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 151 -KKTDIKASNILLDDKWIPKIADFGMARLFP-EDQTHVNTRVAGTNGYMAPEYVMHGHLS 208
DIK N+LLD++ KI+DFG+A +F ++ + ++ GT Y+APE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 209 VK-ADVFSFGVVILELISGQ 227
+ DV+S G+V+ +++G+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGE 204
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 26/201 (12%)
Query: 50 KNFHPSNKLGEGGFGPVFKGK-LDDGREIAVKKLS--HSSNQGKKEF-ENEAKLLARVQH 105
++F LGEG F V + L RE A+K L H + K + E +++R+ H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 106 RNVVNL-------------LGYCAHGAEKLLIYEYVI---NESLDKVLFS-LIKDIQILF 148
V L L Y +G +LL Y I +E+ + + ++ ++ L
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 150
Query: 149 RKK--KTDIKASNILLDDKWIPKIADFGMARLF-PEDQTHVNTRVAGTNGYMAPEYVMHG 205
K D+K NILL++ +I DFG A++ PE + GT Y++PE +
Sbjct: 151 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 210
Query: 206 HLSVKADVFSFGVVILELISG 226
+D+++ G +I +L++G
Sbjct: 211 SACKSSDLWALGCIIYQLVAG 231
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 123/298 (41%), Gaps = 56/298 (18%)
Query: 16 NLGSSREGDNEEDLEKIAAREQKHFPFEALVSATKN------FHPSNKLGEGGFGPVFKG 69
N ++++G +E +++ A+ ++ F + + ++N F LG G FG V
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDF-LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLV 60
Query: 70 KL-DDGREIAVKKLSHSSNQGKKEFE---NEAKLLARVQHRNVVNLLGYCAHGAEKLLIY 125
K + G A+K L K+ E NE ++L V +V L + ++
Sbjct: 61 KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 126 EYVINESLDKVL---------------------FSLIKDIQILFRKKKTDIKASNILLDD 164
EYV + L F + + +++R D+K N+L+D
Sbjct: 121 EYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR----DLKPENLLIDQ 176
Query: 165 KWIPKIADFGMARLFPEDQTHVNTR---VAGTNGYMAPEYVMHGHLSVKADVFSFGVVIL 221
+ ++ DFG A+ V R + GT Y+APE ++ + D ++ GV+I
Sbjct: 177 QGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 222 ELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGL 279
E+ +G F D Q +Y+K S ++ PS +SD D + +Q+ L
Sbjct: 230 EMAAGY--PPFFADQPIQ--------IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 26/193 (13%)
Query: 58 LGEGGFGPVFKGK-LDDGREIAVKKLS--HSSNQGKKEF-ENEAKLLARVQHRNVVNL-- 111
LGEG F V + L RE A+K L H + K + E +++R+ H V L
Sbjct: 15 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 74
Query: 112 -----------LGYCAHGAEKLLIYEYVI---NESLDKVLFS-LIKDIQILFRKK--KTD 154
L Y +G +LL Y I +E+ + + ++ ++ L K D
Sbjct: 75 TFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 132
Query: 155 IKASNILLDDKWIPKIADFGMARLF-PEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADV 213
+K NILL++ +I DFG A++ PE + GT Y++PE + +D+
Sbjct: 133 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDL 192
Query: 214 FSFGVVILELISG 226
++ G +I +L++G
Sbjct: 193 WALGCIIYQLVAG 205
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 39/200 (19%)
Query: 58 LGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGK-----------KEFENEAKLLARVQHR 106
LGEG +G V ++AV +++ + K + + E + + H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 107 NVVNLLGYCAHGAEKLLIYEYVIN-ESLDKVLFSL---IKDIQILFRK------------ 150
NVV G+ G + L EY E D++ + D Q F +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 151 -KKTDIKASNILLDDKWIPKIADFGMARLFP-EDQTHVNTRVAGTNGYMAPEYVMHGHLS 208
DIK N+LLD++ KI+DFG+A +F ++ + ++ GT Y+APE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 209 VK-ADVFSFGVVILELISGQ 227
+ DV+S G+V+ +++G+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGE 204
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 26/201 (12%)
Query: 50 KNFHPSNKLGEGGFGPVFKGK-LDDGREIAVKKLS--HSSNQGKKEF-ENEAKLLARVQH 105
++F LGEG F V + L RE A+K L H + K + E +++R+ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 106 RNVVNL-------------LGYCAHGAEKLLIYEYVI---NESLDKVLFS-LIKDIQILF 148
V L L Y +G +LL Y I +E+ + + ++ ++ L
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 149 RKK--KTDIKASNILLDDKWIPKIADFGMARLF-PEDQTHVNTRVAGTNGYMAPEYVMHG 205
K D+K NILL++ +I DFG A++ PE + GT Y++PE +
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 206 HLSVKADVFSFGVVILELISG 226
+D+++ G +I +L++G
Sbjct: 210 SACKSSDLWALGCIIYQLVAG 230
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 96/199 (48%), Gaps = 37/199 (18%)
Query: 58 LGEGGFGPVFKGKLDDGR---EIAVKKLS---HSSNQGKKEFENEAKLLARVQHRNVVNL 111
+G G +G V D R ++AVKKLS S ++ + E +LL ++H NV+ L
Sbjct: 36 VGSGAYGSVCSAY--DARLRQKVAVKKLSRPFQSLIHARRTY-RELRLLKHLKHENVIGL 92
Query: 112 LGY-----------------CAHGAE--KLLIYEYVINESLDKVLFSLIKDIQILFRKK- 151
L GA+ ++ + + +E + +++ L++ ++ +
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAGI 152
Query: 152 -KTDIKASNILLDDKWIPKIADFGMARLFPEDQT-HVNTRVAGTNGYMAPEYVMHG-HLS 208
D+K SN+ +++ +I DFG+AR E+ T +V TR Y APE +++ H +
Sbjct: 153 IHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WYRAPEIMLNWMHYN 207
Query: 209 VKADVFSFGVVILELISGQ 227
D++S G ++ EL+ G+
Sbjct: 208 QTVDIWSVGCIMAELLQGK 226
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 26/193 (13%)
Query: 58 LGEGGFGPVFKGK-LDDGREIAVKKLS--HSSNQGKKEF-ENEAKLLARVQHRNVVNL-- 111
LGEG F V + L RE A+K L H + K + E +++R+ H V L
Sbjct: 16 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 75
Query: 112 -----------LGYCAHGAEKLLIYEYVI---NESLDKVLFS-LIKDIQILFRKK--KTD 154
L Y +G +LL Y I +E+ + + ++ ++ L K D
Sbjct: 76 TFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 133
Query: 155 IKASNILLDDKWIPKIADFGMARLF-PEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADV 213
+K NILL++ +I DFG A++ PE + GT Y++PE + +D+
Sbjct: 134 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDL 193
Query: 214 FSFGVVILELISG 226
++ G +I +L++G
Sbjct: 194 WALGCIIYQLVAG 206
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 96/199 (48%), Gaps = 37/199 (18%)
Query: 58 LGEGGFGPVFKGKLDDGR---EIAVKKLS---HSSNQGKKEFENEAKLLARVQHRNVVNL 111
+G G +G V D R ++AVKKLS S ++ + E +LL ++H NV+ L
Sbjct: 36 VGSGAYGSVCSAY--DARLRQKVAVKKLSRPFQSLIHARRTY-RELRLLKHLKHENVIGL 92
Query: 112 LGY-----------------CAHGAE--KLLIYEYVINESLDKVLFSLIKDIQILFRKK- 151
L GA+ ++ + + +E + +++ L++ ++ +
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSAGI 152
Query: 152 -KTDIKASNILLDDKWIPKIADFGMARLFPEDQT-HVNTRVAGTNGYMAPEYVMHG-HLS 208
D+K SN+ +++ +I DFG+AR E+ T +V TR Y APE +++ H +
Sbjct: 153 IHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WYRAPEIMLNWMHYN 207
Query: 209 VKADVFSFGVVILELISGQ 227
D++S G ++ EL+ G+
Sbjct: 208 QTVDIWSVGCIMAELLQGK 226
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 39/200 (19%)
Query: 58 LGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGK-----------KEFENEAKLLARVQHR 106
LGEG +G V ++AV +++ + K + + E + + H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 107 NVVNLLGYCAHGAEKLLIYEYVIN-ESLDKVLFSL---IKDIQILFRK------------ 150
NVV G+ G + L EY E D++ + D Q F +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 151 -KKTDIKASNILLDDKWIPKIADFGMARLFP-EDQTHVNTRVAGTNGYMAPEYVMHGHLS 208
DIK N+LLD++ KI+DFG+A +F ++ + ++ GT Y+APE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 209 VK-ADVFSFGVVILELISGQ 227
+ DV+S G+V+ +++G+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGE 204
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 26/201 (12%)
Query: 50 KNFHPSNKLGEGGFGPVFKGK-LDDGREIAVKKLS--HSSNQGKKEF-ENEAKLLARVQH 105
++F LGEG F V + L RE A+K L H + K + E +++R+ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 106 RNVVNL-------------LGYCAHGAEKLLIYEYVI---NESLDKVLFS-LIKDIQILF 148
V L L Y +G +LL Y I +E+ + + ++ ++ L
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 149 RKK--KTDIKASNILLDDKWIPKIADFGMARLF-PEDQTHVNTRVAGTNGYMAPEYVMHG 205
K D+K NILL++ +I DFG A++ PE + GT Y++PE +
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 206 HLSVKADVFSFGVVILELISG 226
+D+++ G +I +L++G
Sbjct: 210 SACKSSDLWALGCIIYQLVAG 230
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 26/201 (12%)
Query: 50 KNFHPSNKLGEGGFGPVFKGK-LDDGREIAVKKLS--HSSNQGKKEF-ENEAKLLARVQH 105
++F LGEG F V + L RE A+K L H + K + E +++R+ H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 106 RNVVNL-------------LGYCAHGAEKLLIYEYVI---NESLDKVLFS-LIKDIQILF 148
V L L Y +G +LL Y I +E+ + + ++ ++ L
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 147
Query: 149 RKK--KTDIKASNILLDDKWIPKIADFGMARLF-PEDQTHVNTRVAGTNGYMAPEYVMHG 205
K D+K NILL++ +I DFG A++ PE + GT Y++PE +
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 206 HLSVKADVFSFGVVILELISG 226
+D+++ G +I +L++G
Sbjct: 208 SACKSSDLWALGCIIYQLVAG 228
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 39/200 (19%)
Query: 58 LGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGK-----------KEFENEAKLLARVQHR 106
LGEG +G V ++AV +++ + K + + E + + H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 107 NVVNLLGYCAHGAEKLLIYEYVIN-ESLDKVLFSL---IKDIQILFRK------------ 150
NVV G+ G + L EY E D++ + D Q F +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 151 -KKTDIKASNILLDDKWIPKIADFGMARLFP-EDQTHVNTRVAGTNGYMAPEYVMHGHLS 208
DIK N+LLD++ KI+DFG+A +F ++ + ++ GT Y+APE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 209 VK-ADVFSFGVVILELISGQ 227
+ DV+S G+V+ +++G+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGE 204
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 99/205 (48%), Gaps = 36/205 (17%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 106 RNVVNLLG---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQI 146
NV+ LL H GA+ ++ + + ++ + +++ +++ ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 147 LFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQT-HVNTRVAGTNGYMAPEYVM 203
+ D+K SN+ +++ KI D+G+AR ++ T +V TR Y APE ++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATR-----WYRAPEIML 195
Query: 204 HG-HLSVKADVFSFGVVILELISGQ 227
+ H + D++S G ++ EL++G+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 26/201 (12%)
Query: 50 KNFHPSNKLGEGGFGPVFKGK-LDDGREIAVKKLS--HSSNQGKKEF-ENEAKLLARVQH 105
++F LGEG F V + L RE A+K L H + K + E +++R+ H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 106 RNVVNL-------------LGYCAHGAEKLLIYEYVI---NESLDKVLFS-LIKDIQILF 148
V L L Y +G +LL Y I +E+ + + ++ ++ L
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 147
Query: 149 RKK--KTDIKASNILLDDKWIPKIADFGMARLF-PEDQTHVNTRVAGTNGYMAPEYVMHG 205
K D+K NILL++ +I DFG A++ PE + GT Y++PE +
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEK 207
Query: 206 HLSVKADVFSFGVVILELISG 226
+D+++ G +I +L++G
Sbjct: 208 SACKSSDLWALGCIIYQLVAG 228
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 86/200 (43%), Gaps = 34/200 (17%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKL-DDGREIAVKKLSHSSNQGKKEFENEAKLLARV----- 103
++F ++LG G +G VFK + +DGR AVK+ S S +G K + A+ LA V
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKR-SMSPFRGPK---DRARKLAEVGSHEK 112
Query: 104 --QHRNVVNLLGYCAHGAEKLLIYEYVINESL------------DKVLFSLIKDIQILFR 149
QH V L G L E + SL + ++ ++D +
Sbjct: 113 VGQHPCCVRLEQAWEEGGILYLQTE-LCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALA 171
Query: 150 KKKT------DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVM 203
+ D+K +NI L + K+ DFG+ L G YMAPE ++
Sbjct: 172 HLHSQGLVHLDVKPANIFLGPRGRCKLGDFGL--LVELGTAGAGEVQEGDPRYMAPE-LL 228
Query: 204 HGHLSVKADVFSFGVVILEL 223
G ADVFS G+ ILE+
Sbjct: 229 QGSYGTAADVFSLGLTILEV 248
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 91/198 (45%), Gaps = 34/198 (17%)
Query: 56 NKLGEGGFGPVFKGKLD-DGREIAVKKLSHSSNQG-------KKEFENEAKLLARVQHRN 107
+ LG G FG V GK + G ++AVK L+ + ++E +N L +H +
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQN----LKLFRHPH 77
Query: 108 VVNLLGYCAHGAEKLLIYEYV--------------INESLDKVLFS-LIKDIQILFRKK- 151
++ L + ++ ++ EYV ++E + LF ++ + R
Sbjct: 78 IIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMV 137
Query: 152 -KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSV- 209
D+K N+LLD KIADFG++ + + + + G+ Y APE V+ G L
Sbjct: 138 VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXS--CGSPNYAAPE-VISGRLYAG 194
Query: 210 -KADVFSFGVVILELISG 226
+ D++S GV++ L+ G
Sbjct: 195 PEVDIWSSGVILYALLCG 212
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 26/201 (12%)
Query: 50 KNFHPSNKLGEGGFGPVFKGK-LDDGREIAVKKLS--HSSNQGKKEF-ENEAKLLARVQH 105
++F LGEG F V + L RE A+K L H + K + E +++R+ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 106 RNVVNL-------------LGYCAHGAEKLLIYEYVI---NESLDKVLFS-LIKDIQILF 148
V L L Y +G +LL Y I +E+ + + ++ ++ L
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 149 RKK--KTDIKASNILLDDKWIPKIADFGMARLF-PEDQTHVNTRVAGTNGYMAPEYVMHG 205
K D+K NILL++ +I DFG A++ PE + GT Y++PE +
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 206 HLSVKADVFSFGVVILELISG 226
+D+++ G +I +L++G
Sbjct: 210 SACKSSDLWALGCIIYQLVAG 230
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 26/201 (12%)
Query: 50 KNFHPSNKLGEGGFGPVFKGK-LDDGREIAVKKLS--HSSNQGKKEF-ENEAKLLARVQH 105
++F LGEG F V + L RE A+K L H + K + E +++R+ H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 106 RNVVNL-------------LGYCAHGAEKLLIYEYVI---NESLDKVLFS-LIKDIQILF 148
V L L Y +G +LL Y I +E+ + + ++ ++ L
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 152
Query: 149 RKK--KTDIKASNILLDDKWIPKIADFGMARLF-PEDQTHVNTRVAGTNGYMAPEYVMHG 205
K D+K NILL++ +I DFG A++ PE + GT Y++PE +
Sbjct: 153 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 212
Query: 206 HLSVKADVFSFGVVILELISG 226
+D+++ G +I +L++G
Sbjct: 213 SACKSSDLWALGCIIYQLVAG 233
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 26/201 (12%)
Query: 50 KNFHPSNKLGEGGFGPVFKGK-LDDGREIAVKKLS--HSSNQGKKEF-ENEAKLLARVQH 105
++F LGEG F V + L RE A+K L H + K + E +++R+ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 106 RNVVNL-------------LGYCAHGAEKLLIYEYVI---NESLDKVLFS-LIKDIQILF 148
V L L Y +G +LL Y I +E+ + + ++ ++ L
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 149 RKK--KTDIKASNILLDDKWIPKIADFGMARLF-PEDQTHVNTRVAGTNGYMAPEYVMHG 205
K D+K NILL++ +I DFG A++ PE + GT Y++PE +
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 206 HLSVKADVFSFGVVILELISG 226
+D+++ G +I +L++G
Sbjct: 210 SACKSSDLWALGCIIYQLVAG 230
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 84/197 (42%), Gaps = 27/197 (13%)
Query: 58 LGEGGFGPVFKGK-LDDGREIAVKKLSHSSNQGKK---EFENEAKLLARVQHRNVVNLL- 112
LG GG V + L R++AVK L + F EA+ A + H +V +
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 113 ---GYCAHGAEKLLIYEYVINESLDKVLFS-----------LIKD-IQILFRKKKT---- 153
G ++ EYV +L ++ + +I D Q L +
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIH 139
Query: 154 -DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVA--GTNGYMAPEYVMHGHLSVK 210
D+K +NI++ K+ DFG+AR + V A GT Y++PE + +
Sbjct: 140 RDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDAR 199
Query: 211 ADVFSFGVVILELISGQ 227
+DV+S G V+ E+++G+
Sbjct: 200 SDVYSLGCVLYEVLTGE 216
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 26/201 (12%)
Query: 50 KNFHPSNKLGEGGFGPVFKGK-LDDGREIAVKKLS--HSSNQGKKEF-ENEAKLLARVQH 105
++F LGEG F V + L RE A+K L H + K + E +++R+ H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 106 RNVVNL-------------LGYCAHGAEKLLIYEYVI---NESLDKVLFS-LIKDIQILF 148
V L L Y +G +LL Y I +E+ + + ++ ++ L
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 147
Query: 149 RKK--KTDIKASNILLDDKWIPKIADFGMARLF-PEDQTHVNTRVAGTNGYMAPEYVMHG 205
K D+K NILL++ +I DFG A++ PE + GT Y++PE +
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 206 HLSVKADVFSFGVVILELISG 226
+D+++ G +I +L++G
Sbjct: 208 SACKSSDLWALGCIIYQLVAG 228
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 124/297 (41%), Gaps = 54/297 (18%)
Query: 16 NLGSSREGDNEEDLEKIAAREQKHF--PFEALVSATKN---FHPSNKLGEGGFGPVFKGK 70
N ++++G +E +++ A+ ++ F +E+ T + F LG G FG V K
Sbjct: 3 NAAAAKKGSEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVK 62
Query: 71 L-DDGREIAVKKLSHSSNQGKKEFE---NEAKLLARVQHRNVVNLLGYCAHGAEKLLIYE 126
+ G A+K L K+ E NE ++L V +V L + ++ E
Sbjct: 63 HKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 122
Query: 127 YV----INESLDKV-----------------LFSLIKDIQILFRKKKTDIKASNILLDDK 165
Y + L ++ F + + +++R D+K N+++D +
Sbjct: 123 YAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR----DLKPENLMIDQQ 178
Query: 166 WIPKIADFGMARLFPEDQTHVNTR---VAGTNGYMAPEYVMHGHLSVKADVFSFGVVILE 222
K+ DFG A+ V R + GT Y+APE ++ + D ++ GV+I E
Sbjct: 179 GYIKVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
Query: 223 LISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGL 279
+ +G F D Q +Y+K S ++ PS +SD D + +Q+ L
Sbjct: 232 MAAGY--PPFFADQPIQ--------IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 278
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 123/298 (41%), Gaps = 56/298 (18%)
Query: 16 NLGSSREGDNEEDLEKIAAREQKHFPFEALVSATKN------FHPSNKLGEGGFGPVFKG 69
N ++++G +E +++ A+ ++ F + + ++N F LG G FG V
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDF-LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLV 60
Query: 70 KL-DDGREIAVKKLSHSSNQGKKEFE---NEAKLLARVQHRNVVNLLGYCAHGAEKLLIY 125
K + G A+K L K+ E NE ++L V +V L + ++
Sbjct: 61 KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 126 EYVINESLDKVL---------------------FSLIKDIQILFRKKKTDIKASNILLDD 164
EYV + L F + + +++R D+K N+L+D
Sbjct: 121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR----DLKPENLLIDQ 176
Query: 165 KWIPKIADFGMARLFPEDQTHVNTR---VAGTNGYMAPEYVMHGHLSVKADVFSFGVVIL 221
+ ++ DFG A+ V R + GT Y+APE ++ + D ++ GV+I
Sbjct: 177 QGYIQVTDFGFAK-------RVKGRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 222 ELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGL 279
E+ +G F D Q +Y+K S ++ PS +SD D + +Q+ L
Sbjct: 230 EMAAGY--PPFFADQPIQ--------IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 123/298 (41%), Gaps = 56/298 (18%)
Query: 16 NLGSSREGDNEEDLEKIAAREQKHFPFEALVSATKN------FHPSNKLGEGGFGPVFKG 69
N ++++G +E +++ A+ ++ F + + ++N F LG G FG V
Sbjct: 2 NAAAAKKGXEQESVKEFLAKAKEDF-LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLV 60
Query: 70 KL-DDGREIAVKKLSHSSNQGKKEFE---NEAKLLARVQHRNVVNLLGYCAHGAEKLLIY 125
K + G A+K L K+ E NE ++L V +V L + ++
Sbjct: 61 KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 126 EYVINESLDKVL---------------------FSLIKDIQILFRKKKTDIKASNILLDD 164
EYV + L F + + +++R D+K N+L+D
Sbjct: 121 EYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR----DLKPENLLIDQ 176
Query: 165 KWIPKIADFGMARLFPEDQTHVNTR---VAGTNGYMAPEYVMHGHLSVKADVFSFGVVIL 221
+ ++ DFG A+ V R + GT Y+APE ++ + D ++ GV+I
Sbjct: 177 QGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 222 ELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGL 279
E+ +G F D Q +Y+K S ++ PS +SD D + +Q+ L
Sbjct: 230 EMAAGY--PPFFADQPIQ--------IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 39/200 (19%)
Query: 58 LGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGK-----------KEFENEAKLLARVQHR 106
LGEG +G V ++AV +++ + K + + E + + H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 107 NVVNLLGYCAHGAEKLLIYEYVIN-ESLDKVLFSL---IKDIQILFRK------------ 150
NVV G+ G + L EY E D++ + D Q F +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 151 -KKTDIKASNILLDDKWIPKIADFGMARLFP-EDQTHVNTRVAGTNGYMAPEYVMHGHLS 208
DIK N+LLD++ KI+DFG+A +F ++ + ++ GT Y+APE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 209 VK-ADVFSFGVVILELISGQ 227
+ DV+S G+V+ +++G+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGE 204
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 123/298 (41%), Gaps = 56/298 (18%)
Query: 16 NLGSSREGDNEEDLEKIAAREQKHFPFEALVSATKN------FHPSNKLGEGGFGPVFKG 69
N ++++G +E +++ A+ ++ F + + ++N F LG G FG V
Sbjct: 2 NAAAAKKGXEQESVKEFLAKAKEDF-LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLV 60
Query: 70 KL-DDGREIAVKKLSHSSNQGKKEFE---NEAKLLARVQHRNVVNLLGYCAHGAEKLLIY 125
K + G A+K L K+ E NE ++L V +V L + ++
Sbjct: 61 KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 126 EYVINESLDKVL---------------------FSLIKDIQILFRKKKTDIKASNILLDD 164
EYV + L F + + +++R D+K N+L+D
Sbjct: 121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR----DLKPENLLIDQ 176
Query: 165 KWIPKIADFGMARLFPEDQTHVNTR---VAGTNGYMAPEYVMHGHLSVKADVFSFGVVIL 221
+ ++ DFG A+ V R + GT Y+APE ++ + D ++ GV+I
Sbjct: 177 QGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 222 ELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGL 279
E+ +G F D Q +Y+K S ++ PS +SD D + +Q+ L
Sbjct: 230 EMAAGY--PPFFADQPIQ--------IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 94/214 (43%), Gaps = 33/214 (15%)
Query: 51 NFHPSNKLGEGGFGPV-FKGKLDDGREIAVK---KLSHSSNQGKKEFENEAKLLARVQHR 106
N+ +G+G F V + G+E+AVK K +S+ +K F E +++ + H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHP 73
Query: 107 NVVNLLGYCAHGAEKLLIYEYVINESLDKVLFS---------------LIKDIQILFRK- 150
N+V L L+ EY + L + ++ +Q +K
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 151 -KKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHG--HL 207
D+KA N+LLD KIADFG + F ++T G+ Y APE + G +
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFG-NKLDT-FCGSPPYAAPE-LFQGKKYD 190
Query: 208 SVKADVFSFGVVILELISGQRNSSFNLDVDAQNL 241
+ DV+S GV++ L+SG +L D QNL
Sbjct: 191 GPEVDVWSLGVILYTLVSG------SLPFDGQNL 218
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 123/298 (41%), Gaps = 56/298 (18%)
Query: 16 NLGSSREGDNEEDLEKIAAREQKHFPFEALVSATKN------FHPSNKLGEGGFGPVFKG 69
N ++++G +E +++ A+ ++ F + + ++N F LG G FG V
Sbjct: 2 NAAAAKKGXEQESVKEFLAKAKEDF-LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLV 60
Query: 70 KL-DDGREIAVKKLSHSSNQGKKEFE---NEAKLLARVQHRNVVNLLGYCAHGAEKLLIY 125
K + G A+K L K+ E NE ++L V +V L + ++
Sbjct: 61 KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 126 EYVINESLDKVL---------------------FSLIKDIQILFRKKKTDIKASNILLDD 164
EYV + L F + + +++R D+K N+L+D
Sbjct: 121 EYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYR----DLKPENLLIDQ 176
Query: 165 KWIPKIADFGMARLFPEDQTHVNTR---VAGTNGYMAPEYVMHGHLSVKADVFSFGVVIL 221
+ ++ DFG A+ V R + GT Y+APE ++ + D ++ GV+I
Sbjct: 177 QGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 222 ELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGL 279
E+ +G F D Q +Y+K S ++ PS +SD D + +Q+ L
Sbjct: 230 EMAAGY--PPFFADQPIQ--------IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 39/200 (19%)
Query: 58 LGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGK-----------KEFENEAKLLARVQHR 106
LGEG +G V ++AV +++ + K + + E + + H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 107 NVVNLLGYCAHGAEKLLIYEYVIN-ESLDKVLFSL---IKDIQILFRK------------ 150
NVV G+ G + L EY E D++ + D Q F +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 151 -KKTDIKASNILLDDKWIPKIADFGMARLFP-EDQTHVNTRVAGTNGYMAPEYVMHGHLS 208
DIK N+LLD++ KI+DFG+A +F ++ + ++ GT Y+APE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 209 VK-ADVFSFGVVILELISGQ 227
+ DV+S G+V+ +++G+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGE 204
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 26/201 (12%)
Query: 50 KNFHPSNKLGEGGFGPVFKGK-LDDGREIAVKKLS--HSSNQGKKEF-ENEAKLLARVQH 105
++F LGEG F V + L RE A+K L H + K + E +++R+ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 106 RNVVNL-------------LGYCAHGAEKLLIYEYVI---NESLDKVLFS-LIKDIQILF 148
V L L Y +G +LL Y I +E+ + + ++ ++ L
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 149 RKK--KTDIKASNILLDDKWIPKIADFGMARLF-PEDQTHVNTRVAGTNGYMAPEYVMHG 205
K D+K NILL++ +I DFG A++ PE + GT Y++PE +
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 206 HLSVKADVFSFGVVILELISG 226
+D+++ G +I +L++G
Sbjct: 210 SAXKSSDLWALGCIIYQLVAG 230
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 81/192 (42%), Gaps = 23/192 (11%)
Query: 58 LGEGGFGPVFKGKLDDGREI-AVKKLSHSSNQGKKEFEN---EAKLLARVQHRNVVNLLG 113
LG+G FG V + E+ AVK L + E E ++LA + L
Sbjct: 349 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 408
Query: 114 YCAHGAEKL-LIYEYVINESL-------------DKVLFSLIKDIQILFRKKK----TDI 155
C ++L + EYV L V ++ I + F + K D+
Sbjct: 409 SCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDL 468
Query: 156 KASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFS 215
K N++LD + KIADFGM + D GT Y+APE + + D ++
Sbjct: 469 KLDNVMLDSEGHIKIADFGMCKENIWDGV-TTKXFCGTPDYIAPEIIAYQPYGKSVDWWA 527
Query: 216 FGVVILELISGQ 227
FGV++ E+++GQ
Sbjct: 528 FGVLLYEMLAGQ 539
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 94/214 (43%), Gaps = 33/214 (15%)
Query: 51 NFHPSNKLGEGGFGPV-FKGKLDDGREIAVK---KLSHSSNQGKKEFENEAKLLARVQHR 106
N+ +G+G F V + G+E+AVK K +S+ +K F E +++ + H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHP 73
Query: 107 NVVNLLGYCAHGAEKLLIYEYVINESLDKVLFS---------------LIKDIQILFRK- 150
N+V L L+ EY + L + ++ +Q +K
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 151 -KKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHG--HL 207
D+KA N+LLD KIADFG + F ++T G+ Y APE + G +
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFG-NKLDT-FCGSPPYAAPE-LFQGKKYD 190
Query: 208 SVKADVFSFGVVILELISGQRNSSFNLDVDAQNL 241
+ DV+S GV++ L+SG +L D QNL
Sbjct: 191 GPEVDVWSLGVILYTLVSG------SLPFDGQNL 218
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 123/298 (41%), Gaps = 56/298 (18%)
Query: 16 NLGSSREGDNEEDLEKIAAREQKHFPFEALVSATKN------FHPSNKLGEGGFGPVFKG 69
N ++++G +E +++ A+ ++ F + + ++N F LG G FG V
Sbjct: 2 NAAAAKKGXEQESVKEFLAKAKEDF-LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLV 60
Query: 70 KL-DDGREIAVKKLSHSSNQGKKEFE---NEAKLLARVQHRNVVNLLGYCAHGAEKLLIY 125
K + G A+K L K+ E NE ++L V +V L + ++
Sbjct: 61 KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 126 EYVINESLDKVL---------------------FSLIKDIQILFRKKKTDIKASNILLDD 164
EYV + L F + + +++R D+K N+L+D
Sbjct: 121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR----DLKPENLLIDQ 176
Query: 165 KWIPKIADFGMARLFPEDQTHVNTR---VAGTNGYMAPEYVMHGHLSVKADVFSFGVVIL 221
+ ++ DFG A+ V R + GT Y+APE ++ + D ++ GV+I
Sbjct: 177 QGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 222 ELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGL 279
E+ +G F D Q +Y+K S ++ PS +SD D + +Q+ L
Sbjct: 230 EMAAGY--PPFFADEPIQ--------IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 26/201 (12%)
Query: 50 KNFHPSNKLGEGGFGP-VFKGKLDDGREIAVKKLS--HSSNQGKKEF-ENEAKLLARVQH 105
++F LGEG F V +L RE A+K L H + K + E +++R+ H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 106 RNVVNL-------------LGYCAHGAEKLLIYEYVI---NESLDKVLFS-LIKDIQILF 148
V L L Y +G +LL Y I +E+ + + ++ ++ L
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 147
Query: 149 RKK--KTDIKASNILLDDKWIPKIADFGMARLF-PEDQTHVNTRVAGTNGYMAPEYVMHG 205
K D+K NILL++ +I DFG A++ PE + GT Y++PE +
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 206 HLSVKADVFSFGVVILELISG 226
+D+++ G +I +L++G
Sbjct: 208 SACKSSDLWALGCIIYQLVAG 228
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 39/200 (19%)
Query: 58 LGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGK-----------KEFENEAKLLARVQHR 106
LGEG +G V ++AV +++ + K + + E + + H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 107 NVVNLLGYCAHGAEKLLIYEYVIN-ESLDKVLFSL---IKDIQILFRK------------ 150
NVV G+ G + L EY E D++ + D Q F +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 151 -KKTDIKASNILLDDKWIPKIADFGMARLFP-EDQTHVNTRVAGTNGYMAPEYVMHGHLS 208
DIK N+LLD++ KI+DFG+A +F ++ + ++ GT Y+APE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 209 VK-ADVFSFGVVILELISGQ 227
+ DV+S G+V+ +++G+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGE 204
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 26/201 (12%)
Query: 50 KNFHPSNKLGEGGFGPVFKGK-LDDGREIAVKKLS--HSSNQGKKEF-ENEAKLLARVQH 105
++F LGEG F V + L RE A+K L H + K + E +++R+ H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 106 RNVVNL-------------LGYCAHGAEKLLIYEYVI---NESLDKVLFS-LIKDIQILF 148
V L L Y +G +LL Y I +E+ + + ++ ++ L
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 131
Query: 149 RKK--KTDIKASNILLDDKWIPKIADFGMARLF-PEDQTHVNTRVAGTNGYMAPEYVMHG 205
K D+K NILL++ +I DFG A++ PE + GT Y++PE +
Sbjct: 132 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 191
Query: 206 HLSVKADVFSFGVVILELISG 226
+D+++ G +I +L++G
Sbjct: 192 SACKSSDLWALGCIIYQLVAG 212
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 90/215 (41%), Gaps = 35/215 (16%)
Query: 51 NFHPSNKLGEGGFGPV-FKGKLDDGREIAVKKLSHS--SNQGKKEFENEAKLLARVQHRN 107
N+ +G+G F V + GRE+A+K + + + ++ E +++ + H N
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 108 VVNLLGYCAHGAEKLLIYEYVINESLDKVLFS---------------LIKDIQILFRKK- 151
+V L LI EY + L + ++ +Q +K+
Sbjct: 76 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRI 135
Query: 152 -KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRV---AGTNGYMAPEYVM-HGH 206
D+KA N+LLD KIADFG + F V ++ G Y APE +
Sbjct: 136 VHRDLKAENLLLDADMNIKIADFGFSNEFT-----VGGKLDAFCGAPPYAAPELFQGKKY 190
Query: 207 LSVKADVFSFGVVILELISGQRNSSFNLDVDAQNL 241
+ DV+S GV++ L+SG +L D QNL
Sbjct: 191 DGPEVDVWSLGVILYTLVSG------SLPFDGQNL 219
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 124/297 (41%), Gaps = 54/297 (18%)
Query: 16 NLGSSREGDNEEDLEKIAAREQKHF--PFEALVSATKN---FHPSNKLGEGGFGPVFKGK 70
N ++++G +E +++ A+ ++ F +E T + F LG G FG V K
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVK 61
Query: 71 -LDDGREIAVKKLSHSSNQGKKEFE---NEAKLLARVQHRNVVNLLGYCAHGAEKLLIYE 126
++ G A+K L K+ E NE ++L V +V L + ++ E
Sbjct: 62 HMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 121
Query: 127 YV----INESLDKV-----------------LFSLIKDIQILFRKKKTDIKASNILLDDK 165
Y + L ++ F + + +++R D+K N+++D +
Sbjct: 122 YAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR----DLKPENLMIDQQ 177
Query: 166 WIPKIADFGMARLFPEDQTHVNTR---VAGTNGYMAPEYVMHGHLSVKADVFSFGVVILE 222
++ DFG A+ V R + GT Y+APE ++ + D ++ GV+I E
Sbjct: 178 GYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 223 LISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGL 279
+ +G F D Q +Y+K S ++ PS +SD D + +Q+ L
Sbjct: 231 MAAGY--PPFFADQPIQ--------IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 94/214 (43%), Gaps = 33/214 (15%)
Query: 51 NFHPSNKLGEGGFGPV-FKGKLDDGREIAVK---KLSHSSNQGKKEFENEAKLLARVQHR 106
N+ +G+G F V + G+E+AVK K +S+ +K F E +++ + H
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHP 66
Query: 107 NVVNLLGYCAHGAEKLLIYEYVINESLDKVLFS---------------LIKDIQILFRK- 150
N+V L L+ EY + L + ++ +Q +K
Sbjct: 67 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKF 126
Query: 151 -KKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHG--HL 207
D+KA N+LLD KIADFG + F ++T G+ Y APE + G +
Sbjct: 127 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK-LDT-FCGSPPYAAPE-LFQGKKYD 183
Query: 208 SVKADVFSFGVVILELISGQRNSSFNLDVDAQNL 241
+ DV+S GV++ L+SG +L D QNL
Sbjct: 184 GPEVDVWSLGVILYTLVSG------SLPFDGQNL 211
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 26/201 (12%)
Query: 50 KNFHPSNKLGEGGFGPVFKGK-LDDGREIAVKKLS--HSSNQGKKEF-ENEAKLLARVQH 105
++F LGEG F V + L RE A+K L H + K + E +++R+ H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 106 RNVVNL-------------LGYCAHGAEKLLIYEYVI---NESLDKVLFS-LIKDIQILF 148
V L L Y +G +LL Y I +E+ + + ++ ++ L
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 146
Query: 149 RKK--KTDIKASNILLDDKWIPKIADFGMARLF-PEDQTHVNTRVAGTNGYMAPEYVMHG 205
K D+K NILL++ +I DFG A++ PE + GT Y++PE +
Sbjct: 147 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 206
Query: 206 HLSVKADVFSFGVVILELISG 226
+D+++ G +I +L++G
Sbjct: 207 SACKSSDLWALGCIIYQLVAG 227
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 123/297 (41%), Gaps = 54/297 (18%)
Query: 16 NLGSSREGDNEEDLEKIAAREQKHF--PFEALVSATKN---FHPSNKLGEGGFGPVFKGK 70
N ++++G +E +++ A+ ++ F +E T + F LG G FG V K
Sbjct: 3 NAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVK 62
Query: 71 -LDDGREIAVKKLSHSSNQGKKEFE---NEAKLLARVQHRNVVNLLGYCAHGAEKLLIYE 126
++ G A+K L K+ E NE ++L V + L + ++ E
Sbjct: 63 HMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVME 122
Query: 127 YV----INESLDKV-----------------LFSLIKDIQILFRKKKTDIKASNILLDDK 165
Y + L ++ F + + +++R D+K N+++D +
Sbjct: 123 YAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR----DLKPENLMIDQQ 178
Query: 166 WIPKIADFGMARLFPEDQTHVNTR---VAGTNGYMAPEYVMHGHLSVKADVFSFGVVILE 222
K+ DFG A+ V R + GT Y+APE ++ + D ++ GV+I E
Sbjct: 179 GYIKVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
Query: 223 LISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGL 279
+ +G F D Q +Y+K S ++ PS +SD D + +Q+ L
Sbjct: 232 MAAGY--PPFFADQPIQ--------IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 278
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 26/201 (12%)
Query: 50 KNFHPSNKLGEGGFGPVFKGK-LDDGREIAVKKLS--HSSNQGKKEF-ENEAKLLARVQH 105
++F LGEG F V + L RE A+K L H + K + E +++R+ H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 106 RNVVNL-------------LGYCAHGAEKLLIYEYVI---NESLDKVLFS-LIKDIQILF 148
V L L Y +G +LL Y I +E+ + + ++ ++ L
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 146
Query: 149 RKK--KTDIKASNILLDDKWIPKIADFGMARLF-PEDQTHVNTRVAGTNGYMAPEYVMHG 205
K D+K NILL++ +I DFG A++ PE + GT Y++PE +
Sbjct: 147 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 206
Query: 206 HLSVKADVFSFGVVILELISG 226
+D+++ G +I +L++G
Sbjct: 207 SACKSSDLWALGCIIYQLVAG 227
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 154 DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVA--GTNGYMAPEYVMHGHLSVKA 211
D+K +NI++ K+ DFG+AR + V A GT Y++PE + ++
Sbjct: 158 DVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARS 217
Query: 212 DVFSFGVVILELISGQ 227
DV+S G V+ E+++G+
Sbjct: 218 DVYSLGCVLYEVLTGE 233
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 94/216 (43%), Gaps = 37/216 (17%)
Query: 51 NFHPSNKLGEGGFGPV-FKGKLDDGREIAVK---KLSHSSNQGKKEFENEAKLLARVQHR 106
N+ +G+G F V + G+E+AV+ K +S+ +K F E +++ + H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHP 73
Query: 107 NVVNLLGYCAHGAEKLLIYEYV--------------INESLDKVLF-SLIKDIQILFRK- 150
N+V L L+ EY + E + F ++ +Q +K
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 151 -KKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNT--RVAGTNGYMAPEYVMHG-- 205
D+KA N+LLD KIADFG + F T N G+ Y APE + G
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEF----TFGNKLDEFCGSPPYAAPE-LFQGKK 188
Query: 206 HLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNL 241
+ + DV+S GV++ L+SG +L D QNL
Sbjct: 189 YDGPEVDVWSLGVILYTLVSG------SLPFDGQNL 218
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 31/206 (15%)
Query: 47 SATKNFHPSNKLGEGGFGPV---FKGKLDDGREIAVKKLS---HSSNQGKKEFENEAKLL 100
+ K + +G G G V F L G +AVKKLS + K+ + E LL
Sbjct: 21 TVLKRYQQLKPIGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAY-RELVLL 77
Query: 101 ARVQHRNVVNLLGYCA------HGAEKLLIYEY-------VINESLDK-----VLFSLIK 142
V H+N+++LL + L+ E VI+ LD +L+ ++
Sbjct: 78 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLC 137
Query: 143 DIQILFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPE 200
I+ L D+K SNI++ KI DFG+AR + + T T Y APE
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTN--FMMTPYVVTRYYRAPE 195
Query: 201 YVMHGHLSVKADVFSFGVVILELISG 226
++ + D++S G ++ EL+ G
Sbjct: 196 VILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 97/205 (47%), Gaps = 36/205 (17%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 106 RNVVNLLGYC--AHGAEK---LLIYEYVINESLDKVLFS--LIKD-IQILFRKK------ 151
NV+ LL A E+ + + +++ L+ ++ S L D +Q L +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKY 140
Query: 152 -------KTDIKASNILLDDKWIPKIADFGMARLFPEDQT-HVNTRVAGTNGYMAPEYVM 203
D+K SN+ +++ KI DFG+ R ++ T +V TR Y APE ++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATR-----WYRAPEIML 195
Query: 204 HG-HLSVKADVFSFGVVILELISGQ 227
+ H + D++S G ++ EL++G+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 123/297 (41%), Gaps = 54/297 (18%)
Query: 16 NLGSSREGDNEEDLEKIAAREQKHF--PFEALVSATKN---FHPSNKLGEGGFGPVFKGK 70
N ++++G +E +++ A+ ++ F +E T + F LG G FG V K
Sbjct: 3 NAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVK 62
Query: 71 -LDDGREIAVKKLSHSSNQGKKEFE---NEAKLLARVQHRNVVNLLGYCAHGAEKLLIYE 126
++ G A+K L K+ E NE ++L V + L + ++ E
Sbjct: 63 HMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVME 122
Query: 127 YV----INESLDKV-----------------LFSLIKDIQILFRKKKTDIKASNILLDDK 165
Y + L ++ F + + +++R D+K N+++D +
Sbjct: 123 YAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR----DLKPENLMIDQQ 178
Query: 166 WIPKIADFGMARLFPEDQTHVNTR---VAGTNGYMAPEYVMHGHLSVKADVFSFGVVILE 222
K+ DFG A+ V R + GT Y+APE ++ + D ++ GV+I E
Sbjct: 179 GYIKVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
Query: 223 LISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGL 279
+ +G F D Q +Y+K S ++ PS +SD D + +Q+ L
Sbjct: 232 MAAGY--PPFFADQPIQ--------IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 278
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 90/205 (43%), Gaps = 28/205 (13%)
Query: 47 SATKNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLSHS--SNQGKKEFENEAKLLARV 103
S T + +G+G F V + KL G E A K ++ S + ++ E EA++ +
Sbjct: 1 SMTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 104 QHRNVVNLLGYCAHGAEKLLIYEYVI-------------------NESLDKVLFSLIKDI 144
+H N+V L + L+++ V + + ++L +++
Sbjct: 61 KHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCH 120
Query: 145 QILFRKKKTDIKASNILLDDKW---IPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEY 201
Q+ + D+K N+LL K K+ADFG+A DQ AGT GY++PE
Sbjct: 121 QMGVVHR--DLKPENLLLASKCKGAAVKLADFGLAIEVQGDQ-QAWFGFAGTPGYLSPEV 177
Query: 202 VMHGHLSVKADVFSFGVVILELISG 226
+ D+++ GV++ L+ G
Sbjct: 178 LRKEAYGKPVDIWACGVILYILLVG 202
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 28/200 (14%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQHR 106
+N P +G + L+ R +A+KKLS + K+ + E L+ V H+
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHK 83
Query: 107 NVVNLLG-YCAHGAEKLLIYEYVINESLDKVLFSLIKD-----------IQILFRKKKT- 153
N++ LL + + + Y++ E +D L +I+ Q+L K
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLH 143
Query: 154 -------DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
D+K SNI++ KI DFG+AR + + T T Y APE ++
Sbjct: 144 SAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 207 LSVKADVFSFGVVILELISG 226
D++S GV++ E+I G
Sbjct: 202 YKENVDIWSVGVIMGEMIKG 221
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 123/298 (41%), Gaps = 56/298 (18%)
Query: 16 NLGSSREGDNEEDLEKIAAREQKHFPFEALVSATKN------FHPSNKLGEGGFGPVFKG 69
N ++++G +E +++ A+ ++ F + + ++N F LG G FG V
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDF-LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLV 60
Query: 70 KL-DDGREIAVKKLSHSSNQGKKEFE---NEAKLLARVQHRNVVNLLGYCAHGAEKLLIY 125
K + G A+K L K+ E NE ++L V +V L + ++
Sbjct: 61 KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 126 EYVINESLDKVL---------------------FSLIKDIQILFRKKKTDIKASNILLDD 164
EYV + L F + + +++R D+K N+L+D
Sbjct: 121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR----DLKPENLLIDQ 176
Query: 165 KWIPKIADFGMARLFPEDQTHVNTR---VAGTNGYMAPEYVMHGHLSVKADVFSFGVVIL 221
+ ++ DFG A+ V R + GT Y+APE ++ + D ++ GV+I
Sbjct: 177 QGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 222 ELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGL 279
++ +G F D Q +Y+K S ++ PS +SD D + +Q+ L
Sbjct: 230 QMAAGY--PPFFADQPIQ--------IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 123/297 (41%), Gaps = 54/297 (18%)
Query: 16 NLGSSREGDNEEDLEKIAAREQKHF--PFEALVSATKN---FHPSNKLGEGGFGPVFKGK 70
N ++++G +E +++ A+ ++ F +E T + F LG G FG V K
Sbjct: 3 NAAAAKKGXEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVK 62
Query: 71 -LDDGREIAVKKLSHSSNQGKKEFE---NEAKLLARVQHRNVVNLLGYCAHGAEKLLIYE 126
++ G A+K L K+ E NE ++L V + L + ++ E
Sbjct: 63 HMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVME 122
Query: 127 YV----INESLDKV-----------------LFSLIKDIQILFRKKKTDIKASNILLDDK 165
Y + L ++ F + + +++R D+K N+++D +
Sbjct: 123 YAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR----DLKPENLMIDQQ 178
Query: 166 WIPKIADFGMARLFPEDQTHVNTR---VAGTNGYMAPEYVMHGHLSVKADVFSFGVVILE 222
K+ DFG A+ V R + GT Y+APE ++ + D ++ GV+I E
Sbjct: 179 GYIKVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
Query: 223 LISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGL 279
+ +G F D Q +Y+K S ++ PS +SD D + +Q+ L
Sbjct: 232 MAAGY--PPFFADQPIQ--------IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 278
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 101/241 (41%), Gaps = 56/241 (23%)
Query: 36 EQKHFPFEALVSATKNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFEN 95
E HF ++ + F K+G+G FG V + D ++ K+ + + + +
Sbjct: 21 EIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKI 80
Query: 96 EAKLLARVQHRNVVNLLGYCAHGAEKLLIYEY--VINESLDKVLFSLI----------KD 143
EA +L ++Q+ ++ N HG K + Y++ +I E L L+ +I +D
Sbjct: 81 EADILKKIQNDDINNNNIVKYHG--KFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIED 138
Query: 144 IQIL----------FRK---KKTDIKASNILLDDKWIPK--------------------- 169
I++ RK TD+K NILLDD + K
Sbjct: 139 IKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKS 198
Query: 170 ----IADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
+ DFG A ++ + + T Y APE +++ V +D++SFG V+ EL +
Sbjct: 199 TGIKLIDFGCATF----KSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYT 254
Query: 226 G 226
G
Sbjct: 255 G 255
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 95/214 (44%), Gaps = 33/214 (15%)
Query: 51 NFHPSNKLGEGGFGPV-FKGKLDDGREIAVK---KLSHSSNQGKKEFENEAKLLARVQHR 106
N+ +G+G F V + G+E+AV+ K +S+ +K F E +++ + H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHP 73
Query: 107 NVVNLLGYCAHGAEKLLIYEYV--------------INESLDKVLF-SLIKDIQILFRK- 150
N+V L L+ EY + E + F ++ +Q +K
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 151 -KKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHG--HL 207
D+KA N+LLD KIADFG + F ++T G+ Y APE + G +
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFG-NKLDT-FCGSPPYAAPE-LFQGKKYD 190
Query: 208 SVKADVFSFGVVILELISGQRNSSFNLDVDAQNL 241
+ DV+S GV++ L+SG +L D QNL
Sbjct: 191 GPEVDVWSLGVILYTLVSG------SLPFDGQNL 218
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 102/226 (45%), Gaps = 49/226 (21%)
Query: 40 FPFEALVSATKNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKL 99
PF + + +G+G +G V++G G +AVK S ++ +K + E +L
Sbjct: 27 LPFLVQRTVARQITLLECVGKGRYGEVWRGSWQ-GENVAVKIFS---SRDEKSWFRETEL 82
Query: 100 LARVQHRNVVNLLGYCA------HGAEKLLI----------YEYVINESLD-----KVLF 138
V R+ N+LG+ A H + +L + Y+Y+ +LD +++
Sbjct: 83 YNTVMLRHE-NILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVL 141
Query: 139 SLIK-----DIQILFRKKK-----TDIKASNILLDDKWIPKIADFGMARLFPEDQTHV-- 186
S+ I+I + K D+K+ NIL+ IAD G+A + + +
Sbjct: 142 SIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDV 201
Query: 187 --NTRVAGTNGYMAPEYVMHGHLSV-------KADVFSFGVVILEL 223
N RV GT YMAPE V+ + V + D+++FG+V+ E+
Sbjct: 202 GNNPRV-GTKRYMAPE-VLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 146 ILFRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHG 205
I++R D+K N++LD + KIADFGM + D GT Y+APE + +
Sbjct: 142 IIYR----DLKLDNVMLDSEGHIKIADFGMCKENIWDGV-TTKXFCGTPDYIAPEIIAYQ 196
Query: 206 HLSVKADVFSFGVVILELISGQ 227
D ++FGV++ E+++GQ
Sbjct: 197 PYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 92/216 (42%), Gaps = 37/216 (17%)
Query: 51 NFHPSNKLGEGGFGPV-FKGKLDDGREIAVK---KLSHSSNQGKKEFENEAKLLARVQHR 106
N+ +G+G F V + G+E+AVK K +S+ +K F E +++ + H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHP 73
Query: 107 NVVNLLGYCAHGAEKLLIYEYVINESLDKVLFS---------------LIKDIQILFRK- 150
N+V L L+ EY + L + ++ +Q +K
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 151 -KKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNT--RVAGTNGYMAPEYVMHG-- 205
D+KA N+LLD KIADFG + F T N G Y APE + G
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEF----TFGNKLDAFCGAPPYAAPE-LFQGKK 188
Query: 206 HLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNL 241
+ + DV+S GV++ L+SG +L D QNL
Sbjct: 189 YDGPEVDVWSLGVILYTLVSG------SLPFDGQNL 218
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 123/298 (41%), Gaps = 56/298 (18%)
Query: 16 NLGSSREGDNEEDLEKIAAREQKHFPFEALVSATKN------FHPSNKLGEGGFGPVFKG 69
N ++++G +E +++ A+ ++ F + + ++N F LG G FG V
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDF-LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLV 60
Query: 70 KL-DDGREIAVKKLSHSSNQGKKEFE---NEAKLLARVQHRNVVNLLGYCAHGAEKLLIY 125
K + G A+K L K+ E NE ++L V +V L + ++
Sbjct: 61 KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 126 EYVINESLDKVL---------------------FSLIKDIQILFRKKKTDIKASNILLDD 164
EYV + L F + + +++R D+K N+++D
Sbjct: 121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR----DLKPENLIIDQ 176
Query: 165 KWIPKIADFGMARLFPEDQTHVNTR---VAGTNGYMAPEYVMHGHLSVKADVFSFGVVIL 221
+ ++ DFG A+ V R + GT Y+APE ++ + D ++ GV+I
Sbjct: 177 QGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIY 229
Query: 222 ELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGL 279
E+ +G F D Q +Y+K S ++ PS +SD D + +Q+ L
Sbjct: 230 EMAAGY--PPFFADQPIQ--------IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 96/207 (46%), Gaps = 40/207 (19%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 106 RNVVNLLG---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQI 146
NV+ LL H GA+ ++ + + ++ + +++ +++ ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 147 LFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAG---TNGYMAPEY 201
+ D+K SN+ +++ KI DF +AR H + + G T Y APE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFYLAR-------HTDDEMTGYVATRWYRAPEI 193
Query: 202 VMHG-HLSVKADVFSFGVVILELISGQ 227
+++ H + D++S G ++ EL++G+
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 28/200 (14%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQHR 106
+N P +G + L+ R +A+KKLS + K+ + E L+ V H+
Sbjct: 27 QNLKPIGSGAQGIVVAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHK 83
Query: 107 NVVNLLG-YCAHGAEKLLIYEYVINESLDKVLFSLIKD-----------IQILFRKKKT- 153
N++ LL + + + Y++ E +D L +I+ Q+L K
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLH 143
Query: 154 -------DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
D+K SNI++ KI DFG+AR + + T T Y APE ++
Sbjct: 144 SAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 207 LSVKADVFSFGVVILELISG 226
D++S GV++ E+I G
Sbjct: 202 YKENVDIWSVGVIMGEMIKG 221
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 95/214 (44%), Gaps = 52/214 (24%)
Query: 58 LGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKL--LARVQHRNVVNLL--- 112
+G G +G V+KG LD+ R +AVK S ++ Q F NE + + ++H N+ +
Sbjct: 21 IGRGRYGAVYKGSLDE-RPVAVKVFSFANRQN---FINEKNIYRVPLMEHDNIARFIVGD 76
Query: 113 -GYCAHG-AEKLLIYEYVINESLDKVL--------------FSLIKDIQILFRK------ 150
A G E LL+ EY N SL K L S+ + + L +
Sbjct: 77 ERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDH 136
Query: 151 -----KKTDIKASNILLDDKWIPKIADFGMA------RLF-PEDQTHVNTRVAGTNGYMA 198
D+ + N+L+ + I+DFG++ RL P ++ + GT YMA
Sbjct: 137 YKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMA 196
Query: 199 PEYVMHGHLSVK--------ADVFSFGVVILELI 224
PE V+ G ++++ D+++ G++ E+
Sbjct: 197 PE-VLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 76/159 (47%), Gaps = 24/159 (15%)
Query: 146 ILFRKKKTDIKASNILLDDKWIPKIADFGMAR--LFPEDQTHVNTRVAGTNGYMAPEYVM 203
I++R D+K N+LLD + K+ D+GM + L P D T + GT Y+APE +
Sbjct: 174 IIYR----DLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---STFCGTPNYIAPEILR 226
Query: 204 HGHLSVKADVFSFGVVILELISGQRNSSFNL----DVDAQNLLDWAYKL-----YKKDKS 254
D ++ GV++ E+++G+ S F++ D QN D+ +++ + +S
Sbjct: 227 GEDYGFSVDWWALGVLMFEMMAGR--SPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS 284
Query: 255 LEIVDPSLAAS----DSGDQIAMCIQIGLLCTQGDPQLR 289
L + S+ S D +++ Q G QG P R
Sbjct: 285 LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 323
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 85/200 (42%), Gaps = 28/200 (14%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQHR 106
+N P +G + L+ R +A+KKLS + K+ + E L+ V H+
Sbjct: 28 QNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 84
Query: 107 NVVNLLG-YCAHGAEKLLIYEYVINESLDKVLFSLIKD-----------IQILFRKKKT- 153
N++ LL + + + Y++ E +D L +I+ Q+L K
Sbjct: 85 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 144
Query: 154 -------DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
D+K SNI++ KI DFG+AR + + T T Y APE ++
Sbjct: 145 SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMG 202
Query: 207 LSVKADVFSFGVVILELISG 226
D++S G ++ E+I G
Sbjct: 203 YKENVDIWSVGCIMGEMIKG 222
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 105/256 (41%), Gaps = 49/256 (19%)
Query: 52 FHPSNKLGEGGFGPVFKGK-LDDGREIAVKKLSHSSNQGKKEFE---NEAKLLARVQHRN 107
F LG G FG V K ++ G A+K L K+ E NE ++L V
Sbjct: 29 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 88
Query: 108 VVNLLGYCAHGAEKLLIYEYV----INESLDKV-----------------LFSLIKDIQI 146
+V L + ++ EYV + L ++ F + + +
Sbjct: 89 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 148
Query: 147 LFRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTR---VAGTNGYMAPEYVM 203
++R D+K N+L+D + ++ DFG A+ V R + GT Y+APE ++
Sbjct: 149 IYR----DLKPENLLIDQQGYIQVTDFGFAK-------RVKGRTWTLCGTPEYLAPEIIL 197
Query: 204 HGHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLA 263
+ D ++ GV+I E+ +G F D Q +Y+K S ++ PS
Sbjct: 198 SKGYNKAVDWWALGVLIYEMAAGY--PPFFADQPIQ--------IYEKIVSGKVRFPSHF 247
Query: 264 ASDSGDQIAMCIQIGL 279
+SD D + +Q+ L
Sbjct: 248 SSDLKDLLRNLLQVDL 263
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 32/202 (15%)
Query: 51 NFHPSNKLGEGGFGPVFKGK-LDDGREIAVKKLSHSSN-QGKKEFENEAKLLAR-VQHRN 107
+ P +LG G +G V K + + G+ +AVK++ + N Q +K + + R V
Sbjct: 52 DLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPF 111
Query: 108 VVNLLG---------YCAHGAEKLL--IYEYVINES-------LDKVLFSLIKDIQILFR 149
V G C + L Y+ VI++ L K+ S++K ++ L
Sbjct: 112 TVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS 171
Query: 150 KKKT---DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYV---- 202
K D+K SN+L++ K+ DFG++ + + T AG YMAPE +
Sbjct: 172 KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVD--SVAKTIDAGCKPYMAPERINPEL 229
Query: 203 -MHGHLSVKADVFSFGVVILEL 223
G+ SVK+D++S G+ ++EL
Sbjct: 230 NQKGY-SVKSDIWSLGITMIEL 250
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 85/200 (42%), Gaps = 28/200 (14%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQHR 106
+N P +G + L+ R +A+KKLS + K+ + E L+ V H+
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 83
Query: 107 NVVNLLG-YCAHGAEKLLIYEYVINESLDKVLFSLIKD-----------IQILFRKKKT- 153
N++ LL + + + Y++ E +D L +I+ Q+L K
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 154 -------DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
D+K SNI++ KI DFG+AR + + T T Y APE ++
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 207 LSVKADVFSFGVVILELISG 226
D++S G ++ E+I G
Sbjct: 202 YKENVDIWSVGCIMGEMIKG 221
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 85/200 (42%), Gaps = 28/200 (14%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQHR 106
+N P +G + L+ R +A+KKLS + K+ + E L+ V H+
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 83
Query: 107 NVVNLLG-YCAHGAEKLLIYEYVINESLDKVLFSLIKD-----------IQILFRKKKT- 153
N++ LL + + + Y++ E +D L +I+ Q+L K
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 154 -------DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
D+K SNI++ KI DFG+AR + + T T Y APE ++
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 207 LSVKADVFSFGVVILELISG 226
D++S G ++ E+I G
Sbjct: 202 YKENVDIWSVGCIMGEMIKG 221
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 122/298 (40%), Gaps = 56/298 (18%)
Query: 16 NLGSSREGDNEEDLEKIAAREQKHFPFEALVSATKN------FHPSNKLGEGGFGPVFKG 69
N ++ +G +E +++ A+ ++ F + + ++N F LG G FG V
Sbjct: 2 NAAAACKGSEQESVKEFLAKAKEDF-LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLV 60
Query: 70 KL-DDGREIAVKKLSHSSNQGKKEFE---NEAKLLARVQHRNVVNLLGYCAHGAEKLLIY 125
K + G A+K L K+ E NE ++L V +V L + ++
Sbjct: 61 KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 126 EYVINESLDKVL---------------------FSLIKDIQILFRKKKTDIKASNILLDD 164
EYV + L F + + +++R D+K N+L+D
Sbjct: 121 EYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR----DLKPENLLIDQ 176
Query: 165 KWIPKIADFGMARLFPEDQTHVNTR---VAGTNGYMAPEYVMHGHLSVKADVFSFGVVIL 221
+ ++ DFG A+ V R + GT Y+APE ++ + D ++ GV+I
Sbjct: 177 QGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 222 ELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGL 279
E+ +G F D Q +Y+K S ++ PS +SD D + +Q+ L
Sbjct: 230 EMAAGY--PPFFADQPIQ--------IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 154 DIKASNILLDDKWIPKIADFGMAR--LFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKA 211
D+K NILLD KIADFGM + + + +T+ GT Y+APE ++ +
Sbjct: 144 DLKLDNILLDKDGHIKIADFGMCKENMLGDAKTN---EFCGTPDYIAPEILLGQKYNHSV 200
Query: 212 DVFSFGVVILELISGQ 227
D +SFGV++ E++ GQ
Sbjct: 201 DWWSFGVLLYEMLIGQ 216
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 68/144 (47%), Gaps = 19/144 (13%)
Query: 103 VQHRNVVNLLGYCAHGAEKLLIYEYVIN-ESLDKVLFSL---IKDIQILFRK-------- 150
+ H NVV G+ G + L EY E D++ + D Q F +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 151 -----KKTDIKASNILLDDKWIPKIADFGMARLFP-EDQTHVNTRVAGTNGYMAPEYVMH 204
DIK N+LLD++ KI+DFG+A +F ++ + ++ GT Y+APE +
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 205 GHLSVK-ADVFSFGVVILELISGQ 227
+ DV+S G+V+ +++G+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 99/216 (45%), Gaps = 33/216 (15%)
Query: 93 FENEAKLLARVQHRNVVNLLGYCAHG----AEKLLIYEYVINESLDKVLFSLIKDIQILF 148
F+ E++L +++ N +L+ + E Y I+ +L+ + + I++
Sbjct: 79 FQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALN-----YLHERGIIY 133
Query: 149 RKKKTDIKASNILLDDKWIPKIADFGMAR--LFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
R D+K N+LLD + K+ D+GM + L P D T + GT Y+APE +
Sbjct: 134 R----DLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIAPEILRGED 186
Query: 207 LSVKADVFSFGVVILELISGQRNSSFNL----DVDAQNLLDWAYKL-----YKKDKSLEI 257
D ++ GV++ E+++G+ S F++ D QN D+ +++ + +SL +
Sbjct: 187 YGFSVDWWALGVLMFEMMAGR--SPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSV 244
Query: 258 VDPSLAAS----DSGDQIAMCIQIGLLCTQGDPQLR 289
S+ S D +++ Q G QG P R
Sbjct: 245 KAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 280
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 24/159 (15%)
Query: 146 ILFRKKKTDIKASNILLDDKWIPKIADFGMAR--LFPEDQTHVNTRVAGTNGYMAPEYVM 203
I++R D+K N+LLD + K+ D+GM + L P D T + GT Y+APE +
Sbjct: 142 IIYR----DLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIAPEILR 194
Query: 204 HGHLSVKADVFSFGVVILELISGQRNSSFNL----DVDAQNLLDWAYKL-----YKKDKS 254
D ++ GV++ E+++G+ S F++ D QN D+ +++ + +S
Sbjct: 195 GEDYGFSVDWWALGVLMFEMMAGR--SPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS 252
Query: 255 LEIVDPSLAAS----DSGDQIAMCIQIGLLCTQGDPQLR 289
+ + S+ S D +++ Q G QG P R
Sbjct: 253 MSVKAASVLKSFLNKDPKERLGCLPQTGFADIQGHPFFR 291
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 98/205 (47%), Gaps = 36/205 (17%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 106 RNVVNLLG---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQI 146
NV+ LL H GA+ ++ + + ++ + +++ +++ ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 147 LFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQT-HVNTRVAGTNGYMAPEYVM 203
+ D+K SN+ +++ KI FG+AR ++ T +V TR Y APE ++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATR-----WYRAPEIML 195
Query: 204 HG-HLSVKADVFSFGVVILELISGQ 227
+ H + D++S G ++ EL++G+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 154 DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADV 213
D+K NILLD KIADFGM + N GT Y+APE ++ + D
Sbjct: 143 DLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNX-FCGTPDYIAPEILLGQKYNHSVDW 201
Query: 214 FSFGVVILELISGQ 227
+SFGV++ E++ GQ
Sbjct: 202 WSFGVLLYEMLIGQ 215
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 99/237 (41%), Gaps = 35/237 (14%)
Query: 11 LLKHFNLGSSREGDNEEDLEKIAAREQKHFPFEALVSATKNFHPSNKLGEGGFGPVFKGK 70
+ KH+N+ S+ DN+ + E F L +N P +G +
Sbjct: 33 IAKHYNMSKSK-VDNQ-----FYSVEVGDSTFTVL-KRYQNLKPIGSGAQGIVCAAYDAV 85
Query: 71 LDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQHRNVVNLLG-YCAHGAEKLLIYE 126
LD R +A+KKLS + K+ + E L+ V H+N+++LL + +
Sbjct: 86 LD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDV 142
Query: 127 YVINESLDKVLFSLIKD-----------IQILFRKKKT--------DIKASNILLDDKWI 167
Y++ E +D L +I+ Q+L K D+K SNI++
Sbjct: 143 YLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 202
Query: 168 PKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVVILELI 224
KI DFG+AR + + T T Y APE ++ D++S G ++ E++
Sbjct: 203 LKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 76/159 (47%), Gaps = 24/159 (15%)
Query: 146 ILFRKKKTDIKASNILLDDKWIPKIADFGMAR--LFPEDQTHVNTRVAGTNGYMAPEYVM 203
I++R D+K N+LLD + K+ D+GM + L P D T + GT Y+APE +
Sbjct: 127 IIYR----DLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIAPEILR 179
Query: 204 HGHLSVKADVFSFGVVILELISGQRNSSFNL----DVDAQNLLDWAYKL-----YKKDKS 254
D ++ GV++ E+++G+ S F++ D QN D+ +++ + +S
Sbjct: 180 GEDYGFSVDWWALGVLMFEMMAGR--SPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS 237
Query: 255 LEIVDPSLAAS----DSGDQIAMCIQIGLLCTQGDPQLR 289
L + S+ S D +++ Q G QG P R
Sbjct: 238 LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 276
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 90/200 (45%), Gaps = 39/200 (19%)
Query: 58 LGEGGFGPVFKGKLDDGR---EIAVKKLSH--SSNQGKKEFENEAKLLARVQHRNVVNLL 112
+G G +G V DGR ++A+KKL S K E +LL ++H NV+ LL
Sbjct: 33 VGSGAYGAVCSAV--DGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLL 90
Query: 113 G-------------------YCAHGAEKLLIYEYVINESLDKVLFSLIKDIQILFRKK-- 151
+ KL+ +E + + + +++ ++K ++ +
Sbjct: 91 DVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGII 150
Query: 152 KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAG---TNGYMAPEYVMHG-HL 207
D+K N+ +++ KI DFG+AR ++ + G T Y APE +++
Sbjct: 151 HRDLKPGNLAVNEDCELKILDFGLAR-------QADSEMXGXVVTRWYRAPEVILNWMRY 203
Query: 208 SVKADVFSFGVVILELISGQ 227
+ D++S G ++ E+I+G+
Sbjct: 204 TQTVDIWSVGCIMAEMITGK 223
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 84/213 (39%), Gaps = 41/213 (19%)
Query: 58 LGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGK-----------KEFENEAKLLARVQHR 106
+ G +G V G +G +A+K++ ++ + G+ K E +LL H
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 107 NVVNLLGYCAHGAEKLLIYEYVINESLDKVLFSLIKDIQILFRKKKT------------- 153
N++ L H E + Y++ E + L +I D +I+ +
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHV 149
Query: 154 ---------DIKASNILLDDKWIPKIADFGMARLFPEDQTHVN-TRVAGTNGYMAPEYVM 203
D+ NILL D I DF +AR ED N T Y APE VM
Sbjct: 150 LHEAGVVHRDLHPGNILLADNNDITICDFNLAR---EDTADANKTHYVTHRWYRAPELVM 206
Query: 204 HGHLSVK-ADVFSFGVVILELISGQ---RNSSF 232
K D++S G V+ E+ + + R S+F
Sbjct: 207 QFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTF 239
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 44/204 (21%)
Query: 61 GGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKL--LARVQHRNVVNLLGYCAHG 118
G FG V+K +L + +AVK Q K+ ++NE ++ L ++H N++ +G G
Sbjct: 35 GRFGCVWKAQLLN-EYVAVKIFP---IQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRG 90
Query: 119 A-------------EKLLIYEYV------------INESLDKVLFSLIKDIQILFRKKK- 152
EK + +++ I E++ + L L +DI L K
Sbjct: 91 TSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKP 150
Query: 153 ----TDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTR-VAGTNGYMAPEYVMHGHL 207
DIK+ N+LL + IADFG+A F ++ +T GT YMAPE V+ G +
Sbjct: 151 AISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPE-VLEGAI 209
Query: 208 S------VKADVFSFGVVILELIS 225
+ ++ D+++ G+V+ EL S
Sbjct: 210 NFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 84/213 (39%), Gaps = 41/213 (19%)
Query: 58 LGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGK-----------KEFENEAKLLARVQHR 106
+ G +G V G +G +A+K++ ++ + G+ K E +LL H
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 107 NVVNLLGYCAHGAEKLLIYEYVINESLDKVLFSLIKDIQILFRKKKT------------- 153
N++ L H E + Y++ E + L +I D +I+ +
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHV 149
Query: 154 ---------DIKASNILLDDKWIPKIADFGMARLFPEDQTHVN-TRVAGTNGYMAPEYVM 203
D+ NILL D I DF +AR ED N T Y APE VM
Sbjct: 150 LHEAGVVHRDLHPGNILLADNNDITICDFNLAR---EDTADANKTHYVTHRWYRAPELVM 206
Query: 204 HGHLSVK-ADVFSFGVVILELISGQ---RNSSF 232
K D++S G V+ E+ + + R S+F
Sbjct: 207 QFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTF 239
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 85/200 (42%), Gaps = 28/200 (14%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQHR 106
+N P +G + L+ R +A+KKLS + K+ + E L+ V H+
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 83
Query: 107 NVVNLLG-YCAHGAEKLLIYEYVINESLDKVLFSLIKD-----------IQILFRKKKT- 153
N++ LL + + + Y++ E +D L +I+ Q+L K
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 154 -------DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
D+K SNI++ KI DFG+AR + + T T Y APE ++
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPEVVTRYYRAPEVILGMG 201
Query: 207 LSVKADVFSFGVVILELISG 226
D++S G ++ E+I G
Sbjct: 202 YKENVDIWSVGCIMGEMIKG 221
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 60/108 (55%), Gaps = 10/108 (9%)
Query: 128 VINES-LDKVLFSLIKDIQILFRKKKT--DIKASNILLDDKWIPKIADFGMARLFPE--- 181
V++ES + +L +++ ++ L + + D+KA NILL + +IADFG++
Sbjct: 117 VLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGD 176
Query: 182 -DQTHVNTRVAGTNGYMAPEYV--MHGHLSVKADVFSFGVVILELISG 226
+ V GT +MAPE + + G+ KAD++SFG+ +EL +G
Sbjct: 177 ITRNKVRKTFVGTPCWMAPEVMEQVRGY-DFKADIWSFGITAIELATG 223
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 98/205 (47%), Gaps = 36/205 (17%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 106 RNVVNLLG---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQI 146
NV+ LL H GA+ ++ + + ++ + +++ +++ ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 147 LFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQT-HVNTRVAGTNGYMAPEYVM 203
+ D+K SN+ +++ KI D G+AR ++ T +V TR Y APE ++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATR-----WYRAPEIML 195
Query: 204 HG-HLSVKADVFSFGVVILELISGQ 227
+ H + D++S G ++ EL++G+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 28/200 (14%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQHR 106
+N P +G + L+ R +A+KKLS + K+ + E L+ V H+
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 83
Query: 107 NVVNLLG-YCAHGAEKLLIYEYVINESLDK-----------------VLFSLIKDIQILF 148
N++ LL + + + Y++ E +D +L+ ++ I+ L
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 149 RKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
D+K SNI++ KI DFG+AR + + T T Y APE ++
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 207 LSVKADVFSFGVVILELISG 226
D++S G ++ E+I G
Sbjct: 202 YKENVDIWSVGCIMGEMIKG 221
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 122/298 (40%), Gaps = 56/298 (18%)
Query: 16 NLGSSREGDNEEDLEKIAAREQKHFPFEALVSATKN------FHPSNKLGEGGFGPVFKG 69
N ++++G +E +++ A+ ++ F + + ++N F LG G FG V
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDF-LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLV 60
Query: 70 KL-DDGREIAVKKLSHSSNQGKKEFE---NEAKLLARVQHRNVVNLLGYCAHGAEKLLIY 125
K + G A+K L K+ E NE ++L V +V L + ++
Sbjct: 61 KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 126 EYVINESLDKVL---------------------FSLIKDIQILFRKKKTDIKASNILLDD 164
EYV + L F + + +++R D+K N+L+D
Sbjct: 121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR----DLKPENLLIDQ 176
Query: 165 KWIPKIADFGMARLFPEDQTHVNTR---VAGTNGYMAPEYVMHGHLSVKADVFSFGVVIL 221
+ ++ DFG A+ V R + GT Y+AP ++ + D ++ GV+I
Sbjct: 177 QGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIY 229
Query: 222 ELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGL 279
E+ +G F D Q +Y+K S ++ PS +SD D + +Q+ L
Sbjct: 230 EMAAGY--PPFFADQPIQ--------IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 60/108 (55%), Gaps = 10/108 (9%)
Query: 128 VINES-LDKVLFSLIKDIQILFRKKKT--DIKASNILLDDKWIPKIADFGMARLFPE--- 181
V++ES + +L +++ ++ L + + D+KA NILL + +IADFG++
Sbjct: 112 VLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGD 171
Query: 182 -DQTHVNTRVAGTNGYMAPEYV--MHGHLSVKADVFSFGVVILELISG 226
+ V GT +MAPE + + G+ KAD++SFG+ +EL +G
Sbjct: 172 ITRNKVRKTFVGTPCWMAPEVMEQVRGY-DFKADIWSFGITAIELATG 218
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 49/208 (23%)
Query: 58 LGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA- 116
+G+G +G V++G G +AVK S ++ +K + E +L V R+ N+LG+ A
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFS---SRDEKSWFRETELYNTVMLRHE-NILGFIAS 70
Query: 117 -----HGAEKLLI----------YEYVINESLD-----KVLFSLIK-----DIQILFRKK 151
H + +L + Y+Y+ +LD +++ S+ I+I +
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQG 130
Query: 152 K-----TDIKASNILLDDKWIPKIADFGMARLFPEDQTHV----NTRVAGTNGYMAPEYV 202
K D+K+ NIL+ IAD G+A + + + N RV GT YMAPE V
Sbjct: 131 KPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYMAPE-V 188
Query: 203 MHGHLSV-------KADVFSFGVVILEL 223
+ + V + D+++FG+V+ E+
Sbjct: 189 LDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 49/208 (23%)
Query: 58 LGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA- 116
+G+G +G V++G G +AVK S ++ +K + E +L V R+ N+LG+ A
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFS---SRDEKSWFRETELYNTVMLRHE-NILGFIAS 70
Query: 117 -----HGAEKLLI----------YEYVINESLD-----KVLFSLIK-----DIQILFRKK 151
H + +L + Y+Y+ +LD +++ S+ I+I +
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQG 130
Query: 152 K-----TDIKASNILLDDKWIPKIADFGMARLFPEDQTHV----NTRVAGTNGYMAPEYV 202
K D+K+ NIL+ IAD G+A + + + N RV GT YMAPE V
Sbjct: 131 KPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYMAPE-V 188
Query: 203 MHGHLSV-------KADVFSFGVVILEL 223
+ + V + D+++FG+V+ E+
Sbjct: 189 LDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 87/206 (42%), Gaps = 31/206 (15%)
Query: 47 SATKNFHPSNKLGEGGFGPV---FKGKLDDGREIAVKKLS---HSSNQGKKEFENEAKLL 100
+ K + +G G G V F L G +AVKKLS + K+ + E LL
Sbjct: 19 TVLKRYQQLKPIGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAY-RELVLL 75
Query: 101 ARVQHRNVVNLLGYCA------HGAEKLLIYEY-------VINESLDK-----VLFSLIK 142
V H+N+++LL + L+ E VI+ LD +L+ ++
Sbjct: 76 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLC 135
Query: 143 DIQILFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPE 200
I+ L D+K SNI++ KI DFG+AR + T T Y APE
Sbjct: 136 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TASTNFMMTPYVVTRYYRAPE 193
Query: 201 YVMHGHLSVKADVFSFGVVILELISG 226
++ D++S G ++ EL+ G
Sbjct: 194 VILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 109/288 (37%), Gaps = 69/288 (23%)
Query: 58 LGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAH 117
+G+G FG V+ G+ I + + + K F+ E + +H NVV +G C
Sbjct: 41 IGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS 100
Query: 118 GAEKLLIYEYVINESLDKVLFSLIKDIQILFRKKKT----------------------DI 155
+I + L+S+++D +I+ KT D+
Sbjct: 101 PPHLAIITSLCKG----RTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDL 156
Query: 156 KASNILLDDKWIPKIADFGMARLF-------PEDQTHVNTRVAGTNGYMAPEYVMHGH-- 206
K+ N+ D+ + I DFG+ + ED+ + G ++APE +
Sbjct: 157 KSKNVFYDNGKVV-ITDFGLFSISGVLQAGRREDKLRIQN---GWLCHLAPEIIRQLSPD 212
Query: 207 -------LSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSL---- 255
S +DVF+ G + EL + +W +K + +
Sbjct: 213 TEEDKLPFSKHSDVFALGTIWYEL----------------HAREWPFKTQPAEAIIWQMG 256
Query: 256 EIVDPSLAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVVVMLSKKP 303
+ P+L+ G +I+ I L C + + RPT +++ ML K P
Sbjct: 257 TGMKPNLSQIGMGKEIS---DILLFCWAFEQEERPTFTKLMDMLEKLP 301
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 98/205 (47%), Gaps = 36/205 (17%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 106 RNVVNLLG---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQI 146
NV+ LL H GA+ ++ + + ++ + +++ +++ ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 147 LFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQT-HVNTRVAGTNGYMAPEYVM 203
+ D+K SN+ +++ KI D G+AR ++ T +V TR Y APE ++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATR-----WYRAPEIML 195
Query: 204 HG-HLSVKADVFSFGVVILELISGQ 227
+ H + D++S G ++ EL++G+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 102/250 (40%), Gaps = 49/250 (19%)
Query: 58 LGEGGFGPVFKGKL-DDGREIAVKKLSHSSNQGKKEFE---NEAKLLARVQHRNVVNLLG 113
LG G FG V K + G A+K L K+ E NE ++L V +V L
Sbjct: 36 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 95
Query: 114 YCAHGAEKLLIYEYVINESLDKVL---------------------FSLIKDIQILFRKKK 152
+ ++ EYV + L F + + +++R
Sbjct: 96 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR--- 152
Query: 153 TDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTR---VAGTNGYMAPEYVMHGHLSV 209
D+K N+L+D++ ++ DFG A+ V R + GT Y+APE ++ +
Sbjct: 153 -DLKPENLLIDEQGYIQVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNK 204
Query: 210 KADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGD 269
D ++ GV+I E+ +G F D Q +Y+K S ++ PS +SD D
Sbjct: 205 AVDWWALGVLIYEMAAGY--PPFFADQPIQ--------IYEKIVSGKVRFPSHFSSDLKD 254
Query: 270 QIAMCIQIGL 279
+ +Q+ L
Sbjct: 255 LLRNLLQVDL 264
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 99/237 (41%), Gaps = 35/237 (14%)
Query: 11 LLKHFNLGSSREGDNEEDLEKIAAREQKHFPFEALVSATKNFHPSNKLGEGGFGPVFKGK 70
+ KH+N+ S+ DN+ + E F L +N P +G +
Sbjct: 33 IAKHYNMSKSK-VDNQ-----FYSVEVGDSTFTVL-KRYQNLKPIGSGAQGIVCAAYDAV 85
Query: 71 LDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQHRNVVNLLG-YCAHGAEKLLIYE 126
LD R +A+KKLS + K+ + E L+ V H+N+++LL + +
Sbjct: 86 LD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDV 142
Query: 127 YVINESLDKVLFSLIKD-----------IQILFRKKKT--------DIKASNILLDDKWI 167
Y++ E +D L +I+ Q+L K D+K SNI++
Sbjct: 143 YLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 202
Query: 168 PKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVVILELI 224
KI DFG+AR + + T T Y APE ++ D++S G ++ E++
Sbjct: 203 LKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 121/294 (41%), Gaps = 56/294 (19%)
Query: 20 SREGDNEEDLEKIAAREQKHFPFEALVSATKN------FHPSNKLGEGGFGPVFKGKL-D 72
+++G +E +++ A+ ++ F + + ++N F LG G FG V K +
Sbjct: 1 AKKGXEQESVKEFLAKAKEDF-LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKE 59
Query: 73 DGREIAVKKLSHSSNQGKKEFE---NEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVI 129
G A+K L K+ E NE ++L V +V L + ++ EYV
Sbjct: 60 SGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVA 119
Query: 130 NESLDKVL---------------------FSLIKDIQILFRKKKTDIKASNILLDDKWIP 168
+ L F + + +++R D+K N+L+D +
Sbjct: 120 GGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR----DLKPENLLIDQQGYI 175
Query: 169 KIADFGMARLFPEDQTHVNTR---VAGTNGYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
++ DFG A+ V R + GT Y+APE ++ + D ++ GV+I E+ +
Sbjct: 176 QVTDFGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 228
Query: 226 GQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGL 279
G F D Q +Y+K S ++ PS +SD D + +Q+ L
Sbjct: 229 GY--PPFFADQPIQ--------IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 272
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 35/203 (17%)
Query: 52 FHPSNKLGEGGFGPVF--KGKLDDGREIAVK-----KLSHSSNQGKKEFENEAKLLARVQ 104
+ KLG G +G V K KL G E A+K ++ +SN G +E +L ++
Sbjct: 23 YQRVKKLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGA--LLDEVAVLKQLD 79
Query: 105 HRNVVNLLGYCAHGAEKLLIYE-YVINESLDKVL----FSLIKDIQILFRKKKT------ 153
H N++ L + L+ E Y E D+++ FS + D ++ ++ +
Sbjct: 80 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEV-DAAVIMKQVLSGTTYLH 138
Query: 154 -------DIKASNILLDDK---WIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVM 203
D+K N+LL+ K + KI DFG++ F E + R+ GT Y+APE V+
Sbjct: 139 KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF-EVGGKMKERL-GTAYYIAPE-VL 195
Query: 204 HGHLSVKADVFSFGVVILELISG 226
K DV+S GV++ L+ G
Sbjct: 196 RKKYDEKCDVWSCGVILYILLCG 218
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 85/200 (42%), Gaps = 28/200 (14%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQHR 106
+N P +G + L+ R +A+KKLS + K+ + E L+ V H+
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHK 83
Query: 107 NVVNLLG-YCAHGAEKLLIYEYVINESLDKVLFSLIKD-----------IQILFRKKKT- 153
N++ LL + + + Y++ E +D L +I+ Q+L K
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLH 143
Query: 154 -------DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
D+K SNI++ KI DFG+AR + + T T Y APE ++
Sbjct: 144 SAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 207 LSVKADVFSFGVVILELISG 226
D++S G ++ E+I G
Sbjct: 202 YKENVDIWSVGCIMGEMIKG 221
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 32/202 (15%)
Query: 51 NFHPSNKLGEGGFGPVFKGK-LDDGREIAVKKLSHSSN-QGKKEFENEAKLLAR-VQHRN 107
+ P +LG G +G V K + + G+ +AVK++ + N Q +K + + R V
Sbjct: 8 DLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPF 67
Query: 108 VVNLLG---------YCAHGAEKLL--IYEYVINES-------LDKVLFSLIKDIQILFR 149
V G C + L Y+ VI++ L K+ S++K ++ L
Sbjct: 68 TVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS 127
Query: 150 KKKT---DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYV---- 202
K D+K SN+L++ K+ DFG++ +D AG YMAPE +
Sbjct: 128 KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVA--KDIDAGCKPYMAPERINPEL 185
Query: 203 -MHGHLSVKADVFSFGVVILEL 223
G+ SVK+D++S G+ ++EL
Sbjct: 186 NQKGY-SVKSDIWSLGITMIEL 206
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 98/205 (47%), Gaps = 36/205 (17%)
Query: 50 KNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQH 105
+N P +G G +G V G +AVKKLS S K+ + E +LL ++H
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 106 RNVVNLLG---------------YCAH--GAE--KLLIYEYVINESLDKVLFSLIKDIQI 146
NV+ LL H GA+ ++ + + ++ + +++ +++ ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 147 LFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQT-HVNTRVAGTNGYMAPEYVM 203
+ D+K SN+ +++ KI D G+AR ++ T +V TR Y APE ++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATR-----WYRAPEIML 195
Query: 204 HG-HLSVKADVFSFGVVILELISGQ 227
+ H + D++S G ++ EL++G+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 95/242 (39%), Gaps = 53/242 (21%)
Query: 58 LGEGGFGPVFKG-KLDDGREIAVKKLSHSSNQGKKEFEN------EAKLLARVQH--RNV 108
LG GGFG V+ G ++ D +A+K + E N E LL +V V
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 109 VNLLGYCAHGAEKLLIYEY---------------VINESLDKVLFSLI-------KDIQI 146
+ LL + +LI E + E L + F + + +
Sbjct: 91 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGV 150
Query: 147 LFRKKKTDIKASNILLD-DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYV-MH 204
L R DIK NIL+D ++ K+ DFG L + V T GT Y PE++ H
Sbjct: 151 LHR----DIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYH 203
Query: 205 GHLSVKADVFSFGVVILELISGQ----------RNSSF---NLDVDAQNLLDWAYKLYKK 251
+ A V+S G+++ +++ G R F + + Q+L+ W L
Sbjct: 204 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCLALRPS 263
Query: 252 DK 253
D+
Sbjct: 264 DR 265
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 119/290 (41%), Gaps = 54/290 (18%)
Query: 23 GDNEEDLEKIAAREQKHF--PFEALVSATKN---FHPSNKLGEGGFGPVFKGKL-DDGRE 76
N D+++ A+ ++ F +E+ T + F LG G FG V K + G
Sbjct: 2 ASNSSDVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNH 61
Query: 77 IAVKKLSHSSNQGKKEFE---NEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYV----I 129
A+K L K+ E NE ++L V +V L + ++ EYV +
Sbjct: 62 YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 121
Query: 130 NESLDKV-----------------LFSLIKDIQILFRKKKTDIKASNILLDDKWIPKIAD 172
L ++ F + + +++R D+K N+L+D + ++ D
Sbjct: 122 FSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR----DLKPENLLIDQQGYIQVTD 177
Query: 173 FGMARLFPEDQTHVNTR---VAGTNGYMAPEYVMHGHLSVKADVFSFGVVILELISGQRN 229
FG A+ V R + GT Y+APE ++ + D ++ GV+I E+ +G
Sbjct: 178 FGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGY-- 228
Query: 230 SSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGL 279
F D Q +Y+K S ++ PS +SD D + +Q+ L
Sbjct: 229 PPFFADQPIQ--------IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 270
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 28/200 (14%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQHR 106
+N P +G + L+ R +A+KKLS + K+ + E L+ V H+
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 83
Query: 107 NVVNLLG-YCAHGAEKLLIYEYVINESLDK-----------------VLFSLIKDIQILF 148
N++ LL + + + Y++ E +D +L+ ++ I+ L
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 149 RKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
D+K SNI++ KI DFG+AR + + T T Y APE ++
Sbjct: 144 SAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 207 LSVKADVFSFGVVILELISG 226
D++S G ++ E+I G
Sbjct: 202 YKENVDIWSVGCIMGEMIKG 221
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 87/217 (40%), Gaps = 55/217 (25%)
Query: 58 LGEGGFGPVFKGK-LDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLG--- 113
LG+G FG V K + D R A+KK+ H+ + +E LLA + H+ VV
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVXLLASLNHQYVVRYYAAWL 72
Query: 114 -----------------------YCAHGAEKLLIYEYVINESLDKV--LF-------SLI 141
YC + LI+ +N+ D+ LF S I
Sbjct: 73 ERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYI 132
Query: 142 KDIQILFRKKKTDIKASNILLDDKWIPKIADFGMAR-------LFPEDQTHVN------T 188
I+ R ++K NI +D+ KI DFG+A+ + D ++ T
Sbjct: 133 HSQGIIHR----NLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLT 188
Query: 189 RVAGTNGYMAPEYV-MHGHLSVKADVFSFGVVILELI 224
GT Y+A E + GH + K D +S G++ E I
Sbjct: 189 SAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 91/216 (42%), Gaps = 37/216 (17%)
Query: 51 NFHPSNKLGEGGFGPV-FKGKLDDGREIAVK---KLSHSSNQGKKEFENEAKLLARVQHR 106
N+ +G+G F V + G+E+AVK K +S+ +K F E ++ + H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIXKVLNHP 73
Query: 107 NVVNLLGYCAHGAEKLLIYEYVINESLDKVLFS---------------LIKDIQILFRK- 150
N+V L L+ EY + L + ++ +Q +K
Sbjct: 74 NIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKF 133
Query: 151 -KKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNT--RVAGTNGYMAPEYVMHG-- 205
D+KA N+LLD KIADFG + F T N G Y APE + G
Sbjct: 134 IVHRDLKAENLLLDADXNIKIADFGFSNEF----TFGNKLDAFCGAPPYAAPE-LFQGKK 188
Query: 206 HLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNL 241
+ + DV+S GV++ L+SG +L D QNL
Sbjct: 189 YDGPEVDVWSLGVILYTLVSG------SLPFDGQNL 218
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 95/242 (39%), Gaps = 53/242 (21%)
Query: 58 LGEGGFGPVFKG-KLDDGREIAVKKLSHSSNQGKKEFEN------EAKLLARVQH--RNV 108
LG GGFG V+ G ++ D +A+K + E N E LL +V V
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 109 VNLLGYCAHGAEKLLIYEY---------------VINESLDKVLFSLI-------KDIQI 146
+ LL + +LI E + E L + F + + +
Sbjct: 92 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGV 151
Query: 147 LFRKKKTDIKASNILLD-DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYV-MH 204
L R DIK NIL+D ++ K+ DFG L + V T GT Y PE++ H
Sbjct: 152 LHR----DIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYH 204
Query: 205 GHLSVKADVFSFGVVILELISGQ----------RNSSF---NLDVDAQNLLDWAYKLYKK 251
+ A V+S G+++ +++ G R F + + Q+L+ W L
Sbjct: 205 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCLALRPS 264
Query: 252 DK 253
D+
Sbjct: 265 DR 266
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 118/275 (42%), Gaps = 59/275 (21%)
Query: 58 LGEGGFGPVFKGKL----DDGR----EIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVV 109
LG+G F +FKG D G+ E+ +K L + + F A +++++ H+++V
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 110 NLLGYCAHGAEKLLIYEYVINESLDKVLFSLIKDIQILFRKKKT---------------- 153
G C G E +L+ E+V SLD L I IL++ +
Sbjct: 76 LNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLI 135
Query: 154 --DIKASNILL----DDKW----IPKIADFGMA-RLFPEDQTHVNTRVAGTNGYMAPEYV 202
++ A NILL D K K++D G++ + P+D + R+ ++ PE +
Sbjct: 136 HGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDI--LQERIP----WVPPECI 189
Query: 203 MH-GHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPS 261
+ +L++ D +SFG + E+ SG LD + + Y+ L P+
Sbjct: 190 ENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRK------LQFYEDRHQL----PA 239
Query: 262 LAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
A++ + I C+ +P RP+ R ++
Sbjct: 240 PKAAELANLINNCMDY-------EPDHRPSFRAII 267
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 95/242 (39%), Gaps = 53/242 (21%)
Query: 58 LGEGGFGPVFKG-KLDDGREIAVKKLSHSSNQGKKEFEN------EAKLLARVQH--RNV 108
LG GGFG V+ G ++ D +A+K + E N E LL +V V
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 109 VNLLGYCAHGAEKLLIYEY---------------VINESLDKVLFSLI-------KDIQI 146
+ LL + +LI E + E L + F + + +
Sbjct: 92 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGV 151
Query: 147 LFRKKKTDIKASNILLD-DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYV-MH 204
L R DIK NIL+D ++ K+ DFG L + V T GT Y PE++ H
Sbjct: 152 LHR----DIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYH 204
Query: 205 GHLSVKADVFSFGVVILELISGQ----------RNSSF---NLDVDAQNLLDWAYKLYKK 251
+ A V+S G+++ +++ G R F + + Q+L+ W L
Sbjct: 205 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPS 264
Query: 252 DK 253
D+
Sbjct: 265 DR 266
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 95/242 (39%), Gaps = 53/242 (21%)
Query: 58 LGEGGFGPVFKG-KLDDGREIAVKKLSHSSNQGKKEFEN------EAKLLARVQH--RNV 108
LG GGFG V+ G ++ D +A+K + E N E LL +V V
Sbjct: 64 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 123
Query: 109 VNLLGYCAHGAEKLLIYEY---------------VINESLDKVLFSLI-------KDIQI 146
+ LL + +LI E + E L + F + + +
Sbjct: 124 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGV 183
Query: 147 LFRKKKTDIKASNILLD-DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYV-MH 204
L R DIK NIL+D ++ K+ DFG L + V T GT Y PE++ H
Sbjct: 184 LHR----DIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYH 236
Query: 205 GHLSVKADVFSFGVVILELISGQ----------RNSSF---NLDVDAQNLLDWAYKLYKK 251
+ A V+S G+++ +++ G R F + + Q+L+ W L
Sbjct: 237 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCLALRPS 296
Query: 252 DK 253
D+
Sbjct: 297 DR 298
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 95/242 (39%), Gaps = 53/242 (21%)
Query: 58 LGEGGFGPVFKG-KLDDGREIAVKKLSHSSNQGKKEFEN------EAKLLARVQH--RNV 108
LG GGFG V+ G ++ D +A+K + E N E LL +V V
Sbjct: 51 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 110
Query: 109 VNLLGYCAHGAEKLLIYEY---------------VINESLDKVLFSLI-------KDIQI 146
+ LL + +LI E + E L + F + + +
Sbjct: 111 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGV 170
Query: 147 LFRKKKTDIKASNILLD-DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYV-MH 204
L R DIK NIL+D ++ K+ DFG L + V T GT Y PE++ H
Sbjct: 171 LHR----DIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYH 223
Query: 205 GHLSVKADVFSFGVVILELISGQ----------RNSSF---NLDVDAQNLLDWAYKLYKK 251
+ A V+S G+++ +++ G R F + + Q+L+ W L
Sbjct: 224 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPS 283
Query: 252 DK 253
D+
Sbjct: 284 DR 285
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 95/242 (39%), Gaps = 53/242 (21%)
Query: 58 LGEGGFGPVFKG-KLDDGREIAVKKLSHSSNQGKKEFEN------EAKLLARVQH--RNV 108
LG GGFG V+ G ++ D +A+K + E N E LL +V V
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 109 VNLLGYCAHGAEKLLIYEY---------------VINESLDKVLFSLI-------KDIQI 146
+ LL + +LI E + E L + F + + +
Sbjct: 91 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGV 150
Query: 147 LFRKKKTDIKASNILLD-DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYV-MH 204
L R DIK NIL+D ++ K+ DFG L + V T GT Y PE++ H
Sbjct: 151 LHR----DIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYH 203
Query: 205 GHLSVKADVFSFGVVILELISGQ----------RNSSF---NLDVDAQNLLDWAYKLYKK 251
+ A V+S G+++ +++ G R F + + Q+L+ W L
Sbjct: 204 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPS 263
Query: 252 DK 253
D+
Sbjct: 264 DR 265
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 95/242 (39%), Gaps = 53/242 (21%)
Query: 58 LGEGGFGPVFKG-KLDDGREIAVKKLSHSSNQGKKEFEN------EAKLLARVQH--RNV 108
LG GGFG V+ G ++ D +A+K + E N E LL +V V
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 109 VNLLGYCAHGAEKLLIYEY---------------VINESLDKVLFSLI-------KDIQI 146
+ LL + +LI E + E L + F + + +
Sbjct: 119 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGV 178
Query: 147 LFRKKKTDIKASNILLD-DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYV-MH 204
L R DIK NIL+D ++ K+ DFG L + V T GT Y PE++ H
Sbjct: 179 LHR----DIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYH 231
Query: 205 GHLSVKADVFSFGVVILELISGQ----------RNSSF---NLDVDAQNLLDWAYKLYKK 251
+ A V+S G+++ +++ G R F + + Q+L+ W L
Sbjct: 232 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCLALRPS 291
Query: 252 DK 253
D+
Sbjct: 292 DR 293
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 119/290 (41%), Gaps = 54/290 (18%)
Query: 23 GDNEEDLEKIAAREQKHF--PFEALVSATKN---FHPSNKLGEGGFGPVFKGKL-DDGRE 76
N D+++ A+ ++ F +E+ T + F LG G FG V K + G
Sbjct: 2 ASNSSDVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNH 61
Query: 77 IAVKKLSHSSNQGKKEFE---NEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYV----I 129
A+K L K+ E NE ++L V +V L + ++ EYV +
Sbjct: 62 YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 121
Query: 130 NESLDKV-----------------LFSLIKDIQILFRKKKTDIKASNILLDDKWIPKIAD 172
L ++ F + + +++R D+K N+L+D + ++ D
Sbjct: 122 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR----DLKPENLLIDQQGYIQVTD 177
Query: 173 FGMARLFPEDQTHVNTR---VAGTNGYMAPEYVMHGHLSVKADVFSFGVVILELISGQRN 229
FG A+ V R + GT Y+APE ++ + D ++ GV+I E+ +G
Sbjct: 178 FGFAK-------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGY-- 228
Query: 230 SSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGL 279
F D Q +Y+K S ++ PS +SD D + +Q+ L
Sbjct: 229 PPFFADQPIQ--------IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 270
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 28/198 (14%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQHR 106
+N P +G + LD R +A+KKLS + K+ + E L+ V H+
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHK 83
Query: 107 NVVNLLGYCA------HGAEKLLIYEY-------VINESLDK-----VLFSLIKDIQILF 148
N+++LL + L+ E VI LD +L+ ++ I+ L
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLH 143
Query: 149 RKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
D+K SNI++ KI DFG+AR + + T T Y APE ++
Sbjct: 144 SAGIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 207 LSVKADVFSFGVVILELI 224
D++S G ++ E++
Sbjct: 202 YKENVDIWSVGCIMGEMV 219
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 95/242 (39%), Gaps = 53/242 (21%)
Query: 58 LGEGGFGPVFKG-KLDDGREIAVKKLSHSSNQGKKEFEN------EAKLLARVQH--RNV 108
LG GGFG V+ G ++ D +A+K + E N E LL +V V
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 109 VNLLGYCAHGAEKLLIYEY---------------VINESLDKVLFSLI-------KDIQI 146
+ LL + +LI E + E L + F + + +
Sbjct: 92 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGV 151
Query: 147 LFRKKKTDIKASNILLD-DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYV-MH 204
L R DIK NIL+D ++ K+ DFG L + V T GT Y PE++ H
Sbjct: 152 LHR----DIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYH 204
Query: 205 GHLSVKADVFSFGVVILELISGQ----------RNSSF---NLDVDAQNLLDWAYKLYKK 251
+ A V+S G+++ +++ G R F + + Q+L+ W L
Sbjct: 205 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCLALRPX 264
Query: 252 DK 253
D+
Sbjct: 265 DR 266
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 28/200 (14%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQHR 106
+N P +G + L+ R +A+KKLS + K+ + E L+ V H+
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHK 83
Query: 107 NVVNLLG-YCAHGAEKLLIYEYVINESLDK-----------------VLFSLIKDIQILF 148
N++ LL + + + Y++ E +D +L+ ++ I+ L
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 149 RKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
D+K SNI++ KI DFG+AR + + T T Y APE ++
Sbjct: 144 SAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 207 LSVKADVFSFGVVILELISG 226
D++S G ++ E+I G
Sbjct: 202 YKENVDIWSVGCIMGEMIKG 221
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 95/242 (39%), Gaps = 53/242 (21%)
Query: 58 LGEGGFGPVFKG-KLDDGREIAVKKLSHSSNQGKKEFEN------EAKLLARVQ--HRNV 108
LG GGFG V+ G ++ D +A+K + E N E LL +V V
Sbjct: 39 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 98
Query: 109 VNLLGYCAHGAEKLLIYEY---------------VINESLDKVLFSLI-------KDIQI 146
+ LL + +LI E + E L + F + + +
Sbjct: 99 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGV 158
Query: 147 LFRKKKTDIKASNILLD-DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYV-MH 204
L R DIK NIL+D ++ K+ DFG L + V T GT Y PE++ H
Sbjct: 159 LHR----DIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYH 211
Query: 205 GHLSVKADVFSFGVVILELISGQ----------RNSSF---NLDVDAQNLLDWAYKLYKK 251
+ A V+S G+++ +++ G R F + + Q+L+ W L
Sbjct: 212 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCLALRPS 271
Query: 252 DK 253
D+
Sbjct: 272 DR 273
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 94/242 (38%), Gaps = 53/242 (21%)
Query: 58 LGEGGFGPVFKG-KLDDGREIAVKKLSHSSNQGKKEFEN------EAKLLARVQH--RNV 108
LG GGFG V+ G ++ D +A+K + E N E LL +V V
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 109 VNLLGYCAHGAEKLLIYEY---------------VINESLDKVLFSLI-------KDIQI 146
+ LL + +LI E + E L + F + + +
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGV 164
Query: 147 LFRKKKTDIKASNILLD-DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYV-MH 204
L R DIK NIL+D ++ K+ DFG L + V T GT Y PE++ H
Sbjct: 165 LHR----DIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYH 217
Query: 205 GHLSVKADVFSFGVVIL-------------ELISGQRNSSFNLDVDAQNLLDWAYKLYKK 251
+ A V+S G+++ E+I GQ + + Q+L+ W L
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXECQHLIRWCLALRPS 277
Query: 252 DK 253
D+
Sbjct: 278 DR 279
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 35/203 (17%)
Query: 52 FHPSNKLGEGGFGPVF--KGKLDDGREIAVK-----KLSHSSNQGKKEFENEAKLLARVQ 104
+ KLG G +G V K KL G E A+K ++ +SN G +E +L ++
Sbjct: 6 YQRVKKLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGA--LLDEVAVLKQLD 62
Query: 105 HRNVVNLLGYCAHGAEKLLIYE-YVINESLDKVL----FSLIKDIQILFRKKKT------ 153
H N++ L + L+ E Y E D+++ FS + D ++ ++ +
Sbjct: 63 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEV-DAAVIMKQVLSGTTYLH 121
Query: 154 -------DIKASNILLDDK---WIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVM 203
D+K N+LL+ K + KI DFG++ F E + R+ GT Y+APE V+
Sbjct: 122 KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF-EVGGKMKERL-GTAYYIAPE-VL 178
Query: 204 HGHLSVKADVFSFGVVILELISG 226
K DV+S GV++ L+ G
Sbjct: 179 RKKYDEKCDVWSCGVILYILLCG 201
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 84/198 (42%), Gaps = 28/198 (14%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQHR 106
+N P +G + LD R +A+KKLS + K+ + E L+ V H+
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 83
Query: 107 NVVNLLG-YCAHGAEKLLIYEYVINESLDKVLFSLIKD-----------IQILFRKKKT- 153
N+++LL + + Y++ E +D L +I+ Q+L K
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 154 -------DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
D+K SNI++ KI DFG+AR + + T T Y APE ++
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 207 LSVKADVFSFGVVILELI 224
D++S G ++ E++
Sbjct: 202 YKENVDIWSVGCIMGEMV 219
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 84/198 (42%), Gaps = 28/198 (14%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQHR 106
+N P +G + LD R +A+KKLS + K+ + E L+ V H+
Sbjct: 28 QNLKPIGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 84
Query: 107 NVVNLLG-YCAHGAEKLLIYEYVINESLDKVLFSLIKD-----------IQILFRKKKT- 153
N+++LL + + Y++ E +D L +I+ Q+L K
Sbjct: 85 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 144
Query: 154 -------DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
D+K SNI++ KI DFG+AR + + T T Y APE ++
Sbjct: 145 SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMG 202
Query: 207 LSVKADVFSFGVVILELI 224
D++S G ++ E++
Sbjct: 203 YKENVDIWSVGCIMGEMV 220
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 84/198 (42%), Gaps = 28/198 (14%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQHR 106
+N P +G + LD R +A+KKLS + K+ + E L+ V H+
Sbjct: 21 QNLKPIGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 77
Query: 107 NVVNLLG-YCAHGAEKLLIYEYVINESLDKVLFSLIKD-----------IQILFRKKKT- 153
N+++LL + + Y++ E +D L +I+ Q+L K
Sbjct: 78 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 137
Query: 154 -------DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
D+K SNI++ KI DFG+AR + + T T Y APE ++
Sbjct: 138 SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMG 195
Query: 207 LSVKADVFSFGVVILELI 224
D++S G ++ E++
Sbjct: 196 YKENVDIWSVGCIMGEMV 213
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 94/242 (38%), Gaps = 53/242 (21%)
Query: 58 LGEGGFGPVFKG-KLDDGREIAVKKLSHSSNQGKKEFEN------EAKLLARVQH--RNV 108
LG GGFG V+ G ++ D +A+K + E N E LL +V V
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 109 VNLLGYCAHGAEKLLIYEY---------------VINESLDKVLFSLI-------KDIQI 146
+ LL + +LI E + E L + F + + +
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGV 164
Query: 147 LFRKKKTDIKASNILLD-DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYV-MH 204
L R DIK NIL+D ++ K+ DFG L + V T GT Y PE++ H
Sbjct: 165 LHR----DIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYH 217
Query: 205 GHLSVKADVFSFGVVIL-------------ELISGQRNSSFNLDVDAQNLLDWAYKLYKK 251
+ A V+S G+++ E+I GQ + + Q+L+ W L
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXECQHLIRWCLALRPS 277
Query: 252 DK 253
D+
Sbjct: 278 DR 279
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 84/200 (42%), Gaps = 28/200 (14%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQHR 106
+N P +G + L+ R +A+KKLS + K+ + E L+ V H+
Sbjct: 29 QNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 85
Query: 107 NVVNLLG-YCAHGAEKLLIYEYVINESLDKVLFSLIKD-----------IQILFRKKKT- 153
N++ LL + + + Y++ E +D L +I+ Q+L K
Sbjct: 86 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 145
Query: 154 -------DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
D+K SNI++ KI DFG+AR + + T Y APE ++
Sbjct: 146 SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMVPFVVTRYYRAPEVILGMG 203
Query: 207 LSVKADVFSFGVVILELISG 226
D++S G ++ E+I G
Sbjct: 204 YKENVDIWSVGCIMGEMIKG 223
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 84/198 (42%), Gaps = 28/198 (14%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQHR 106
+N P +G + LD R +A+KKLS + K+ + E L+ V H+
Sbjct: 26 QNLKPIGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 82
Query: 107 NVVNLLG-YCAHGAEKLLIYEYVINESLDKVLFSLIKD-----------IQILFRKKKT- 153
N+++LL + + Y++ E +D L +I+ Q+L K
Sbjct: 83 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 142
Query: 154 -------DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
D+K SNI++ KI DFG+AR + + T T Y APE ++
Sbjct: 143 SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMG 200
Query: 207 LSVKADVFSFGVVILELI 224
D++S G ++ E++
Sbjct: 201 YKENVDIWSVGCIMGEMV 218
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 96/242 (39%), Gaps = 53/242 (21%)
Query: 58 LGEGGFGPVFKG-KLDDGREIAVKKLSHSSNQGKKEFEN------EAKLLARVQ--HRNV 108
LG GGFG V+ G ++ D +A+K + E N E LL +V V
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 109 VNLLGYCAHGAEKLLIYEYV---------------INESLDKVLFSLI-------KDIQI 146
+ LL + +LI E + + E L + F + + +
Sbjct: 76 IRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGV 135
Query: 147 LFRKKKTDIKASNILLD-DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYV-MH 204
L R DIK NIL+D ++ K+ DFG L + V T GT Y PE++ H
Sbjct: 136 LHR----DIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYH 188
Query: 205 GHLSVKADVFSFGVVILELISGQ----------RNSSF---NLDVDAQNLLDWAYKLYKK 251
+ A V+S G+++ +++ G R F + + Q+L+ W L
Sbjct: 189 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPS 248
Query: 252 DK 253
D+
Sbjct: 249 DR 250
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 94/242 (38%), Gaps = 53/242 (21%)
Query: 58 LGEGGFGPVFKG-KLDDGREIAVKKLSHSSNQGKKEFEN------EAKLLARVQH--RNV 108
LG GGFG V+ G ++ D +A+K + E N E LL +V V
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 109 VNLLGYCAHGAEKLLIYEY---------------VINESLDKVLFSLI-------KDIQI 146
+ LL + +LI E + E L + F + + +
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGV 163
Query: 147 LFRKKKTDIKASNILLD-DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYV-MH 204
L R DIK NIL+D ++ K+ DFG L + V T GT Y PE++ H
Sbjct: 164 LHR----DIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYH 216
Query: 205 GHLSVKADVFSFGVVIL-------------ELISGQRNSSFNLDVDAQNLLDWAYKLYKK 251
+ A V+S G+++ E+I GQ + + Q+L+ W L
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXECQHLIRWCLALRPS 276
Query: 252 DK 253
D+
Sbjct: 277 DR 278
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 84/198 (42%), Gaps = 28/198 (14%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQHR 106
+N P +G + LD R +A+KKLS + K+ + E L+ V H+
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 83
Query: 107 NVVNLLG-YCAHGAEKLLIYEYVINESLDKVLFSLIKD-----------IQILFRKKKT- 153
N+++LL + + Y++ E +D L +I+ Q+L K
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 154 -------DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
D+K SNI++ KI DFG+AR + + T T Y APE ++
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 207 LSVKADVFSFGVVILELI 224
D++S G ++ E++
Sbjct: 202 YKENVDIWSVGCIMGEMV 219
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 84/198 (42%), Gaps = 28/198 (14%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQHR 106
+N P +G + LD R +A+KKLS + K+ + E L+ V H+
Sbjct: 21 QNLKPIGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 77
Query: 107 NVVNLLG-YCAHGAEKLLIYEYVINESLDKVLFSLIKD-----------IQILFRKKKT- 153
N+++LL + + Y++ E +D L +I+ Q+L K
Sbjct: 78 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 137
Query: 154 -------DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
D+K SNI++ KI DFG+AR + + T T Y APE ++
Sbjct: 138 SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMG 195
Query: 207 LSVKADVFSFGVVILELI 224
D++S G ++ E++
Sbjct: 196 YKENVDIWSVGCIMGEMV 213
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 84/198 (42%), Gaps = 28/198 (14%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQHR 106
+N P +G + LD R +A+KKLS + K+ + E L+ V H+
Sbjct: 20 QNLKPIGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 76
Query: 107 NVVNLLG-YCAHGAEKLLIYEYVINESLDKVLFSLIKD-----------IQILFRKKKT- 153
N+++LL + + Y++ E +D L +I+ Q+L K
Sbjct: 77 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 136
Query: 154 -------DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
D+K SNI++ KI DFG+AR + + T T Y APE ++
Sbjct: 137 SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMG 194
Query: 207 LSVKADVFSFGVVILELI 224
D++S G ++ E++
Sbjct: 195 YKENVDIWSVGCIMGEMV 212
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 84/198 (42%), Gaps = 28/198 (14%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQHR 106
+N P +G + LD R +A+KKLS + K+ + E L+ V H+
Sbjct: 28 QNLKPIGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 84
Query: 107 NVVNLLG-YCAHGAEKLLIYEYVINESLDKVLFSLIKD-----------IQILFRKKKT- 153
N+++LL + + Y++ E +D L +I+ Q+L K
Sbjct: 85 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 144
Query: 154 -------DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
D+K SNI++ KI DFG+AR + + T T Y APE ++
Sbjct: 145 SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMG 202
Query: 207 LSVKADVFSFGVVILELI 224
D++S G ++ E++
Sbjct: 203 YKENVDIWSVGCIMGEMV 220
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 95/242 (39%), Gaps = 53/242 (21%)
Query: 58 LGEGGFGPVFKG-KLDDGREIAVKKLSHSSNQGKKEFEN------EAKLLARVQH--RNV 108
LG GGFG V+ G ++ D +A+K + E N E LL +V V
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 109 VNLLGYCAHGAEKLLIYEY---------------VINESLDKVLFSLI-------KDIQI 146
+ LL + +LI E + E L + F + + +
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGV 163
Query: 147 LFRKKKTDIKASNILLD-DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYV-MH 204
L R DIK NIL+D ++ K+ DFG L + V T GT Y PE++ H
Sbjct: 164 LHR----DIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYH 216
Query: 205 GHLSVKADVFSFGVVILELISGQ----------RNSSF---NLDVDAQNLLDWAYKLYKK 251
+ A V+S G+++ +++ G R F + + Q+L+ W L
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPS 276
Query: 252 DK 253
D+
Sbjct: 277 DR 278
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 80/191 (41%), Gaps = 22/191 (11%)
Query: 58 LGEGGFGPVFKGKLDDGREIAVKKLSHSS----NQGKKEFENEAKLLARVQHRNVVNLLG 113
LG+GGF ++ D +E+ K+ S K++ E + + + +VV G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 114 YCAHGAEKLLIYEYVINESLDKV---------------LFSLIKDIQILF--RKKKTDIK 156
+ ++ E SL ++ + I+ +Q L R D+K
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLK 169
Query: 157 ASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSF 216
N+ L+D KI DFG+A D T + GT Y+APE + S + D++S
Sbjct: 170 LGNLFLNDDMDVKIGDFGLATKIEFDGERKKT-LCGTPNYIAPEVLCKKGHSFEVDIWSL 228
Query: 217 GVVILELISGQ 227
G ++ L+ G+
Sbjct: 229 GCILYTLLVGK 239
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 95/242 (39%), Gaps = 53/242 (21%)
Query: 58 LGEGGFGPVFKG-KLDDGREIAVKKLSHSSNQGKKEFEN------EAKLLARVQ--HRNV 108
LG GGFG V+ G ++ D +A+K + E N E LL +V V
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 109 VNLLGYCAHGAEKLLIYEY---------------VINESLDKVLFSLI-------KDIQI 146
+ LL + +LI E + E L + F + + +
Sbjct: 77 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGV 136
Query: 147 LFRKKKTDIKASNILLD-DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYV-MH 204
L R DIK NIL+D ++ K+ DFG L + V T GT Y PE++ H
Sbjct: 137 LHR----DIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYH 189
Query: 205 GHLSVKADVFSFGVVILELISGQ----------RNSSF---NLDVDAQNLLDWAYKLYKK 251
+ A V+S G+++ +++ G R F + + Q+L+ W L
Sbjct: 190 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPS 249
Query: 252 DK 253
D+
Sbjct: 250 DR 251
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 118/275 (42%), Gaps = 59/275 (21%)
Query: 58 LGEGGFGPVFKGKL----DDGR----EIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVV 109
LG+G F +FKG D G+ E+ +K L + + F A +++++ H+++V
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 110 NLLGYCAHGAEKLLIYEYVINESLDKVLFSLIKDIQILFRKKKT---------------- 153
G C G E +L+ E+V SLD L I IL++ +
Sbjct: 76 LNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAWAMHFLEENTLI 135
Query: 154 --DIKASNILL----DDKW----IPKIADFGMA-RLFPEDQTHVNTRVAGTNGYMAPEYV 202
++ A NILL D K K++D G++ + P+D + R+ ++ PE +
Sbjct: 136 HGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDI--LQERIP----WVPPECI 189
Query: 203 MH-GHLSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPS 261
+ +L++ D +SFG + E+ SG LD + + Y+ L P+
Sbjct: 190 ENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRK------LQFYEDRHQL----PA 239
Query: 262 LAASDSGDQIAMCIQIGLLCTQGDPQLRPTMRRVV 296
A++ + I C+ +P RP+ R ++
Sbjct: 240 PKAAELANLINNCMDY-------EPDHRPSFRAII 267
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 95/242 (39%), Gaps = 53/242 (21%)
Query: 58 LGEGGFGPVFKG-KLDDGREIAVKKLSHSSNQGKKEFEN------EAKLLARVQH--RNV 108
LG GGFG V+ G ++ D +A+K + E N E LL +V V
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 109 VNLLGYCAHGAEKLLIYEY---------------VINESLDKVLFSLI-------KDIQI 146
+ LL + +LI E + E L + F + + +
Sbjct: 77 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGV 136
Query: 147 LFRKKKTDIKASNILLD-DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYV-MH 204
L R DIK NIL+D ++ K+ DFG L + V T GT Y PE++ H
Sbjct: 137 LHR----DIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYH 189
Query: 205 GHLSVKADVFSFGVVILELISGQ----------RNSSF---NLDVDAQNLLDWAYKLYKK 251
+ A V+S G+++ +++ G R F + + Q+L+ W L
Sbjct: 190 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPS 249
Query: 252 DK 253
D+
Sbjct: 250 DR 251
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 95/242 (39%), Gaps = 53/242 (21%)
Query: 58 LGEGGFGPVFKG-KLDDGREIAVKKLSHSSNQGKKEFEN------EAKLLARVQ--HRNV 108
LG GGFG V+ G ++ D +A+K + E N E LL +V V
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 109 VNLLGYCAHGAEKLLIYEY---------------VINESLDKVLFSLI-------KDIQI 146
+ LL + +LI E + E L + F + + +
Sbjct: 76 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGV 135
Query: 147 LFRKKKTDIKASNILLD-DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYV-MH 204
L R DIK NIL+D ++ K+ DFG L + V T GT Y PE++ H
Sbjct: 136 LHR----DIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYH 188
Query: 205 GHLSVKADVFSFGVVILELISGQ----------RNSSF---NLDVDAQNLLDWAYKLYKK 251
+ A V+S G+++ +++ G R F + + Q+L+ W L
Sbjct: 189 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPS 248
Query: 252 DK 253
D+
Sbjct: 249 DR 250
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 95/242 (39%), Gaps = 53/242 (21%)
Query: 58 LGEGGFGPVFKG-KLDDGREIAVKKLSHSSNQGKKEFEN------EAKLLARVQH--RNV 108
LG GGFG V+ G ++ D +A+K + E N E LL +V V
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 109 VNLLGYCAHGAEKLLIYEY---------------VINESLDKVLFSLI-------KDIQI 146
+ LL + +LI E + E L + F + + +
Sbjct: 119 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGV 178
Query: 147 LFRKKKTDIKASNILLD-DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYV-MH 204
L R DIK NIL+D ++ K+ DFG L + V T GT Y PE++ H
Sbjct: 179 LHR----DIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYH 231
Query: 205 GHLSVKADVFSFGVVILELISGQ----------RNSSF---NLDVDAQNLLDWAYKLYKK 251
+ A V+S G+++ +++ G R F + + Q+L+ W L
Sbjct: 232 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPS 291
Query: 252 DK 253
D+
Sbjct: 292 DR 293
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 94/242 (38%), Gaps = 53/242 (21%)
Query: 58 LGEGGFGPVFKG-KLDDGREIAVKKLSHSSNQGKKEFEN------EAKLLARVQH--RNV 108
LG GGFG V+ G ++ D +A+K + E N E LL +V V
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 109 VNLLGYCAHGAEKLLIYEY---------------VINESLDKVLFSLI-------KDIQI 146
+ LL + +LI E + E L + F + + +
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGV 163
Query: 147 LFRKKKTDIKASNILLD-DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYV-MH 204
L R DIK NIL+D ++ K+ DFG L + V T GT Y PE++ H
Sbjct: 164 LHR----DIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYH 216
Query: 205 GHLSVKADVFSFGVVIL-------------ELISGQRNSSFNLDVDAQNLLDWAYKLYKK 251
+ A V+S G+++ E+I GQ + + Q+L+ W L
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCLALRPS 276
Query: 252 DK 253
D+
Sbjct: 277 DR 278
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 95/242 (39%), Gaps = 53/242 (21%)
Query: 58 LGEGGFGPVFKG-KLDDGREIAVKKLSHSSNQGKKEFEN------EAKLLARVQ--HRNV 108
LG GGFG V+ G ++ D +A+K + E N E LL +V V
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 109 VNLLGYCAHGAEKLLIYEY---------------VINESLDKVLFSLI-------KDIQI 146
+ LL + +LI E + E L + F + + +
Sbjct: 77 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGV 136
Query: 147 LFRKKKTDIKASNILLD-DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYV-MH 204
L R DIK NIL+D ++ K+ DFG L + V T GT Y PE++ H
Sbjct: 137 LHR----DIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYH 189
Query: 205 GHLSVKADVFSFGVVILELISGQ----------RNSSF---NLDVDAQNLLDWAYKLYKK 251
+ A V+S G+++ +++ G R F + + Q+L+ W L
Sbjct: 190 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPS 249
Query: 252 DK 253
D+
Sbjct: 250 DR 251
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 94/242 (38%), Gaps = 53/242 (21%)
Query: 58 LGEGGFGPVFKG-KLDDGREIAVKKLSHSSNQGKKEFEN------EAKLLARVQH--RNV 108
LG GGFG V+ G ++ D +A+K + E N E LL +V V
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 109 VNLLGYCAHGAEKLLIYEY---------------VINESLDKVLFSLI-------KDIQI 146
+ LL + +LI E + E L + F + + +
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGV 164
Query: 147 LFRKKKTDIKASNILLD-DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYV-MH 204
L R DIK NIL+D ++ K+ DFG L + V T GT Y PE++ H
Sbjct: 165 LHR----DIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYH 217
Query: 205 GHLSVKADVFSFGVVIL-------------ELISGQRNSSFNLDVDAQNLLDWAYKLYKK 251
+ A V+S G+++ E+I GQ + + Q+L+ W L
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCLALRPS 277
Query: 252 DK 253
D+
Sbjct: 278 DR 279
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 90/204 (44%), Gaps = 34/204 (16%)
Query: 58 LGEGGFGPVFKGKLDDG-REIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCA 116
LG GG G VF +D + +A+KK+ + Q K E K++ R+ H N+V +
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 117 HGAEKL---------LIYEYVINESLDK------------------VLFSLIKDIQILFR 149
+L L Y++ E ++ ++ L++ ++ +
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKYIHS 138
Query: 150 KK--KTDIKASNILLD-DKWIPKIADFGMARLFPEDQTHVNTRVAG--TNGYMAPEYVMH 204
D+K +N+ ++ + + KI DFG+AR+ +H G T Y +P ++
Sbjct: 139 ANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLS 198
Query: 205 GHLSVKA-DVFSFGVVILELISGQ 227
+ KA D+++ G + E+++G+
Sbjct: 199 PNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 89/218 (40%), Gaps = 38/218 (17%)
Query: 41 PFEALVSATKNFHPSNKLGEGGFGPVFKGKLD-DGREIAVKKLSHSSNQGKKEFE----N 95
P + + + +F + LGEG +G V G +A+KK+ K F
Sbjct: 2 PKRIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD---KPLFALRTLR 58
Query: 96 EAKLLARVQHRNVVNLLGY----CAHGAEKLLIYEYVINESLDKVLFS-LIKDIQILFRK 150
E K+L +H N++ + ++ I + ++ L +V+ + ++ D I +
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFI 118
Query: 151 KKT---------------DIKASNILLDDKWIPKIADFGMARLF---------PEDQTHV 186
+T D+K SN+L++ K+ DFG+AR+ P Q
Sbjct: 119 YQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 187 NTRVAGTNGYMAPEYVM-HGHLSVKADVFSFGVVILEL 223
T T Y APE ++ S DV+S G ++ EL
Sbjct: 179 MTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 94/242 (38%), Gaps = 53/242 (21%)
Query: 58 LGEGGFGPVFKG-KLDDGREIAVKKLSHSSNQGKKEFEN------EAKLLARVQH--RNV 108
LG GGFG V+ G ++ D +A+K + E N E LL +V V
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 109 VNLLGYCAHGAEKLLIYEY---------------VINESLDKVLFSLI-------KDIQI 146
+ LL + +LI E + E L + F + + +
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGV 163
Query: 147 LFRKKKTDIKASNILLD-DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYV-MH 204
L R DIK NIL+D ++ K+ DFG L + V T GT Y PE++ H
Sbjct: 164 LHR----DIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYH 216
Query: 205 GHLSVKADVFSFGVVIL-------------ELISGQRNSSFNLDVDAQNLLDWAYKLYKK 251
+ A V+S G+++ E+I GQ + + Q+L+ W L
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCLALRPS 276
Query: 252 DK 253
D+
Sbjct: 277 DR 278
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 90/195 (46%), Gaps = 28/195 (14%)
Query: 57 KLGEGGFGPVFKG-KLDDGREIAVKKLSHS--SNQGKKEFENEAKLLARVQHRNVVNLLG 113
+LG+G F V + K+ G+E A K ++ S + ++ E EA++ ++H N+V L
Sbjct: 29 ELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 88
Query: 114 YCAHGAEKLLIYEYVI-------------------NESLDKVLFSLIKDIQILFRKKKTD 154
+ LI++ V + + ++L +++ Q+ + D
Sbjct: 89 SISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHR--D 146
Query: 155 IKASNILLDDKW---IPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKA 211
+K N+LL K K+ADFG+A + E + AGT GY++PE +
Sbjct: 147 LKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPV 205
Query: 212 DVFSFGVVILELISG 226
D+++ GV++ L+ G
Sbjct: 206 DLWACGVILYILLVG 220
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 94/242 (38%), Gaps = 53/242 (21%)
Query: 58 LGEGGFGPVFKG-KLDDGREIAVKKLSHSSNQGKKEFEN------EAKLLARVQH--RNV 108
LG GGFG V+ G ++ D +A+K + E N E LL +V V
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 109 VNLLGYCAHGAEKLLIYEY---------------VINESLDKVLFSLI-------KDIQI 146
+ LL + +LI E + E L + F + + +
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGV 164
Query: 147 LFRKKKTDIKASNILLD-DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYV-MH 204
L R DIK NIL+D ++ K+ DFG L + V T GT Y PE++ H
Sbjct: 165 LHR----DIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYH 217
Query: 205 GHLSVKADVFSFGVVIL-------------ELISGQRNSSFNLDVDAQNLLDWAYKLYKK 251
+ A V+S G+++ E+I GQ + + Q+L+ W L
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCLALRPS 277
Query: 252 DK 253
D+
Sbjct: 278 DR 279
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 84/198 (42%), Gaps = 28/198 (14%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQHR 106
+N P +G + LD R +A+KKLS + K+ + E L+ V H+
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHK 83
Query: 107 NVVNLLG-YCAHGAEKLLIYEYVINESLDKVLFSLIKD-----------IQILFRKKKT- 153
N+++LL + + Y++ E +D L +I+ Q+L K
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 154 -------DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
D+K SNI++ KI DFG+AR + + T T Y APE ++
Sbjct: 144 SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 207 LSVKADVFSFGVVILELI 224
D++S G ++ E++
Sbjct: 202 YKENVDIWSVGCIMGEMV 219
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 28/198 (14%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQHR 106
+N P +G + LD R +A+KKLS + K+ + E L+ V H+
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 83
Query: 107 NVVNLLGYCA------HGAEKLLIYEY-------VINESLDK-----VLFSLIKDIQILF 148
N+++LL + L+ E VI LD +L+ ++ I+ L
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLH 143
Query: 149 RKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
D+K SNI++ KI DFG+AR + + T T Y APE ++
Sbjct: 144 SAGIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 207 LSVKADVFSFGVVILELI 224
D++S G ++ E++
Sbjct: 202 YKENVDIWSVGCIMGEMV 219
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 28/198 (14%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQHR 106
+N P +G + LD R +A+KKLS + K+ + E L+ V H+
Sbjct: 20 QNLKPIGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 76
Query: 107 NVVNLLGYCA------HGAEKLLIYEY-------VINESLDK-----VLFSLIKDIQILF 148
N+++LL + L+ E VI LD +L+ ++ I+ L
Sbjct: 77 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLH 136
Query: 149 RKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
D+K SNI++ KI DFG+AR + + T T Y APE ++
Sbjct: 137 SAGIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMG 194
Query: 207 LSVKADVFSFGVVILELI 224
D++S G ++ E++
Sbjct: 195 YKENVDIWSVGCIMGEMV 212
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 122/298 (40%), Gaps = 56/298 (18%)
Query: 16 NLGSSREGDNEEDLEKIAAREQKHFPFEALVSATKN------FHPSNKLGEGGFGPVFKG 69
N ++++G +E +++ A+ ++ F + + ++N F LG G FG V
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDF-LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLV 60
Query: 70 KL-DDGREIAVKKLSHSSNQGKKEFE---NEAKLLARVQHRNVVNLLGYCAHGAEKLLIY 125
K + G A+K L K+ E NE ++L V +V L + ++
Sbjct: 61 KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 126 EYVINESLDKVL---------------------FSLIKDIQILFRKKKTDIKASNILLDD 164
EYV + L F + + +++R D+K N+L+D
Sbjct: 121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR----DLKPENLLIDQ 176
Query: 165 KWIPKIADFGMARLFPEDQTHVNTR---VAGTNGYMAPEYVMHGHLSVKADVFSFGVVIL 221
+ ++ DFG A+ V R + GT +APE ++ + D ++ GV+I
Sbjct: 177 QGYIQVTDFGFAK-------RVKGRTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIY 229
Query: 222 ELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIGL 279
E+ +G F D Q +Y+K S ++ PS +SD D + +Q+ L
Sbjct: 230 EMAAGY--PPFFADQPIQ--------IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDL 277
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 89/207 (42%), Gaps = 32/207 (15%)
Query: 47 SATKNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLSHS--SNQGKKEFENEAKLLARV 103
S T + +LG+G F V + K+ G+E A K ++ S + ++ E EA++ +
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 104 QHRNVVNLLGYCAHGAEKLLIY---------------EYVINESLDKVLFSLIKDIQ--- 145
+H N+V L + L++ EY + +++ +
Sbjct: 61 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCH 120
Query: 146 ---ILFRKKKTDIKASNILLDDK---WIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAP 199
I+ R D+K N+LL K K+ADFG+A DQ AGT GY++P
Sbjct: 121 LNGIVHR----DLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ-QAWFGFAGTPGYLSP 175
Query: 200 EYVMHGHLSVKADVFSFGVVILELISG 226
E + D+++ GV++ L+ G
Sbjct: 176 EVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 84/198 (42%), Gaps = 28/198 (14%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQHR 106
+N P +G + LD R +A+KKLS + K+ + E L+ V H+
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHK 83
Query: 107 NVVNLLG-YCAHGAEKLLIYEYVINESLDKVLFSLIKD-----------IQILFRKKKT- 153
N+++LL + + Y++ E +D L +I+ Q+L K
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 154 -------DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
D+K SNI++ KI DFG+AR + + T T Y APE ++
Sbjct: 144 SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 207 LSVKADVFSFGVVILELI 224
D++S G ++ E++
Sbjct: 202 YKENVDIWSVGCIMGEMV 219
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 89/218 (40%), Gaps = 38/218 (17%)
Query: 41 PFEALVSATKNFHPSNKLGEGGFGPVFKGKLD-DGREIAVKKLSHSSNQGKKEFE----N 95
P + + + +F + LGEG +G V G +A+KK+ K F
Sbjct: 2 PKRIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD---KPLFALRTLR 58
Query: 96 EAKLLARVQHRNVVNLLGY----CAHGAEKLLIYEYVINESLDKVLFS-LIKDIQILFRK 150
E K+L +H N++ + ++ I + ++ L +V+ + ++ D I +
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFI 118
Query: 151 KKT---------------DIKASNILLDDKWIPKIADFGMARLF---------PEDQTHV 186
+T D+K SN+L++ K+ DFG+AR+ P Q
Sbjct: 119 YQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 187 NTRVAGTNGYMAPEYVM-HGHLSVKADVFSFGVVILEL 223
T T Y APE ++ S DV+S G ++ EL
Sbjct: 179 MTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 95/242 (39%), Gaps = 53/242 (21%)
Query: 58 LGEGGFGPVFKG-KLDDGREIAVKKLSHSSNQGKKEFEN------EAKLLARVQ--HRNV 108
LG GGFG V+ G ++ D +A+K + E N E LL +V V
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 74
Query: 109 VNLLGYCAHGAEKLLIYEY---------------VINESLDKVLFSLI-------KDIQI 146
+ LL + +LI E + E L + F + + +
Sbjct: 75 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGV 134
Query: 147 LFRKKKTDIKASNILLD-DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYV-MH 204
L R DIK NIL+D ++ K+ DFG L + V T GT Y PE++ H
Sbjct: 135 LHR----DIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYH 187
Query: 205 GHLSVKADVFSFGVVILELISGQ----------RNSSF---NLDVDAQNLLDWAYKLYKK 251
+ A V+S G+++ +++ G R F + + Q+L+ W L
Sbjct: 188 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPS 247
Query: 252 DK 253
D+
Sbjct: 248 DR 249
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 88/203 (43%), Gaps = 24/203 (11%)
Query: 47 SATKNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLSHS--SNQGKKEFENEAKLLARV 103
S T + +LG+G F V + K+ G+E A K ++ S + ++ E EA++ +
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 104 QHRNVVNLLGYCAHGAEKLLIYEYVINESL--DKVLFSLIKDI-------QILFRKKKT- 153
+H N+V L + L+++ V L D V + QIL
Sbjct: 61 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCH 120
Query: 154 -------DIKASNILLDDK---WIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVM 203
D+K N+LL K K+ADFG+A DQ AGT GY++PE +
Sbjct: 121 LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ-QAWFGFAGTPGYLSPEVLR 179
Query: 204 HGHLSVKADVFSFGVVILELISG 226
D+++ GV++ L+ G
Sbjct: 180 KDPYGKPVDMWACGVILYILLVG 202
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 89/198 (44%), Gaps = 34/198 (17%)
Query: 56 NKLGEGGFGPVFKGKLD-DGREIAVKKLSHSSNQG-------KKEFENEAKLLARVQHRN 107
+ LG G FG V G+ G ++AVK L+ + K+E +N L +H +
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQN----LKLFRHPH 72
Query: 108 VVNLLGYCAHGAEKLLIYEYV--------------INESLDKVLFS-LIKDIQILFRKKK 152
++ L + + ++ EYV + E + LF ++ + R
Sbjct: 73 IIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMV 132
Query: 153 T--DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSV- 209
D+K N+LLD KIADFG++ + + + ++ G+ Y APE V+ G L
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDS--CGSPNYAAPE-VISGRLYAG 189
Query: 210 -KADVFSFGVVILELISG 226
+ D++S GV++ L+ G
Sbjct: 190 PEVDIWSCGVILYALLCG 207
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 95/242 (39%), Gaps = 53/242 (21%)
Query: 58 LGEGGFGPVFKG-KLDDGREIAVKKLSHSSNQGKKEFEN------EAKLLARVQ--HRNV 108
LG GGFG V+ G ++ D +A+K + E N E LL +V V
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 109 VNLLGYCAHGAEKLLIYEY---------------VINESLDKVLFSLI-------KDIQI 146
+ LL + +LI E + E L + F + + +
Sbjct: 72 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGV 131
Query: 147 LFRKKKTDIKASNILLD-DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYV-MH 204
L R DIK NIL+D ++ K+ DFG L + V T GT Y PE++ H
Sbjct: 132 LHR----DIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYH 184
Query: 205 GHLSVKADVFSFGVVILELISGQ----------RNSSF---NLDVDAQNLLDWAYKLYKK 251
+ A V+S G+++ +++ G R F + + Q+L+ W L
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPS 244
Query: 252 DK 253
D+
Sbjct: 245 DR 246
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 88/198 (44%), Gaps = 34/198 (17%)
Query: 56 NKLGEGGFGPVFKGKLD-DGREIAVKKLSHSSNQG-------KKEFENEAKLLARVQHRN 107
+ LG G FG V G+ G ++AVK L+ + K+E +N L +H +
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQN----LKLFRHPH 72
Query: 108 VVNLLGYCAHGAEKLLIYEYV--------------INESLDKVLFS-LIKDIQILFRKKK 152
++ L + + ++ EYV + E + LF ++ + R
Sbjct: 73 IIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMV 132
Query: 153 T--DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSV- 209
D+K N+LLD KIADFG++ + D + T G+ Y APE V+ G L
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLSNMM-SDGEFLRTS-CGSPNYAAPE-VISGRLYAG 189
Query: 210 -KADVFSFGVVILELISG 226
+ D++S GV++ L+ G
Sbjct: 190 PEVDIWSCGVILYALLCG 207
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 94/242 (38%), Gaps = 53/242 (21%)
Query: 58 LGEGGFGPVFKG-KLDDGREIAVKKLSHSSNQGKKEFEN------EAKLLARVQ--HRNV 108
LG GGFG V+ G ++ D +A+K + E N E LL +V V
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 109 VNLLGYCAHGAEKLLIYEY---------------VINESLDKVLFSLI-------KDIQI 146
+ LL + +LI E + E L + F + + +
Sbjct: 72 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGV 131
Query: 147 LFRKKKTDIKASNILLD-DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYV-MH 204
L R DIK NIL+D ++ K+ DFG L + V T GT Y PE++ H
Sbjct: 132 LHR----DIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYH 184
Query: 205 GHLSVKADVFSFGVVIL-------------ELISGQRNSSFNLDVDAQNLLDWAYKLYKK 251
+ A V+S G+++ E+I GQ + + Q+L+ W L
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCLALRPS 244
Query: 252 DK 253
D+
Sbjct: 245 DR 246
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 95/242 (39%), Gaps = 53/242 (21%)
Query: 58 LGEGGFGPVFKG-KLDDGREIAVKKLSHSSNQGKKEFEN------EAKLLARVQ--HRNV 108
LG GGFG V+ G ++ D +A+K + E N E LL +V V
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 109 VNLLGYCAHGAEKLLIYEY---------------VINESLDKVLFSLI-------KDIQI 146
+ LL + +LI E + E L + F + + +
Sbjct: 72 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNXGV 131
Query: 147 LFRKKKTDIKASNILLD-DKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYV-MH 204
L R DIK NIL+D ++ K+ DFG L + V T GT Y PE++ H
Sbjct: 132 LHR----DIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYH 184
Query: 205 GHLSVKADVFSFGVVILELISGQ----------RNSSF---NLDVDAQNLLDWAYKLYKK 251
+ A V+S G+++ +++ G R F + + Q+L+ W L
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCLALRPS 244
Query: 252 DK 253
D+
Sbjct: 245 DR 246
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 85/201 (42%), Gaps = 28/201 (13%)
Query: 50 KNFHPSNKLGEGGFGPV-FKGKLDDGREIAVKKLSHSS-NQGKKEFENEAKLLARVQHRN 107
K + +G GGF V + G +A+K + ++ + E + L ++H++
Sbjct: 10 KYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQH 69
Query: 108 VVNL-------------LGYCAHGAEKLLIYEYVIN-----ESLDKVLFSLIKDIQILFR 149
+ L L YC G +++Y+I+ E +V+F I
Sbjct: 70 ICQLYHVLETANKIFMVLEYCPGGE----LFDYIISQDRLSEEETRVVFRQIVSAVAYVH 125
Query: 150 KK---KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVM-HG 205
+ D+K N+L D+ K+ DFG+ ++ + G+ Y APE +
Sbjct: 126 SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKS 185
Query: 206 HLSVKADVFSFGVVILELISG 226
+L +ADV+S G+++ L+ G
Sbjct: 186 YLGSEADVWSMGILLYVLMCG 206
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 34/206 (16%)
Query: 49 TKNFHPSNKLGEGGFGPVFKG-KLDDGREIA-----VKKLSHSSNQGKKEFENEAKLLAR 102
T+ + +LG+G F V + K+ G+E A KKLS +Q + E EA++
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQ---KLEREARICRL 66
Query: 103 VQHRNVVNLLGYCAHGAEKLLIYEYVI-------------------NESLDKVLFSLIKD 143
++H N+V L + LI++ V + + ++L +++
Sbjct: 67 LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHC 126
Query: 144 IQILFRKKKTDIKASNILLDDKW---IPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPE 200
Q+ + ++K N+LL K K+ADFG+A + E + AGT GY++PE
Sbjct: 127 HQMGVVHR--NLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYLSPE 183
Query: 201 YVMHGHLSVKADVFSFGVVILELISG 226
+ D+++ GV++ L+ G
Sbjct: 184 VLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 83/205 (40%), Gaps = 35/205 (17%)
Query: 51 NFHPSNKLGEGGFGPVFKGKL-DDGREIAVKKLSHSSNQGKKEFE---NEAKLLARVQHR 106
NF LG+G FG V ++ + G AVK L + E E ++L+ ++
Sbjct: 24 NFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNH 83
Query: 107 NVVNLLGYCAHGAEKLLIYEYVIN------------------------ESLDKVLFSLIK 142
+ L C ++L +N E + ++F +
Sbjct: 84 PFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMF--LH 141
Query: 143 DIQILFRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYV 202
D I++R D+K N+LLD + K+ADFGM + + T GT Y+APE +
Sbjct: 142 DKGIIYR----DLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTAT-FCGTPDYIAPEIL 196
Query: 203 MHGHLSVKADVFSFGVVILELISGQ 227
D ++ GV++ E++ G
Sbjct: 197 QEMLYGPAVDWWAMGVLLYEMLCGH 221
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 76/160 (47%), Gaps = 37/160 (23%)
Query: 92 EFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESL---DKVLFSLIKD----- 143
+F+NE +++ +++ + G + E +IYEY+ N+S+ D+ F L K+
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 144 -IQILFRKKKT-----------------DIKASNILLDDKWIPKIADFGMARLFPEDQTH 185
IQ++ K+ D+K SNIL+D K++DFG E +
Sbjct: 149 PIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFG------ESEYM 202
Query: 186 VNTRVAGTNG---YMAPEYVMH--GHLSVKADVFSFGVVI 220
V+ ++ G+ G +M PE+ + + K D++S G+ +
Sbjct: 203 VDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 84/199 (42%), Gaps = 28/199 (14%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQHR 106
+N P +G + L+ R +A+KKLS + K+ + E L+ V H+
Sbjct: 32 QNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 88
Query: 107 NVVNLLG-YCAHGAEKLLIYEYVINESLDKVLFSLIKD-----------IQILFRKKKT- 153
N++ LL + + + Y++ E +D L +I+ Q+L K
Sbjct: 89 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 148
Query: 154 -------DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
D+K SNI++ KI DFG+AR + + T T Y APE ++
Sbjct: 149 SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMG 206
Query: 207 LSVKADVFSFGVVILELIS 225
D++S G ++ E++
Sbjct: 207 YKENVDLWSVGCIMGEMVC 225
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 109/273 (39%), Gaps = 40/273 (14%)
Query: 51 NFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFEN----EAKLLARVQHR 106
+F LG+G FG V+ + I K+ S K+ E+ E ++ A + H
Sbjct: 24 DFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHP 83
Query: 107 NVVNLLGYCAHGAEKLLIYEY--------------VINESLDKVLFSLIKDIQILFRKKK 152
N++ L Y LI EY +E + + D + KK
Sbjct: 84 NILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKK 143
Query: 153 T---DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSV 209
DIK N+LL K KIADFG + P + + GT Y+ PE + +
Sbjct: 144 VIHRDIKPENLLLGLKGELKIADFGWSVHAPSLR---RKTMCGTLDYLPPEMIEGRMHNE 200
Query: 210 KADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGD 269
K D++ GV+ EL+ G N F + + N + Y++ +++ P+ + + D
Sbjct: 201 KVDLWCIGVLCYELLVG--NPPF--ESASHN------ETYRRIVKVDLKFPASVPTGAQD 250
Query: 270 QIAMCI------QIGLLCTQGDPQLRPTMRRVV 296
I+ + ++ L P +R RRV+
Sbjct: 251 LISKLLRHNPSERLPLAQVSAHPWVRANSRRVL 283
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 79/191 (41%), Gaps = 22/191 (11%)
Query: 58 LGEGGFGPVFKGKLDDGREIAVKKLSHSS----NQGKKEFENEAKLLARVQHRNVVNLLG 113
LG+GGF ++ D +E+ K+ S K++ E + + + +VV G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 114 YCAHGAEKLLIYEYVINESLDKV---------------LFSLIKDIQILF--RKKKTDIK 156
+ ++ E SL ++ + I+ +Q L R D+K
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLK 169
Query: 157 ASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSF 216
N+ L+D KI DFG+A D + GT Y+APE + S + D++S
Sbjct: 170 LGNLFLNDDMDVKIGDFGLATKIEFDGER-KKXLCGTPNYIAPEVLCKKGHSFEVDIWSL 228
Query: 217 GVVILELISGQ 227
G ++ L+ G+
Sbjct: 229 GCILYTLLVGK 239
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 88/210 (41%), Gaps = 25/210 (11%)
Query: 40 FPFEALVSATKNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLSHS--SNQGKKEFENE 96
F A + N+ +LG+G F V + G E A K ++ S + ++ E E
Sbjct: 19 FMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLERE 78
Query: 97 AKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESL---------------DKVLFSLI 141
A++ ++QH N+V L + L+++ V L + ++
Sbjct: 79 ARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL 138
Query: 142 KDIQILFRKK--KTDIKASNILLDDKW---IPKIADFGMARLFPEDQTHVNTRVAGTNGY 196
+ I ++K N+LL K K+ADFG+A + + AGT GY
Sbjct: 139 ESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGY 196
Query: 197 MAPEYVMHGHLSVKADVFSFGVVILELISG 226
++PE + S D+++ GV++ L+ G
Sbjct: 197 LSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 79/191 (41%), Gaps = 22/191 (11%)
Query: 58 LGEGGFGPVFKGKLDDGREIAVKKLSHSSN----QGKKEFENEAKLLARVQHRNVVNLLG 113
LG+GGF ++ D +E+ K+ S K++ E + + + +VV G
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 114 YCAHGAEKLLIYEYVINESLDKV---------------LFSLIKDIQILF--RKKKTDIK 156
+ ++ E SL ++ + I+ +Q L R D+K
Sbjct: 94 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLK 153
Query: 157 ASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSF 216
N+ L+D KI DFG+A D + GT Y+APE + S + D++S
Sbjct: 154 LGNLFLNDDMDVKIGDFGLATKIEFDGER-KKDLCGTPNYIAPEVLCKKGHSFEVDIWSL 212
Query: 217 GVVILELISGQ 227
G ++ L+ G+
Sbjct: 213 GCILYTLLVGK 223
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 10/104 (9%)
Query: 127 YVINESLDKVLFSLIKDIQILFRKKKTDIKASNILL---DDKWIPKIADFGMARLFPEDQ 183
Y++ + + V S + D+ ++ R D+K N+L +D KI DFG ARL P D
Sbjct: 110 YIMRKLVSAV--SHMHDVGVVHR----DLKPENLLFTDENDNLEIKIIDFGFARLKPPDN 163
Query: 184 THVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVVILELISGQ 227
+ T T Y APE + D++S GV++ ++SGQ
Sbjct: 164 QPLKTPCF-TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQ 206
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 84/199 (42%), Gaps = 28/199 (14%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQHR 106
+N P +G + L+ R +A+KKLS + K+ + E L+ V H+
Sbjct: 21 QNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 77
Query: 107 NVVNLLG-YCAHGAEKLLIYEYVINESLDKVLFSLIKD-----------IQILFRKKKT- 153
N++ LL + + + Y++ E +D L +I+ Q+L K
Sbjct: 78 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 137
Query: 154 -------DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
D+K SNI++ KI DFG+AR + + T T Y APE ++
Sbjct: 138 SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMG 195
Query: 207 LSVKADVFSFGVVILELIS 225
D++S G ++ E++
Sbjct: 196 YKENVDLWSVGCIMGEMVC 214
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 79/191 (41%), Gaps = 22/191 (11%)
Query: 58 LGEGGFGPVFKGKLDDGREIAVKKLSHSS----NQGKKEFENEAKLLARVQHRNVVNLLG 113
LG+GGF ++ D +E+ K+ S K++ E + + + +VV G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 114 YCAHGAEKLLIYEYVINESLDKV---------------LFSLIKDIQILF--RKKKTDIK 156
+ ++ E SL ++ + I+ +Q L R D+K
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLK 169
Query: 157 ASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSF 216
N+ L+D KI DFG+A D + GT Y+APE + S + D++S
Sbjct: 170 LGNLFLNDDMDVKIGDFGLATKIEFDGER-KKDLCGTPNYIAPEVLCKKGHSFEVDIWSL 228
Query: 217 GVVILELISGQ 227
G ++ L+ G+
Sbjct: 229 GCILYTLLVGK 239
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 88/218 (40%), Gaps = 38/218 (17%)
Query: 41 PFEALVSATKNFHPSNKLGEGGFGPVFKGKLD-DGREIAVKKLSHSSNQGKKEFE----N 95
P + + + +F + LGEG +G V G +A+KK+ K F
Sbjct: 2 PKRIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD---KPLFALRTLR 58
Query: 96 EAKLLARVQHRNVVNLLGY----CAHGAEKLLIYEYVINESLDKVLFS-LIKDIQILFRK 150
E K+L +H N++ + ++ I + ++ L +V+ + ++ D I +
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFI 118
Query: 151 KKT---------------DIKASNILLDDKWIPKIADFGMARLF---------PEDQTHV 186
+T D+K SN+L++ K+ DFG+AR+ P Q
Sbjct: 119 YQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 187 NTRVAGTNGYMAPEYVM-HGHLSVKADVFSFGVVILEL 223
T Y APE ++ S DV+S G ++ EL
Sbjct: 179 MVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 97/244 (39%), Gaps = 53/244 (21%)
Query: 33 AAREQKHFPFEALVSATKNFHPSNKLGEGGFGPVFKGK-LDDGREIAVKKLSHSSNQGKK 91
+ R+Q F + + L EGGF V++ + + GRE A+K+L + + +
Sbjct: 11 SGRDQSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNR 70
Query: 92 EFENEAKLLARVQ-HRNVVNLLGYCAHG--------AEKLLIYEYVINESLD-------- 134
E + ++ H N+V + G AE LL+ E + ++
Sbjct: 71 AIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESR 130
Query: 135 ---------KVLFSLIKDIQILFRKK----KTDIKASNILLDDKWIPKIADFGMA----- 176
K+ + + +Q + R+K D+K N+LL ++ K+ DFG A
Sbjct: 131 GPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISH 190
Query: 177 ----------RLFPEDQTHVNTRVAGTNGYMAPEYV-MHGHLSV--KADVFSFGVVILEL 223
R E++ NT T Y PE + ++ + + K D+++ G ++ L
Sbjct: 191 YPDYSWSAQRRALVEEEITRNT----TPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLL 246
Query: 224 ISGQ 227
Q
Sbjct: 247 CFRQ 250
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 39/203 (19%)
Query: 58 LGEGGFGPVFKG-KLDDGREIAVK-----KLSHSSNQGKKEFENEAKLLARVQHRNVVNL 111
+G+G F V + + G++ AVK K + S ++ + EA + ++H ++V L
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 112 LGYCAHGAEKLLIYEY-----------------------VINESLDKVLFSL--IKDIQI 146
L + +++E+ V + + ++L +L D I
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNI 151
Query: 147 LFRKKKTDIKASNILLDDK--WIP-KIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVM 203
+ R D+K N+LL K P K+ DFG+A E RV GT +MAPE V
Sbjct: 152 IHR----DVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRV-GTPHFMAPEVVK 206
Query: 204 HGHLSVKADVFSFGVVILELISG 226
DV+ GV++ L+SG
Sbjct: 207 REPYGKPVDVWGCGVILFILLSG 229
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 72/154 (46%), Gaps = 22/154 (14%)
Query: 95 NEAKLLARVQHRNVVNLLGYCAHGAEK--LLIYEYV-------------INESLDKVLFS 139
E +L ++ H NVV L+ E +++E V ++E + F
Sbjct: 85 QEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQ 144
Query: 140 -LIKDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGY 196
LIK I+ L +K DIK SN+L+ + KIADFG++ F ++ V GT +
Sbjct: 145 DLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTV-GTPAF 203
Query: 197 MAPEYVMHGH--LSVKA-DVFSFGVVILELISGQ 227
MAPE + S KA DV++ GV + + GQ
Sbjct: 204 MAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 15/84 (17%)
Query: 154 DIKASNILLDDKWIPKIADFGMARLFPEDQ-------------THVNTRVAGTNGYMAPE 200
D+K SNI + K+ DFG+ +D+ TH GT YM+PE
Sbjct: 189 DLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQ--VGTKLYMSPE 246
Query: 201 YVMHGHLSVKADVFSFGVVILELI 224
+ + S K D+FS G+++ EL+
Sbjct: 247 QIHGNNYSHKVDIFSLGLILFELL 270
Score = 35.8 bits (81), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 51 NFHPSNKLGEGGFGPVF--KGKLDDGREIAVKKLSHSSNQ-GKKEFENEAKLLARVQHRN 107
+F P +G GGFG VF K K+DD A+K++ + + +++ E K LA+++H
Sbjct: 7 DFEPIQCMGRGGFGVVFEAKNKVDDCN-YAIKRIRLPNRELAREKVMREVKALAKLEHPG 65
Query: 108 VV 109
+V
Sbjct: 66 IV 67
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 86/201 (42%), Gaps = 25/201 (12%)
Query: 49 TKNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLSHS--SNQGKKEFENEAKLLARVQH 105
+ N+ +LG+G F V + G E A K ++ S + ++ E EA++ ++QH
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 106 RNVVNLLGYCAHGAEKLLIYEYVINESL---------------DKVLFSLIKDIQILFRK 150
N+V L + L+++ V L + +++ I
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN 123
Query: 151 K--KTDIKASNILLDDKW---IPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHG 205
++K N+LL K K+ADFG+A + + AGT GY++PE +
Sbjct: 124 GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKD 181
Query: 206 HLSVKADVFSFGVVILELISG 226
S D+++ GV++ L+ G
Sbjct: 182 PYSKPVDIWACGVILYILLVG 202
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 87/206 (42%), Gaps = 45/206 (21%)
Query: 58 LGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEF-ENEAKLLARVQHRNVVNLLG--- 113
+G+G FG V++GK G E+AVK S S + + F E E ++H N++ +
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKIFS--SREERSWFREAEIYQTVMLRHENILGFIAADN 106
Query: 114 --------------YCAHGAEKLLIYEYVIN-ESLDKVLFSLIKDIQILFRK-------- 150
Y HG+ + Y + E + K+ S + L +
Sbjct: 107 KDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP 166
Query: 151 --KKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHV----NTRVAGTNGYMAPEYVMH 204
D+K+ NIL+ IAD G+A + N RV GT YMAPE V+
Sbjct: 167 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV-GTKRYMAPE-VLD 224
Query: 205 GHLSVK-------ADVFSFGVVILEL 223
+++K AD+++ G+V E+
Sbjct: 225 DSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 98/237 (41%), Gaps = 81/237 (34%)
Query: 61 GGFGPVFKGK-LDDGREIAVKKLS--HSSN------------------QGKKEF----EN 95
GGF P FKG+ D R I V+KL H S +G K + E+
Sbjct: 5 GGFHPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAED 64
Query: 96 EAKLLARVQH-----------RNVVNLLGYCAH----GAEKLLIYEYVINESLDKVLFSL 140
E KLL RV +++ LL + H G ++++E V+ E+L +L
Sbjct: 65 EIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFE-VLGENL----LAL 119
Query: 141 IKD-----IQILFRKK-------------------KTDIKASNILLDDKWIP------KI 170
IK I +++ K+ TDIK N+L++ P KI
Sbjct: 120 IKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKI 179
Query: 171 ADFGMARLFPEDQTH-VNTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVVILELISG 226
AD G A + E T+ + TR Y +PE ++ AD++S +I ELI+G
Sbjct: 180 ADLGNACWYDEHYTNSIQTR-----EYRSPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 86/201 (42%), Gaps = 25/201 (12%)
Query: 49 TKNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLSHS--SNQGKKEFENEAKLLARVQH 105
+ N+ +LG+G F V + G E A K ++ S + ++ E EA++ ++QH
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 106 RNVVNLLGYCAHGAEKLLIYEYVINESL---------------DKVLFSLIKDIQILFRK 150
N+V L + L+++ V L + +++ I
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN 124
Query: 151 K--KTDIKASNILLDDKW---IPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHG 205
++K N+LL K K+ADFG+A + + AGT GY++PE +
Sbjct: 125 GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKD 182
Query: 206 HLSVKADVFSFGVVILELISG 226
S D+++ GV++ L+ G
Sbjct: 183 PYSKPVDIWACGVILYILLVG 203
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 92/211 (43%), Gaps = 27/211 (12%)
Query: 42 FEALVSATK---NFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLSHS--SNQGKKEFEN 95
F+ + + T+ ++ +LG+G F V + K +E A K ++ S + ++ E
Sbjct: 20 FQXMATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLER 79
Query: 96 EAKLLARVQHRNVVNLLGYCAHGAEKLLIY---------------EYVINESLDKVLFSL 140
EA++ ++H N+V L + L++ EY + +
Sbjct: 80 EARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQI 139
Query: 141 IKDIQILFRKK--KTDIKASNILLDDKW---IPKIADFGMARLFPEDQTHVNTRVAGTNG 195
++ + + + D+K N+LL K K+ADFG+A + + + AGT G
Sbjct: 140 LESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGEQQAWFGFAGTPG 198
Query: 196 YMAPEYVMHGHLSVKADVFSFGVVILELISG 226
Y++PE + D+++ GV++ L+ G
Sbjct: 199 YLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 87/206 (42%), Gaps = 45/206 (21%)
Query: 58 LGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEF-ENEAKLLARVQHRNVVNLLG--- 113
+G+G FG V++GK G E+AVK S S + + F E E ++H N++ +
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIFS--SREERSWFREAEIYQTVMLRHENILGFIAADN 93
Query: 114 --------------YCAHGAEKLLIYEYVIN-ESLDKVLFSLIKDIQILFRK-------- 150
Y HG+ + Y + E + K+ S + L +
Sbjct: 94 KDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP 153
Query: 151 --KKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHV----NTRVAGTNGYMAPEYVMH 204
D+K+ NIL+ IAD G+A + N RV GT YMAPE V+
Sbjct: 154 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV-GTKRYMAPE-VLD 211
Query: 205 GHLSVK-------ADVFSFGVVILEL 223
+++K AD+++ G+V E+
Sbjct: 212 DSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 86/201 (42%), Gaps = 25/201 (12%)
Query: 49 TKNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLSHS--SNQGKKEFENEAKLLARVQH 105
+ N+ +LG+G F V + G E A K ++ S + ++ E EA++ ++QH
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 106 RNVVNLLGYCAHGAEKLLIYEYVINESL---------------DKVLFSLIKDIQILFRK 150
N+V L + L+++ V L + +++ I
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN 124
Query: 151 K--KTDIKASNILLDDKW---IPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHG 205
++K N+LL K K+ADFG+A + + AGT GY++PE +
Sbjct: 125 GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKD 182
Query: 206 HLSVKADVFSFGVVILELISG 226
S D+++ GV++ L+ G
Sbjct: 183 PYSKPVDIWACGVILYILLVG 203
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 87/206 (42%), Gaps = 45/206 (21%)
Query: 58 LGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEF-ENEAKLLARVQHRNVVNLLG--- 113
+G+G FG V++GK G E+AVK S S + + F E E ++H N++ +
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIFS--SREERSWFREAEIYQTVMLRHENILGFIAADN 73
Query: 114 --------------YCAHGAEKLLIYEYVIN-ESLDKVLFSLIKDIQILFRK-------- 150
Y HG+ + Y + E + K+ S + L +
Sbjct: 74 KDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP 133
Query: 151 --KKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHV----NTRVAGTNGYMAPEYVMH 204
D+K+ NIL+ IAD G+A + N RV GT YMAPE V+
Sbjct: 134 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV-GTKRYMAPE-VLD 191
Query: 205 GHLSVK-------ADVFSFGVVILEL 223
+++K AD+++ G+V E+
Sbjct: 192 DSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 87/206 (42%), Gaps = 45/206 (21%)
Query: 58 LGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEF-ENEAKLLARVQHRNVVNLLG--- 113
+G+G FG V++GK G E+AVK S S + + F E E ++H N++ +
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFS--SREERSWFREAEIYQTVMLRHENILGFIAADN 67
Query: 114 --------------YCAHGAEKLLIYEYVIN-ESLDKVLFSLIKDIQILFRK-------- 150
Y HG+ + Y + E + K+ S + L +
Sbjct: 68 KDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP 127
Query: 151 --KKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHV----NTRVAGTNGYMAPEYVMH 204
D+K+ NIL+ IAD G+A + N RV GT YMAPE V+
Sbjct: 128 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV-GTKRYMAPE-VLD 185
Query: 205 GHLSVK-------ADVFSFGVVILEL 223
+++K AD+++ G+V E+
Sbjct: 186 DSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 81/191 (42%), Gaps = 26/191 (13%)
Query: 58 LGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAH 117
LG G FG V + ++ + K + + E +L +HRN+++L
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFES 72
Query: 118 GAEKLLIYEYV----INESLDKVLFSL------------IKDIQILFRKK--KTDIKASN 159
E ++I+E++ I E ++ F L + +Q L DI+ N
Sbjct: 73 MEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPEN 132
Query: 160 ILLDDKW--IPKIADFGMAR-LFPEDQTHVNTRVAGTN-GYMAPEYVMHGHLSVKADVFS 215
I+ + KI +FG AR L P D N R+ T Y APE H +S D++S
Sbjct: 133 IIYQTRRSSTIKIIEFGQARQLKPGD----NFRLLFTAPEYYAPEVHQHDVVSTATDMWS 188
Query: 216 FGVVILELISG 226
G ++ L+SG
Sbjct: 189 LGTLVYVLLSG 199
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 87/206 (42%), Gaps = 45/206 (21%)
Query: 58 LGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEF-ENEAKLLARVQHRNVVNLLG--- 113
+G+G FG V++GK G E+AVK S S + + F E E ++H N++ +
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIFS--SREERSWFREAEIYQTVMLRHENILGFIAADN 70
Query: 114 --------------YCAHGAEKLLIYEYVIN-ESLDKVLFSLIKDIQILFRK-------- 150
Y HG+ + Y + E + K+ S + L +
Sbjct: 71 KDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP 130
Query: 151 --KKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHV----NTRVAGTNGYMAPEYVMH 204
D+K+ NIL+ IAD G+A + N RV GT YMAPE V+
Sbjct: 131 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV-GTKRYMAPE-VLD 188
Query: 205 GHLSVK-------ADVFSFGVVILEL 223
+++K AD+++ G+V E+
Sbjct: 189 DSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 47/207 (22%)
Query: 58 LGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARV--QHRNVVNLLG-- 113
+G+G FG V++GK G E+AVK S ++ ++ + EA++ V +H N++ +
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAAD 67
Query: 114 ---------------YCAHGAEKLLIYEYVIN-ESLDKVLFSLIKDIQILFRK------- 150
Y HG+ + Y + E + K+ S + L +
Sbjct: 68 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 127
Query: 151 ---KKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHV----NTRVAGTNGYMAPEYVM 203
D+K+ NIL+ IAD G+A + N RV GT YMAPE V+
Sbjct: 128 PAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV-GTKRYMAPE-VL 185
Query: 204 HGHLSVK-------ADVFSFGVVILEL 223
+++K AD+++ G+V E+
Sbjct: 186 DDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 76/177 (42%), Gaps = 35/177 (19%)
Query: 76 EIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINES--- 132
E AVK + S +E E LL QH N++ L G Y YV+ E
Sbjct: 49 EFAVKIIDKSKRDPTEEIE---ILLRYGQHPNIITLKDVYDDGK-----YVYVVTELMKG 100
Query: 133 ---LDKVL----FSLIKDIQILFRKKKT------------DIKASNIL-LDDKWIP---K 169
LDK+L FS + +LF KT D+K SNIL +D+ P +
Sbjct: 101 GELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIR 160
Query: 170 IADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVVILELISG 226
I DFG A+ + + T N ++APE + D++S GV++ +++G
Sbjct: 161 ICDFGFAKQLRAENGLLMTPCYTAN-FVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 14/82 (17%)
Query: 154 DIKASNILLDDKWIPKIADFGMARLF----PEDQTHVNTRVAGTNGYMAPEYVMHGHLS- 208
D K+ N+LL +ADFG+A F P TH GT YMAPE V+ G ++
Sbjct: 148 DFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQV---GTRRYMAPE-VLEGAINF 203
Query: 209 -----VKADVFSFGVVILELIS 225
++ D+++ G+V+ EL+S
Sbjct: 204 QRDAFLRIDMYAMGLVLWELVS 225
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 95/215 (44%), Gaps = 28/215 (13%)
Query: 57 KLGEGGFGPVFKG-KLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYC 115
+LG G FG V + + GR K ++ K +NE ++ ++ H ++NL
Sbjct: 58 ELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAF 117
Query: 116 AHGAEKLLIYEYVI-NESLDKVL---FSLIKDIQILFRKKKT--------------DIKA 157
E +LI E++ E D++ + + + I + ++ DIK
Sbjct: 118 EDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKP 177
Query: 158 SNILLDDKWIP--KIADFGMA-RLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVF 214
NI+ + K KI DFG+A +L P++ V T T + APE V + D++
Sbjct: 178 ENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT---ATAEFAAPEIVDREPVGFYTDMW 234
Query: 215 SFGVVILELISGQRNSSFNLDVDA-QNL--LDWAY 246
+ GV+ L+SG + D++ QN+ DW +
Sbjct: 235 AIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEF 269
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 154 DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVM-----HGHLS 208
DIK NIL+D ++ADFG ED T ++ GT Y++PE + G
Sbjct: 200 DIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYG 259
Query: 209 VKADVFSFGVVILELISGQ 227
+ D +S GV + E++ G+
Sbjct: 260 PECDWWSLGVCMYEMLYGE 278
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 78/197 (39%), Gaps = 24/197 (12%)
Query: 51 NFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFEN----EAKLLARVQHR 106
+F LG+G FG V+ + + I K+ S K+ E+ E ++ + ++H
Sbjct: 16 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 75
Query: 107 NVVNLLGYCAHGAEKLLIYEYV--------------INESLDKVLFSLIKDIQILFRKKK 152
N++ + Y L+ E+ +E + D ++K
Sbjct: 76 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK 135
Query: 153 T---DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSV 209
DIK N+L+ K KIADFG + P + + GT Y+ PE +
Sbjct: 136 VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR---RRXMCGTLDYLPPEMIEGKTHDE 192
Query: 210 KADVFSFGVVILELISG 226
K D++ GV+ E + G
Sbjct: 193 KVDLWCAGVLCYEFLVG 209
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 78/197 (39%), Gaps = 24/197 (12%)
Query: 51 NFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFEN----EAKLLARVQHR 106
+F LG+G FG V+ + + I K+ S K+ E+ E ++ + ++H
Sbjct: 15 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 74
Query: 107 NVVNLLGYCAHGAEKLLIYEYV--------------INESLDKVLFSLIKDIQILFRKKK 152
N++ + Y L+ E+ +E + D ++K
Sbjct: 75 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK 134
Query: 153 T---DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSV 209
DIK N+L+ K KIADFG + P + + GT Y+ PE +
Sbjct: 135 VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR---RRXMCGTLDYLPPEMIEGKTHDE 191
Query: 210 KADVFSFGVVILELISG 226
K D++ GV+ E + G
Sbjct: 192 KVDLWCAGVLCYEFLVG 208
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 12/100 (12%)
Query: 136 VLFSLIKDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMA-RLFPEDQTHVNTRVAG 192
++ SL++ + L D+K NILLDD +++DFG + L P ++ + G
Sbjct: 205 IMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLR---ELCG 261
Query: 193 TNGYMAPEYV------MHGHLSVKADVFSFGVVILELISG 226
T GY+APE + H + D+++ GV++ L++G
Sbjct: 262 TPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 27/197 (13%)
Query: 52 FHPSNKLGEGGFGPVFKGKLDDGRE-IAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVN 110
F ++LG G V++ K ++ A+K L + + KK E +L R+ H N++
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVD--KKIVRTEIGVLLRLSHPNIIK 112
Query: 111 LLGYCAHGAEKLLIYEYVIN-ESLDKVL----FS----------LIKDIQILFRKKKT-- 153
L E L+ E V E D+++ +S +++ + L
Sbjct: 113 LKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHR 172
Query: 154 DIKASNILLDDKWIP----KIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSV 209
D+K N+L P KIADFG++++ E Q + T V GT GY APE +
Sbjct: 173 DLKPENLLYATP-APDAPLKIADFGLSKIV-EHQVLMKT-VCGTPGYCAPEILRGCAYGP 229
Query: 210 KADVFSFGVVILELISG 226
+ D++S G++ L+ G
Sbjct: 230 EVDMWSVGIITYILLCG 246
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 76/190 (40%), Gaps = 24/190 (12%)
Query: 58 LGEGGFGPVFKGKLDDGREIAVKKLSHSSNQGKKEFEN----EAKLLARVQHRNVVNLLG 113
LG+G FG V+ + + I K+ S K+ E+ E ++ + ++H N++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 114 YCAHGAEKLLIYEYV--------------INESLDKVLFSLIKDIQILFRKKKT---DIK 156
Y L+ E+ +E + D ++K DIK
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIK 141
Query: 157 ASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSF 216
N+L+ K KIADFG + P + + GT Y+ PE + K D++
Sbjct: 142 PENLLMGYKGELKIADFGWSVHAPSLR---RRXMCGTLDYLPPEMIEGKTHDEKVDLWCA 198
Query: 217 GVVILELISG 226
GV+ E + G
Sbjct: 199 GVLCYEFLVG 208
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 34/203 (16%)
Query: 51 NFHPSNKLGEGGFGPVFKGK-LDDGREIAVKKLSHSSN-QGKKEFENEAKLLAR-VQHRN 107
+ P +LG G +G V K + + G+ AVK++ + N Q +K + + R V
Sbjct: 35 DLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPF 94
Query: 108 VVNLLG---------YCAHGAEKLL--IYEYVINES-------LDKVLFSLIKDIQILFR 149
V G C + L Y+ VI++ L K+ S++K ++ L
Sbjct: 95 TVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS 154
Query: 150 KKKT---DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRV-AGTNGYMAPEYV--- 202
K D+K SN+L++ K DFG++ +D V + AG Y APE +
Sbjct: 155 KLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDD---VAKDIDAGCKPYXAPERINPE 211
Query: 203 --MHGHLSVKADVFSFGVVILEL 223
G+ SVK+D++S G+ +EL
Sbjct: 212 LNQKGY-SVKSDIWSLGITXIEL 233
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 83/199 (41%), Gaps = 28/199 (14%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQHR 106
+N P +G + L+ R +A+KKLS + K+ + E L+ V H+
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 83
Query: 107 NVVNLLG-YCAHGAEKLLIYEYVINESLDKVLFSLIKD-----------IQILFRKKKT- 153
N++ LL + + + Y++ E +D L +I+ Q+L K
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 154 -------DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
D+K SNI++ KI DFG+AR + + T Y APE ++
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMEPEVVTRYYRAPEVILGMG 201
Query: 207 LSVKADVFSFGVVILELIS 225
D++S G ++ E++
Sbjct: 202 YKENVDIWSVGCIMGEMVC 220
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 36/73 (49%)
Query: 154 DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADV 213
D+K NIL+ + DFG+A +++ GT Y APE H + +AD+
Sbjct: 159 DVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRADI 218
Query: 214 FSFGVVILELISG 226
++ V+ E ++G
Sbjct: 219 YALTCVLYECLTG 231
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 82/195 (42%), Gaps = 32/195 (16%)
Query: 57 KLGEGGFGPVFKGKLDD---GREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLG 113
+LG G FG V + ++D G + AVKK+ + + E A + +V L G
Sbjct: 100 RLGRGSFGEVHR--MEDKQTGFQCAVKKVRLEVFRAE-----ELMACAGLTSPRIVPLYG 152
Query: 114 YCAHGAEKLLIYEYVINESL------------DKVLFSL---IKDIQILFRKK--KTDIK 156
G + E + SL D+ L+ L ++ ++ L ++ D+K
Sbjct: 153 AVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVK 212
Query: 157 ASNILLD-DKWIPKIADFGMARLFPED----QTHVNTRVAGTNGYMAPEYVMHGHLSVKA 211
A N+LL D + DFG A D + GT +MAPE V+ K
Sbjct: 213 ADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKV 272
Query: 212 DVFSFGVVILELISG 226
DV+S ++L +++G
Sbjct: 273 DVWSSCCMMLHMLNG 287
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 98/237 (41%), Gaps = 81/237 (34%)
Query: 61 GGFGPVFKGK-LDDGREIAVKKLS--HSSN------------------QGKKEF----EN 95
GG+ P FKG+ D R I V+KL H S +G K + E+
Sbjct: 5 GGYHPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAED 64
Query: 96 EAKLLARVQH-----------RNVVNLLGYCAH----GAEKLLIYEYVINESLDKVLFSL 140
E KLL RV +++ LL + H G ++++E V+ E+L +L
Sbjct: 65 EIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFE-VLGENL----LAL 119
Query: 141 IKD-----IQILFRKK-------------------KTDIKASNILLDDKWIP------KI 170
IK I +++ K+ TDIK N+L++ P KI
Sbjct: 120 IKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKI 179
Query: 171 ADFGMARLFPEDQTH-VNTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVVILELISG 226
AD G A + E T+ + TR Y +PE ++ AD++S +I ELI+G
Sbjct: 180 ADLGNACWYDEHYTNSIQTR-----EYRSPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 100/249 (40%), Gaps = 40/249 (16%)
Query: 9 DGLLKH------FNLGSSREGDNEEDLEKIAAREQKHFPFEALVSATKN-FHPSNKLGEG 61
DGL K F GS + E++E ++ + KH T N F LG+G
Sbjct: 108 DGLKKQAAAEMDFRSGSPSDNSGAEEME-VSLAKPKH-------RVTMNEFEYLKLLGKG 159
Query: 62 GFGPVFKGKLD-DGREIAVKKLSHSSNQGKKEFEN---EAKLLARVQHRNVVNLLGYCAH 117
FG V K GR A+K L K E + E ++L +H + L Y
Sbjct: 160 TFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH-PFLTALKYSFQ 218
Query: 118 GAEKL-LIYEYVINESL------------DKVLF---SLIKDIQILFRKKKT---DIKAS 158
++L + EY L D+ F ++ + L +K D+K
Sbjct: 219 THDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLE 278
Query: 159 NILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFGV 218
N++LD KI DFG+ + +D + T GT Y+APE + D + GV
Sbjct: 279 NLMLDKDGHIKITDFGLCKEGIKDGATMKT-FCGTPEYLAPEVLEDNDYGRAVDWWGLGV 337
Query: 219 VILELISGQ 227
V+ E++ G+
Sbjct: 338 VMYEMMCGR 346
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 35/177 (19%)
Query: 76 EIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVINES--- 132
E AVK + S +E E LL QH N++ L G Y YV+ E
Sbjct: 49 EFAVKIIDKSKRDPTEEIE---ILLRYGQHPNIITLKDVYDDGK-----YVYVVTELXKG 100
Query: 133 ---LDKVL----FSLIKDIQILFRKKKT------------DIKASNIL-LDDKWIP---K 169
LDK+L FS + +LF KT D+K SNIL +D+ P +
Sbjct: 101 GELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIR 160
Query: 170 IADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVVILELISG 226
I DFG A+ + + T N ++APE + D++S GV++ ++G
Sbjct: 161 ICDFGFAKQLRAENGLLXTPCYTAN-FVAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 100/249 (40%), Gaps = 40/249 (16%)
Query: 9 DGLLKH------FNLGSSREGDNEEDLEKIAAREQKHFPFEALVSATKN-FHPSNKLGEG 61
DGL K F GS + E++E ++ + KH T N F LG+G
Sbjct: 111 DGLKKQEEEEMDFRSGSPSDNSGAEEME-VSLAKPKH-------RVTMNEFEYLKLLGKG 162
Query: 62 GFGPVFKGKLD-DGREIAVKKLSHSSNQGKKEFEN---EAKLLARVQHRNVVNLLGYCAH 117
FG V K GR A+K L K E + E ++L +H + L Y
Sbjct: 163 TFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH-PFLTALKYSFQ 221
Query: 118 GAEKL-LIYEYVINESL------------DKVLF---SLIKDIQILFRKKKT---DIKAS 158
++L + EY L D+ F ++ + L +K D+K
Sbjct: 222 THDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLE 281
Query: 159 NILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFGV 218
N++LD KI DFG+ + +D + T GT Y+APE + D + GV
Sbjct: 282 NLMLDKDGHIKITDFGLCKEGIKDGATMKT-FCGTPEYLAPEVLEDNDYGRAVDWWGLGV 340
Query: 219 VILELISGQ 227
V+ E++ G+
Sbjct: 341 VMYEMMCGR 349
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 82/195 (42%), Gaps = 32/195 (16%)
Query: 57 KLGEGGFGPVFKGKLDD---GREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLG 113
+LG G FG V + ++D G + AVKK+ + + E A + +V L G
Sbjct: 81 RLGRGSFGEVHR--MEDKQTGFQCAVKKVRLEVFRAE-----ELMACAGLTSPRIVPLYG 133
Query: 114 YCAHGAEKLLIYEYVINESL------------DKVLFSL---IKDIQILFRKK--KTDIK 156
G + E + SL D+ L+ L ++ ++ L ++ D+K
Sbjct: 134 AVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVK 193
Query: 157 ASNILLD-DKWIPKIADFGMARLFPEDQTH----VNTRVAGTNGYMAPEYVMHGHLSVKA 211
A N+LL D + DFG A D + GT +MAPE V+ K
Sbjct: 194 ADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKV 253
Query: 212 DVFSFGVVILELISG 226
DV+S ++L +++G
Sbjct: 254 DVWSSCCMMLHMLNG 268
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 90/215 (41%), Gaps = 32/215 (14%)
Query: 57 KLGEGGFGPVFK-GKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYC 115
+LG G FG V + + G A K + K+ E + ++ ++H +VNL
Sbjct: 164 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 223
Query: 116 AHGAEKLLIYEYVI-NESLDKVL---FSLIKDIQILFRKK--------------KTDIKA 157
E ++IYE++ E +KV + +D + + ++ D+K
Sbjct: 224 EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKP 283
Query: 158 SNILLDDKWIP--KIADFGM-ARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVF 214
NI+ K K+ DFG+ A L P+ V T GT + APE + D++
Sbjct: 284 ENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVGYYTDMW 340
Query: 215 SFGVVILELISGQRNSSFNLDVDAQNL-----LDW 244
S GV+ L+SG S F + D + L DW
Sbjct: 341 SVGVLSYILLSGL--SPFGGENDDETLRNVKSCDW 373
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 154 DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADV 213
DIK N++LD KI DFG+ + D + T GT Y+APE + D
Sbjct: 130 DIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYLAPEVLEDNDYGRAVDW 188
Query: 214 FSFGVVILELISGQ 227
+ GVV+ E++ G+
Sbjct: 189 WGLGVVMYEMMCGR 202
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 154 DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADV 213
DIK N++LD KI DFG+ + D + T GT Y+APE + D
Sbjct: 133 DIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYLAPEVLEDNDYGRAVDW 191
Query: 214 FSFGVVILELISGQ 227
+ GVV+ E++ G+
Sbjct: 192 WGLGVVMYEMMCGR 205
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 83/199 (41%), Gaps = 28/199 (14%)
Query: 50 KNFHPSNKLGEGGFGPVFKGKLDDGREIAVKKLS---HSSNQGKKEFENEAKLLARVQHR 106
+N P +G + L+ R +A+KKLS + K+ + E L+ V H+
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHK 83
Query: 107 NVVNLLG-YCAHGAEKLLIYEYVINESLDKVLFSLIKD-----------IQILFRKKKT- 153
N++ LL + + + Y++ E +D L +I+ Q+L K
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 154 -------DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGH 206
D+K SNI++ KI DFG+AR + + T Y APE ++
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMEPEVVTRYYRAPEVILGMG 201
Query: 207 LSVKADVFSFGVVILELIS 225
D++S G ++ E++
Sbjct: 202 YKENVDLWSVGCIMGEMVC 220
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 82/192 (42%), Gaps = 25/192 (13%)
Query: 57 KLGEGGFGPVFK-GKLDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYC 115
+LG G FG V + + G A K + K+ E + ++ ++H +VNL
Sbjct: 58 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 117
Query: 116 AHGAEKLLIYEYVI-NESLDKVL---FSLIKDIQILFRKK--------------KTDIKA 157
E ++IYE++ E +KV + +D + + ++ D+K
Sbjct: 118 EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKP 177
Query: 158 SNILLDDKWIP--KIADFGM-ARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVF 214
NI+ K K+ DFG+ A L P+ V T GT + APE + D++
Sbjct: 178 ENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVGYYTDMW 234
Query: 215 SFGVVILELISG 226
S GV+ L+SG
Sbjct: 235 SVGVLSYILLSG 246
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 154 DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADV 213
DIK N++LD KI DFG+ + D + T GT Y+APE + D
Sbjct: 130 DIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYLAPEVLEDNDYGRAVDW 188
Query: 214 FSFGVVILELISGQ 227
+ GVV+ E++ G+
Sbjct: 189 WGLGVVMYEMMCGR 202
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 79/193 (40%), Gaps = 28/193 (14%)
Query: 57 KLGEGGFGPVFKGK-LDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYC 115
+LG G FG V + K G + AVKK+ + E A + +V L G
Sbjct: 79 RLGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAV 133
Query: 116 AHGAEKLLIYEYVINESL------------DKVLFSL---IKDIQILFRKK--KTDIKAS 158
G + E + SL D+ L+ L ++ ++ L ++ D+KA
Sbjct: 134 REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKAD 193
Query: 159 NILLD-DKWIPKIADFGMARLFPED----QTHVNTRVAGTNGYMAPEYVMHGHLSVKADV 213
N+LL D + DFG A D + GT +MAPE VM K D+
Sbjct: 194 NVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDI 253
Query: 214 FSFGVVILELISG 226
+S ++L +++G
Sbjct: 254 WSSCCMMLHMLNG 266
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 10/80 (12%)
Query: 154 DIKASNILLDDKWIPKIADFGMA-RLFPEDQTHVNTRVAGTNGYMAPEYVM------HGH 206
D+K NILLDD K+ DFG + +L P ++ V GT Y+APE + H
Sbjct: 136 DLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---EVCGTPSYLAPEIIECSMNDNHPG 192
Query: 207 LSVKADVFSFGVVILELISG 226
+ D++S GV++ L++G
Sbjct: 193 YGKEVDMWSTGVIMYTLLAG 212
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 98/225 (43%), Gaps = 39/225 (17%)
Query: 28 DLEKIAAREQKHFPFEALVSATKNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKKLSHSS 86
+LE +AA E ++ ++ + + LG G FG V+ + +E+ VK +
Sbjct: 11 ELEGLAACEGEY---------SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEK 61
Query: 87 NQGKKEFEN--------EAKLLARVQHRNVVNLL------GYCAHGAEK----LLIYEYV 128
E+ E +L+RV+H N++ +L G+ EK L ++ ++
Sbjct: 62 VLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFI 121
Query: 129 -----INESLDKVLFSLIKDIQILFRKKKT---DIKASNILLDDKWIPKIADFGMARLFP 180
++E L +F + R K DIK NI++ + + K+ DFG A
Sbjct: 122 DRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYL- 180
Query: 181 EDQTHVNTRVAGTNGYMAPEYVM-HGHLSVKADVFSFGVVILELI 224
++ + GT Y APE +M + + + +++S GV + L+
Sbjct: 181 -ERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLV 224
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 15/105 (14%)
Query: 129 INESLDKVLFSLIKDIQILFRKKKTDIKASNILLDDKWIPKIADFGMA-RLFPEDQTHVN 187
I +L +V+ +L K + I+ R D+K NILLDD K+ DFG + +L P ++
Sbjct: 129 IMRALLEVICALHK-LNIVHR----DLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR-- 181
Query: 188 TRVAGTNGYMAPEYVM------HGHLSVKADVFSFGVVILELISG 226
V GT Y+APE + H + D++S GV++ L++G
Sbjct: 182 -EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 15/105 (14%)
Query: 129 INESLDKVLFSLIKDIQILFRKKKTDIKASNILLDDKWIPKIADFGMA-RLFPEDQTHVN 187
I +L +V+ +L K + I+ R D+K NILLDD K+ DFG + +L P ++
Sbjct: 129 IMRALLEVICALHK-LNIVHR----DLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR-- 181
Query: 188 TRVAGTNGYMAPEYVM------HGHLSVKADVFSFGVVILELISG 226
V GT Y+APE + H + D++S GV++ L++G
Sbjct: 182 -SVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 154 DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVM-----HGHLS 208
DIK N+LLD ++ADFG +D T ++ GT Y++PE + G
Sbjct: 216 DIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYG 275
Query: 209 VKADVFSFGVVILELISGQ 227
+ D +S GV + E++ G+
Sbjct: 276 PECDWWSLGVCMYEMLYGE 294
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 79/193 (40%), Gaps = 28/193 (14%)
Query: 57 KLGEGGFGPVFKGK-LDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYC 115
++G G FG V + K G + AVKK+ + E A + +V L G
Sbjct: 65 RVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAV 119
Query: 116 AHGAEKLLIYEYVINESL------------DKVLFSL---IKDIQILFRKK--KTDIKAS 158
G + E + SL D+ L+ L ++ ++ L ++ D+KA
Sbjct: 120 REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKAD 179
Query: 159 NILLD-DKWIPKIADFGMARLFPED----QTHVNTRVAGTNGYMAPEYVMHGHLSVKADV 213
N+LL D + DFG A D + GT +MAPE VM K D+
Sbjct: 180 NVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDI 239
Query: 214 FSFGVVILELISG 226
+S ++L +++G
Sbjct: 240 WSSCCMMLHMLNG 252
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 154 DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVM-----HGHLS 208
DIK N+LLD ++ADFG +D T ++ GT Y++PE + G
Sbjct: 200 DIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYG 259
Query: 209 VKADVFSFGVVILELISGQ 227
+ D +S GV + E++ G+
Sbjct: 260 PECDWWSLGVCMYEMLYGE 278
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 82/204 (40%), Gaps = 35/204 (17%)
Query: 51 NFHPSNKLGEGGFGPVFKGKLDDGREI--AVKKLSHSSNQGKKE----FENEAKLLARVQ 104
+FH +G+G FG V + E+ AVK L + KKE LL V+
Sbjct: 39 DFHFLKVIGKGSFGKVLLAR-HKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK 97
Query: 105 HRNVVNLLGYCAHGAEKL-LIYEYVINESLDKVL---------------------FSLIK 142
H +V L + A+KL + +Y+ L L +
Sbjct: 98 HPFLVGL-HFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLH 156
Query: 143 DIQILFRKKKTDIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYV 202
+ I++R D+K NILLD + + DFG+ + E + +T GT Y+APE +
Sbjct: 157 SLNIVYR----DLKPENILLDSQGHIVLTDFGLCKENIEHNSTTST-FCGTPEYLAPEVL 211
Query: 203 MHGHLSVKADVFSFGVVILELISG 226
D + G V+ E++ G
Sbjct: 212 HKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 89/217 (41%), Gaps = 52/217 (23%)
Query: 56 NKLGEGGFGPVFKGKLDD---GREIAVKKLSHSSNQGKKEFENEAKLLARVQHRN----- 107
+ LGEG FG V + +D GR +AVK + + ++ + +E ++L + +
Sbjct: 20 DTLGEGAFGKVVEC-IDHKAGGRHVAVK-IVKNVDRYCEAARSEIQVLEHLNTTDPNSTF 77
Query: 108 -VVNLLGYCAHGAEKLLIYEYVINESLD----------------KVLFSLIKDIQILFRK 150
V +L + H +++E + + D K+ + + K + L
Sbjct: 78 RCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN 137
Query: 151 K--KTDIKASNILL-----DDKWIPKI--------------ADFGMARLFPEDQTHVNTR 189
K TD+K NIL + + PKI DFG A D H +T
Sbjct: 138 KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATY---DDEHHSTL 194
Query: 190 VAGTNGYMAPEYVMHGHLSVKADVFSFGVVILELISG 226
V+ T Y APE ++ S DV+S G +++E G
Sbjct: 195 VS-TRHYRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 79/193 (40%), Gaps = 28/193 (14%)
Query: 57 KLGEGGFGPVFKGK-LDDGREIAVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLGYC 115
++G G FG V + K G + AVKK+ + E A + +V L G
Sbjct: 81 RVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAV 135
Query: 116 AHGAEKLLIYEYVINESL------------DKVLFSL---IKDIQILFRKK--KTDIKAS 158
G + E + SL D+ L+ L ++ ++ L ++ D+KA
Sbjct: 136 REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKAD 195
Query: 159 NILLD-DKWIPKIADFGMARLFPED----QTHVNTRVAGTNGYMAPEYVMHGHLSVKADV 213
N+LL D + DFG A D + GT +MAPE VM K D+
Sbjct: 196 NVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDI 255
Query: 214 FSFGVVILELISG 226
+S ++L +++G
Sbjct: 256 WSSCCMMLHMLNG 268
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 84/208 (40%), Gaps = 26/208 (12%)
Query: 44 ALVSATKN-FHPSNKLGEGGFGPVFKGKLD-DGREIAVKKLSHSSNQGKKEFEN---EAK 98
A+ T N F LG+G FG V K GR A+K L K E + E +
Sbjct: 2 AMARVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR 61
Query: 99 LLARVQHRNVVNLLGYCAHGAEKL-LIYEYVINESL------------DKVLF---SLIK 142
+L +H + L Y ++L + EY L D+ F ++
Sbjct: 62 VLQNSRH-PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVS 120
Query: 143 DIQILFRKKKT---DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAP 199
+ L +K D+K N++LD KI DFG+ + +D + GT Y+AP
Sbjct: 121 ALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX-FCGTPEYLAP 179
Query: 200 EYVMHGHLSVKADVFSFGVVILELISGQ 227
E + D + GVV+ E++ G+
Sbjct: 180 EVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 91/220 (41%), Gaps = 36/220 (16%)
Query: 42 FEALVSATKNFHPSNKLGEGGFGPVFKGKL--DDGR--EIAVKKLSHS--SNQGKKEFEN 95
E ++ + F LG+G FG V + +L +DG ++AVK L ++ +EF
Sbjct: 15 LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLR 74
Query: 96 EAKLLARVQHRNVVNLLG-------------------YCAHGAEKLLIYEYVINE----- 131
EA + H +V L+G + HG + I E
Sbjct: 75 EAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNL 134
Query: 132 ---SLDKVLFSLIKDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMAR-LFPEDQTH 185
+L + + + ++ L + D+ A N +L + +ADFG++R ++ D
Sbjct: 135 PLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYR 194
Query: 186 VNTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVVILELIS 225
++A E + +V +DV++FGV + E+++
Sbjct: 195 QGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 154 DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADV 213
DIK N++LD KI DFG+ + D + GT Y+APE + D
Sbjct: 135 DIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX-FCGTPEYLAPEVLEDNDYGRAVDW 193
Query: 214 FSFGVVILELISGQ 227
+ GVV+ E++ G+
Sbjct: 194 WGLGVVMYEMMCGR 207
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 154 DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADV 213
DIK N++LD KI DFG+ + D + GT Y+APE + D
Sbjct: 130 DIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX-FCGTPEYLAPEVLEDNDYGRAVDW 188
Query: 214 FSFGVVILELISGQ 227
+ GVV+ E++ G+
Sbjct: 189 WGLGVVMYEMMCGR 202
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 154 DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADV 213
DIK N++LD KI DFG+ + D + GT Y+APE + D
Sbjct: 130 DIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX-FCGTPEYLAPEVLEDNDYGRAVDW 188
Query: 214 FSFGVVILELISGQ 227
+ GVV+ E++ G+
Sbjct: 189 WGLGVVMYEMMCGR 202
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 154 DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADV 213
DIK N++LD KI DFG+ + D + GT Y+APE + D
Sbjct: 130 DIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX-FCGTPEYLAPEVLEDNDYGRAVDW 188
Query: 214 FSFGVVILELISGQ 227
+ GVV+ E++ G+
Sbjct: 189 WGLGVVMYEMMCGR 202
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 69/163 (42%), Gaps = 27/163 (16%)
Query: 89 GKKEFENEAKLLARVQHRNVVNLLG--YCAHGAEKLLIYEYVI---NESLDKV------- 136
G+ + E +LL R++H+NV+ L+ Y + ++ EY + E LD V
Sbjct: 49 GEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPV 108
Query: 137 ------LFSLIKDIQILFRKK--KTDIKASNILLDDKWIPKIADFGMARL---FPEDQTH 185
LI ++ L + DIK N+LL KI+ G+A F D T
Sbjct: 109 CQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTC 168
Query: 186 VNTRVAGTNGYMAPEYV--MHGHLSVKADVFSFGVVILELISG 226
++ G+ + PE + K D++S GV + + +G
Sbjct: 169 RTSQ--GSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 154 DIKASNILLDDKWIPKIADFGMARLFPED-QTHVNTRVAGTNGYMAPEYVMH----GHLS 208
D+K N+LLD K+ADFG E H +T V GT Y++PE + G+
Sbjct: 199 DVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV-GTPDYISPEVLKSQGGDGYYG 257
Query: 209 VKADVFSFGVVILELISG 226
+ D +S GV + E++ G
Sbjct: 258 RECDWWSVGVFLFEMLVG 275
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 154 DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADV 213
D+K N++LD KI DFG+ + +D + GT Y+APE + D
Sbjct: 134 DLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX-FCGTPEYLAPEVLEDNDYGRAVDW 192
Query: 214 FSFGVVILELISGQ 227
+ GVV+ E++ G+
Sbjct: 193 WGLGVVMYEMMCGR 206
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 154 DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADV 213
D+K N++LD KI DFG+ + +D + GT Y+APE + D
Sbjct: 136 DLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX-FCGTPEYLAPEVLEDNDYGRAVDW 194
Query: 214 FSFGVVILELISGQ 227
+ GVV+ E++ G+
Sbjct: 195 WGLGVVMYEMMCGR 208
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 119/283 (42%), Gaps = 72/283 (25%)
Query: 42 FEALVSATKNFHPSNKLGEGGFGPVFKGKLDDGREI-AVK--KLSHSSNQGKKEFENEAK 98
F+++ + + ++G GG VF+ L++ ++I A+K L + NQ + NE
Sbjct: 20 FQSMSVKGRIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIA 78
Query: 99 LLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFSLIK----DIQILFRKKKT- 153
L ++Q H + + +Y+Y E D+ ++ +++ D+ +KKK+
Sbjct: 79 YLNKLQQ-----------HSDKIIRLYDY---EITDQYIYMVMECGNIDLNSWLKKKKSI 124
Query: 154 ---------------------------DIKASNILLDDKWIPKIADFGMA-RLFPEDQTH 185
D+K +N L+ D + K+ DFG+A ++ P+ +
Sbjct: 125 DPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSV 183
Query: 186 VNTRVAGTNGYMAPEYVMHGHLS-----------VKADVFSFGVVILELISGQRNSSFNL 234
V GT YM PE + S K+DV+S G ++ + G+ + F
Sbjct: 184 VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK--TPF-- 239
Query: 235 DVDAQNLLDWAYKLYK-KDKSLEIVDPSLAASDSGDQIAMCIQ 276
Q +++ KL+ D + EI P + D D + C++
Sbjct: 240 ----QQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLK 278
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 113/268 (42%), Gaps = 72/268 (26%)
Query: 57 KLGEGGFGPVFKGKLDDGREI-AVK--KLSHSSNQGKKEFENEAKLLARVQHRNVVNLLG 113
++G GG VF+ L++ ++I A+K L + NQ + NE L ++Q
Sbjct: 19 QIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ-------- 69
Query: 114 YCAHGAEKLLIYEYVINESLDKVLFSLIK----DIQILFRKKKT---------------- 153
H + + +Y+Y E D+ ++ +++ D+ +KKK+
Sbjct: 70 ---HSDKIIRLYDY---EITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEA 123
Query: 154 ------------DIKASNILLDDKWIPKIADFGMA-RLFPEDQTHVNTRVAGTNGYMAPE 200
D+K +N L+ D + K+ DFG+A ++ P+ + V GT YM PE
Sbjct: 124 VHTIHQHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 182
Query: 201 YVMHGHLS-----------VKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLY 249
+ S K+DV+S G ++ + G+ + F Q +++ KL+
Sbjct: 183 AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK--TPF------QQIINQISKLH 234
Query: 250 K-KDKSLEIVDPSLAASDSGDQIAMCIQ 276
D + EI P + D D + C++
Sbjct: 235 AIIDPNHEIEFPDIPEKDLQDVLKCCLK 262
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 113/268 (42%), Gaps = 72/268 (26%)
Query: 57 KLGEGGFGPVFKGKLDDGREI-AVK--KLSHSSNQGKKEFENEAKLLARVQHRNVVNLLG 113
++G GG VF+ L++ ++I A+K L + NQ + NE L ++Q
Sbjct: 63 QIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ-------- 113
Query: 114 YCAHGAEKLLIYEYVINESLDKVLFSLIK----DIQILFRKKKT---------------- 153
H + + +Y+Y I D+ ++ +++ D+ +KKK+
Sbjct: 114 ---HSDKIIRLYDYEIT---DQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEA 167
Query: 154 ------------DIKASNILLDDKWIPKIADFGMA-RLFPEDQTHVNTRVAGTNGYMAPE 200
D+K +N L+ D + K+ DFG+A ++ P+ + V GT YM PE
Sbjct: 168 VHTIHQHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 226
Query: 201 YVMHGHLS-----------VKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLY 249
+ S K+DV+S G ++ + G+ + F Q +++ KL+
Sbjct: 227 AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK--TPF------QQIINQISKLH 278
Query: 250 K-KDKSLEIVDPSLAASDSGDQIAMCIQ 276
D + EI P + D D + C++
Sbjct: 279 AIIDPNHEIEFPDIPEKDLQDVLKCCLK 306
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 113/268 (42%), Gaps = 72/268 (26%)
Query: 57 KLGEGGFGPVFKGKLDDGREI-AVK--KLSHSSNQGKKEFENEAKLLARVQHRNVVNLLG 113
++G GG VF+ L++ ++I A+K L + NQ + NE L ++Q
Sbjct: 63 QIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ-------- 113
Query: 114 YCAHGAEKLLIYEYVINESLDKVLFSLIK----DIQILFRKKKT---------------- 153
H + + +Y+Y I D+ ++ +++ D+ +KKK+
Sbjct: 114 ---HSDKIIRLYDYEIT---DQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEA 167
Query: 154 ------------DIKASNILLDDKWIPKIADFGMA-RLFPEDQTHVNTRVAGTNGYMAPE 200
D+K +N L+ D + K+ DFG+A ++ P+ + V GT YM PE
Sbjct: 168 VHTIHQHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 226
Query: 201 YVMHGHLS-----------VKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLY 249
+ S K+DV+S G ++ + G+ + F Q +++ KL+
Sbjct: 227 AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK--TPF------QQIINQISKLH 278
Query: 250 K-KDKSLEIVDPSLAASDSGDQIAMCIQ 276
D + EI P + D D + C++
Sbjct: 279 AIIDPNHEIEFPDIPEKDLQDVLKCCLK 306
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 113/268 (42%), Gaps = 72/268 (26%)
Query: 57 KLGEGGFGPVFKGKLDDGREI-AVK--KLSHSSNQGKKEFENEAKLLARVQHRNVVNLLG 113
++G GG VF+ L++ ++I A+K L + NQ + NE L ++Q
Sbjct: 15 QIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ-------- 65
Query: 114 YCAHGAEKLLIYEYVINESLDKVLFSLIK----DIQILFRKKKT---------------- 153
H + + +Y+Y E D+ ++ +++ D+ +KKK+
Sbjct: 66 ---HSDKIIRLYDY---EITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEA 119
Query: 154 ------------DIKASNILLDDKWIPKIADFGMA-RLFPEDQTHVNTRVAGTNGYMAPE 200
D+K +N L+ D + K+ DFG+A ++ P+ + V GT YM PE
Sbjct: 120 VHTIHQHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 178
Query: 201 YVMHGHLS-----------VKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLY 249
+ S K+DV+S G ++ + G+ + F Q +++ KL+
Sbjct: 179 AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK--TPF------QQIINQISKLH 230
Query: 250 K-KDKSLEIVDPSLAASDSGDQIAMCIQ 276
D + EI P + D D + C++
Sbjct: 231 AIIDPNHEIEFPDIPEKDLQDVLKCCLK 258
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 111/268 (41%), Gaps = 72/268 (26%)
Query: 57 KLGEGGFGPVFKGKLDDGREI-AVK--KLSHSSNQGKKEFENEAKLLARVQHRNVVNLLG 113
++G GG VF+ L++ ++I A+K L + NQ + NE L ++Q
Sbjct: 16 QIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ-------- 66
Query: 114 YCAHGAEKLLIYEYVINESLDKVLFSLIK----DIQILFRKKKT---------------- 153
H + + +Y+Y E D+ ++ +++ D+ +KKK+
Sbjct: 67 ---HSDKIIRLYDY---EITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEA 120
Query: 154 ------------DIKASNILLDDKWIPKIADFGMA-RLFPEDQTHVNTRVAGTNGYMAPE 200
D+K +N L+ D + K+ DFG+A ++ P+ + V GT YM PE
Sbjct: 121 VHTIHQHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 179
Query: 201 YVMHGHLS-----------VKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLY 249
+ S K+DV+S G ++ + G+ Q +++ KL+
Sbjct: 180 AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK--------TPFQQIINQISKLH 231
Query: 250 K-KDKSLEIVDPSLAASDSGDQIAMCIQ 276
D + EI P + D D + C++
Sbjct: 232 AIIDPNHEIEFPDIPEKDLQDVLKCCLK 259
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 118/283 (41%), Gaps = 72/283 (25%)
Query: 42 FEALVSATKNFHPSNKLGEGGFGPVFKGKLDDGREI-AVK--KLSHSSNQGKKEFENEAK 98
F+++ + + ++G GG VF+ L++ ++I A+K L + NQ + NE
Sbjct: 20 FQSMSVKGRIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIA 78
Query: 99 LLARVQHRNVVNLLGYCAHGAEKLLIYEYVINESLDKVLFSLIK----DIQILFRKKKT- 153
L ++Q H + + +Y+Y E D+ ++ +++ D+ +KKK+
Sbjct: 79 YLNKLQQ-----------HSDKIIRLYDY---EITDQYIYMVMECGNIDLNSWLKKKKSI 124
Query: 154 ---------------------------DIKASNILLDDKWIPKIADFGMA-RLFPEDQTH 185
D+K +N L+ D + K+ DFG+A ++ P+
Sbjct: 125 DPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDXXXV 183
Query: 186 VNTRVAGTNGYMAPEYVMHGHLS-----------VKADVFSFGVVILELISGQRNSSFNL 234
V GT YM PE + S K+DV+S G ++ + G+ + F
Sbjct: 184 VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK--TPF-- 239
Query: 235 DVDAQNLLDWAYKLYK-KDKSLEIVDPSLAASDSGDQIAMCIQ 276
Q +++ KL+ D + EI P + D D + C++
Sbjct: 240 ----QQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLK 278
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 85/203 (41%), Gaps = 39/203 (19%)
Query: 58 LGEGGFGPVFKG-KLDDGREIAVK-----KLSHSSNQGKKEFENEAKLLARVQHRNVVNL 111
+G+G F V + + G++ AVK K + S ++ + EA + ++H ++V L
Sbjct: 34 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 93
Query: 112 LGYCAHGAEKLLIYEY-----------------------VINESLDKVLFSL--IKDIQI 146
L + +++E+ V + + ++L +L D I
Sbjct: 94 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNI 153
Query: 147 LFRKKKTDIKASNILLDDK--WIP-KIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVM 203
+ R D+K +LL K P K+ FG+A E RV GT +MAPE V
Sbjct: 154 IHR----DVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV-GTPHFMAPEVVK 208
Query: 204 HGHLSVKADVFSFGVVILELISG 226
DV+ GV++ L+SG
Sbjct: 209 REPYGKPVDVWGCGVILFILLSG 231
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 88/217 (40%), Gaps = 52/217 (23%)
Query: 56 NKLGEGGFGPVFKGKLDD---GREIAVKKLSHSSNQGKKEFENEAKLLARVQHRN----- 107
+ LGEG FG V + +D GR +AVK + + ++ + +E ++L + +
Sbjct: 20 DTLGEGAFGKVVEC-IDHKAGGRHVAVK-IVKNVDRYCEAARSEIQVLEHLNTTDPNSTF 77
Query: 108 -VVNLLGYCAHGAEKLLIYEYVINESLD----------------KVLFSLIKDIQILFRK 150
V +L + H +++E + + D K+ + + K + L
Sbjct: 78 RCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN 137
Query: 151 K--KTDIKASNILL-----DDKWIPKI--------------ADFGMARLFPEDQTHVNTR 189
K TD+K NIL + + PKI DFG A D H +T
Sbjct: 138 KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATY---DDEHHSTL 194
Query: 190 VAGTNGYMAPEYVMHGHLSVKADVFSFGVVILELISG 226
V + Y APE ++ S DV+S G +++E G
Sbjct: 195 VXXRH-YRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 82/202 (40%), Gaps = 39/202 (19%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAV-------KKLSHSSNQGKKEFENEAKLLARVQHRNVV 109
++G G F V+KG LD + V +KL+ S Q F+ EA+ L +QH N+V
Sbjct: 33 EIGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQ---RFKEEAEXLKGLQHPNIV 88
Query: 110 NLLGYCAHGAEK----LLIYEYVINESLD-----------KVLFS----LIKDIQILFRK 150
+ +L+ E + +L KVL S ++K +Q L +
Sbjct: 89 RFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTR 148
Query: 151 K----KTDIKASNILLDD-KWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHG 205
D+K NI + KI D G+A L + V GT + APE
Sbjct: 149 TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL---KRASFAKAVIGTPEFXAPEXYEEK 205
Query: 206 HLSVKADVFSFGVVILELISGQ 227
+ DV++FG LE + +
Sbjct: 206 Y-DESVDVYAFGXCXLEXATSE 226
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 154 DIKASNILLDDKWIPKIADFGMA-RLFPEDQTHVNTRVAGTNGYMAPEYVMH----GHLS 208
D+K N+LLD K+ADFG ++ E +T V GT Y++PE + G+
Sbjct: 193 DVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGYYG 251
Query: 209 VKADVFSFGVVILELISG 226
+ D +S GV + E++ G
Sbjct: 252 RECDWWSVGVFLYEMLVG 269
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 154 DIKASNILLDDKWIPKIADFGMA-RLFPEDQTHVNTRVAGTNGYMAPEYVMH----GHLS 208
D+K N+LLD K+ADFG ++ E +T V GT Y++PE + G+
Sbjct: 198 DVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGYYG 256
Query: 209 VKADVFSFGVVILELISG 226
+ D +S GV + E++ G
Sbjct: 257 RECDWWSVGVFLYEMLVG 274
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 85/203 (41%), Gaps = 39/203 (19%)
Query: 58 LGEGGFGPVFKG-KLDDGREIAVK-----KLSHSSNQGKKEFENEAKLLARVQHRNVVNL 111
+G+G F V + + G++ AVK K + S ++ + EA + ++H ++V L
Sbjct: 32 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 112 LGYCAHGAEKLLIYEY-----------------------VINESLDKVLFSL--IKDIQI 146
L + +++E+ V + + ++L +L D I
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNI 151
Query: 147 LFRKKKTDIKASNILLDDK--WIP-KIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVM 203
+ R D+K +LL K P K+ FG+A E RV GT +MAPE V
Sbjct: 152 IHR----DVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV-GTPHFMAPEVVK 206
Query: 204 HGHLSVKADVFSFGVVILELISG 226
DV+ GV++ L+SG
Sbjct: 207 REPYGKPVDVWGCGVILFILLSG 229
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 126/317 (39%), Gaps = 78/317 (24%)
Query: 42 FEALVSATKNFHPSNKLGEGGFGPVF--KGKLDDGRE--IAVKKLSHSSNQGKKEFENEA 97
+EA+ + F +K+GEG F V+ +L G E IA+K L +S+ + E +
Sbjct: 13 YEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQC 72
Query: 98 KLLARVQHRNVVNLLG--YCAHGAEKLLI-YEYVINESLDKVLFSL----IKDIQI-LFR 149
+A Q N++G YC + ++I Y+ +ES +L SL +++ + LF+
Sbjct: 73 LTVAGGQD----NVMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQEVREYMLNLFK 128
Query: 150 KKK---------TDIKASNILLDDKWIP-KIADFGMAR---------------------- 177
K D+K SN L + + + DFG+A+
Sbjct: 129 ALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERC 188
Query: 178 ------LFPEDQTHVNTRVAGTNGYMAPEYVMHG-HLSVKADVFSFGVVILELISGQRNS 230
+ + V R AGT G+ APE + + + D++S GV+ L L+SG+
Sbjct: 189 SQNKCSICLSRRQQVAPR-AGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGR--- 244
Query: 231 SFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIAMCIQIG--LLCTQGDPQ- 287
Y YK L + + S + I G +LC++ P
Sbjct: 245 ---------------YPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQ 289
Query: 288 -LRPTMRRVVVMLSKKP 303
LR R+ M S P
Sbjct: 290 DLRKLCERLRGMDSSTP 306
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 154 DIKASNILLDDKWIPKIADFGMA-RLFPEDQTHVNTRVAGTNGYMAPEYVMH----GHLS 208
D+K N+LLD K+ADFG ++ E +T V GT Y++PE + G+
Sbjct: 198 DVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGYYG 256
Query: 209 VKADVFSFGVVILELISG 226
+ D +S GV + E++ G
Sbjct: 257 RECDWWSVGVFLYEMLVG 274
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 113/269 (42%), Gaps = 74/269 (27%)
Query: 57 KLGEGGFGPVFKGKLDDGREI-AVK--KLSHSSNQGKKEFENEAKLLARVQHRNVVNLLG 113
++G GG VF+ L++ ++I A+K L + NQ + NE L ++Q
Sbjct: 63 QIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ-------- 113
Query: 114 YCAHGAEKLLIYEYVINESLDKVLFSLIK----DIQILFRKKKT---------------- 153
H + + +Y+Y I D+ ++ +++ D+ +KKK+
Sbjct: 114 ---HSDKIIRLYDYEIT---DQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEA 167
Query: 154 ------------DIKASNILLDDKWIPKIADFGMARLFPEDQTHV--NTRVAGTNGYMAP 199
D+K +N L+ D + K+ DFG+A D T V +++V N YM P
Sbjct: 168 VHTIHQHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGAVN-YMPP 225
Query: 200 EYVMHGHLS-----------VKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKL 248
E + S K+DV+S G ++ + G+ + F Q +++ KL
Sbjct: 226 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK--TPF------QQIINQISKL 277
Query: 249 YK-KDKSLEIVDPSLAASDSGDQIAMCIQ 276
+ D + EI P + D D + C++
Sbjct: 278 HAIIDPNHEIEFPDIPEKDLQDVLKCCLK 306
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 50/113 (44%), Gaps = 11/113 (9%)
Query: 154 DIKASNILLDDKWIPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVM-------HGH 206
DIK NILLD ++ADFG D T + GT Y++PE + G
Sbjct: 187 DIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGS 246
Query: 207 LSVKADVFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVD 259
+ D ++ GV E+ GQ + F D A+ + YK+ SL +VD
Sbjct: 247 YGPECDWWALGVFAYEMFYGQ--TPFYADSTAETYGKIVH--YKEHLSLPLVD 295
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 26/216 (12%)
Query: 33 AAREQKHFPFEALVSATKNFHPSNKLGEGGFGPVFKGKLDDGREI--AVKKLSHSSNQGK 90
+ RE +F + + N +G G +G V K + G I A KK+ +
Sbjct: 9 SGRENLYFQGSTKGDINQYYTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDV 67
Query: 91 KEFENEAKLLARVQHRNVVNLLGYCAHGAEKLLIYEYVI-NESLDKVLFS---------- 139
F+ E +++ + H N++ L + L+ E E ++V+
Sbjct: 68 DRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAAR 127
Query: 140 LIKDI--QILFRKK----KTDIKASNILL--DDKWIP-KIADFGMARLFPEDQTHVNTRV 190
++KD+ + + K D+K N L D P K+ DFG+A F + + T+V
Sbjct: 128 IMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM-MRTKV 186
Query: 191 AGTNGYMAPEYVMHGHLSVKADVFSFGVVILELISG 226
GT Y++P+ V+ G + D +S GV++ L+ G
Sbjct: 187 -GTPYYVSPQ-VLEGLYGPECDEWSAGVMMYVLLCG 220
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 108/269 (40%), Gaps = 40/269 (14%)
Query: 56 NKLGEGGFGPVFKGKLDDGREIAVK--KLSHSSNQGKKEFENEAKLLARVQHRNVVNLLG 113
KL E G ++KG+ G +I VK K+ S + ++F E L H NV+ +LG
Sbjct: 16 TKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLG 74
Query: 114 YCAH--GAEKLLIYEYVINESLDKVLF---SLIKDIQILFRKKKTDIKASNILLD--DKW 166
C LI ++ SL VL + + D Q K D+ L +
Sbjct: 75 ACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVD-QSQAVKFALDMARGMAFLHTLEPL 133
Query: 167 IPKIADFGMARLFPEDQT------HVNTRVAGTNGYMAPEYVMHGHLSVK--------AD 212
IP+ A + + ED T V AP +V L K AD
Sbjct: 134 IPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSAD 193
Query: 213 VFSFGVVILELISGQRNSSFNLDVDAQNLLDWAYKLYKKDKSLEIVDPSLAASDSGDQIA 272
++SF V++ EL++ R F D N ++ K+ +LE + P++ S ++
Sbjct: 194 MWSFAVLLWELVT--REVPF---ADLSN-MEIGMKV-----ALEGLRPTIPPGIS-PHVS 241
Query: 273 MCIQIGLLCTQGDPQLRPTMRRVVVMLSK 301
++I C DP RP +V +L K
Sbjct: 242 KLMKI---CMNEDPAKRPKFDMIVPILEK 267
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 46/110 (41%), Gaps = 25/110 (22%)
Query: 138 FSLIKDIQILFRKK--KTDIKASNILL---------------DDKWIP----KIADFGMA 176
F L + ++ L K TD+K NIL D++ + ++ DFG A
Sbjct: 144 FQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSA 203
Query: 177 RLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVVILELISG 226
D H +T + T Y APE ++ S DV+S G +I E G
Sbjct: 204 TF---DHEHHST-IVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVG 249
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 26/193 (13%)
Query: 56 NKLGEGGFGPVFKGKLDDGREI--AVKKLSHSSNQGKKEFENEAKLLARVQHRNVVNLLG 113
N +G G +G V K + G I A KK+ + F+ E +++ + H N++ L
Sbjct: 15 NTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE 73
Query: 114 YCAHGAEKLLIYEYVI-NESLDKVLFS----------LIKDI--QILFRKK----KTDIK 156
+ L+ E E ++V+ ++KD+ + + K D+K
Sbjct: 74 TFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLK 133
Query: 157 ASNILL--DDKWIP-KIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADV 213
N L D P K+ DFG+A F + + T+V GT Y++P+ V+ G + D
Sbjct: 134 PENFLFLTDSPDSPLKLIDFGLAARFKPGKM-MRTKV-GTPYYVSPQ-VLEGLYGPECDE 190
Query: 214 FSFGVVILELISG 226
+S GV++ L+ G
Sbjct: 191 WSAGVMMYVLLCG 203
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 35/206 (16%)
Query: 57 KLGEGGFGPVFKGKLDDGREIAVKKLSHSSNQG-KKEFENEAKLLARVQHRNVVNLLG-Y 114
K+G G +G V+K K DG++ L G E LL ++H NV++L +
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVF 87
Query: 115 CAHGAEKL-LIYEYVINE-----------------------SLDKVLFSLIKDIQILFRK 150
+H K+ L+++Y ++ + +L+ ++ I L
Sbjct: 88 LSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN 147
Query: 151 K--KTDIKASNILL----DDKWIPKIADFGMARLF--PEDQTHVNTRVAGTNGYMAPEYV 202
D+K +NIL+ ++ KIAD G ARLF P V T Y APE +
Sbjct: 148 WVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELL 207
Query: 203 MHG-HLSVKADVFSFGVVILELISGQ 227
+ H + D+++ G + EL++ +
Sbjct: 208 LGARHYTKAIDIWAIGCIFAELLTSE 233
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 13/98 (13%)
Query: 154 DIKASNILLDDKWIP----KIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSV 209
D+K NILL + P KI DFGM+R + GT Y+APE + + ++
Sbjct: 156 DLKPQNILLSSIY-PLGDIKIVDFGMSRKI--GHACELREIMGTPEYLAPEILNYDPITT 212
Query: 210 KADVFSFGVVILELIS------GQRNSSFNLDVDAQNL 241
D+++ G++ L++ G+ N L++ N+
Sbjct: 213 ATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNV 250
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 35.0 bits (79), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 91/202 (45%), Gaps = 36/202 (17%)
Query: 57 KLGEGGFGPVFKG-KLDDGREIAVKKLSHSSN--QGKKEFENEAKLLARVQHRNVVNLLG 113
++GEG FG +F+G L + +++A+K S+ Q + E+ KLLA + N+
Sbjct: 16 RIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRT-YKLLAGCT--GIPNVYY 72
Query: 114 YCAHGAEKLLIYEYVINESLDKVL------FS----------LIKDIQILFRKKKT--DI 155
+ G +L+ + ++ SL+ +L FS ++ +Q + K DI
Sbjct: 73 FGQEGLHNVLVID-LLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDI 131
Query: 156 KASNILL-----DDKWIPKIADFGMARLF--PEDQTHVNTR----VAGTNGYMAPEYVMH 204
K N L+ + + + DFGM + + P + H+ R ++GT YM+ +
Sbjct: 132 KPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLG 191
Query: 205 GHLSVKADVFSFGVVILELISG 226
S + D+ + G V + + G
Sbjct: 192 REQSRRDDLEALGHVFMYFLRG 213
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 35.0 bits (79), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 92/202 (45%), Gaps = 36/202 (17%)
Query: 57 KLGEGGFGPVFKG-KLDDGREIAVKKLSHSSN--QGKKEFENEAKLLARVQHRNVVNLLG 113
++GEG FG +F+G L + +++A+K S+ Q + E+ KLLA + N+
Sbjct: 17 RIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRT-YKLLAGCT--GIPNVYY 73
Query: 114 YCAHGAEKLLIYEYVINESLDKVL------FSL----IKDIQILFRKKKT--------DI 155
+ G +L+ + ++ SL+ +L FS+ + Q+L R + DI
Sbjct: 74 FGQEGLHNVLVID-LLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDI 132
Query: 156 KASNILL-----DDKWIPKIADFGMARLF--PEDQTHVNTR----VAGTNGYMAPEYVMH 204
K N L+ + + + DFGM + + P + H+ R ++GT YM+ +
Sbjct: 133 KPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLG 192
Query: 205 GHLSVKADVFSFGVVILELISG 226
S + D+ + G V + + G
Sbjct: 193 REQSRRDDLEALGHVFMYFLRG 214
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 35.0 bits (79), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 87/215 (40%), Gaps = 44/215 (20%)
Query: 49 TKNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKK----LSHSSNQGKKEFENEAKLLARV 103
T FH K+G G FG VFK K DG A+K+ L+ S ++ E A +
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG- 68
Query: 104 QHRNVVNLLG-------------YCAHG------AEKLLIYEYVINESLDKVLFSLIKDI 144
QH +VV YC G +E I Y L +L + + +
Sbjct: 69 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 128
Query: 145 QILFRKK--KTDIKASNILLDDKWIPKIA-------DFGMARLFPE--DQTHVNTRVA-- 191
+ + DIK SNI + IP A D+ ++ + D HV TR++
Sbjct: 129 RYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHV-TRISSP 187
Query: 192 ----GTNGYMAPEYVMHGHLSV-KADVFSFGVVIL 221
G + ++A E + + + KAD+F+ + ++
Sbjct: 188 QVEEGDSRFLANEVLQENYTHLPKADIFALALTVV 222
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 35.0 bits (79), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 87/215 (40%), Gaps = 44/215 (20%)
Query: 49 TKNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKK----LSHSSNQGKKEFENEAKLLARV 103
T FH K+G G FG VFK K DG A+K+ L+ S ++ E A +
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG- 64
Query: 104 QHRNVVNLLG-------------YCAHG------AEKLLIYEYVINESLDKVLFSLIKDI 144
QH +VV YC G +E I Y L +L + + +
Sbjct: 65 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 124
Query: 145 QILFRKK--KTDIKASNILLDDKWIPKIA-------DFGMARLFPE--DQTHVNTRVA-- 191
+ + DIK SNI + IP A D+ ++ + D HV TR++
Sbjct: 125 RYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHV-TRISSP 183
Query: 192 ----GTNGYMAPEYVMHGHLSV-KADVFSFGVVIL 221
G + ++A E + + + KAD+F+ + ++
Sbjct: 184 QVEEGDSRFLANEVLQENYTHLPKADIFALALTVV 218
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 35.0 bits (79), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 87/215 (40%), Gaps = 44/215 (20%)
Query: 49 TKNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKK----LSHSSNQGKKEFENEAKLLARV 103
T FH K+G G FG VFK K DG A+K+ L+ S ++ E A +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG- 66
Query: 104 QHRNVVNLLG-------------YCAHG------AEKLLIYEYVINESLDKVLFSLIKDI 144
QH +VV YC G +E I Y L +L + + +
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 126
Query: 145 QILFRKK--KTDIKASNILLDDKWIPKIA-------DFGMARLFPE--DQTHVNTRVA-- 191
+ + DIK SNI + IP A D+ ++ + D HV TR++
Sbjct: 127 RYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHV-TRISSP 185
Query: 192 ----GTNGYMAPEYVMHGHLSV-KADVFSFGVVIL 221
G + ++A E + + + KAD+F+ + ++
Sbjct: 186 QVEEGDSRFLANEVLQENYTHLPKADIFALALTVV 220
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 35.0 bits (79), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 87/215 (40%), Gaps = 44/215 (20%)
Query: 49 TKNFHPSNKLGEGGFGPVFKG-KLDDGREIAVKK----LSHSSNQGKKEFENEAKLLARV 103
T FH K+G G FG VFK K DG A+K+ L+ S ++ E A +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG- 66
Query: 104 QHRNVVNLLG-------------YCAHG------AEKLLIYEYVINESLDKVLFSLIKDI 144
QH +VV YC G +E I Y L +L + + +
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 126
Query: 145 QILFRKK--KTDIKASNILLDDKWIPKIA-------DFGMARLFPE--DQTHVNTRVA-- 191
+ + DIK SNI + IP A D+ ++ + D HV TR++
Sbjct: 127 RYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHV-TRISSP 185
Query: 192 ----GTNGYMAPEYVMHGHLSV-KADVFSFGVVIL 221
G + ++A E + + + KAD+F+ + ++
Sbjct: 186 QVEEGDSRFLANEVLQENYTHLPKADIFALALTVV 220
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 135 KVLFSLIKDIQILFRKK--KTDIKASNILLDDKWIP--KIADFGMARLFPEDQTHVNTRV 190
K S+++ + L + + D+K NILL + K+ DFG + + V T +
Sbjct: 204 KFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY---EHQRVYTXI 260
Query: 191 AGTNGYMAPEYVMHGHLSVKADVFSFGVVILELISG 226
+ Y APE ++ + D++S G ++ EL++G
Sbjct: 261 Q-SRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 169 KIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVVILELISG 226
++ADFG A D H +T + T Y PE ++ + DV+S G ++ E G
Sbjct: 182 RVADFGSATF---DHEH-HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 235
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 169 KIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVVILELISG 226
++ADFG A D H +T + T Y PE ++ + DV+S G ++ E G
Sbjct: 191 RVADFGSATF---DHEH-HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 244
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 135 KVLFSLIKDIQILFRKK--KTDIKASNILLDDKWIP--KIADFGMARLFPEDQTHVNTRV 190
K S+++ + L + + D+K NILL + K+ DFG + + V T +
Sbjct: 204 KFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY---EHQRVYTXI 260
Query: 191 AGTNGYMAPEYVMHGHLSVKADVFSFGVVILELISG 226
+ Y APE ++ + D++S G ++ EL++G
Sbjct: 261 Q-SRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 154 DIKASNILLDDK---WIPKIADFGMARLFPEDQTHVN-TRVAGTNGYMAPEYVMHGHLSV 209
D+K N+L K I K+ DFG A+ E +H + T T Y+APE +
Sbjct: 140 DVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTEPCYTPYYVAPEVLGPEKYDK 196
Query: 210 KADVFSFGVVILELISG 226
D++S GV++ L+ G
Sbjct: 197 SCDMWSLGVIMYILLCG 213
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.137 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,589,552
Number of Sequences: 62578
Number of extensions: 420216
Number of successful extensions: 3389
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 651
Number of HSP's successfully gapped in prelim test: 381
Number of HSP's that attempted gapping in prelim test: 1331
Number of HSP's gapped (non-prelim): 1210
length of query: 381
length of database: 14,973,337
effective HSP length: 101
effective length of query: 280
effective length of database: 8,652,959
effective search space: 2422828520
effective search space used: 2422828520
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)